[1] | 1 | #column 1 column 2 column 3 |
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| 2 | #name of variable value of variable (~ must not be used) scope |
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| 3 | #---------------------------------------------------------------------------- |
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| 4 | %mainprog palm.f90 |
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[17] | 5 | #%base_directory $HOME/palm/current_version |
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[18] | 6 | #%base_data ~/palm/current_version/JOBS |
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[17] | 7 | #%source_path $base_directory/SOURCE |
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[1] | 8 | %add_source_path $base_directory/USER_CODE/$fname |
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| 9 | %depository_path $base_directory/MAKE_DEPOSITORY |
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| 10 | %use_makefile true |
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| 11 | # |
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| 12 | %remote_username raasch lcmuk parallel |
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| 13 | %tmp_user_catalog /tmp lcmuk parallel |
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| 14 | %compiler_name mpif90 lcmuk parallel |
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| 15 | %fopts -axW:-cpp:-openmp:-r8:-nbs:-convert:little_endian lcmuk parallel |
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| 16 | %lopts -axW:-cpp:-openmp:-r8:-nbs:-Vaxlib lcmuk parallel |
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| 17 | #%hostfile $base_directory/.hostfile lcmuk parallel |
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| 18 | # |
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| 19 | %remote_username raasch lcmuk |
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| 20 | %tmp_user_catalog /tmp lcmuk |
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| 21 | %compiler_name ifort lcmuk |
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| 22 | %fopts -axW:-cpp:-r8:-nbs:-convert:little:endian lcmuk |
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| 23 | %lopts -axW:-cpp:-r8:-nbs:-Vaxlib lcmuk |
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| 24 | # |
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| 25 | %remote_username raasch lcmuk trace |
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| 26 | %tmp_user_catalog /tmp lcmuk trace |
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| 27 | %compiler_name ifort lcmuk trace |
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| 28 | %fopts -axW:-cpp:-g:-CB:-inline_debug_info:-r8:-nbs:-convert:little:endian lcmuk trace |
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| 29 | %lopts -axW:-cpp:-g:-CB:-inline_debug_info:-r8:-nbs:-Vaxlib lcmuk trace |
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| 30 | # |
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| 31 | %compiler_name mpxlf95_r ibmh parallel |
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| 32 | %fopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape ibmh parallel |
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| 33 | %lopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape:-lesslsmp ibmh parallel |
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| 34 | %memory 1630 ibmh parallel |
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| 35 | %cpumax 1000 ibmh parallel |
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| 36 | %numprocs 4 ibmh parallel |
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| 37 | %remote_username niksiraa ibmh parallel |
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| 38 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmh parallel |
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| 39 | %tmp_user_catalog /fastfs/work/niksiraa ibmh parallel |
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| 40 | %email_notification raasch@muk.uni-hannover.de ibmh parallel |
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| 41 | # |
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| 42 | %compiler_name mpxlf95_r ibmh parallel debug |
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| 43 | %fopts -qnoopt:-g:-qsmp=noopt:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap ibmh parallel debug |
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| 44 | %lopts -qnoopt:-g:-qsmp=noopt:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap:-lesslsmp ibmh parallel debug |
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| 45 | %memory 1000 ibmh parallel debug |
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| 46 | %cpumax 1000 ibmh parallel debug |
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| 47 | %numprocs 4 ibmh parallel debug |
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| 48 | %remote_username niksiraa ibmh parallel debug |
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| 49 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmh parallel debug |
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| 50 | # |
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| 51 | %compiler_name mpxlf95_r ibmh parallel trace |
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| 52 | %fopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap ibmh parallel trace |
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| 53 | %lopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap:-lesslsmp ibmh parallel trace |
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| 54 | %memory 1000 ibmh parallel trace |
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| 55 | %cpumax 1000 ibmh parallel trace |
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| 56 | %numprocs 4 ibmh parallel trace |
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| 57 | %remote_username niksiraa ibmh parallel trace |
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| 58 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmh parallel trace |
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| 59 | # |
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| 60 | %compiler_name mpxlf95_r ibmh parallel hpmcount |
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| 61 | %fopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qsmp=omp:-qarch=pwr4:-qnosave:-qnoescape ibmh parallel hpmcount |
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| 62 | %lopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qsmp=omp:-qarch=pwr4:-qnosave:-qnoescape:-lesslsmp ibmh parallel hpmcount |
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| 63 | %memory 1000 ibmh parallel hpmcount |
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| 64 | %cpumax 1000 ibmh parallel hpmcount |
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| 65 | %numprocs 4 ibmh parallel hpmcount |
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| 66 | %remote_username niksiraa ibmh parallel hpmcount |
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| 67 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmh parallel hpmcount |
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| 68 | %email_notification raasch@muk.uni-hannover.de ibmh parallel hpmcount |
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| 69 | # |
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| 70 | %compiler_name mpxlf95_r ibmb parallel |
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| 71 | %fopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape ibmb parallel |
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| 72 | %lopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape:-lesslsmp ibmb parallel |
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| 73 | %memory 1630 ibmb parallel |
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| 74 | %cpumax 1000 ibmb parallel |
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| 75 | %numprocs 4 ibmb parallel |
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| 76 | %remote_username niksiraa ibmb parallel |
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| 77 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmb parallel |
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| 78 | # |
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| 79 | %compiler_name mpxlf95_r ibmb parallel deb |
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| 80 | %fopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap ibmb parallel deb |
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| 81 | %lopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap:-lesslsmp ibmb parallel deb |
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| 82 | %memory 1000 ibmb parallel deb |
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| 83 | %cpumax 1000 ibmb parallel deb |
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| 84 | %numprocs 4 ibmb parallel deb |
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| 85 | %remote_username niksiraa ibmb parallel deb |
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| 86 | %tmp_data_catalog /fastfs/work/niksiraa/palm_restart_data ibmb parallel deb |
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| 87 | # |
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| 88 | %compiler_name sxmpif90 nech parallel |
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| 89 | %fopts -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4:-pvctl:fullmsg\':-ftrace:-P:stack:-pi:auto:-pi:line=1000 nech parallel |
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| 90 | %lopts -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4\':-ftrace:-P:stack:-pi:auto:-pi:line=1000:-L/SX/opt/MathKeisan/MK1_6/lib/:-l:fft nech parallel |
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| 91 | %memory 4000 nech parallel |
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| 92 | %cpumax 1000 nech parallel |
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| 93 | %numprocs 4 nech parallel |
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| 94 | %tmp_data_catalog $WRKSHR/palm_restart_data nech parallel |
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| 95 | %remote_username b323011 nech parallel |
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| 96 | %email_notification raasch@muk.uni-hannover.de nech parallel |
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| 97 | # |
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[17] | 98 | %compiler_name sxmpif90 neck parallel |
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| 99 | %fopts -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4:-pvctl:fullmsg\':-ftrace:-P:stack:-pi:auto:-pi:line=1000 neck parallel |
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| 100 | %lopts -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4\':-ftrace:-P:stack:-pi:auto:-pi:line=1000:-L/SX/opt/MathKeisan/MK1_6/lib/:-l:fft neck parallel |
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| 101 | %memory 4000 neck parallel |
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| 102 | %cpumax 1000 neck parallel |
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| 103 | %numprocs 4 neck parallel |
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| 104 | #%tmp_user_catalog <replace by your temporary directory> neck parallel |
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| 105 | #%tmp_data_catalog <replace by your temp. dir.> /palm_restart_data neck parallel |
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| 106 | #%remote_username <replace by your NEC-username> neck parallel |
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| 107 | #%email_notification tatuyama@gelgoog neck parallel |
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| 108 | # |
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[1] | 109 | %remote_username raasch decalpha parallel |
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| 110 | %tmp_user_catalog /usr2/users/raasch/work decalpha parallel |
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| 111 | %tmp_data_catalog /usr2/users/raasch/work/palm_restart_data decalpha parallel |
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| 112 | %compiler_name f95 decalpha parallel |
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| 113 | %fopts -fast:-r8 decalpha parallel |
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| 114 | %lopts -fast:-r8:-lfmpi:-lmpi decalpha parallel |
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| 115 | %memory 100 decalpha parallel |
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| 116 | %cpumax 100 decalpha parallel |
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| 117 | # |
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| 118 | %source_path /edun/z051nyg/palm/current_version/SOURCE ibms parallel |
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| 119 | %compiler_name mpxlf95_r ibms parallel |
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| 120 | %fopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qsmp=omp:-qarch=pwr4:-qnosave:-qnoescape ibms parallel |
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| 121 | %lopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qsmp=omp:-qarch=pwr4:-qnosave:-qnoescape:-lesslsmp ibms parallel |
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| 122 | %memory 1000 ibms parallel |
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| 123 | %cpumax 1000 ibms parallel |
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| 124 | %numprocs 4 ibms parallel |
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| 125 | %remote_username z051nyg ibms parallel |
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| 126 | %tmp_data_catalog /edun/z051nyg/work ibms parallel |
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| 127 | %tmp_user_catalog /edun/z051nyg/work ibms parallel |
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| 128 | #%tmp_data_catalog /xtmp1 ibms parallel |
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| 129 | #%tmp_user_catalog /xtmp1 ibms parallel |
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| 130 | %email_notification raasch@muk.uni-hannover.de ibms parallel |
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| 131 | # |
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| 132 | %source_path $base_directory/SOURCE ibmy parallel |
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| 133 | %compiler_name mpxlf95_r ibmy parallel |
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| 134 | %fopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape ibmy parallel |
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| 135 | %lopts -O3:-g:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr4:-qarch=pwr4:-qnosave:-qnoescape ibmy parallel |
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| 136 | %memory 1000 ibmy parallel |
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| 137 | %cpumax 1000 ibmy parallel |
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| 138 | %numprocs 4 ibmy parallel |
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| 139 | %remote_username raasch ibmy parallel |
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| 140 | %tmp_data_catalog /usr1/users/raasch/work ibmy parallel |
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| 141 | %tmp_user_catalog /usr1/users/raasch/work ibmy parallel |
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| 142 | %email_notification raasch@muk.uni-hannover.de ibmy parallel |
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| 143 | # |
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| 144 | %compiler_name mpxlf95_r ibmy parallel trace |
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| 145 | %fopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap ibmy parallel trace |
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| 146 | %lopts -qnoopt:-g:-C:-qinitauto=FFFFFFFF:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qnosave:-qnoescape:-qflttrap=overflow::zerodivide::invalid::enable:-qsigtrap ibmy parallel trace |
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| 147 | %memory 1000 ibmy parallel trace |
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| 148 | %cpumax 1000 ibmy parallel trace |
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| 149 | %numprocs 4 ibmy parallel trace |
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| 150 | %remote_username raasch ibmy parallel trace |
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| 151 | %tmp_data_catalog /usr1/users/raasch/work ibmy parallel trace |
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| 152 | %tmp_user_catalog /usr1/users/raasch/work ibmy parallel trace |
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| 153 | %email_notification raasch@muk.uni-hannover.de ibmy parallel trace |
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| 154 | # |
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| 155 | %write_binary true restart |
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| 156 | # |
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| 157 | #---------------------------------------------------------------------------- |
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| 158 | # INPUT-commands, executed before running PALM - lines must start with "IC:" |
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| 159 | #---------------------------------------------------------------------------- |
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| 160 | #IC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && assign -F cachea:512:1:1 f:BININ |
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| 161 | # |
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| 162 | #---------------------------------------------------------------------------- |
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| 163 | # ERROR-commands - executed when program terminates abnormally |
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| 164 | #---------------------------------------------------------------------------- |
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| 165 | EC:[[ \$locat = compile && ( \$( echo \$localhost | cut -c1-3 ) = t3e ) ]] && cat cflist.out |
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| 166 | EC:[[ \$locat = execution ]] && cat RUN_CONTROL |
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| 167 | EC:[[ \$locat = execution ]] && cat PARTICLE_INFOS/* |
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| 168 | EC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && ls -al |
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| 169 | EC:[[ \$( echo \$localhost | cut -c1-3 ) = ibm ]] && ls -al |
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| 170 | # |
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| 171 | #---------------------------------------------------------------------------- |
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| 172 | # OUTPUT-commands - executed when program terminates normally |
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| 173 | #---------------------------------------------------------------------------- |
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| 174 | # |
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| 175 | OC:[[ -f CPU_MEASURES/_0000 ]] && cat CPU_MEASURES/* >> CPU_MEASURE_ALL |
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| 176 | # Combine 1D- and 3D-profile output (these files are not usable for plotting) |
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| 177 | OC:[[ -f LIST_PROFIL_1D ]] && cat LIST_PROFIL_1D >> LIST_PROFILE |
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| 178 | OC:[[ -f LIST_PROFIL ]] && cat LIST_PROFIL >> LIST_PROFILE |
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| 179 | # |
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| 180 | # Combine all particle information files |
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| 181 | OC:[[ -f PARTICLE_INFOS/_0000 ]] && cat PARTICLE_INFOS/* >> PARTICLE_INFO |
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| 182 | # |
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| 183 | # Extend number of files to be opened simultaneously (sometimes necessary |
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| 184 | # for combine_plot_fields |
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| 185 | #OC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && limit -v -f 255 -p 0 |
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| 186 | # |
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| 187 | # Combine the 2D- and 3D-plot-data of the subdomains (one file per PE) to |
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| 188 | # one file respectively |
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| 189 | OC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && combine_plot_fields.x |
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| 190 | OC:[[ \$( echo \$localhost | cut -c1-3 ) = ibm ]] && combine_plot_fields.x |
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| 191 | OC:[[ \$( echo \$localhost | cut -c1-3 ) = nec ]] && combine_plot_fields.x |
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| 192 | OC:[[ \$( echo \$localhost | cut -c1-3 ) = dec ]] && combine_plot_fields.x |
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| 193 | # |
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| 194 | # Combine parameter files necessary for plot software (iso2d + AVS) |
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| 195 | OC:[[ -f PLOT2D_XY_GLOBAL ]] && cat PLOT2D_XY_LOCAL >> PLOT2D_XY_GLOBAL |
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| 196 | OC:[[ -f PLOT2D_XZ_GLOBAL ]] && cat PLOT2D_XZ_LOCAL >> PLOT2D_XZ_GLOBAL |
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| 197 | OC:[[ -f PLOT2D_YZ_GLOBAL ]] && cat PLOT2D_YZ_LOCAL >> PLOT2D_YZ_GLOBAL |
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| 198 | OC:[[ -f PLOT3D_FLD ]] && cat PLOT3D_FLD_COOR >> PLOT3D_FLD |
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| 199 | # |
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| 200 | # tar all 3D-plot-data files in case that compressed output is switched on |
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| 201 | OC:[[ -f PLOT3D_COMPRESSED ]] && tar cf PLOT3D_DATA PLOT3D_DATA_* |
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| 202 | # |
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| 203 | #---------------------------------------------------------------------------- |
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| 204 | # List of input-files |
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| 205 | #---------------------------------------------------------------------------- |
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[18] | 206 | PARIN in:job d3# $base_data/$fname/INPUT _p3d |
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| 207 | PARIN in:job d3f $base_data/$fname/INPUT _p3df |
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| 208 | TOPOGRAPHY_DATA in:locopt d3# $base_data/$fname/INPUT _topo |
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| 209 | BININ in:loc:flpe d3f $base_data/$fname/RESTART _d3d |
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| 210 | PARTICLE_RESTART_DATA_IN in:loc:flpe prtf $base_data/$fname/RESTART _rprt |
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| 211 | DATA_1D_PR_NETCDF in:locopt prf $base_data/$fname/OUTPUT _pr nc |
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| 212 | DATA_1D_SP_NETCDF in:locopt spf $base_data/$fname/OUTPUT _sp nc |
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| 213 | DATA_1D_TS_NETCDF in:locopt tsf $base_data/$fname/OUTPUT _ts nc |
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| 214 | DATA_1D_PTS_NETCDF in:locopt ptsf $base_data/$fname/OUTPUT _pts nc |
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| 215 | DATA_2D_XY_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy nc |
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| 216 | DATA_2D_XY_AV_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy_av nc |
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| 217 | DATA_2D_XZ_NETCDF in:locopt xzf $base_data/$fname/OUTPUT _xz nc |
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| 218 | DATA_2D_YZ_NETCDF in:locopt yzf $base_data/$fname/OUTPUT _yz nc |
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| 219 | DATA_3D_NETCDF in:locopt 3df $base_data/$fname/OUTPUT _3d nc |
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| 220 | DATA_PRT_NETCDF in:locopt:pe prtf $base_data/$fname/OUTPUT _prt |
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[1] | 221 | # |
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| 222 | #---------------------------------------------------------------------------- |
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| 223 | # List of output-files |
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| 224 | #---------------------------------------------------------------------------- |
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[18] | 225 | BINOUT out:loc:flpe restart $base_data/$fname/RESTART _d3d |
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| 226 | PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART _rprt |
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[1] | 227 | # |
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[18] | 228 | RUN_CONTROL out:loc:tr d3# $base_data/$fname/MONITORING _rc |
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| 229 | RUN_CONTROL out:loc:tra d3f $base_data/$fname/MONITORING _rc |
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| 230 | HEADER out:loc:tr d3# $base_data/$fname/MONITORING _header |
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| 231 | HEADER out:loc:tra d3f $base_data/$fname/MONITORING _header |
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| 232 | CPU_MEASURES out:loc:tr d3# $base_data/$fname/MONITORING _cpu |
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| 233 | CPU_MEASURES out:loc:tra d3f $base_data/$fname/MONITORING _cpu |
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| 234 | DVRP_LOG out:loc:tr dv# $base_data/$fname/MONITORING _dvrp_log |
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| 235 | DVRP_LOG out:loc:tra dvf $base_data/$fname/MONITORING _dvrp_log |
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| 236 | PARTICLE_INFO out:loc:tr pt# $base_data/$fname/MONITORING _prt_info |
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| 237 | PARTICLE_INFO out:loc:tra ptf $base_data/$fname/MONITORING _prt_info |
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[1] | 238 | # |
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[18] | 239 | DATA_1D_PR_NETCDF out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr nc |
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| 240 | #DATA_1D_PR_NETCDF out:loc pr#:prf $base_data/$fname/OUTPUT _pr nc |
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| 241 | DATA_1D_SP_NETCDF out:loc:tr sp#:spf $base_data/$fname/OUTPUT _sp nc |
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| 242 | DATA_1D_TS_NETCDF out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts nc |
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| 243 | DATA_1D_PTS_NETCDF out:loc:tr pts#:ptsf $base_data/$fname/OUTPUT _pts nc |
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| 244 | DATA_2D_XY_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy nc |
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| 245 | DATA_2D_XY_AV_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy_av nc |
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| 246 | DATA_2D_XZ_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz nc |
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| 247 | DATA_2D_XZ_AV_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz_av nc |
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| 248 | DATA_2D_YZ_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz nc |
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| 249 | DATA_2D_YZ_AV_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz_av nc |
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| 250 | DATA_3D_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d nc |
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| 251 | DATA_3D_AV_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d_av nc |
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| 252 | DATA_PRT_NETCDF out:loc:pe prt#:prtf $base_data/$fname/OUTPUT _prt nc |
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| 253 | DATA_PRT_NETCDF out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT _prt nc |
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[1] | 254 | # |
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[18] | 255 | PLOT3D_FLD out:loc:tr avs $base_data/$fname/OUTPUT _fld fld |
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| 256 | PLOT3D_COOR out:loc:tr avs $base_data/$fname/OUTPUT _avscor |
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| 257 | PLOT3D_DATA out:loc:tr avs $base_data/$fname/OUTPUT _avs |
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| 258 | PARTICLE_DATA out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT _prt_dat |
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| 259 | |
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