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source: palm/trunk/SCRIPTS/.mrun.config.default @ 1345

Last change on this file since 1345 was 1241, checked in by heinze, 11 years ago

Nudging and large scale forcing from external file implemented
  • Property svn:keywords set to Id
File size: 12.7 KB
RevLine 
[892]1#$Id: .mrun.config.default 1241 2013-10-30 11:36:58Z kanani $
[1]2#column 1          column 2                                   column 3
3#name of variable  value of variable (~ must not be used)     scope
4#----------------------------------------------------------------------------
5%mainprog          palm.f90
[40]6%base_directory    $HOME/palm/current_version
7%base_data         ~/palm/current_version/JOBS
8%source_path       $base_directory/trunk/SOURCE
[1]9%add_source_path   $base_directory/USER_CODE/$fname
10%depository_path   $base_directory/MAKE_DEPOSITORY
11%use_makefile      true
12#
[83]13# Enter your own host below by adding another line containing in the second
14# column your hostname (as provided by the unix command "hostname") and in the
[246]15# third column the host identifier. Depending on your operating system, the
16# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
[83]17# (IBM-AIX), or "nec" (NEC-SX), respectively.
18#
[246]19# The next line is just an example. Add your own line below or replace this line.
20%host_identifier   myhostname  lcmy
[1]21#
22#
[246]23# The next block contains all informations for compiling the PALM code
24# and for generating and running the PALM executable using MPI. Replace all
25# required paths (given in <>) by the respective paths valid on your host.
[1231]26# Also replace <hi> by your host identifier (see above <hi> example "lcmy")
27# in each line!
[246]28# Compilernames, cpp-options and compiler-options are assuming
29# an Intel-Compiler and mpich2 on this host! Please change
30# appropriately, if you are using a different compiler / MPI-Version.
[1]31#
[246]32%tmp_user_catalog  /tmp                                          <hi> parallel
33%compiler_name     mpif90                                        <hi> parallel
34%compiler_name_ser ifort                                         <hi> parallel
[1085]35%cpp_options       -cpp:-D__mpi2:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf   <hi> parallel
[246]36%netcdf_inc        -I:<replace by netcdf include path>           <hi> parallel
37%netcdf_lib        -L<replace by netcdf library path>:-lnetcdf   <hi> parallel
[503]38%mopts             -j:4                                          <hi> parallel
[1085]39%fopts             -xS:-r8:-nbs:-convert:little_endian:-I:<replace by mpi include path>   <hi> parallel
40%lopts             -xS:-r8:-nbs:-Vaxlib:-L:<replace by mpi library path>                  <hi> parallel
[246]41# if you want to use your own hostfile, uncomment next line
42#%hostfile          $base_directory/.hostfile                    <hi> parallel
43# if you want this host to be used as a remote host, uncomment next line
44#%remote_username   <replace by your username on this host>      <hi> parallel
[892]45# if you want to load modules on the remote host, use the following line
46#%modules           <replace by the modules to be loaded>        <hi> parallel
47# if you want to perform initial commands on ssh connections, use the following line
48#%login_init_cmd    <replace by the inital commands>             <hi> parallel
[181]49#
[1231]50#
51%tmp_user_catalog  /tmp                                          <hi> parallel trace
52%compiler_name     mpif90                                        <hi> parallel trace
53%compiler_name_ser ifort                                         <hi> parallel trace
54%cpp_options       -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf   <hi> parallel trace
55%netcdf_inc        -I:<replace by netcdf include path>           <hi> parallel trace
56%netcdf_lib        -L<replace by netcdf library path>:-lnetcdf   <hi> parallel trace
57%mopts             -j:4                                          <hi> parallel trace
58%fopts             -C:-check:nooutput_conversion:-fpe0:-debug:-traceback:-g:-w:-xT:-O0:-cpp:-r8:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian  <hi> parallel trace
59%lopts             -C:-check:nooutput_conversion:-fpe0:-debug:-traceback:-g:-w:-xT:-O0:-cpp:-r8:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib  <hi> parallel trace
60# if you want to use your own hostfile, uncomment next line
61#%hostfile          $base_directory/.hostfile                    <hi> parallel trace
62# if you want this host to be used as a remote host, uncomment next line
63#%remote_username   <replace by your username on this host>      <hi> parallel trace
64# if you want to load modules on the remote host, use the following line
65#%modules           <replace by the modules to be loaded>        <hi> parallel trace
66# if you want to perform initial commands on ssh connections, use the following line
67#%login_init_cmd    <replace by the inital commands>             <hi> parallel trace
68#
69#
[1]70%write_binary                true                             restart
71#
72#----------------------------------------------------------------------------
73# INPUT-commands, executed before running PALM - lines must start with "IC:"
74#----------------------------------------------------------------------------
[246]75#IC:
[1]76#
77#----------------------------------------------------------------------------
78# ERROR-commands - executed when program terminates abnormally
79#----------------------------------------------------------------------------
80EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
[246]81EC:pwd; ls -al
[1]82#
83#----------------------------------------------------------------------------
84# OUTPUT-commands - executed when program terminates normally
85#----------------------------------------------------------------------------
86#
87# Combine 1D- and 3D-profile output (these files are not usable for plotting)
88OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
89OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
90#
91# Combine all particle information files
92OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
93#
94#----------------------------------------------------------------------------
95# List of input-files
96#----------------------------------------------------------------------------
[255]97PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
98PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
99TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
[1241]100NUDGING_DATA             in:locopt     d3#:d3f  $base_data/$fname/INPUT    _nudge
101LSF_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _lsf
[255]102BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
103PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
104DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
105DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
106DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
107DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
108DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
109DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
110DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
111DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
112DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
113DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
[1]114#
115#----------------------------------------------------------------------------
116# List of output-files
117#----------------------------------------------------------------------------
[18]118BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
119PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
[1]120#
[18]121RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
122RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
123HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
124HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
125CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
126CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
[1]127#
[18]128DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
129DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
130DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
131DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
132DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
133DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
134DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
135DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
136DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
137DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
138DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
139DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
[410]140DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
141DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
142DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
143DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
144DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
145DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
146DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
147DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
148DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
149DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
150DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
151DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
152DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
153DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
154DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
155DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
156DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
157DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
158DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
159DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
160DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
161DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
162DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
163DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
164DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
165DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
166DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
167DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
168DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
169DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
170DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
171DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
172DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
173DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
174DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
175DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
176DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
177DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
178DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
179DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
[18]180DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
[272]181DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
[1]182#
[246]183DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
184DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
185PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
186PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
187PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
[892]188# A BLANK LINE MUST FOLLOW
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