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source: palm/trunk/SCRIPTS/.mrun.config.cuhk @ 1515

Last change on this file since 1515 was 1446, checked in by maronga, 10 years ago

removed blanks from <> strings in .mrun.config files / adapted hlrn_watchdog for HLRN-III
File size: 12.7 KB
RevLine 
[1235]1#$Id: .mrun.config.default 1231 2013-09-20 11:25:45Z kanani $
2#column 1          column 2                                   column 3
3#name of variable  value of variable (~ must not be used)     scope
4#----------------------------------------------------------------------------
5%mainprog          palm.f90
6%base_directory    $HOME/palm/current_version
7%base_data         ~/palm/current_version/JOBS
8%source_path       $base_directory/trunk/SOURCE
9%add_source_path   $base_directory/USER_CODE/$fname
10%depository_path   $base_directory/MAKE_DEPOSITORY
11%use_makefile      true
12#
13# Enter your own host below by adding another line containing in the second
14# column your hostname (as provided by the unix command "hostname") and in the
15# third column the host identifier. Depending on your operating system, the
16# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
17# (IBM-AIX), or "nec" (NEC-SX), respectively.
18#
19# The next line is just an example. Add your own line below or replace this line.
[1446]20%host_identifier   <replace_with_your_hostname>  lccuhk
[1235]21#
22#
23# The next block contains all informations for compiling the PALM code
24# and for generating and running the PALM executable using MPI. Replace all
25# required paths (given in <>) by the respective paths valid on your host.
26# Also replace <hi> by your host identifier (see above <hi> example "lcmy")
27# in each line!
28# Compilernames, cpp-options and compiler-options are assuming
29# an Intel-Compiler and mpich2 on this host! Please change
30# appropriately, if you are using a different compiler / MPI-Version.
31#
32%tmp_user_catalog  /home/student/tmp                             lccuhk parallel
33%compiler_name     mpif90                                        lccuhk parallel
34%compiler_name_ser ifort                                         lccuhk parallel
35%cpp_options       -cpp:-D__mpi2:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf   lccuhk parallel
36%netcdf_inc        -I:/opt/netcdf-3.6.3/include                  lccuhk parallel
37%netcdf_lib        -L/opt/netcdf-3.6.3/lib:-lnetcdf              lccuhk parallel
38%mopts             -j:4                                          lccuhk parallel
39%fopts             -xS:-r8:-nbs:-convert:little_endian:-I:/opt/mpich2/include  lccuhk parallel
40%lopts             -xS:-r8:-nbs:-Vaxlib:-L:/opt/mpich2/lib                     lccuhk parallel
41%remote_username    student                                      lccuhk parallel
42# if you want to use your own hostfile, uncomment next line
43#%hostfile          $base_directory/.hostfile                    lccuhk parallel
44# if you want to load modules on the remote host, use the following line
[1446]45#%modules           <replace_by_the_modules_to_be_loaded>        lccuhk parallel
[1235]46# if you want to perform initial commands on ssh connections, use the following line
[1446]47#%login_init_cmd    <replace_by_the_inital_commands>             lccuhk parallel
48#%login_init_cmd    <replace_by_the_inital_commands>             lccuhk parallel
[1235]49#
50#
51%tmp_user_catalog  /home/student/tmp                             lccuhk parallel trace
52%compiler_name     mpif90                                        lccuhk parallel trace
53%compiler_name_ser ifort                                         lccuhk parallel trace
54%cpp_options       -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf   lccuhk parallel trace
55%netcdf_inc        -I:/opt/netcdf-3.6.3/include                  lccuhk parallel trace
56%netcdf_lib        -L/opt/netcdf-3.6.3/lib:-lnetcdf              lccuhk parallel trace
57%mopts             -j:4                                          lccuhk parallel trace
58%fopts             -C:-check:nooutput_conversion:-fpe0:-debug:-traceback:-g:-w:-xT:-O0:-cpp:-r8:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian  lccuhk parallel trace
59%lopts             -C:-check:nooutput_conversion:-fpe0:-debug:-traceback:-g:-w:-xT:-O0:-cpp:-r8:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib  lccuhk parallel trace
60%remote_username    student                                      lccuhk parallel trace
61# if you want to use your own hostfile, uncomment next line
62#%hostfile          $base_directory/.hostfile                    lccuhk parallel trace
63# if you want to load modules on the remote host, use the following line
[1446]64#%modules           <replace_by_the_modules_to_be_loaded>        lccuhk parallel trace
[1235]65# if you want to perform initial commands on ssh connections, use the following line
[1446]66#%login_init_cmd    <replace_by_the_inital_commands>             lccuhk parallel trace
[1235]67#
68#
69%write_binary                true                             restart
70#
71#----------------------------------------------------------------------------
72# INPUT-commands, executed before running PALM - lines must start with "IC:"
73#----------------------------------------------------------------------------
74#IC:
75#
76#----------------------------------------------------------------------------
77# ERROR-commands - executed when program terminates abnormally
78#----------------------------------------------------------------------------
79EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
80EC:pwd; ls -al
81#
82#----------------------------------------------------------------------------
83# OUTPUT-commands - executed when program terminates normally
84#----------------------------------------------------------------------------
85#
86# Combine 1D- and 3D-profile output (these files are not usable for plotting)
87OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
88OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
89#
90# Combine all particle information files
91OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
92#
93#----------------------------------------------------------------------------
94# List of input-files
95#----------------------------------------------------------------------------
96PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
97PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
98TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
[1241]99NUDGING_DATA             in:locopt     d3#:d3f  $base_data/$fname/INPUT    _nudge
100LSF_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _lsf
[1235]101BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
102PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
103DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
104DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
105DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
106DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
107DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
108DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
109DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
110DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
111DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
112DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
113#
114#----------------------------------------------------------------------------
115# List of output-files
116#----------------------------------------------------------------------------
117BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
118PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
119#
120RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
121RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
122HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
123HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
124CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
125CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
126#
127DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
128DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
129DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
130DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
131DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
132DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
133DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
134DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
135DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
136DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
137DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
138DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
139DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
140DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
141DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
142DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
143DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
144DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
145DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
146DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
147DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
148DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
149DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
150DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
151DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
152DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
153DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
154DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
155DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
156DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
157DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
158DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
159DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
160DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
161DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
162DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
163DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
164DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
165DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
166DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
167DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
168DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
169DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
170DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
171DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
172DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
173DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
174DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
175DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
176DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
177DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
178DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
179DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
180DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
181#
182DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
183DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
184PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
185PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
186PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
187# A BLANK LINE MUST FOLLOW
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