1 | #!/usr/bin/env bash |
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2 | #------------------------------------------------------------------------------# |
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3 | # This file is part of PALM. |
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4 | # |
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5 | # PALM is free software: you can redistribute it and/or modify it under the |
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6 | # terms of the GNU General Public License as published by the Free Software |
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7 | # Foundation, either version 3 of the License, or (at your option) any later |
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8 | # version. |
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9 | # |
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10 | # PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
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11 | # WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
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12 | # A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
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13 | # |
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14 | # You should have received a copy of the GNU General Public License along with |
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15 | # PALM. If not, see <http://www.gnu.org/licenses/>. |
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16 | # |
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17 | # Copyright 1997-2018 Leibniz Universitaet Hannover |
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18 | #------------------------------------------------------------------------------# |
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19 | # Temporary trunk side of the automatic installation scipt |
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20 | # WARNING: This script does not work as a standalone installer! |
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21 | #------------------------------------------------------------------------------# |
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22 | |
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23 | |
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24 | # install PALM |
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25 | palm_installer_build() { |
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26 | printf "%s\n" "${program_name} installer is configuring using cmake..." |
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27 | if [[ "$palm_installer_build_rrtmg" == "true" ]]; then |
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28 | if [[ "$RRTMG_ROOT" == "" ]]; then |
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29 | RRTMG_ROOT=${install_prefix}/rrtmg |
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30 | fi |
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31 | fi |
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32 | palm_installer_create_files |
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33 | rm -rf ${build_dir} |
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34 | mkdir -p ${build_dir} |
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35 | cd ${build_dir} |
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36 | cp ${trunk_dir}/SCRIPTS/.palm.config.default.in ${source_dir}/.palm.config.default.in |
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37 | cmake -Wno-dev ${CUSTOM_FORTRAN_COMPILER:+-DCMAKE_Fortran_COMPILER=}${CUSTOM_FORTRAN_COMPILER} \ |
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38 | ${NETCDF_C_ROOT:+-DNETCDF_C_ROOT=}${NETCDF_C_ROOT} \ |
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39 | ${NETCDF_FORTRAN_ROOT:+-DNETCDF_FORTRAN_ROOT=}${NETCDF_FORTRAN_ROOT} \ |
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40 | ${RRTMG_ROOT:+-DRRTMG_ROOT=}${RRTMG_ROOT} \ |
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41 | -DPALM_CORES=$NUM_PROC_BUILD \ |
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42 | -DCMAKE_BUILD_TYPE=Release \ |
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43 | ${install_prefix:+-DCMAKE_INSTALL_PREFIX=}${install_prefix} \ |
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44 | -DCMAKE_USERNAME=${USER} \ |
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45 | ${source_dir} |
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46 | if [[ $? -ne 0 ]]; then |
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47 | hrule |
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48 | printf "| \e[1;31m%-${number_of_cols}s\e[0m |\n" "Configuration failed!" |
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49 | palm_installer_ticket_message |
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50 | hrule |
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51 | exit 1 |
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52 | else |
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53 | hrule |
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54 | printf "| \e[1;32m%-${number_of_cols}s\e[0m |\n" "Configuration finished!" |
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55 | hrule |
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56 | fi |
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57 | palm_read_yn "Please check the configuration!!! Would you like to continue?" "RESPONSE_CONFIGURE" |
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58 | if [[ "$RESPONSE_CONFIGURE" != "y" ]]; then |
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59 | palm_installer_abort_message |
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60 | fi |
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61 | if [[ "$palm_installer_build_rrtmg" == "true" ]]; then |
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62 | palm_installer_build_rrtmg |
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63 | fi |
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64 | cd ${install_prefix} |
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65 | rm -rf ${source_dir} |
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66 | rm -rf MAKE_DEPOSITORY_parallel |
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67 | bash ${trunk_dir}/SCRIPTS/palmbuild -v -c "default" |
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68 | } |
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69 | |
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70 | palm_installer_build_rrtmg() { |
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71 | printf "%s\n" "${program_name} installer is building the RRTMG library..." |
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72 | local version="1.0" |
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73 | local prog="librrtmg" |
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74 | build_dir_rrtmg=${source_dir}/rrtmg |
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75 | mkdir -p ${build_dir_rrtmg} |
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76 | cp ${trunk_dir}/LIB/rrtmg/*.f90 ${build_dir_rrtmg}/ |
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77 | cp ${trunk_dir}/LIB/rrtmg/Makefile ${build_dir_rrtmg}/ |
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78 | cd ${build_dir_rrtmg} |
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79 | bash ${build_dir_rrtmg}/build_rrtmg |
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80 | mkdir -p ${build_dir_rrtmg}/lib |
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81 | mkdir -p ${build_dir_rrtmg}/include |
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82 | cp ${build_dir_rrtmg}/$prog.so ${build_dir_rrtmg}/lib/$prog.so.$version |
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83 | cp ${build_dir_rrtmg}/*.mod ${build_dir_rrtmg}/include/ |
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84 | mkdir -p ${RRTMG_ROOT}/lib |
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85 | mkdir -p ${RRTMG_ROOT}/include |
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86 | cp ${build_dir_rrtmg}/lib/$prog.so.$version ${RRTMG_ROOT}/lib/ |
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87 | cp ${build_dir_rrtmg}/include/*.mod ${RRTMG_ROOT}/include/ |
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88 | if [ -f ${RRTMG_ROOT}/lib/$prog.so.1 ] |
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89 | then |
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90 | rm ${RRTMG_ROOT}/lib/$prog.so.1 |
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91 | fi |
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92 | ln -s ${RRTMG_ROOT}/lib/$prog.so.$version ${RRTMG_ROOT}/lib/$prog.so.1 |
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93 | if [ -f ${RRTMG_ROOT}/lib/$prog.so ] |
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94 | then |
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95 | rm ${RRTMG_ROOT}/lib/$prog.so |
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96 | fi |
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97 | ln -s ${RRTMG_ROOT}/lib/$prog.so.1 ${RRTMG_ROOT}/lib/$prog.so |
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98 | } |
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99 | |
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100 | palm_installer_set_path() { |
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101 | [[ -w ${HOME}/.mybashrc ]] && shell_profile=${HOME}/.mybashrc |
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102 | if [[ ! -w ${shell_profile} ]]; then |
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103 | printf "\e[1;31mWARNING\e[0m: ${program_name} binary \e[1;31mpath could not be written\e[0m to \"${shell_profile}\"\n" |
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104 | printf "In order to run the ${program_name} execution script \"mrun\" you need to set the following paths\n" |
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105 | printf " export PALM_BIN=${trunk_dir}/SCRIPTS\n" |
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106 | printf " export PATH=\$PALM_BIN:\$PATH\n" |
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107 | elif grep -q "^export PALM_BIN=${trunk_dir}/SCRIPTS" ${shell_profile}; then |
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108 | printf "${program_name} binary \e[1;32mpath already set correctly\e[0m in \"${shell_profile}\"\n" |
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109 | else |
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110 | if grep -q "PALM_BIN" ${shell_profile}; then |
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111 | sed -i "s@^[^#]\(.*PALM_BIN.*\)@#e\1@" ${shell_profile} |
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112 | printf "${program_name} binary \e[1;32mpath updated\e[0m in \"${shell_profile}\"" |
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113 | else |
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114 | printf "${program_name} binary \e[1;32mpath written\e[0m to \"${shell_profile}\"" |
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115 | fi |
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116 | cat >> ${shell_profile} << EOF |
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117 | #------------------------------------------------------------------------------- |
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118 | ##PALM## |
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119 | export PALM_BIN=${trunk_dir}/SCRIPTS |
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120 | export PATH=\$PALM_BIN:\$PATH |
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121 | |
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122 | EOF |
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123 | fi |
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124 | export PALM_BIN=${trunk_dir}/SCRIPTS |
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125 | export PATH=$PALM_BIN:$PATH |
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126 | echo " " |
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127 | } |
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128 | |
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129 | palm_installer_test() { |
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130 | hrule |
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131 | printf "Testing ${program_name} with \"${1}\"... " |
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132 | source ${shell_profile} |
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133 | local input_dir=${install_prefix}/JOBS/${1}/INPUT/ |
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134 | local monitoring_dir=${install_prefix}/JOBS/${1}/MONITORING/ |
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135 | local test_dir=${trunk_dir}/TESTS/cases |
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136 | rm -rf ${monitoring_dir} |
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137 | mkdir -p ${input_dir} |
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138 | cp ${test_dir}/${1}/INPUT/${1}_p3d ${input_dir} |
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139 | bash ${trunk_dir}/SCRIPTS/palmrun -r ${1} -a "d3#" -c "default" -X "$NUM_PROC_TEST" -T "$NUM_PROC_TEST" -v -B > ${install_prefix}/${logfile_test} 2>&1 |
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140 | grep -A 99999 "Run-control output" JOBS/${1}/MONITORING/${1}_rc 1> ${install_prefix}/RC_LOCAL 2> /dev/null |
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141 | grep -A 99999 "Run-control output" ${test_dir}/${1}/MONITORING/${1}_rc 1> ${install_prefix}/RC_DEFAULT 2> /dev/null |
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142 | diff_output=$(diff ${install_prefix}/RC_DEFAULT ${install_prefix}/RC_LOCAL) |
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143 | rm ${install_prefix}/RC_LOCAL ${install_prefix}/RC_DEFAULT |
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144 | if [[ "${diff_output}" == "" ]]; then |
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145 | printf "\e[1;32m passed\e[0m\n" |
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146 | return 0 |
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147 | else |
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148 | printf "\e[1;31m failed\e[0m\n" |
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149 | test_status="failed" |
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150 | return 1 |
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151 | fi |
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152 | } |
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153 | |
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154 | palm_installer_test_suite() { |
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155 | rm -f ${install_prefix}/${logfile_test} |
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156 | palm_installer_test "example_cbl" # ToDo: replace with palmtest python script |
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157 | hrule |
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158 | cat ${install_prefix}/${logfile_test} >> ${logfile_all} |
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159 | if [[ "${test_status}" == "failed" ]]; then |
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160 | printf "| \e[1;31m%-${number_of_cols}s\e[0m \n" "Some tests failed. ${program_name} installation not successful :-(" |
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161 | printf "| \e[1;31m%-${number_of_cols}s\e[0m \n" "More detailed information regarding the failure can be found in file:" |
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162 | printf "| \e[1;31m%-${number_of_cols}s\e[0m \n" " ${install_prefix}/${logfile_test}" |
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163 | palm_installer_ticket_message |
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164 | hrule |
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165 | exit 1 |
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166 | else |
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167 | printf "| \e[1;32m%-${number_of_cols}s\e[0m |\n" "All found tests passed. ${program_name} installation successful :-)" |
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168 | rm -f ${install_prefix}/${logfile_test} |
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169 | rm -rf ${install_prefix}/tmp/* |
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170 | hrule |
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171 | fi |
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172 | } |
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173 | |
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174 | palm_post_installer_help() { |
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175 | hrule |
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176 | printf "| %-${number_of_cols}s \n" " " |
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177 | printf "| %-${number_of_cols}s \n" "-- To use ${program_name} it is required to update your PATH variable. Please type:" |
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178 | printf "| %-${number_of_cols}s \n" " " |
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179 | printf "| %-${number_of_cols}s \n" " source ${shell_profile}" |
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180 | printf "| %-${number_of_cols}s \n" " " |
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181 | printf "| %-${number_of_cols}s \n" " or restart your shell." |
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182 | printf "| %-${number_of_cols}s \n" " " |
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183 | printf "| %-${number_of_cols}s \n" "-- To work with ${program_name} please go to your ${program_name} base directory:" |
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184 | printf "| %-${number_of_cols}s \n" " " |
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185 | printf "| %-${number_of_cols}s \n" " cd ${install_prefix}" |
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186 | printf "| %-${number_of_cols}s \n" " " |
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187 | printf "| %-${number_of_cols}s \n" "-- To start the model, please use \"palmrun\" with appropriate options. For example:" |
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188 | printf "| %-${number_of_cols}s \n" " " |
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189 | printf "| %-${number_of_cols}s \n" " palmrun -r example_cbl -a \"d3#\" -c \"default\" -X \"$NUM_PROC_TEST\" -T \"$NUM_PROC_TEST\" " |
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190 | printf "| %-${number_of_cols}s \n" " | | | | | " |
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191 | printf "| %-${number_of_cols}s \n" " Job name | configuration | tasks per node " |
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192 | printf "| %-${number_of_cols}s \n" " I/O control list number of cores " |
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193 | printf "| %-${number_of_cols}s \n" " " |
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194 | printf "| %-${number_of_cols}s \n" "-- Edit \".palm.config.default\" to customize this ${program_name} installation." |
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195 | printf "| %-${number_of_cols}s \n" "-- To rebuild ${program_name} type: palmbuild -c \"default\"" |
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196 | printf "| %-${number_of_cols}s \n" " " |
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197 | printf "| %-${number_of_cols}s \n" "-- For further questions go to: https://palm.muk.uni-hannover.de/." |
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198 | printf "| %-${number_of_cols}s \n" " " |
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199 | } |
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200 | |
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201 | palm_installer_create_files() { |
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202 | mkdir -p ${source_dir} |
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203 | |
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204 | cat > ${source_dir}/CMakeLists.txt << EOF |
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205 | # This is the CMake configuration file for PALM |
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206 | |
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207 | cmake_minimum_required (VERSION 2.8) |
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208 | |
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209 | # set program name |
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210 | set(PALM_PROGRAM_NAME "PALM") |
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211 | |
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212 | project(\${PALM_PROGRAM_NAME} NONE) |
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213 | exec_program( hostname OUTPUT_VARIABLE PALM_HOSTNAME) |
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214 | |
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215 | # .palm.config locations |
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216 | set(config_in \${CMAKE_CURRENT_SOURCE_DIR}/.palm.config.default.in) |
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217 | set(config \${CMAKE_INSTALL_PREFIX}/.palm.config.default) |
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218 | |
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219 | # palmtest.yml locations |
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220 | set(palmtest_in \${CMAKE_CURRENT_SOURCE_DIR}/.palmtest.yml.in) |
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221 | set(palmtest \${CMAKE_INSTALL_PREFIX}/palmtest.yml) |
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222 | |
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223 | # build_rrtmg locations |
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224 | set(build_rrtmg_in \${CMAKE_CURRENT_SOURCE_DIR}/build_rrtmg.in) |
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225 | set(build_rrtmg \${CMAKE_CURRENT_SOURCE_DIR}/rrtmg/build_rrtmg) |
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226 | |
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227 | # include local cmake files |
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228 | set(PALM_CMAKE_FILES \${CMAKE_CURRENT_SOURCE_DIR}) |
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229 | list(APPEND CMAKE_MODULE_PATH \${PALM_CMAKE_FILES}) |
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230 | |
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231 | # enabling Fortran language support |
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232 | enable_language(Fortran) # required to compile the main model and all utilities |
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233 | |
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234 | # check for Fortran MPI support |
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235 | find_package(MPI REQUIRED) |
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236 | |
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237 | # check for netCDF |
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238 | #set(NETCDF_C "YES") |
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239 | set(NETCDF_FORTRAN "YES") |
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240 | find_package (NetCDF REQUIRED) |
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241 | find_program(NETCDF_FORTRAN_COMPILER_FULL NAMES \${NETCDF_FORTRAN_COMPILER}) |
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242 | if(NOT \${CMAKE_Fortran_COMPILER} STREQUAL \${NETCDF_FORTRAN_COMPILER_FULL} ) |
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243 | message(WARNING "Fortran compiler \"\${CMAKE_Fortran_COMPILER}\" does not match netCDF Fortran compiler \"\${NETCDF_FORTRAN_COMPILER_FULL}\".") |
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244 | else() |
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245 | message(STATUS "Fortran compiler matches netCDF Fortran compiler.") |
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246 | endif() |
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247 | |
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248 | # extract subversion info |
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249 | if (${SVN_CMAKE_CHECK}) |
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250 | find_package(Subversion) |
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251 | if(SUBVERSION_FOUND) |
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252 | Subversion_WC_INFO(\${PROJECT_SOURCE_DIR}/../trunk PALM) |
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253 | message(STATUS "Your \${PALM_PROGRAM_NAME} installation will be based on revision \${PALM_WC_REVISION}.") |
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254 | else(SUBVERSION_FOUND) |
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255 | message(WARNING "Subversion not found. Wondering how you aquired the PALM code. :-)") |
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256 | endif(SUBVERSION_FOUND) |
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257 | endif() |
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258 | |
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259 | # check for fftw |
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260 | #find_package(FFTW) |
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261 | #if(FFTW_FOUND) |
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262 | # message(STATUS "\${PALM_PROGRAM_NAME} is using an external fftw library.") |
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263 | #else(FFTW_FOUND) |
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264 | message(STATUS "\${PALM_PROGRAM_NAME} is using the buildin fft algorithm.") |
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265 | #endif(FFTW_FOUND) |
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266 | |
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267 | # compiler flag management |
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268 | if(\${CMAKE_Fortran_COMPILER_ID} STREQUAL "Cray") |
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269 | set(PALM_COMPILER_OPTIONS "-em -K trap=fp -O3 -hnoomp -hnoacc -hfp3 -hdynamic") |
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270 | set(PALM_LINKER_OPTIONS "\${PALM_COMPILER_OPTIONS} -dynamic") |
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271 | set(PALM_CPP_FLAGS "-eZ") |
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272 | elseif(\${CMAKE_Fortran_COMPILER_ID} STREQUAL "Intel") |
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273 | set(PALM_COMPILER_OPTIONS "-O3 -fp-model source -fno-alias -fpe0 -ftz -no-prec-div -no-prec-sqrt -ip -nbs -diag-disable 8290,8291") |
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274 | set(PALM_LINKER_OPTIONS "\${PALM_COMPILER_OPTIONS}") |
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275 | set(PALM_CPP_FLAGS "-cpp") |
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276 | list(APPEND PALM_CPP_OPTIONS __intel_compiler) |
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277 | elseif(\${CMAKE_Fortran_COMPILER_ID} STREQUAL "GNU") |
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278 | set(PALM_COMPILER_OPTIONS "-Ofast -ffree-line-length-none") |
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279 | set(PALM_LINKER_OPTIONS "\${PALM_COMPILER_OPTIONS}") |
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280 | set(PALM_CPP_FLAGS "-cpp") |
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281 | list(APPEND PALM_CPP_OPTIONS __gfortran) |
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282 | endif() |
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283 | |
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284 | # workaround |
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285 | list(APPEND PALM_CPP_OPTIONS __parallel) |
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286 | |
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287 | # adding cpp options |
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288 | list(APPEND PALM_CPP_OPTIONS MPI_REAL=MPI_DOUBLE_PRECISION) |
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289 | list(APPEND PALM_CPP_OPTIONS MPI_2REAL=MPI_2DOUBLE_PRECISION) |
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290 | if(NETCDF_FOUND) |
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291 | list(APPEND PALM_CPP_OPTIONS __netcdf) |
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292 | set(PALM_COMPILER_OPTIONS "\${PALM_COMPILER_OPTIONS} -I \${NETCDF_INCLUDES}") |
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293 | set(PALM_LINKER_OPTIONS "\${PALM_LINKER_OPTIONS} \${NETCDF_LIBRARIES}") |
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294 | set(PALMTEST_NETCDF_INCLUDES "netcdf: \"-I \${NETCDF_INCLUDES}\"") |
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295 | set(PALMTEST_NETCDF_LIBRARIES "netcdf: \"\${NETCDF_LIBRARIES}\"") |
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296 | endif() |
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297 | |
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298 | #if(FFTW_FOUND) |
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299 | # list(APPEND PALM_CPP_OPTIONS __fftw) |
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300 | # set(PALM_COMPILER_OPTIONS "\${PALM_COMPILER_OPTIONS} -I \${FFTW_INCLUDES}") |
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301 | # set(PALM_LINKER_OPTIONS "\${PALM_LINKER_OPTIONS} \${FFTW_LIBRARIES}") |
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302 | # set(PALMTEST_FFTW_INCLUDES "fftw: \"-I \${FFTW_INCLUDES}\"") |
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303 | # set(PALMTEST_FFTW_LIBRARIES "fftw: \"\${FFTW_LIBRARIES}\"") |
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304 | #endif() |
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305 | |
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306 | if(RRTMG_ROOT) |
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307 | set(PALMTEST_RRTMG_INCLUDES "rrtmg: \"-I \${RRTMG_ROOT}/include\"") |
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308 | set(PALMTEST_RRTMG_LIBRARIES "rrtmg: \"\${RRTMG_ROOT}/lib/librrtmg.so\"") |
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309 | endif() |
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310 | |
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311 | string(REPLACE ";" " -D" PALM_CPP_OPTIONS_STR_1 "\${PALM_CPP_OPTIONS}") |
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312 | set(PALM_CPP_OPTIONS_STR "\${PALM_CPP_FLAGS} -D\${PALM_CPP_OPTIONS_STR_1}") |
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313 | |
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314 | set(PALM_EXECUTE_COMMAND "mpirun -n {{mpi_tasks}}") |
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315 | |
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316 | # configuring the .palm.config |
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317 | configure_file(\${config_in} \${config} @ONLY) |
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318 | |
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319 | # configuring the palmtest.yml |
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320 | configure_file(\${palmtest_in} \${palmtest} @ONLY) |
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321 | |
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322 | if(RRTMG_ROOT) |
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323 | # configuring the build_rrtmg |
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324 | configure_file(\${build_rrtmg_in} \${build_rrtmg} @ONLY) |
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325 | endif() |
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326 | |
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327 | EOF |
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328 | |
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329 | cat > ${source_dir}/FindFFTW.cmake << EOF |
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330 | # - Find FFTW |
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331 | # Find the native FFTW includes and library |
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332 | # |
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333 | # FFTW_INCLUDES - where to find fftw3.h |
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334 | # FFTW_LIBRARIES - List of libraries when using FFTW. |
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335 | # FFTW_FOUND - True if FFTW found. |
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336 | |
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337 | if (FFTW_INCLUDES) |
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338 | # Already in cache, be silent |
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339 | set (FFTW_FIND_QUIETLY TRUE) |
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340 | endif (FFTW_INCLUDES) |
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341 | |
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342 | #exec_program(sed ARGS -i '/%fftw_inc.*/d' \${config}) |
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343 | #list(APPEND NETCDF_HINTS "\$ENV{LD_LIBRARY_PATH}") |
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344 | |
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345 | find_path (FFTW_INCLUDES fftw3.f03 HINTS \${NETCDF_HINTS} ENV LD_LIBRARY_PATH PATH_SUFFIXES include Include) |
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346 | find_library(NETCDF_FORTRAN_LIB netcdff HINTS \${NETCDF_HINTS} ENV LD_LIBRARY_PATH PATH_SUFFIXES lib lib64) |
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347 | |
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348 | find_library (FFTW_LIBRARIES NAMES fftw3) |
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349 | |
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350 | # handle the QUIETLY and REQUIRED arguments and set FFTW_FOUND to TRUE if |
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351 | # all listed variables are TRUE |
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352 | include (FindPackageHandleStandardArgs) |
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353 | find_package_handle_standard_args (FFTW DEFAULT_MSG FFTW_LIBRARIES FFTW_INCLUDES) |
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354 | |
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355 | mark_as_advanced (FFTW_LIBRARIES FFTW_INCLUDES) |
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356 | |
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357 | EOF |
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358 | |
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359 | cat > ${source_dir}/FindNetCDF.cmake << EOF |
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360 | # - Find NetCDF |
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361 | # Find the native NetCDF includes and library |
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362 | # |
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363 | # NETCDF_INCLUDES - where to find netcdf.h, etc |
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364 | # NETCDF_LIBRARIES - Link these libraries when using NetCDF |
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365 | # NETCDF_FOUND - True if NetCDF found including required interfaces (see below) |
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366 | # |
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367 | # Your package can require certain interfaces to be FOUND by setting these |
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368 | # |
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369 | # NETCDF_C - require the C interface and link the C library |
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370 | # NETCDF_CXX - require the C++ interface and link the C++ library |
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371 | # NETCDF_FORTRAN - require the Fortran interface and link the Fortran library |
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372 | # |
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373 | # The following are not for general use and are included in |
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374 | # NETCDF_LIBRARIES if the corresponding option above is set. |
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375 | # |
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376 | # NETCDF_LIBRARIES_C - Just the C interface |
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377 | # NETCDF_LIBRARIES_CXX - C++ interface, if available |
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378 | # NETCDF_LIBRARIES_FORTRAN - Fortran 90 interface, if available |
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379 | # |
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380 | # Normal usage would be: |
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381 | # set (NETCDF_FORTRAN "YES") |
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382 | # find_package (NetCDF REQUIRED) |
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383 | # target_link_libraries (uses_f90_interface \${NETCDF_LIBRARIES}) |
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384 | |
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385 | if (NETCDF_INCLUDES AND NETCDF_LIBRARIES) |
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386 | # Already in cache, be silent |
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387 | set (NETCDF_FIND_QUIETLY TRUE) |
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388 | endif (NETCDF_INCLUDES AND NETCDF_LIBRARIES) |
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389 | |
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390 | |
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391 | macro(NETCDF_CONFIG flag output) |
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392 | if(NETCDF_CONFIG_EXECUTABLE) |
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393 | exec_program( \${NETCDF_CONFIG_EXECUTABLE} ARGS \${flag} |
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394 | OUTPUT_VARIABLE \${output} RETURN_VALUE return_value) |
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395 | if(NOT \${return_value} EQUAL 0 ) |
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396 | message( STATUS "Unable to determine \${flag} from \${NETCDF_CONFIG_EXECUTABLE}." ) |
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397 | endif() |
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398 | endif(NETCDF_CONFIG_EXECUTABLE) |
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399 | endmacro() |
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400 | |
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401 | if(NETCDF_C_ROOT) |
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402 | list(APPEND NETCDF_HINTS "\${NETCDF_C_ROOT}") |
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403 | else() |
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404 | list(APPEND NETCDF_HINTS "\$ENV{NETCDF_ROOT}") |
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405 | endif() |
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406 | |
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407 | if(NETCDF_FORTRAN_ROOT) |
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408 | list(APPEND NETCDF_HINTS "\${NETCDF_FORTRAN_ROOT}") |
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409 | else() |
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410 | list(APPEND NETCDF_HINTS "\$ENV{NETCDF_ROOT}") |
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411 | endif() |
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412 | |
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413 | if(NETCDF_C_ROOT) |
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414 | find_program(NETCDF_C_CONFIG_EXECUTABLE NAMES nc-config |
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415 | HINTS \${NETCDF_HINTS} PATH_SUFFIXES bin Bin NO_DEFAULT_PATH |
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416 | DOC "NETCDF CONFIG PROGRAM. Used to detect NETCDF compile flags." ) |
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417 | else() |
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418 | find_program(NETCDF_C_CONFIG_EXECUTABLE NAMES nc-config |
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419 | HINTS \${NETCDF_HINTS} PATH_SUFFIXES bin Bin |
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420 | DOC "NETCDF CONFIG PROGRAM. Used to detect NETCDF compile flags." ) |
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421 | endif() |
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422 | |
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423 | set(NETCDF_CONFIG_EXECUTABLE \${NETCDF_C_CONFIG_EXECUTABLE}) |
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424 | if(NETCDF_C_CONFIG_EXECUTABLE) |
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425 | NETCDF_CONFIG(--cc NETCDF_C_COMPILER_C) |
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426 | NETCDF_CONFIG(--fc NETCDF_C_COMPILER_FORTRAN) |
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427 | NETCDF_CONFIG(--prefix NETCDF_C_ROOT) |
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428 | NETCDF_CONFIG(--includedir NETCDF_C_INCLUDE) |
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429 | NETCDF_CONFIG(--version NETCDF_C_VERSION) |
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430 | #NETCDF_CONFIG(--has-c++ NETCDF_C_CXX) |
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431 | #NETCDF_CONFIG(--has-f77 NETCDF_C_F77) |
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432 | NETCDF_CONFIG(--has-f90 NETCDF_C_F90) |
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433 | #NETCDF_CONFIG(--has-dap NETCDF_C_DAP) |
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434 | #NETCDF_CONFIG(--has-nc2 NETCDF_C_NC2) |
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435 | #NETCDF_CONFIG(--has-nc4 NETCDF_C_NC4) |
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436 | #NETCDF_CONFIG(--has-hdf4 NETCDF_C_HDF4) |
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437 | #NETCDF_CONFIG(--has-hdf5 NETCDF_C_HDF5) |
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438 | #NETCDF_CONFIG(--has-pnetcdf NETCDF_C_PARALLEL) |
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439 | list(APPEND NETCDF_INCLUDE_HINTS "\${NETCDF_C_INCLUDE}") |
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440 | list(APPEND NETCDF_HINTS "\${NETCDF_C_ROOT}") |
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441 | message(STATUS "Found \${NETCDF_C_VERSION} compiled with \${NETCDF_C_COMPILER_C}") |
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442 | else(NETCDF_C_CONFIG_EXECUTABLE) |
---|
443 | message(STATUS "nc-config not found") |
---|
444 | endif(NETCDF_C_CONFIG_EXECUTABLE) |
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445 | |
---|
446 | if(NETCDF_C_ROOT AND NETCDF_FORTRAN_ROOT) |
---|
447 | find_program(NETCDF_FORTRAN_CONFIG_EXECUTABLE NAMES nf-config |
---|
448 | HINTS \${NETCDF_HINTS} PATH_SUFFIXES bin Bin NO_DEFAULT_PATH |
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449 | DOC "NETCDF CONFIG PROGRAM. Used to detect NETCDF compile flags." ) |
---|
450 | else() |
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451 | find_program(NETCDF_FORTRAN_CONFIG_EXECUTABLE NAMES nf-config |
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452 | HINTS \${NETCDF_HINTS} PATH_SUFFIXES bin Bin |
---|
453 | DOC "NETCDF CONFIG PROGRAM. Used to detect NETCDF compile flags." ) |
---|
454 | endif() |
---|
455 | |
---|
456 | set(NETCDF_CONFIG_EXECUTABLE \${NETCDF_FORTRAN_CONFIG_EXECUTABLE}) |
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457 | if(NETCDF_FORTRAN_CONFIG_EXECUTABLE) |
---|
458 | NETCDF_CONFIG(--cc NETCDF_FORTRAN_COMPILER_C) |
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459 | NETCDF_CONFIG(--fc NETCDF_FORTRAN_COMPILER_FORTRAN) |
---|
460 | NETCDF_CONFIG(--prefix NETCDF_FORTRAN_ROOT) |
---|
461 | NETCDF_CONFIG(--includedir NETCDF_FORTRAN_INCLUDE) |
---|
462 | NETCDF_CONFIG(--version NETCDF_FORTRAN_VERSION) |
---|
463 | #NETCDF_CONFIG(--has-c++ NETCDF_FORTRAN_CXX) |
---|
464 | #NETCDF_CONFIG(--has-f77 NETCDF_FORTRAN_F77) |
---|
465 | NETCDF_CONFIG(--has-f90 NETCDF_FORTRAN_F90) |
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466 | #NETCDF_CONFIG(--has-dap NETCDF_FORTRAN_DAP) |
---|
467 | #NETCDF_CONFIG(--has-nc2 NETCDF_FORTRAN_NC2) |
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468 | #NETCDF_CONFIG(--has-nc4 NETCDF_FORTRAN_NC4) |
---|
469 | #NETCDF_CONFIG(--has-hdf4 NETCDF_FORTRAN_HDF4) |
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470 | #NETCDF_CONFIG(--has-hdf5 NETCDF_FORTRAN_HDF5) |
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471 | #NETCDF_CONFIG(--has-pnetcdf NETCDF_FORTRAN_PARALLEL) |
---|
472 | list(APPEND NETCDF_INCLUDE_HINTS "\${NETCDF_FORTRAN_INCLUDE}") |
---|
473 | list(APPEND NETCDF_HINTS "\${NETCDF_FORTRAN_ROOT}") |
---|
474 | message(STATUS "Found \${NETCDF_FORTRAN_VERSION} compiled with \${NETCDF_FORTRAN_COMPILER_FORTRAN}") |
---|
475 | else(NETCDF_FORTRAN_CONFIG_EXECUTABLE) |
---|
476 | #message(STATUS "nf-config not found") |
---|
477 | set(NETCDF_FORTRAN_COMPILER_C \${NETCDF_C_COMPILER_C}) |
---|
478 | set(NETCDF_FORTRAN_COMPILER_FORTRAN \${NETCDF_C_COMPILER_FORTRAN}) |
---|
479 | set(NETCDF_FORTRAN_ROOT \${NETCDF_C_ROOT}) |
---|
480 | set(NETCDF_FORTRAN_INCLUDE \${NETCDF_C_INCLUDE}) |
---|
481 | set(NETCDF_FORTRAN_VERSION \${NETCDF_C_VERSION}) |
---|
482 | #set(NETCDF_FORTRAN_CXX \${NETCDF_C_CXX}) |
---|
483 | #set(NETCDF_FORTRAN_F77 \${NETCDF_C_F77}) |
---|
484 | set(NETCDF_FORTRAN_F90 \${NETCDF_C_F90}) |
---|
485 | #set(NETCDF_FORTRAN_DAP \${NETCDF_C_DAP}) |
---|
486 | #set(NETCDF_FORTRAN_NC2 \${NETCDF_C_NC2}) |
---|
487 | #set(NETCDF_FORTRAN_NC4 \${NETCDF_C_NC4}) |
---|
488 | #set(NETCDF_FORTRAN_HDF4 \${NETCDF_C_HDF4}) |
---|
489 | #set(NETCDF_FORTRAN_HDF5 \${NETCDF_C_HDF5}) |
---|
490 | #set(NETCDF_FORTRAN_PARALLEL \${NETCDF_C_PARALLEL}) |
---|
491 | if(NETCDF_FORTRAN_F90) |
---|
492 | message(STATUS "Found \${NETCDF_FORTRAN_VERSION} compiled with \${NETCDF_FORTRAN_COMPILER_FORTRAN}") |
---|
493 | else(NETCDF_FORTRAN_F90) |
---|
494 | message(STATUS "nc-config found no netCDF Fortran libraries") |
---|
495 | endif(NETCDF_FORTRAN_F90) |
---|
496 | endif(NETCDF_FORTRAN_CONFIG_EXECUTABLE) |
---|
497 | |
---|
498 | # find netcdf c |
---|
499 | if(NOT NETCDF_C_INCLUDE) |
---|
500 | find_path(NETCDF_C_INCLUDE netcdf.h HINTS \${NETCDF_HINTS} PATH_SUFFIXES include Include) |
---|
501 | endif() |
---|
502 | find_library(NETCDF_C_LIB netcdf HINTS \${NETCDF_HINTS} PATH_SUFFIXES lib lib64) |
---|
503 | #message(STATUS "NETCDF_C_INCLUDE so far: \${NETCDF_C_INCLUDE}") |
---|
504 | #message(STATUS "NETCDF_C_LIB so far: \${NETCDF_C_LIB}") |
---|
505 | |
---|
506 | # find netcdf fortran |
---|
507 | if(NOT NETCDF_FORTRAN_INCLUDE) |
---|
508 | find_path(NETCDF_FORTRAN_INCLUDE netcdf.mod HINTS \${NETCDF_HINTS} PATH_SUFFIXES include Include) |
---|
509 | endif() |
---|
510 | find_library(NETCDF_FORTRAN_LIB netcdff HINTS \${NETCDF_HINTS} PATH_SUFFIXES lib lib64) |
---|
511 | if(NOT NETCDF_FORTRAN_LIB) |
---|
512 | find_library(NETCDF_FORTRAN_LIB netcdf HINTS \${NETCDF_HINTS} PATH_SUFFIXES lib lib64) |
---|
513 | endif() |
---|
514 | #message(STATUS "NETCDF_FORTRAN_INCLUDE so far: \${NETCDF_FORTRAN_INCLUDE}") |
---|
515 | #message(STATUS "NETCDF_FORTRAN_LIB so far: \${NETCDF_FORTRAN_LIB}") |
---|
516 | |
---|
517 | if ((NOT NETCDF_C_LIB) OR (NOT NETCDF_C_INCLUDE)) |
---|
518 | message(STATUS "Trying to find NetCDF using LD_LIBRARY_PATH (we're desperate)...") |
---|
519 | file(TO_CMAKE_PATH "\$ENV{LD_LIBRARY_PATH}" LD_LIBRARY_PATH) |
---|
520 | find_library(NETCDF_C_LIB NAMES netcdf HINTS \${LD_LIBRARY_PATH}) |
---|
521 | |
---|
522 | if (NETCDF_C_LIB) |
---|
523 | get_filename_component(NETCDF_LIB_DIR \${NETCDF_C_LIB} PATH) |
---|
524 | string(REGEX REPLACE "/lib/?\$" "/include" NETCDF_H_HINT \${NETCDF_LIB_DIR}) |
---|
525 | find_path (NETCDF_C_INCLUDE netcdf.h HINTS \${NETCDF_H_HINT} DOC "Path to netcdf.h") |
---|
526 | message(STATUS "found netcdf.h in: \${NETCDF_C_INCLUDE}") |
---|
527 | list(APPEND NETCDF_INCLUDE_HINTS "\${NETCDF_C_INCLUDE}") |
---|
528 | endif() |
---|
529 | endif() |
---|
530 | |
---|
531 | get_filename_component (NETCDF_C_LIB_DIR "\${NETCDF_C_LIB}" PATH) |
---|
532 | get_filename_component (NETCDF_FORTRAN_LIB_DIR "\${NETCDF_FORTRAN_LIB}" PATH) |
---|
533 | list(APPEND NETCDF_LIB_HINTS "\${NETCDF_C_LIB_DIR}") |
---|
534 | list(APPEND NETCDF_LIB_HINTS "\${NETCDF_FORTRAN_LIB_DIR}") |
---|
535 | |
---|
536 | #message(STATUS "All include Hints: \${NETCDF_INCLUDE_HINTS}") |
---|
537 | #message(STATUS "All lib Hints: \${NETCDF_LIB_HINTS}") |
---|
538 | |
---|
539 | macro(NetCDF_add_interface lang) |
---|
540 | if(NETCDF_\${lang}) |
---|
541 | if(NETCDF_\${lang}_INCLUDE AND NETCDF_\${lang}_LIB) |
---|
542 | list(INSERT NetCDF_includes 0 \${NETCDF_\${lang}_INCLUDE}) |
---|
543 | list(INSERT NetCDF_libs 0 \${NETCDF_\${lang}_LIB}) # prepend so that -lnetcdf is last |
---|
544 | else() |
---|
545 | set(NetCDF_has_interfaces "NO") |
---|
546 | message(STATUS "Failed to find NetCDF interface for \${lang}") |
---|
547 | endif() |
---|
548 | endif(NETCDF_\${lang}) |
---|
549 | endmacro(NetCDF_add_interface) |
---|
550 | |
---|
551 | set(NetCDF_has_interfaces "YES") # will be set to NO if we're missing any interfaces |
---|
552 | NetCDF_add_interface(C) |
---|
553 | NetCDF_add_interface(CXX) |
---|
554 | NetCDF_add_interface(FORTRAN) |
---|
555 | |
---|
556 | # macro (NetCDF_check_interface lang header libs) |
---|
557 | # if (NETCDF_\${lang}) |
---|
558 | # find_path (NETCDF_INCLUDES_\${lang} NAMES \${header} HINTS \${NETCDF_HINTS} PATH_SUFFIXES include Include NO_DEFAULT_PATH) |
---|
559 | # find_library (NETCDF_LIBRARIES_\${lang} NAMES \${libs} HINTS \${NETCDF_HINTS} PATH_SUFFIXES lib lib64 NO_DEFAULT_PATH) |
---|
560 | # mark_as_advanced (NETCDF_INCLUDES_\${lang} NETCDF_LIBRARIES_\${lang}) |
---|
561 | # if (NETCDF_INCLUDES_\${lang} AND NETCDF_LIBRARIES_\${lang}) |
---|
562 | # list (INSERT NetCDF_libs 0 \${NETCDF_LIBRARIES_\${lang}}) # prepend so that -lnetcdf is last |
---|
563 | # else (NETCDF_INCLUDES_\${lang} AND NETCDF_LIBRARIES_\${lang}) |
---|
564 | # set (NetCDF_has_interfaces "NO") |
---|
565 | # message (STATUS "Failed to find NetCDF interface for \${lang}") |
---|
566 | # endif (NETCDF_INCLUDES_\${lang} AND NETCDF_LIBRARIES_\${lang}) |
---|
567 | # endif (NETCDF_\${lang}) |
---|
568 | # endmacro (NetCDF_check_interface) |
---|
569 | # |
---|
570 | # set (NetCDF_has_interfaces "YES") # will be set to NO if we're missing any interfaces |
---|
571 | # NetCDF_check_interface (C netcdf.h netcdf) |
---|
572 | # NetCDF_check_interface (CXX netcdfcpp.h netcdf_c++) |
---|
573 | # NetCDF_check_interface (FORTRAN netcdf.mod netcdff) |
---|
574 | |
---|
575 | set (NETCDF_C_COMPILER "\${NETCDF_C_COMPILER_C}" CACHE STRING "The C compiler used to build netCDF") |
---|
576 | set (NETCDF_FORTRAN_COMPILER "\${NETCDF_FORTRAN_COMPILER_FORTRAN}" CACHE STRING "The Fortran compiler used to build netCDF") |
---|
577 | set (NETCDF_INCLUDES "\${NetCDF_includes}" CACHE STRING "All NetCDF includes required for interface level") |
---|
578 | set (NETCDF_LIBRARIES "\${NetCDF_libs}" CACHE STRING "All NetCDF libraries required for interface level") |
---|
579 | |
---|
580 | # handle the QUIETLY and REQUIRED arguments and set NETCDF_FOUND to TRUE if |
---|
581 | # all listed variables are TRUE |
---|
582 | include (FindPackageHandleStandardArgs) |
---|
583 | find_package_handle_standard_args (NetCDF DEFAULT_MSG NETCDF_LIBRARIES NETCDF_INCLUDES NetCDF_has_interfaces) |
---|
584 | |
---|
585 | mark_as_advanced (NETCDF_LIBRARIES NETCDF_INCLUDES) |
---|
586 | |
---|
587 | #message(STATUS "netCDF library: \${NETCDF_LIBRARIES}") |
---|
588 | #message(STATUS "netCDF include: \${NETCDF_INCLUDES}") |
---|
589 | |
---|
590 | EOF |
---|
591 | |
---|
592 | cat > ${source_dir}/.palmtest.yml.in << EOF |
---|
593 | --- |
---|
594 | # this is a palmtest environments file |
---|
595 | |
---|
596 | palm_config_template: |
---|
597 | |
---|
598 | environments: |
---|
599 | |
---|
600 | @CMAKE_Fortran_COMPILER_ID@: |
---|
601 | executable: @CMAKE_Fortran_COMPILER@ |
---|
602 | mpi_wrapper: @MPI_Fortran_COMPILER@ |
---|
603 | include: |
---|
604 | @PALMTEST_NETCDF_INCLUDES@ |
---|
605 | @PALMTEST_FFTW_INCLUDES@ |
---|
606 | @PALMTEST_RRTMG_INCLUDES@ |
---|
607 | lib: |
---|
608 | @PALMTEST_NETCDF_LIBRARIES@ |
---|
609 | @PALMTEST_FFTW_LIBRARIES@ |
---|
610 | @PALMTEST_RRTMG_LIBRARIES@ |
---|
611 | |
---|
612 | EOF |
---|
613 | |
---|
614 | cat > ${source_dir}/build_rrtmg.in << EOF |
---|
615 | #!/usr/bin/env bash |
---|
616 | |
---|
617 | make -f Makefile F90=@MPI_Fortran_COMPILER@ PROG=librrtmg F90FLAGS="@PALM_COMPILER_OPTIONS@" |
---|
618 | |
---|
619 | EOF |
---|
620 | |
---|
621 | |
---|
622 | } |
---|
623 | |
---|
624 | ################################################################################ |
---|
625 | |
---|
626 | palm_installer_build |
---|
627 | palm_installer_set_path |
---|
628 | palm_installer_test_suite |
---|
629 | palm_post_installer_help |
---|