| [5] | 1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN"> |
|---|
| [62] | 2 | <html><head> |
|---|
| [197] | 3 | <meta http-equiv="CONTENT-TYPE" content="text/html; charset=windows-1252"><title>PALM chapter 4.5.6</title> <meta name="GENERATOR" content="StarOffice 7 (Win32)"> <meta name="AUTHOR" content="Siegfried Raasch"> <meta name="CREATED" content="20041029;13171001"> <meta name="CHANGED" content="20041117;12013945"> <meta name="KEYWORDS" content="parallel LES model"> <style> |
|---|
| [62] | 4 | <!-- |
|---|
| 5 | @page { size: 21cm 29.7cm } |
|---|
| 6 | --> |
|---|
| 7 | </style></head> |
|---|
| 8 | <body style="direction: ltr;" lang="en-US"><h4 style="line-height: 100%;"><font size="4">4.5.6 |
|---|
| 9 | Plots of compressed |
|---|
| [5] | 10 | 3d volume data with AVS</font></h4> |
|---|
| [62] | 11 | <p style="line-height: 100%;">Files containing 3d volume |
|---|
| 12 | data usually |
|---|
| [5] | 13 | need large amounts of disc space. For parallel runs, the disc space |
|---|
| 14 | requirement can |
|---|
| 15 | be clearly reduced if the data are output in compressed format (note: |
|---|
| 16 | currently a data |
|---|
| 17 | compression is permitted only for parallel runs on Cray-T3E). Data |
|---|
| 18 | compression |
|---|
| [62] | 19 | can switched on by setting the initialization parameter <a href="chapter_4.2.html#do3d_compress">do3d_compress</a> |
|---|
| 20 | = <i>.TRUE.</i> and by assigning the desired accuracy |
|---|
| 21 | (number of |
|---|
| [197] | 22 | significant digits) via <a href="chapter_4.2.html#do3d_comp_prec">do3d_comp_prec</a>. |
|---|
| [5] | 23 | A separate accuracy must be assigned for each individual quantity. |
|---|
| 24 | Using uncompressed data, each grid point value is |
|---|
| 25 | represented by a 32-bit real number, in case of compression the grid |
|---|
| 26 | point values are represented by integers whose length depends |
|---|
| 27 | on the desired accuracy (in general clearly smaller than 32 bits). |
|---|
| 28 | The individual grid point values are packed into 32-bit integers and |
|---|
| 29 | output. To plot these compressed data the following output command must |
|---|
| 30 | be inserted into the |
|---|
| [62] | 31 | <span style="font-weight: bold;">mrun</span> |
|---|
| 32 | configuration file<b> </b>(in |
|---|
| [5] | 33 | addition to the steps described |
|---|
| 34 | in <a href="chapter_4.5.5.html">chapter |
|---|
| 35 | 4.5.5</a>): </p> |
|---|
| [62] | 36 | <ul> <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">OC:[[ -f PLOT3D_COMPRESSED ]] && tar cf PLOT3D_DATA PLOT3D_DATA_*</font></pre></ul> |
|---|
| 37 | <p style="line-height: 100%;">If a file named <tt><font style="font-size: 10pt;" size="2">PLOT3D_COMPRESSED</font></tt> |
|---|
| 38 | exists in the local working directory, <tt><font face="Thorndale, serif">t</font></tt><font face="Thorndale, serif">he |
|---|
| 39 | files produ</font>ced by the individual processors are packed |
|---|
| 40 | into one |
|---|
| [5] | 41 | file (<tt><font style="font-size: 10pt;" size="2">PLOT3D_DATA</font></tt>) |
|---|
| 42 | using the "tar" |
|---|
| 43 | command. The flag file |
|---|
| [62] | 44 | <tt><font size="2">PLOT3D_COMPRESSED </font></tt>is |
|---|
| 45 | created by PALM |
|---|
| [5] | 46 | whenever data in compressed form is to be output. For |
|---|
| 47 | uncompressed output, the individual files have to be joined via the |
|---|
| 48 | program <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font> |
|---|
| [62] | 49 | </tt>. In this case, an additional output command is also |
|---|
| 50 | necessary |
|---|
| [5] | 51 | (see chapter 4.5.5). For compressed output, this output command may |
|---|
| 52 | remain |
|---|
| [62] | 53 | unchanged in the configuration file, since <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font></tt> |
|---|
| [5] | 54 | recognizes the |
|---|
| [62] | 55 | ex<font face="Thorndale, serif">isten</font>ce of <tt><font style="font-size: 10pt;" size="2">PLOT3D_COMPRESSED</font></tt> |
|---|
| [5] | 56 | and carries out no actions in such cases. </p> |
|---|
| [62] | 57 | <p style="line-height: 100%;">The file connection |
|---|
| 58 | statements for the |
|---|
| [5] | 59 | local file <a href="chapter_3.4.html#PLOT3D_DATA">PLOT3D_DATA</a> |
|---|
| 60 | and all further necessary statements to create plots of 3d volume |
|---|
| 61 | data can be found in <a href="chapter_4.5.5.html">chapter |
|---|
| 62 | 4.5.5</a>. </p> |
|---|
| [62] | 63 | <p style="line-height: 100%;">After been transferred to |
|---|
| 64 | the local |
|---|
| [5] | 65 | computer |
|---|
| 66 | of the user, the tar file with the compressed data cannot be read |
|---|
| [62] | 67 | with the usual <span style="font-weight: bold;">AVS</span> |
|---|
| 68 | module |
|---|
| 69 | “read field”. Alternatively, |
|---|
| 70 | the module “read_compressed_field” particularly |
|---|
| 71 | developed |
|---|
| [5] | 72 | for this purpose must be used. This module is located in a module |
|---|
| 73 | library under: </p> |
|---|
| [62] | 74 | <pre style="margin-bottom: 0.5cm; line-height: 100%;"><font style="font-size: 10pt;" size="2">http://www.muk.uni-hannover.de/~raasch/PALM_group/AVS/Libraries/palm</font></pre><p style="line-height: 100%;">This module must be loaded within |
|---|
| 75 | AVS |
|---|
| [5] | 76 | (network editor - > module |
|---|
| 77 | tools - > read module library) and then it can be used like all |
|---|
| [62] | 78 | other modules. <a href="http://www.muk.uni-hannover.de/institut/people/raasch/PALM_group/AVS/Doc/read_compressed_field.html">Further |
|---|
| [5] | 79 | information</a> about using this module is available (e.g. for |
|---|
| [62] | 80 | accelerated treatment of compressed data with <span style="font-weight: bold;">AVS</span> the module |
|---|
| 81 | <a href="http://www.muk.uni-hannover.de/institut/people/raasch/PALM_group/AVS/Doc/write_compressed_field.html">write_compressed_field</a> |
|---|
| [5] | 82 | is available). <br> |
|---|
| 83 | <br> |
|---|
| 84 | </p> |
|---|
| [62] | 85 | <hr><p style="line-height: 100%;"><br> |
|---|
| 86 | <font color="#000080"><font color="#000080"><a href="chapter_4.5.5.html"><font color="#000080"><img src="left.gif" name="Grafik1" align="bottom" border="2" height="32" width="32"></font></a><a href="index.html"><font color="#000080"><img src="up.gif" name="Grafik2" align="bottom" border="2" height="32" width="32"></font></a><a href="chapter_4.5.7.html"><font color="#000080"><img src="right.gif" name="Grafik3" align="bottom" border="2" height="32" width="32"></font></a></font></font></p><p style="line-height: 100%;"> <i>Last |
|---|
| 87 | change: </i> $Id: chapter_4.5.6.html 197 2008-09-16 15:29:03Z letzel $</p> |
|---|
| 88 | </body></html> |
|---|
