[5] | 1 | <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> |
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[48] | 2 | <html><head> |
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[62] | 3 | <meta content="text/html; charset=ISO-8859-1" http-equiv="content-type"><title>chapter_3.4</title> </head> |
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| 4 | <body><h3 style="line-height: 100%;"><font color="#000000">3.4 Input and |
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[5] | 5 | output files</font></h3> |
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[62] | 6 | <p style="line-height: 100%;"></p><p style="line-height: 100%;"><font color="#000000">The |
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| 7 | model works |
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[5] | 8 | with a set of files, which are all located in the temporary working |
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| 9 | directory and which are either expected at the beginning of the run |
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| 10 | (the so-called input files) or which are |
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| 11 | produced during the run and/or at the end of the simulation (output |
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| 12 | files).</font><font color="#800000"> |
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[62] | 13 | <font color="#000000">The following table lists all |
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| 14 | default files |
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[5] | 15 | addressed by the model. They are arranged according to the |
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| 16 | associated FORTRAN unit (unit number).</font> </font><font color="#000000">The |
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| 17 | unit 90 is used for different files, which are opened only briefly |
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| 18 | and uniquely in the model and closed directly afterwards. |
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[62] | 19 | Unit numbers 101 - 109, 111 - 113, and 116 refer to data files |
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| 20 | which have NetCDF format. |
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[5] | 21 | These are not opened by a FORTRAN-OPEN-statement but by a corresponding |
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| 22 | NetCDF call (NF90_CREATE or NF90_OPEN). These files are only created on |
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| 23 | machines where a NetCDF library is available.<br> |
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[62] | 24 | </font></p><p style="line-height: 100%;"><font color="#000000">The file |
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[5] | 25 | names described in the list correspond to the names indicated in the |
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| 26 | respective OPEN instruction, i.e. the files are expected and saved |
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| 27 | under these names in the temporary working directory of the model. By |
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| 28 | default, file names are always written in capital letters. The |
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| 29 | third column indicates whether it is an input or output file (I |
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| 30 | and/or O). The NetCDF files can be both input and output files (I/O). |
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| 31 | If restart jobs shall append data to an existing NetCDF file (created |
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| 32 | by a previous job of the job chain), the respective file has to be |
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[62] | 33 | given as an input file (see also <a href="../app/chapter_4.5.1.html">chapter |
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| 34 | 4.5.1</a> which gives more details about the PALM-NetCDF-output).</font> |
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| 35 | </p> |
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| 36 | <p style="line-height: 100%;"> </p><p style="line-height: 100%;"><font color="#000000">On |
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| 37 | parallel |
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[5] | 38 | computers many of the files are read and/or written by the central |
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| 39 | processing element 0 (PE0) only. These files have processor-independent |
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| 40 | content (and therefore they can be read or written by other |
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| 41 | PEs just as well). However, certain files have processor-dependent |
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| 42 | content. For the binary output of data for restart runs (local file |
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| 43 | <a href="#BINOUT">BINOUT</a>), |
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[62] | 44 | for example, <font color="#000000">each PE outputs only |
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| 45 | the data of |
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[5] | 46 | its subdomain. So each processing element writes |
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| 47 | into its own file with its own file name. These files lie in a |
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| 48 | subdirectory of the temporary working directory. Their names are build |
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| 49 | off from the underline ("_ ") and the four digit |
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| 50 | processor ID. The data written for restart runs would be e.g. on the |
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| 51 | files BINOUT/_0000 (PE0), BINOUT/_0001 (PE1), BINOUT/_0002 (PE2) etc. |
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| 52 | Such files, which have processor-dependent content on parallel |
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| 53 | computers, are marked in the following list by the fact, that to the |
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[62] | 54 | file name a line (”/“) is attached. If appropriate |
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| 55 | output |
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| 56 | files are to be copied through <b>mrun</b> to permanent |
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| 57 | files, and/or |
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[5] | 58 | files with processor-dependent content are supposed to be copied as |
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| 59 | input files into the temporary working directory of the model, you have |
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| 60 | to indicate a special file attribute in the appropriate file |
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| 61 | connection statement </font>(see <a href="http://www.muk.uni-hannover.de/institut/software/mrun_beschreibung.html#arpe">arpe</a>, |
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| 62 | <a href="http://www.muk.uni-hannover.de/institut/software/mrun_beschreibung.html#flpe">flpe</a> |
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| 63 | <font color="#000000">in the <b>mrun </b>description).</font><font color="#800000"> |
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[62] | 64 | </font><font color="#000000">Then the permanent file |
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| 65 | name will be |
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[5] | 66 | interpreted as a directory name, in which the input files are |
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| 67 | expected and/or to which output files are written. The file names in |
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| 68 | these directories are always named _0000, _0001, _0002 etc. </font> |
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[62] | 69 | </font></p><font color="#000000"><font color="#000000">For internal use, |
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[5] | 70 | the model may open a set of further files, which are not |
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| 71 | defined by the user but contain no usable information and |
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| 72 | therefore are not included in this list. <br> |
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[62] | 73 | <br></font> |
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| 74 | <table style="text-align: left; width: 100%;" border="1" cellpadding="2" cellspacing="2"> <tbody> <tr valign="top"> <td width="8%"> <p><font size="4"><b>Unit</b></font></p> </td> |
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| 75 | <td width="12%"> <p><font size="4"><b>Name</b></font></p> |
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| 76 | </td> <td width="4%"> <p><font size="4"><b>I/O</b></font></p> |
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| 77 | </td> <td width="9%"> <p><font size="4"><b>Format</b></font></p> |
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| 78 | </td> <td colspan="1" width="67%"> <p><font size="4"><b>Description/contents</b></font></p> |
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| 79 | </td> </tr> <tr valign="top"> <td style="text-align: center;" width="8%"> 11<br> </td> |
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| 80 | <td width="12%"> <p><a name="PARIN"></a>PARIN</p> |
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| 81 | </td> <td width="4%"> <p align="center">I</p> |
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| 82 | </td> <td style="width: 9%;"> <p>ASCII/ |
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| 83 | <br>NAMELIST</p> </td> <td colspan="1" width="67%"> <p><font color="#000000">Parameter |
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| 84 | for model steering. This file |
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[5] | 85 | is needed by the model in each case. Its content and structure is |
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| 86 | described in detail in</font> <a href="chapter_4.0.html">chapter |
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| 87 | 4.0</a>. <a href="chapter_4.4.html">Chapter |
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[62] | 88 | 4.4</a> <font color="#000000">shows a simple |
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| 89 | example. </font> </p> </td> </tr> <tr valign="top"> <td style="text-align: center;" width="8%"> <p align="center">13</p> </td> |
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| 90 | <td width="12%"> <p><a name="BININ"></a>BININ/</p> |
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| 91 | </td> <td width="4%"> <p align="center">I</p> |
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| 92 | </td> <td width="9%"> <p>Binary</p> </td> |
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| 93 | <td colspan="1" width="67%"> <p>Binary data, |
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| 94 | which are read in by the model at the beginning |
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[5] | 95 | of a restart run (see <a href="chapter_3.3.html">chapter |
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[62] | 96 | 3.3</a>). The appropriate file must have been written by the |
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| 97 | preceding |
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[5] | 98 | job of the job chain (see <a href="#BINOUT">BINOUT</a>). |
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| 99 | This file contains the initial parameters (see <a href="chapter_4.1.html">chapter |
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[62] | 100 | 4.1</a>) of the job chain, arrays of the prognostic and |
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| 101 | diagnostic |
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[5] | 102 | variables as well as those parameters and variables for plots of |
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| 103 | horizontally averaged vertical profiles (see <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>), |
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| 104 | which have been determined by the job chain so far. Concerning runs on |
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| 105 | several processors it has to be noted that each processing element |
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| 106 | reads its own file and the file content is processor-dependent. The |
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| 107 | number of processors which can be used must not be changed during a job |
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[62] | 108 | chain and/or if a job chain is continued. </p> <p>Knowledge |
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| 109 | of the file structure is usually not necessary, |
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[5] | 110 | because the file is produced and also read again by the model, but it |
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| 111 | can be useful for error determination in case of read errors . |
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| 112 | Therefore the file structure is described in the following. </p> |
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[62] | 113 | <p>The first record of this file contains a version number (ten |
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[5] | 114 | character string) of the subroutine, which, which output the data that |
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| 115 | follows (write_var_list.f90). This number has to |
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| 116 | agree with the version number subroutine which is reading the file |
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| 117 | (read_var_list.f90) in case of a restart run. Otherwise the model run |
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| 118 | is aborted. Version numbers are changed whenever new code revisions |
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[62] | 119 | require a change of the file format. </p> <p>Starting |
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| 120 | from the second record, all initial parameters follow |
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[5] | 121 | (exception: <a href="chapter_4.1.html#initializing_actions">initializing_actions</a>), |
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| 122 | whereby each parameter fills two records. In the first record the name |
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| 123 | of the parameter is saved as a character string (30 characters long, |
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| 124 | short names are filled by trailing blanks, longer names are cut off at |
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| 125 | the end), in the second record the value (or the values) of the |
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| 126 | parameter follow. The sequence of parameters on the file may be |
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| 127 | arbitrary, however the first and second variable must be <a href="chapter_4.1.html#nz">nz</a> |
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| 128 | and <a href="chapter_4.1.html#statistic_regions">statistic_regions</a>. |
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| 129 | If a variable with unknown name is found the model run is |
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[62] | 130 | aborted. </p> <p>At the end of the initial |
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| 131 | parameters a record with the string "<i>*** |
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| 132 | end ***</i>"follows (filled up with trailing blanks up to a |
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| 133 | length of |
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| 134 | 30 characters). </p> <p>Afterwards the fields |
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| 135 | of the prognostic and diagnostic |
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[5] | 136 | variables follow. This part of the file also begins with a record |
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| 137 | consisting of a character string of length 10, which contains the |
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| 138 | version number of the subroutine that wrote the arrays that follow |
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| 139 | (write_3d_binary.f90). It must agree with the number of the reading |
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[62] | 140 | subroutine (read_3d_binary.f90). </p> <p>The |
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| 141 | following record contains the number of processors which |
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[5] | 142 | were used in the model run producing this file, the processor ID of the |
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| 143 | special processor, which creates the file, as well as the lower and |
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| 144 | upper array indices of the subdomain belonging to this processing |
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| 145 | element. If no complete agreement with the values of the current model |
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| 146 | run exists, then this is aborted. This examination must be made in |
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| 147 | particular on parallel computers, because the jobs of a job chain |
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| 148 | always have to use the same number of processors and the same virtual |
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[62] | 149 | processor grid. </p> <p>After these tests the |
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| 150 | individual arrays as well as parameters |
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[5] | 151 | and variables for plots of horizontally averaged vertical profiles |
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| 152 | follow. Like the initialization parameters, they consist of two |
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| 153 | records. In the first record, the name of the array or the variable |
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| 154 | (character string, consisting of 20 characters, filled with trailing |
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| 155 | blanks) is located, in the second one its values follow. The sequence |
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| 156 | of the individual variables may be arbitrary again. The parameters for |
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| 157 | the plot and the respective variables are only read in if for the run |
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| 158 | parameter <a href="chapter_4.2.html#use_prior_plot1d_parameters">use_prior_plot1d_parameters</a> |
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[62] | 159 | = <i>.TRUE</i> is selected, otherwise they will be |
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| 160 | skipped. </p> <p>At the end of the file there |
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| 161 | has to be a record with the |
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| 162 | character string "<span style="font-style: italic;"></span><i>*** |
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| 163 | end |
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[5] | 164 | ***</i>"(filled up with trailing blanks up to a length of 20 |
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[62] | 165 | characters).</p> </td> </tr> <tr valign="top"> |
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| 166 | <td style="text-align: center;" width="8%"> <p align="center">14</p> </td> <td width="12%"> |
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| 167 | <p><a name="BINOUT"></a>BINOUT/</p> </td> |
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| 168 | <td width="4%"> <p align="center">O</p> |
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| 169 | </td> <td width="9%"> <p>Binary</p> </td> |
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| 170 | <td colspan="1" width="67%"> <p>Binary data, |
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| 171 | which are written by the model at the end of the |
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[5] | 172 | run and possibly needed by restart runs (see <a href="chapter_3.3.html">chapter |
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[62] | 173 | 3.3</a>) for the initialization. This output file is then read in |
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| 174 | as |
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[5] | 175 | file <a href="#BININ">BININ</a>. |
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| 176 | It contains the initial parameters (see <a href="chapter_4.1.html">chapter |
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[62] | 177 | 4.1</a>) of the model run, arrays of the prognostic and |
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| 178 | diagnostic |
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[5] | 179 | variables as well as those parameters determined so far during a job |
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| 180 | chain and variables for plots of horizontally averaged vertical |
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| 181 | profiles (see <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>). |
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| 182 | With runs on several processors it has to be noted that each processing |
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| 183 | element writes its own file and the file content is |
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| 184 | processor-dependent. A specification of the file format can be found in |
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| 185 | the |
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[62] | 186 | description of the file <a href="#BININ">BININ</a>. |
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| 187 | </p> <p>The file BINOUT is written by the model only if, |
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| 188 | with the help |
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| 189 | of the <b>mrun</b>-configuration file, the <font face="Thorndale, serif">value</font> <span style="font-family: monospace;">true</span> is |
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| 190 | assigned for the |
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[5] | 191 | environment |
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| 192 | variable <span style="font-size: 10pt; font-family: monospace;">write_binary</span> |
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| 193 | (see <a href="chapter_3.3.html">chapter |
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[62] | 194 | 3.3</a>). </p> <p>With large grid point |
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| 195 | numbers the file BINOUT (or the |
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[5] | 196 | files residing in directory BINOUT/) will be very large and should |
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| 197 | be stored (if available) on the archive system of the remote computer.</p> |
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[62] | 198 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">15<br> |
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| 199 | </td> <td style="vertical-align: top;"><a name="RUN_CONTROL"></a>RUN_CONTROL</td> <td style="vertical-align: top;">O</td> <td style="vertical-align: top;">Ascii</td> <td colspan="1" width="67%"> <p>This file contains |
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| 200 | the so-called time step control output of |
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[5] | 201 | the model. At certain temporal intervals, which are described by the |
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| 202 | run |
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| 203 | parameter <a href="chapter_4.1.html#dt_run_control">dt_run_control</a>, |
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| 204 | a line with the values of certain control parameters is written into |
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| 205 | this |
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| 206 | file. Additionally, such a control line is always written, whenever the |
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| 207 | time step of the model changes. All data and quantities always refer to |
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[62] | 208 | the entire model domain. </p> <p>If the |
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| 209 | 1D-model is switched on for the initialization of the |
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[5] | 210 | 3D-models, then control lines are likewise written into this file at |
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| 211 | certain temporal intervals (see <a href="chapter_4.1.html#dt_run_control_1d">dt_run_control_1d</a>). |
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[62] | 212 | </p> <p>By default, the file RUN_CONTROL only lists |
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| 213 | information |
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[5] | 214 | about the selected model parameters at the beginning of the |
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| 215 | initial run. These informations are written at the beginnning of a run. |
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| 216 | They correspond to those of the file <a href="#HEADER">HEADER</a> |
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| 217 | (however without data concerning the consumed CPU time, because these |
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| 218 | are |
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| 219 | only known at the end of a run). With the run parameter <a href="chapter_4.2.html#force_print_header">force_print_header</a> |
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| 220 | it can be achieved that this information is also written at the |
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| 221 | beginning of the file RUN_CONTROL at restart runs. </p> |
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[62] | 222 | <p>The individual columns of the 1D - time step control output |
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[5] | 223 | have the following meaning (listed by the respective heading of the |
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| 224 | appropriate |
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[62] | 225 | column in the file): <br> </p> <table style="text-align: left; width: 100%;" cellpadding="2"> |
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| 226 | <tbody> <tr> <td style="vertical-align: top;">ITER.</td> |
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| 227 | <td style="vertical-align: top;">Number of time steps |
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| 228 | accomplished so far</td> </tr> <tr> <td style="vertical-align: top;">HH:MM:SS</td> <td style="vertical-align: top;">Time (in hours: minutes: |
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| 229 | seconds)</td> </tr> <tr> <td style="vertical-align: top;">DT</td> <td style="vertical-align: top;">Time step (in s)</td> </tr> |
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| 230 | <tr> <td style="vertical-align: top;">UMAX</td> |
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| 231 | <td style="vertical-align: top;">Maximum absolute wind |
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[5] | 232 | velocity |
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[62] | 233 | (u-component) (in m/s)</td> </tr> <tr> <td style="vertical-align: top;">VMAX</td> <td style="vertical-align: top;">Maximum absolute wind |
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[5] | 234 | velocity |
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[62] | 235 | (v-component) (in m/s)</td> </tr> <tr> <td style="vertical-align: top;">U *</td> <td style="vertical-align: top;">Friction velocity (<font color="#000000">in </font>m/s)</td> </tr> |
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| 236 | <tr> <td style="vertical-align: top;">ALPHA</td> |
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| 237 | <td style="vertical-align: top;">Angle of the wind vector |
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[5] | 238 | (to the x-axis) at the top of the |
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| 239 | Prandtl layer (k=1) (<font color="#000000">in </font>degrees)</td> |
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[62] | 240 | </tr> <tr> <td style="vertical-align: middle;">ENERG.</td> |
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| 241 | <td style="vertical-align: top;">Kinetic energy of the |
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[5] | 242 | 1D-model (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>), |
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[62] | 243 | averaged over all grid points</td> </tr> </tbody> </table> |
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| 244 | <p> |
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[5] | 245 | The individual columns of the 3D - time step control output |
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| 246 | have the following meaning (listed by the respective heading of the |
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| 247 | appropriate |
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[62] | 248 | column in the file):<br> </p> <table style="text-align: left; width: 100%;" cellpadding="2"> |
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| 249 | <tbody> <tr> <td style="vertical-align: top;">RUN</td> |
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| 250 | <td style="vertical-align: top;">Serial-number of the job |
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[5] | 251 | in the job chain. The initial |
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| 252 | run has the number 0, restart runs accordingly have larger numbers.</td> |
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[62] | 253 | </tr> <tr> <td style="vertical-align: top;">ITER.</td> |
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| 254 | <td style="vertical-align: top;">Number of time steps |
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[5] | 255 | accomplished since starting time t=0 of |
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[62] | 256 | the initial run.</td> </tr> <tr> <td style="vertical-align: top;">HH:MM:SS</td> <td style="vertical-align: top;">Time (<font color="#000000">in |
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| 257 | </font>hours: minutes: |
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[5] | 258 | seconds) since starting time t=0 of the |
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[62] | 259 | initial run.</td> </tr> <tr> <td style="vertical-align: top;">DT (E)</td> <td style="vertical-align: top;">Time step (<font color="#000000">in </font>s). The |
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[5] | 260 | following character indicates whether the |
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| 261 | time |
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| 262 | step is limited by the advection criterion (A) or the diffusion |
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| 263 | criterion (D). After changes of the time step a further character |
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| 264 | follows, |
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| 265 | which indicates with which time step procedure the changed time step |
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| 266 | was accomplished (<span style="font-family: monospace;">L:</span> |
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[62] | 267 | Leapfrog, <span style="font-family: monospace;">E:</span> |
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| 268 | Euler). This |
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[5] | 269 | does |
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[62] | 270 | not apply for the default Runge-Kutta timestep scheme.</td> </tr> |
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| 271 | <tr> <td style="vertical-align: top;">UMAX</td> |
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| 272 | <td style="vertical-align: top;">Maximum absolute wind |
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| 273 | velocity (u-component) (<font color="#000000">in </font>m/s). |
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| 274 | If at |
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[5] | 275 | the |
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| 276 | appropriate output time a random disturbance was added to the |
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| 277 | horizontal velocity field (see <a href="chapter_4.2.html#create_disturbances">create_disturbances</a>), |
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| 278 | the character D will appear directly after the velocity value.</td> |
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[62] | 279 | </tr> <tr> <td style="vertical-align: top;">VMAX</td> |
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| 280 | <td style="vertical-align: top;">Maximum absolute wind |
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| 281 | velocity (v-component) (<font color="#000000">in </font>m/s). |
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| 282 | If at |
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[5] | 283 | the |
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| 284 | appropriate output time a random disturbance was added to the |
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| 285 | horizontal velocity field (see <a href="chapter_4.2.html#create_disturbances">create_disturbances</a>), |
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| 286 | the character D will appear directly after the velocity value.</td> |
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[62] | 287 | </tr> <tr> <td style="vertical-align: top;">WMAX</td> |
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| 288 | <td style="vertical-align: top;">Maximum absolute wind |
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[5] | 289 | velocity (w-component) (<font color="#000000">in </font>m/s).</td> |
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[62] | 290 | </tr> <tr> <td style="vertical-align: top;">U |
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| 291 | *</td> <td style="vertical-align: top;">Horizontal |
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| 292 | average of the |
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[5] | 293 | friction velocity (<font color="#000000">in </font>m/s).</td> |
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[62] | 294 | </tr> <tr> <td style="vertical-align: top;">W |
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| 295 | *</td> <td style="vertical-align: top;">Convective |
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| 296 | velocity scale |
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| 297 | (<font color="#000000">in </font>m/s). The assumed |
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| 298 | boundary layer |
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| 299 | height is determined via the heat flux minimum criterion.</td> </tr> |
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| 300 | <tr> <td style="vertical-align: top;">THETA *</td> |
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| 301 | <td style="vertical-align: top;">Characteristic |
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| 302 | temperature |
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[5] | 303 | of the Prandtl - layer (<font color="#000000">in </font>K).</td> |
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[62] | 304 | </tr> <tr> <td style="vertical-align: top;">Z_I</td> |
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| 305 | <td style="vertical-align: top;">Height of the convective |
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| 306 | boundary layer (<font color="#000000">in </font>m), |
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| 307 | determined via |
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| 308 | the criterion of the heat flux minimum.</td> </tr> <tr> |
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| 309 | <td style="vertical-align: middle;">ENERG.</td> <td style="vertical-align: top;">Average resolved total |
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[5] | 310 | energy of the flow field (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>), |
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[62] | 311 | normalized with the total number of grid points.</td> </tr> |
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| 312 | <tr> <td style="vertical-align: middle;">DISTENERG</td> |
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| 313 | <td style="vertical-align: top;">Average resolved |
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| 314 | disturbance energy of flow field (<font color="#000000">in |
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| 315 | </font>m<sup>2</sup>/s<sup>2</sup>), |
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| 316 | normalized with the total number of grid points.</td> </tr> |
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| 317 | <tr> <td style="vertical-align: top;">DIVOLD</td> |
---|
| 318 | <td style="vertical-align: top;"><font color="#000000">Divergence |
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[5] | 319 | of the velocity field (sum of |
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[62] | 320 | the absolute values) (</font><font color="#000000">in |
---|
| 321 | </font><font color="#000000">1/s) before call of the |
---|
| 322 | pressure solver, |
---|
[5] | 323 | normalized with the total number of grid points.</font></td> |
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[62] | 324 | </tr> <tr> <td style="vertical-align: top;">DIVNEW</td> |
---|
| 325 | <td style="vertical-align: top;"><font color="#000000">Divergence |
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[5] | 326 | of the velocity field (sum of |
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[62] | 327 | the absolute values) (</font><font color="#000000">in |
---|
| 328 | </font><font color="#000000">1/s) after call of the |
---|
| 329 | pressure solver, normalized</font> |
---|
| 330 | with the total number of grid points.</td> </tr> <tr> |
---|
| 331 | <td style="vertical-align: top;">UMAX (KJI)</td> <td style="vertical-align: top;">Indices of the grid point |
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[5] | 332 | with the maximum absolute |
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[62] | 333 | u-component of the wind velocity (sequence: k, j, i).</td> </tr> |
---|
| 334 | <tr> <td style="vertical-align: top;">VMAX (KJI)</td> |
---|
| 335 | <td style="vertical-align: top;">Indices of the grid point |
---|
[5] | 336 | with the maximum absolute |
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[62] | 337 | v-component of the wind velocity (sequence: k, j, i).</td> </tr> |
---|
| 338 | <tr> <td style="vertical-align: top;">WMAX (KJI)</td> |
---|
| 339 | <td style="vertical-align: top;">Indices of the grid point |
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[5] | 340 | with the maximum absolute |
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[62] | 341 | w-component of the wind velocity (sequence: k, j, i).</td> </tr> |
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| 342 | <tr> <td style="vertical-align: top;">ADVECX</td> |
---|
| 343 | <td style="vertical-align: top;">Distance (<font color="#000000">in </font>km) the |
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[5] | 344 | coordinate system has been moved in |
---|
| 345 | x-direction with Galilei-Transformation switched on (see <a href="chapter_4.1.html#galilei_transformation">galilei_transformation</a>).</td> |
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[62] | 346 | </tr> <tr> <td style="vertical-align: top;">ADVECY</td> |
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| 347 | <td style="vertical-align: top;">Distance (<font color="#000000">in </font>km) the |
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[5] | 348 | coordinate system has been moved in |
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| 349 | y-direction with Galilei-Transformation switched on (see <a href="chapter_4.1.html#galilei_transformation">galilei_transformation</a>).</td> |
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[62] | 350 | </tr> </tbody> </table> </td> </tr> <tr> |
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| 351 | <td style="vertical-align: top; text-align: center;">16<br> |
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| 352 | </td> <td style="vertical-align: top;"><a name="LIST_PROFIL"></a>LIST_PROFIL </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii<br> </td> <td style="vertical-align: top;">This file contains horizontally |
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[5] | 353 | (and possibly temporally) |
---|
| 354 | averaged vertical profiles of some model variables. The quantities |
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| 355 | saved are set model-internally and can not be determined by the user. |
---|
| 356 | At each output time (see <a href="chapter_4.2.html#dt_dopr_listing">dt_dopr_listing</a>) |
---|
| 357 | two tables are written to the file consecutively. The first contains |
---|
| 358 | variables which are defined on the scalar / u-v-grid-levels, the |
---|
| 359 | second table contains variables which are defined on the w-grid-levels. |
---|
| 360 | If subdomains were defined with the initialization parameter <a href="chapter_4.1.html#statistic_regions">statistic_regions </a>for |
---|
| 361 | additional statistic evaluation, then the tables |
---|
| 362 | described above are written for each individual subdomain. The name of |
---|
| 363 | the respective subdomain (see <a href="chapter_4.3.html#region">region</a>) |
---|
| 364 | appears in the header of the respective table. <br> |
---|
| 365 | In each case the tables consist of a header, followed by the |
---|
| 366 | profiles arranged next to each other in columns. The header contains |
---|
| 367 | some basic information of the respective run (model version, run |
---|
| 368 | identifier consisting of |
---|
| 369 | basic file name and number of the job in the job chain, executing |
---|
| 370 | computer, date, time of the beginning of the run, name of the |
---|
| 371 | subdomain, output time, kind of averaging). On the u-v-level the |
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[62] | 372 | following columns are written: <br> <table style="text-align: left; width: 100%;" cellpadding="2"> |
---|
| 373 | <tbody> <tr> <td style="text-align: left; vertical-align: middle;">k<br> |
---|
| 374 | </td> <td style="text-align: left; vertical-align: middle;">Vertical |
---|
| 375 | grid point index.</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">zu<br> |
---|
| 376 | </td> <td style="text-align: left; vertical-align: middle;">Height |
---|
[5] | 377 | of the grid point |
---|
| 378 | level (<font color="#000000">in </font>m).</td> |
---|
[62] | 379 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">u<br> |
---|
| 380 | </td> <td style="text-align: left; vertical-align: middle;">u-component |
---|
[5] | 381 | of the wind |
---|
| 382 | velocity (<font color="#000000">in </font>m/s).</td> |
---|
[62] | 383 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">du<br> |
---|
| 384 | </td> <td style="text-align: left; vertical-align: middle;">Deviation |
---|
[5] | 385 | of the |
---|
| 386 | u-component from the initial profile at the |
---|
[62] | 387 | time t=0 (initialization profile) (<font color="#000000">in |
---|
| 388 | </font>m/s).</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">v<br> |
---|
| 389 | </td> <td style="text-align: left; vertical-align: middle;">v-component |
---|
[5] | 390 | of the wind |
---|
| 391 | velocity (<font color="#000000">in </font>m/s).</td> |
---|
[62] | 392 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">dv<br> |
---|
| 393 | </td> <td style="text-align: left; vertical-align: middle;">Deviation |
---|
[5] | 394 | of the |
---|
| 395 | v-component from the initial profile at the |
---|
[62] | 396 | time t=0 (initialization profile) (<font color="#000000">in |
---|
| 397 | </font>m/s).</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">pt |
---|
| 398 | <br> </td> <td style="text-align: left; vertical-align: middle;">Potential |
---|
[5] | 399 | temperature (<font color="#000000">in </font>K).</td> |
---|
[62] | 400 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">dpt<br> |
---|
| 401 | </td> <td style="text-align: left; vertical-align: middle;">Deviation |
---|
[5] | 402 | of potential |
---|
| 403 | temperature from the initial profile at |
---|
[62] | 404 | the time t=0 (initialization profile) (<font color="#000000">in |
---|
| 405 | </font>K).</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">e<br> |
---|
| 406 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 407 | kinetic energy |
---|
| 408 | (subgrid-scale) (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
[62] | 409 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">Km<br> |
---|
| 410 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 411 | diffusion |
---|
| 412 | coefficient for momentum (<font color="#000000">in </font>m<sup>2</sup>/s).</td> |
---|
[62] | 413 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">Kh<br> |
---|
| 414 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 415 | diffusion |
---|
| 416 | coefficient for heat (<font color="#000000">in </font>m<sup>2</sup>/s).</td> |
---|
[62] | 417 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">l<br> |
---|
| 418 | </td> <td style="text-align: left; vertical-align: middle;">Mixing |
---|
[5] | 419 | length (<font color="#000000">in </font>m).</td> |
---|
[62] | 420 | </tr> <tr> <td style="vertical-align: top;"><br> |
---|
| 421 | </td> <td style="vertical-align: top;"><br> </td> |
---|
| 422 | </tr> </tbody> </table> |
---|
| 423 | On the w-level the following columns are written:<br> <br> |
---|
| 424 | <table style="text-align: left; width: 100%;" cellpadding="2"> |
---|
| 425 | <tbody> <tr> <td style="vertical-align: middle;">k<br> |
---|
| 426 | </td> <td style="vertical-align: middle;">Vertical |
---|
| 427 | grid point |
---|
| 428 | index.</td> </tr> <tr> <td style="vertical-align: middle;">zw<br> </td> <td style="vertical-align: middle;">Height of the grid |
---|
[5] | 429 | point |
---|
| 430 | level (<font color="#000000">in </font>m).</td> |
---|
[62] | 431 | </tr> <tr> <td style="vertical-align: middle;">w'pt'</td> |
---|
| 432 | <td style="vertical-align: middle;">Vertical subgrid-scale |
---|
| 433 | kinematic heat flux (<font color="#000000">in </font>K |
---|
| 434 | m/s).</td> </tr> <tr> <td style="vertical-align: middle;">wpt</td> <td style="vertical-align: middle;">Vertical total ( |
---|
[5] | 435 | subgrid-scale + resolved) |
---|
[62] | 436 | kinematic heat flux (<font color="#000000">in </font>K |
---|
| 437 | m/s).</td> </tr> <tr> <td style="vertical-align: middle;">w'u'</td> <td style="vertical-align: middle;">u-component of the |
---|
| 438 | vertical subgrid-scale momentum flux (<font color="#000000">in |
---|
| 439 | </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
| 440 | </tr> <tr> <td style="vertical-align: middle;">wu</td> |
---|
| 441 | <td style="vertical-align: middle;">u-component of the |
---|
[5] | 442 | total |
---|
| 443 | vertical momentum flux ( |
---|
| 444 | subgrid-scale + resolved) (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
[62] | 445 | </tr> <tr> <td style="vertical-align: middle;">w'v'</td> |
---|
| 446 | <td style="vertical-align: middle;">v-component of the |
---|
| 447 | vertical subgrid-scale momentum flux (<font color="#000000">in |
---|
| 448 | </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
| 449 | </tr> <tr> <td style="vertical-align: middle;">wv</td> |
---|
| 450 | <td style="vertical-align: middle;">v-component of the |
---|
[5] | 451 | total |
---|
| 452 | vertical momentum flux ( |
---|
| 453 | subgrid-scale + resolved) (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
[62] | 454 | </tr> </tbody> </table> <br> </td> </tr> |
---|
| 455 | <tr> <td style="vertical-align: top; text-align: center;">17 |
---|
| 456 | </td> <td style="vertical-align: top;"><a name="LIST_PROFIL_1D"></a>LIST_PROFIL_1D </td> <td style="vertical-align: top;">O </td> <td style="vertical-align: top;">Ascii </td> <td style="vertical-align: top;">This file contains the vertical |
---|
[5] | 457 | profiles calculated by the |
---|
| 458 | 1D-model within initial runs. The quantities saved are set |
---|
| 459 | model-internally and cannot be determined by the user. At the |
---|
| 460 | respective output times (see <a href="chapter_4.1.html#dt_pr_1d">dt_pr_1d</a>) |
---|
| 461 | a table with the following information is written to the file: The |
---|
| 462 | table header contains some basic information of the respective run |
---|
| 463 | (model version, run identifier consisting of basic file name and number |
---|
| 464 | of the job in the |
---|
| 465 | job chain (this number should always be 00, because the 1D-model is |
---|
| 466 | only switched on at initial runs), executing computer, date, |
---|
| 467 | time of the beginning of the run, output time). Afterwards the |
---|
[62] | 468 | following columns appear:<br> <table style="text-align: left; width: 100%;" cellpadding="2"> |
---|
| 469 | <tbody> <tr> <td style="text-align: left; vertical-align: middle;">k<br> |
---|
| 470 | </td> <td style="text-align: left; vertical-align: middle;">Vertical |
---|
| 471 | grid point index.</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">zu<br> |
---|
| 472 | </td> <td style="text-align: left; vertical-align: middle;">Height |
---|
[5] | 473 | of the grid point |
---|
| 474 | level (<font color="#000000">in </font>m).</td> |
---|
[62] | 475 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">u<br> |
---|
| 476 | </td> <td style="text-align: left; vertical-align: middle;">u-component |
---|
[5] | 477 | of the wind |
---|
| 478 | velocity (<font color="#000000">in </font>m/s).</td> |
---|
[62] | 479 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">v<br> |
---|
| 480 | </td> <td style="text-align: left; vertical-align: middle;">v-component |
---|
[5] | 481 | of the wind |
---|
| 482 | velocity (<font color="#000000">in </font>m/s).</td> |
---|
[62] | 483 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">pt<br> |
---|
| 484 | </td> <td style="text-align: left; vertical-align: middle;">Potential |
---|
[5] | 485 | temperature (<font color="#000000">in </font>K).</td> |
---|
[62] | 486 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">e<br> |
---|
| 487 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 488 | kinetic energy (<font color="#000000">in </font>m<sup>2</sup>/s<sup>2</sup>).</td> |
---|
[62] | 489 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">rif<br> |
---|
| 490 | </td> <td style="text-align: left; vertical-align: middle;">Flux |
---|
| 491 | Richardson number</td> </tr> <tr> <td style="text-align: left; vertical-align: middle;">Km<br> |
---|
| 492 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 493 | diffusion |
---|
| 494 | coefficient for momentum (<font color="#000000">in </font>m<sup>2</sup>/s).</td> |
---|
[62] | 495 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">Kh<br> |
---|
| 496 | </td> <td style="text-align: left; vertical-align: middle;">Turbulent |
---|
[5] | 497 | diffusion |
---|
| 498 | coefficient for heat (<font color="#000000">in </font>m<sup>2</sup>/s).</td> |
---|
[62] | 499 | </tr> <tr> <td style="text-align: left; vertical-align: middle;">l<br> |
---|
| 500 | </td> <td style="text-align: left; vertical-align: middle;"><font color="#000000">Mixing |
---|
| 501 | length (</font><font color="#000000">in </font><font color="#000000">m).</font></td> </tr> </tbody> |
---|
| 502 | </table> <br> </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">18 </td> |
---|
| 503 | <td style="vertical-align: top;"><a name="CPU_MEASURES"></a>CPU_MEASURES |
---|
| 504 | </td> <td style="vertical-align: top;">O </td> |
---|
| 505 | <td style="vertical-align: top;">Ascii </td> <td style="vertical-align: top;">Time measurements are |
---|
[5] | 506 | accomplished through the subroutine <span style="font-family: monospace;">cpu_log.f90.</span><span style="font-size: 10pt;"></span> The file |
---|
| 507 | CPU_MEASURES contains a header with some basic information of the |
---|
| 508 | respective run |
---|
| 509 | (model version, run identifier consisting of basic file name and |
---|
| 510 | number of the job in the job chain, executing computer, date, time of |
---|
| 511 | the beginning of the run) and afterwards two tables with data of CPU |
---|
| 512 | times which have been consumed by certain model parts. The model parts |
---|
| 513 | analyzed in the first table do not overlap and the CPU times needed for |
---|
[62] | 514 | them therefore approximately add up to the “total” |
---|
| 515 | value given in the |
---|
[5] | 516 | first line of this table. In the second table (heading: special |
---|
| 517 | measures) overlaps (in particular with the parts described in the first |
---|
| 518 | table) are possible. <br> |
---|
| 519 | For each model part it is indicated in the following columns how much |
---|
| 520 | CPU time was needed (absolutely and relative), and how often it was |
---|
[62] | 521 | called. With runs on several processors the average values of |
---|
| 522 | all |
---|
[5] | 523 | processors are indicated. In the case of parallel runs information for |
---|
| 524 | those processors with the largest and smallest CPU time follow as |
---|
| 525 | well as the standard deviation of all PEs from the average value. With |
---|
| 526 | good |
---|
| 527 | parallelization the CPU times on the individual processors should |
---|
| 528 | differ only little from each other and the standard deviation should be |
---|
[62] | 529 | small. </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">19 </td> |
---|
| 530 | <td style="vertical-align: top;"><a name="HEADER"></a>HEADER |
---|
| 531 | </td> <td style="vertical-align: top;">O </td> |
---|
| 532 | <td style="vertical-align: top;">Ascii </td> <td style="vertical-align: top;"> <p>Information about |
---|
| 533 | the selected model parameters (physical and |
---|
| 534 | numerical values) as well as general information about the |
---|
| 535 | run. </p> <p>This file contains the values of |
---|
| 536 | all important steering |
---|
[5] | 537 | parameters |
---|
| 538 | (numerical procedures, computing grid and model dimensions, boundary |
---|
| 539 | conditions, physical dimension, turbulence quantities, actions during |
---|
| 540 | the simulation, 1D-model-parameters) as well as data concerning the |
---|
| 541 | selected plot and list outputs. The headlines of the file list the |
---|
| 542 | program version used, date and time of the beginning of the run, the |
---|
| 543 | name of the executing computer, the run identifier (corresponds to the |
---|
| 544 | selected base file name) and the number of the run (number of the |
---|
| 545 | restart run). With parallel runs the number of processors as well as |
---|
| 546 | the assigned virtual processor net also appear. After these headlines |
---|
| 547 | run time and time step information appear (point of starting time, |
---|
| 548 | related to t=0 of the initial run, end-time, time actually reached, CPU |
---|
| 549 | time, etc.). If a model run is incorrectly terminated (e.g. |
---|
| 550 | run time error or excess of the permitted CPU time), information over |
---|
| 551 | the time reached and the necessary CPU time is missing (to understand: |
---|
| 552 | the file HEADER is written twice by the model; once briefly after |
---|
| 553 | beginning of the simulation (naturally here the information over the |
---|
| 554 | time reached is missing etc.) and then briefly before the normal end of |
---|
| 555 | the simulation. The second, now complete output overwrites the first |
---|
[62] | 556 | output.). </p> <p>At the end of the file, |
---|
| 557 | information about the values of user |
---|
[5] | 558 | parameters (see <a href="chapter_3.7.html">chapter |
---|
| 559 | 3.7</a> and <a href="targetliste:chapter_1.0.html#chapter%204.3">chapter |
---|
[62] | 560 | 4.3</a>) can be output by the user with the help of the |
---|
| 561 | subroutine <tt><font style="font-size: 11pt;" size="2">user_header</font></tt> |
---|
| 562 | (located in |
---|
[5] | 563 | the file <tt><font style="font-size: 10pt;" size="2">user_interface.f90</font></tt>). |
---|
[62] | 564 | If no user parameters were found, the string “<tt><font style="font-size: 10pt;" size="2">*** no user-defined |
---|
| 565 | variables found</font></tt>” |
---|
[5] | 566 | appears at the end of the file. |
---|
[62] | 567 | If user parameters were indicated, the string “<tt><font style="font-size: 11pt;" size="2">user-defined |
---|
| 568 | variables and actions</font></tt>” |
---|
[5] | 569 | is printed, followed by informations about the user-defined subdomains |
---|
| 570 | for which |
---|
| 571 | profiles and time series are output. All further information to appear |
---|
| 572 | here, must be provided by the user (by appropriate |
---|
[62] | 573 | WRITE statements in <tt><font style="font-size: 10pt;" size="2">user_header</font></tt>).</p> </td> |
---|
| 574 | </tr> <tr> <td style="vertical-align: top; text-align: center;">21 </td> |
---|
| 575 | <td style="vertical-align: top;"><a name="PLOT2D_XY"></a>PLOT2D_XY |
---|
| 576 | </td> <td style="vertical-align: top;">O<br> </td> |
---|
| 577 | <td style="vertical-align: top;">Binary<br> </td> |
---|
| 578 | <td style="vertical-align: top;"> <p>This file |
---|
| 579 | contains data of the two-dimensional horizontal |
---|
[5] | 580 | cross sections written by the model (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
| 581 | in a format readable by <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">ISO2D</a> |
---|
[62] | 582 | (the first record contains the coordinate information <tt><font style="font-size: 11pt;" size="2">dx</font></tt><font style="font-size: 11pt;" size="2">, </font><tt><font style="font-size: 11pt;" size="2">eta</font></tt><font style="font-size: 11pt;" size="2">, </font><tt><font style="font-size: 11pt;" size="2">hu</font></tt><font style="font-size: 11pt;" size="2">, <tt>ho</tt></font>, |
---|
| 583 | then |
---|
[5] | 584 | the individual arrays follow). The data are visualized with the help of |
---|
| 585 | ISO2D using |
---|
| 586 | NAMELIST - parameter sets, which are directly written by the model to |
---|
| 587 | the |
---|
| 588 | local files <a href="#PLOT2D_XY_GLOBAL">PLOT2D_XY_GLOBAL</a> |
---|
[62] | 589 | and <a href="#PLOT2D_XY_LOCAL">PLOT2D_XY_LOCAL</a>. |
---|
| 590 | </p> <p>With parallel runs and choice of <a href="chapter_4.2.html#data_output_2d_on_each_pe">data_output_2d_on_each_pe</a> |
---|
| 591 | = <i>.T.</i> each processing element writes the data of |
---|
| 592 | its subdomain |
---|
| 593 | to a separate file with the name |
---|
| 594 | PLOT2D_XY_<processor-Id>, |
---|
[5] | 595 | whereby <processor-Id> is a four digit number (e.g. |
---|
| 596 | PLOT2D_XY_0000). These files are not suitable for ISO2D, but after the |
---|
| 597 | end |
---|
| 598 | of the model run they can be combined to one file readable by ISO2D |
---|
| 599 | with |
---|
| 600 | the help of the program <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font></tt>. |
---|
| 601 | This tool expects the files of the individual processing |
---|
| 602 | elements under the names described above and outputs the combined file |
---|
| 603 | under the name PLOT2D_XY. Usually it is called by an appropriate OUTPUT |
---|
| 604 | - command (OC:) in the MRUN-configuration file. The tool writes |
---|
| 605 | informative messages about the actions accomplished into the job |
---|
| 606 | protocol (e.g., even if no files were found). |
---|
| 607 | By the call of <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font></tt> |
---|
| 608 | possibly existing files of the other cross sections (xz and/or yz) |
---|
| 609 | and three-dimensional arrays (see <a href="#PLOT3D_DATA">PLOT3D_DATA</a>) |
---|
[62] | 610 | are also combined. </p> <p>Further information |
---|
| 611 | about the output of plots of |
---|
[5] | 612 | two-dimensional cross sections is found in the description of the run |
---|
| 613 | parameter <a href="chapter_4.2.html#data_output">data_output</a>.</p> |
---|
[62] | 614 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">22<br> |
---|
| 615 | </td> <td style="vertical-align: top;"><a name="PLOT2D_XZ"></a>PLOT2D_XZ </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Binary<br> </td> <td style="vertical-align: top;"> <p>This file contains |
---|
| 616 | the data of the xz |
---|
[5] | 617 | cross sections written by the model. </p> |
---|
| 618 | The description of the local file <a href="#PLOT2D_XY">PLOT2D_XY</a> |
---|
[62] | 619 | applies to this file, respectively </td> </tr> <tr> |
---|
| 620 | <td style="vertical-align: top; text-align: center;">23<br> |
---|
| 621 | </td> <td style="vertical-align: top;"><a name="PLOT2D_YZ"></a>PLOT2D_YZ </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Binary<br> </td> <td style="vertical-align: top;"> <p>This file contains |
---|
| 622 | the data of the xz |
---|
[5] | 623 | cross sections written by the model. </p> |
---|
| 624 | The description of the local file <a href="#PLOT2D_XY">PLOT2D_XY</a> |
---|
[62] | 625 | applies to this file, respectively </td> </tr> <tr> |
---|
| 626 | <td style="vertical-align: top; text-align: center;">27<br> |
---|
| 627 | </td> <td style="vertical-align: top;"><a name="PLOT2D_XY_LOCAL"></a>PLOT2D_XY_LOCAL </td> |
---|
| 628 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ NAMELIST<br> </td> |
---|
| 629 | <td style="vertical-align: top;"> <p>NAMELIST - |
---|
| 630 | parameter sets, with which the plot layout of the |
---|
[5] | 631 | data in the local file <a href="#PLOT2D_XY">PLOT2D_XY</a> |
---|
| 632 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">ISO2D</a>. |
---|
| 633 | This file contains the so-called local parameter set (NAMELIST - group |
---|
[62] | 634 | name: &LOCAL) required by ISO2D (one parameter set for each |
---|
| 635 | field |
---|
[5] | 636 | present at the file PLOT2D_XY). After the model run these parameter |
---|
[62] | 637 | sets can be edited by the user, if neccessary. </p> <p>Additionally |
---|
| 638 | ISO2D still needs another so-called global |
---|
[5] | 639 | parameter set. This is saved by the model to the local file <a href="#PLOT2D_XY_GLOBAL">PLOT2D_XY_GLOBAL</a>. |
---|
| 640 | Due to the fact that ISO2D expects global and local parameter sets on |
---|
| 641 | one and the same |
---|
| 642 | file, in fact the global parameter set first, the user has to append |
---|
| 643 | the |
---|
| 644 | contents of the file PLOT2D_XY_LOCAL to the file PLOT2D_XY_GLOBAL |
---|
| 645 | before the call of ISO2D (e.g. by an OUTPUT-command in the |
---|
[62] | 646 | MRUN-configuration file: “PLOT2D_XY_LOCAL >> |
---|
| 647 | PLOT2D_XY_GLOBAL”). |
---|
[5] | 648 | This relatively pedantic proceeding is due to the fact that the model |
---|
| 649 | can produce the file PLOT2D_XY_GLOBAL only at the end of the simulation |
---|
| 650 | (only then e.g. when the final value of the global ISO2D - parameter <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html#PLANZ">planz</a> |
---|
| 651 | is known), while the local parameter sets are written continuously |
---|
[62] | 652 | to the file PLOT2D_XY_LOCAL during the run.</p> </td> </tr> |
---|
| 653 | <tr> <td style="vertical-align: top; text-align: center;">28<br> |
---|
| 654 | </td> <td style="vertical-align: top;"><a name="PLOT2D_XZ_LOCAL"></a>PLOT2D_XZ_LOCAL </td> |
---|
| 655 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ NAMELIST<br> </td> |
---|
| 656 | <td style="vertical-align: top;"> <p>NAMELIST - |
---|
| 657 | parameter sets, with which the plot layout of the |
---|
[5] | 658 | data in the local file <a href="#PLOT2D_XZ">PLOT2D_XZ</a> |
---|
| 659 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">ISO2D</a>. |
---|
[62] | 660 | </p> <p>The description of the local file <a href="#PLOT2D_XY_LOCAL">PLOT2D_XY_LOCAL</a> |
---|
| 661 | applies to this file, respectively. </p> </td> </tr> |
---|
| 662 | <tr> <td style="vertical-align: top; text-align: center;">29<br> |
---|
| 663 | </td> <td style="vertical-align: top;"><a name="PLOT2D_YZ_LOCAL"></a>PLOT2D_YZ_LOCAL </td> |
---|
| 664 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ NAMELIST<br> </td> |
---|
| 665 | <td style="vertical-align: top;"> <p>NAMELIST - |
---|
| 666 | parameter sets, with which the plot layout of the |
---|
[5] | 667 | data in the local file <a href="#PLOT2D_YZ">PLOT2D_YZ</a> |
---|
| 668 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">ISO2D</a>. |
---|
[62] | 669 | </p> <p>The description of the local file <a href="#PLOT2D_XY_LOCAL">PLOT2D_XY_LOCAL</a> |
---|
| 670 | applies to this file, respectively. </p> </td> </tr> |
---|
| 671 | <tr> <td style="vertical-align: top; text-align: center;">30<br> |
---|
| 672 | </td> <td style="vertical-align: top;"><a name="PLOT3D_DATA"></a>PLOT3D_DATA </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Binary<br> </td> <td style="vertical-align: top;"> <p>This file contains |
---|
| 673 | the data of the three-dimensional arrays |
---|
[5] | 674 | (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
| 675 | written by the model in a format readable for the visualization |
---|
| 676 | software AVS. Beyond that AVS |
---|
| 677 | needs coordinate information, which are output into the |
---|
| 678 | local file <a href="#PLOT3D_COOR">PLOT3D_COOR</a>, |
---|
| 679 | as well as the local files <a href="#PLOT3D_FLD">PLOT3D_FLD</a> |
---|
| 680 | and <a href="#PLOT3D_FLD_COOR">PLOT3D_FLD_COOR</a>, |
---|
| 681 | which describe the structure of the files PLOT3D_DATA and PLOT3D_COOR |
---|
| 682 | in the so-called AVS-FLD-format. Due to |
---|
| 683 | the fact that AVS expects these information in only one (so-called FLD |
---|
| 684 | -) file, the content of the file PLOT3D_FLD_COOR must be appended to |
---|
| 685 | the file PLOT3D_FLD by the user after the end of the model run (e.g. |
---|
[62] | 686 | with an appropriate OUTPUT - command in the MRUN - configuration file: "<span style="font-family: monospace;">cat PLOT3D_FLD_COOR |
---|
| 687 | >> PLOT3D_FLD</span>"). </p> <p>With |
---|
| 688 | parallel runs each processing element writes the data of |
---|
[5] | 689 | its subdomain to a separate file with the name |
---|
[62] | 690 | PLOT3D_DATA_<Processor-Id>, where |
---|
| 691 | <Processor-Id> is a |
---|
[5] | 692 | four digit number (e.g. PLOT3D_DATA_0000). These files are not suitable |
---|
| 693 | for AVS, but after the end of the model run they can be combined to one |
---|
| 694 | file readable for AVS with the help of the program <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font></tt>. |
---|
| 695 | This tool expects the files of the individual processing |
---|
| 696 | elements under the names described above and outputs the combined file |
---|
| 697 | into a new file PLOT3D_DATA. Usually it is called by an appropriate |
---|
| 698 | OUTPUT - command in the MRUN-configuration file. The tool |
---|
| 699 | writes informative messages about the accomplished actions into |
---|
| 700 | the job protocol (e.g., even if no files were |
---|
| 701 | found). By the call of <tt><font style="font-size: 10pt;" size="2">combine_plot_fields.x</font></tt> |
---|
| 702 | also possibly existing files with two-dimensional plot data (see e.g. <a href="#PLOT2D_XY">PLOT2D_XY</a>) |
---|
[62] | 703 | are combined. </p> <p>With parallel runs the |
---|
| 704 | output of data of large volume is also |
---|
[5] | 705 | possible in compressed form. For this purpose the initialization |
---|
| 706 | parameter <a href="chapter_4.2.html#do3d_compress">do3d_compress</a> |
---|
[62] | 707 | = <i>.TRUE.</i> must be set and the desired output |
---|
| 708 | accuracy has to be |
---|
[5] | 709 | indicated |
---|
| 710 | with the help of <a href="chapter_4.2.html#do3d_precision">do3d_precision</a>. |
---|
| 711 | In favorable cases the file size can be reduced by |
---|
| 712 | a factor of up to 5. For the visualization of compressed data a special |
---|
| 713 | AVS module (<tt><font style="font-size: 11pt;" size="2">read_compressed_field</font></tt>) |
---|
| 714 | and a further entry in the MRUN-configuration file are needed. More |
---|
| 715 | details can be found in <a href="chapter_4.5.6.html">chapter |
---|
[62] | 716 | 4.5.6</a>.</p> </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">31<br> |
---|
| 717 | </td> <td style="vertical-align: top;"><a name="PLOT3D_COOR"></a>PLOT3D_COOR </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Binary<br> </td> <td style="vertical-align: top;"> <p>Coordinate |
---|
| 718 | information concerning |
---|
[5] | 719 | the three-dimensional arrays (see <a href="#PLOT3D_DATA">PLOT3D_DATA</a>) |
---|
[62] | 720 | needed by the visualization software AVS. </p> <p>The |
---|
| 721 | file PLOT3D_COOR should be saved by the user into the same |
---|
| 722 | permanent directory as the file PLOT3D_DATA. </p> <p>For |
---|
| 723 | parallel runs PLOT3D_COOR is written by PE0 only.</p> </td> |
---|
| 724 | </tr> <tr> <td style="vertical-align: top; text-align: center;">32<br> |
---|
| 725 | </td> <td style="vertical-align: top;"><a name="PLOT3D_FLD"></a>PLOT3D_FLD </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ <br> |
---|
| 726 | AVS-Fld </td> <td style="vertical-align: top;"> <p>AVS-fld-file |
---|
| 727 | describing the three-dimensional |
---|
[5] | 728 | array data, saved by the model into the local file <a href="#PLOT3D_DATA">PLOT3D_DATA</a>, |
---|
[62] | 729 | needed by the visualization software AVS. </p> <p>This |
---|
| 730 | file describes the structure of the file PLOT3D_DATA |
---|
[5] | 731 | (e.g. number of arrays, array dimensions, data type etc.). It uses the |
---|
| 732 | so-called AVS-Fld-format. It also contains the name of the file |
---|
| 733 | (inclusive cycle number, but without path) under which the local file |
---|
| 734 | PLOT3D_DATA is saved (this is the file name given in the file |
---|
[62] | 735 | connection statement of the MRUN – configuration) in the |
---|
| 736 | permanent |
---|
[5] | 737 | directory of the user (possibly on remote computers). Under this name |
---|
| 738 | AVS expects the data which are to be visualized. If there is no file |
---|
| 739 | connection statement for PLOT3D_DATA indicated in the configuration |
---|
[62] | 740 | file, that file (filename) is registered “unknown” |
---|
| 741 | in the file |
---|
[5] | 742 | PLOT3D_FLD and the |
---|
| 743 | actual name must be inserted later by hand. The file PLOT3D_FLD should |
---|
| 744 | be saved by the user in the same permanent directory as PLOT3D_DATA, so |
---|
| 745 | that AVS can find the file PLOT3D_DATA without any problems. If the two |
---|
| 746 | files lie in different directories, then the path name of the file |
---|
[62] | 747 | PLOT3D_DATA must be added. </p> <p>AVS-fld-files |
---|
| 748 | are expected by AVS to have the |
---|
[5] | 749 | suffix "<span style="font-family: monospace;">.fld</span>"<font face="Cumberland, monospace">.</font> |
---|
[62] | 750 | Cycle numbers must not be attached behind this "<span style="font-family: monospace;">.fld</span>" suffix. |
---|
| 751 | This suffix is |
---|
[5] | 752 | attached to the permanent file names (still after |
---|
| 753 | possible cycle numbers) by <span style="font-weight: bold;">mrun</span> |
---|
| 754 | if "<span style="font-family: monospace;">fld</span>" |
---|
| 755 | is indicated in the <a href="http://www.muk.uni-hannover.de/institut/software/mrun_beschreibung.html#Spalte6">column |
---|
[62] | 756 | 6 </a>of the file connection statement. </p> <p>Likewise, |
---|
| 757 | AVS expects information about the coordinate |
---|
[5] | 758 | system underlying the arrays on this file. This information is output |
---|
| 759 | by the model |
---|
| 760 | into the local file <a href="#PLOT3D_FLD_COOR">PLOT3D_FLD_COOR</a>, |
---|
| 761 | whose content the user has to append to the file PLOT3D_FLD after the |
---|
| 762 | end of the model run (e.g. with an appropriate OUTPUT-command in the |
---|
[62] | 763 | MRUN-configuration file: “cat PLOT3D_FLD_COOR |
---|
| 764 | >> |
---|
| 765 | PLOT3D_FLD”). </p> <p>For parallel |
---|
| 766 | runs, PLOT3D_FLD is produced by PE0 only.</p> </td> </tr> |
---|
| 767 | <tr> <td style="vertical-align: top; text-align: center;">33 |
---|
| 768 | </td> <td style="vertical-align: top;"><a name="PLOT3D_FLD_COOR"></a>PLOT3D_FLD_COOR </td> |
---|
| 769 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ <br> |
---|
| 770 | AVS-Fld </td> <td style="vertical-align: top;"> <p>File |
---|
| 771 | for the description of the coordinate information output |
---|
[5] | 772 | by the model into the local file <a href="#PLOT3D_COOR">PLOT3D_COOR</a>, |
---|
| 773 | which is needed for the visualization of three-dimensional array data |
---|
[62] | 774 | by visualization-software AVS. </p> <p>This |
---|
| 775 | file describes the structure of the file PLOT3D_COOR |
---|
[5] | 776 | (e.g. grid spacing, data type etc.) using the so-called AVS-Fld-format. |
---|
| 777 | It also contains the name of the file (inclusive cycle number, but |
---|
| 778 | without path) into which the local file PLOT3D_COOR (this is the file |
---|
| 779 | name described in the file connection statement of the MRUN - |
---|
| 780 | configuration file) is output in the permanent directory of the user |
---|
| 781 | (possibly on remote computers). Under this name AVS expects the data |
---|
| 782 | which are to be visualized. If there is no file connection statement |
---|
| 783 | for |
---|
| 784 | PLOT3D_COOR indicated in the configuration file, that file is |
---|
| 785 | registered as "unknown" in the file |
---|
| 786 | PLOT3D_FLD_COOR and the actual name |
---|
[62] | 787 | must be inserted later by hand. </p> <p>AVS |
---|
| 788 | expects the information contained in the file |
---|
[5] | 789 | PLOT3D_FLD_COOR, as well as the remaining information about the |
---|
| 790 | three-dimensional arrays output by the model (see <a href="#PLOT3D_FLD">PLOT3D_FLD</a>) |
---|
| 791 | in one and the same file. This is satisfied by appending the file |
---|
| 792 | PLOT3D_FLD_COOR after the end of a run are to the |
---|
| 793 | file PLOT3D_FLD (e.g. with an appropriate OUTPUT-command in the |
---|
[62] | 794 | MRUN-configuration file: “cat PLOT3D_FLD_COOR |
---|
| 795 | >> |
---|
| 796 | PLOT3D_FLD”). </p> <p>For parallel |
---|
| 797 | runs, PLOT3D_FLD_COOR is written by PE0 only.</p> </td> </tr> |
---|
| 798 | <tr> <td style="vertical-align: top; text-align: center;"> |
---|
| 799 | <p align="center">40 </p> <p align="center">and/or <br> |
---|
| 800 | possibly </p> <p align="center">40-49</p> |
---|
| 801 | </td> <td style="vertical-align: top;"> <p><a name="PLOT1D_DATA"></a>PLOT1D_DATA </p> |
---|
| 802 | <p>and/or <br> |
---|
[5] | 803 | possibly </p> |
---|
| 804 | PLOT1D_DATA_0 <br> |
---|
[62] | 805 | PLOT1D_DATA_1 </td> <td style="vertical-align: top;">O </td> <td style="vertical-align: top;">Ascii </td> <td style="vertical-align: top;"> <p>This file contains |
---|
| 806 | data (possibly horizontally and/or |
---|
[5] | 807 | temporally averaged) of the vertical profiles (see <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>) |
---|
[62] | 808 | written by the model in a format readable by <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>. |
---|
| 809 | It is created only if <a href="chapter_4.2.html#data_output_format">data_output_format</a> |
---|
| 810 | = <span style="font-style: italic;">'profil'</span> |
---|
| 811 | is assigned. This file's format is suitable to be read by the plot |
---|
| 812 | software <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>. |
---|
[5] | 813 | Each data point of the profiles is output in one single line (1st |
---|
| 814 | column: height in m, 2nd column: value of the respective quantity). |
---|
| 815 | Within the file, data |
---|
| 816 | of the individual profiles are located one behind the other. The order |
---|
| 817 | of the data in the file follows the order used in the assignment for <b>data_output_pr</b> |
---|
| 818 | (<b>data_output_pr</b> = <span style="font-style: italic;">'u'</span>, <span style="font-style: italic;">'v'</span>,… |
---|
| 819 | means that the file starts with the data of the u-component profile, |
---|
[62] | 820 | followed by the v-component profile, etc.). </p> <p><br> |
---|
[5] | 821 | The data can only be visualized with <span style="font-weight: bold;">profil</span> |
---|
| 822 | using NAMELIST-parameter sets, which are saved by the |
---|
[62] | 823 | model into the local file <a href="#PLOT1D_PAR">PLOT1D_PAR</a>. |
---|
| 824 | </p> <p>The profile data written to the file are described |
---|
| 825 | with the |
---|
[5] | 826 | run parameter <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>. |
---|
| 827 | Plots produced with these data using the parameter file PLOT1D_PAR do |
---|
| 828 | not have to contain all these profiles. The profiles which can be drawn |
---|
| 829 | in the plot are described with run parameter <a href="chapter_4.2.html#cross_profiles">cross_profiles</a>. |
---|
| 830 | By subsequent editing of the file PLOT1D_PAR all profiles can be |
---|
| 831 | plotted (also the basic layout of the plots can be |
---|
| 832 | changed). For orientation, each profile existing on the file |
---|
| 833 | PLOT1D_DATA, starts with a comment line, which indicates the |
---|
| 834 | presented variable and the output time. The text of these comment |
---|
| 835 | lines is used as a legend in the plot. The very first line of the file |
---|
| 836 | is a |
---|
| 837 | comment line, containing information about the used model version, the |
---|
| 838 | run identifier (base file name + number of the respective restart |
---|
| 839 | run), the name of the executing computer, as well as the date and time |
---|
| 840 | of the beginning of the run. At the end of this comment line is the |
---|
| 841 | name |
---|
| 842 | of the subdomain, to which the profiles belong (see <a href="chapter_4.1.html#statistic_regions">statistic_regions</a>). |
---|
| 843 | By default, the profiles present averages of the total model domain. If |
---|
| 844 | the model has to produce profiles for other subdomains beyond that, up |
---|
| 845 | to 9 further files (units No. 41-49) are created, whereby the number of |
---|
| 846 | the respective subdomain is attached |
---|
| 847 | to the file name (e.g. PLOT1D_DATA_1). The name of the file with the |
---|
| 848 | data of the total |
---|
[62] | 849 | domain in this case reads PLOT1D_DATA_0. </p> <p>For |
---|
| 850 | presentation in the same plot, profile data of the restart |
---|
[5] | 851 | runs can be attached to existing data of preceding runs of a job chain. |
---|
| 852 | One can do this with the file attribute <a href="http://www.muk.uni-hannover.de/institut/software/mrun_beschreibung.html#tra">tra</a> |
---|
| 853 | in the file connection statement. The model produces a parameter file |
---|
| 854 | (PLOT1D_PAR) for these combined data, if the run parameter is set <a href="chapter_4.2.html#use_prior_plot1d_parameters">use_prior_plot1d_parameters</a> |
---|
[62] | 855 | = <i>.T</i>. If this is omitted, then the parameter file |
---|
| 856 | gives |
---|
[5] | 857 | wrong plots (i.e. <span style="font-family: monospace;">use_prior_plot1d_parameters |
---|
| 858 | = .T.</span> and "<span style="font-family: monospace;">tra</span>" |
---|
[62] | 859 | must be specified together)! </p> <p>Further |
---|
| 860 | information about output of |
---|
[5] | 861 | vertical profile data is given in the description of the run parameter <a href="chapter_4.2.html#data_output_pr">data_output_pr</a>.</p> |
---|
[62] | 862 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">80 </td> |
---|
| 863 | <td style="vertical-align: top;"><a name="PARTICLE_INFOS"></a>PARTICLE_INFOS/ </td> |
---|
| 864 | <td style="vertical-align: top;">O </td> <td style="vertical-align: top;">Ascii </td> <td style="vertical-align: top;">This |
---|
[5] | 865 | file is created in case of particle transport (see the <a href="chapter_4.2.html#particles_package">particles |
---|
[62] | 866 | package</a>). It contains statistical informations about the |
---|
| 867 | number of |
---|
[5] | 868 | particles used and about the number of particles exchanged between each |
---|
| 869 | single PE. These informations are output after every timestep if |
---|
| 870 | switched on by parameter <a href="chapter_4.2.html#write_particle_statistics">write_particle_statistics</a>. |
---|
[62] | 871 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">81 </td> |
---|
| 872 | <td style="vertical-align: top;"><a name="PLOTSP_X_PAR"></a>PLOTSP_X_PAR |
---|
| 873 | </td> <td style="vertical-align: top;">O </td> |
---|
| 874 | <td style="vertical-align: top;">Ascii/<br> |
---|
| 875 | NAMELIST </td> <td style="vertical-align: top;">This |
---|
[5] | 876 | file is created if spectra along x are calculated and output (see the <a href="chapter_4.2.html#particles_package">spectra |
---|
[62] | 877 | package</a>). It contains the NAMELIST parameter set, with which |
---|
| 878 | the |
---|
[5] | 879 | layout of a plot |
---|
| 880 | of the data in the local file <a href="#PLOTSP_X_DATA">PLOTSP_X_DATA</a> |
---|
| 881 | can be steered, if these data are plotted with the plot software <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>.<br> |
---|
[62] | 882 | <p>It contains the so-called RAHMEN (frame)- and |
---|
| 883 | CROSS-parameter sets (NAMELIST- group names <span style="font-style: normal;">&RAHMEN and/or |
---|
| 884 | &CROSS</span>) |
---|
[5] | 885 | needed by <span style="font-weight: bold;">profil</span>. |
---|
| 886 | The user can edit these parameter sets (and thus all details of the |
---|
[62] | 887 | plot layout) after the run.<br> </p> <p>By default, |
---|
| 888 | for one quantity, all spectra at different heights |
---|
[5] | 889 | are plotted into a single panel. Different colors and line styles are |
---|
| 890 | used for each height. Panels of up to four quantities are arranged on |
---|
| 891 | one page in two lines (and two columns). More quantities are plotted on |
---|
| 892 | additional page(s). If there is more than one output time (see <a href="chapter_4.2.html#dt_dosp">dt_dosp</a>), |
---|
| 893 | additional pages will be plotted for each single output time. </p> |
---|
[62] | 894 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">82<br> |
---|
| 895 | </td> <td style="vertical-align: top;"><a name="PLOTSP_X_DATA"></a>PLOTSP_X_DATA </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii<br> </td> <td style="vertical-align: top;">This |
---|
[5] | 896 | file is created if spectra along x are calculated and output (see the <a href="chapter_4.2.html#particles_package">spectra |
---|
| 897 | package</a>). It contains the spectral data along x (see <a href="chapter_4.2.html#data_output_sp">data_output_sp</a>) |
---|
| 898 | in a format readable by <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>. |
---|
| 899 | The data can only be visualized with <span style="font-weight: bold;">profil</span> |
---|
| 900 | using NAMELIST parameter sets, which are written by |
---|
| 901 | the model to the local file <a href="#PLOTSP_X_PAR">PLOTSP_X_PAR</a>.<br> |
---|
[62] | 902 | <br> |
---|
[5] | 903 | Regardless of the (sub)set of spectra specified by <a href="chapter_4.2.html#plot_spectra_level">plot_spectra_level</a> |
---|
| 904 | for actual plotting, this file contains all data of spectra specified |
---|
| 905 | by <a href="chapter_4.2.html#comp_spectra_level">comp_spectra_level</a>.<br> |
---|
[62] | 906 | <br> <font>Each data point of a spectrum is output in a |
---|
| 907 | single line |
---|
[5] | 908 | (1st column: |
---|
| 909 | wavenumber, 2nd column: spectral coefficient). If spectra are to be |
---|
| 910 | calculated and output for more than one height (see </font><font><a href="chapter_4.2.html#comp_spectra_level"><span lang="en-GB"><font face="Thorndale">comp_spectra_level</font></span></a></font><font>), |
---|
| 911 | the spectral coefficients for the further heights can be found in the |
---|
| 912 | subsequent columns. </font>The order |
---|
| 913 | of the data in the file follows the order used in the assignment for <span style="font-style: italic;"></span><span style="font-style: italic;"></span><a href="chapter_4.2.html#data_output_sp">data_output_sp</a>.<br> |
---|
[62] | 914 | <br> |
---|
[5] | 915 | For orientation, a header of comment lines (one for each height level) |
---|
| 916 | is placed in front of the spectral data of each quantity. They indicate |
---|
| 917 | the respective quantity and the output time. The text of these comment |
---|
[62] | 918 | lines is used as a legend in the plot. </td> </tr> <tr> |
---|
| 919 | <td style="vertical-align: top; text-align: center;">83<br> |
---|
| 920 | </td> <td style="vertical-align: top;"><a name="PLOTSP_Y_PAR"></a>PLOTSP_Y_PAR </td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii<br> </td> <td style="vertical-align: top;">This |
---|
[5] | 921 | file is created if spectra along y are calculated and output (see the <a href="chapter_4.2.html#particles_package">spectra |
---|
[62] | 922 | package</a>). It contains the NAMELIST parameter set, with which |
---|
| 923 | the |
---|
[5] | 924 | layout of a plot |
---|
| 925 | of the data in the local file <a href="#PLOTSP_Y_DATA">PLOTSP_Y_DATA</a> |
---|
| 926 | can be steered, if these data are plotted with the plot software <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>.<br> |
---|
[62] | 927 | <br> |
---|
[5] | 928 | For more details see <a href="#PLOTSP_X_PAR">PLOTSP_X_PAR</a>.<br> |
---|
[62] | 929 | </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">84<br> |
---|
| 930 | </td> <td style="vertical-align: top;"><a name="PLOTSP_Y_DATA"></a>PLOTSP_Y_DATA</td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii<br> </td> <td style="vertical-align: top;">This |
---|
[5] | 931 | file is created if spectra along x are calculated and output (see the <a href="chapter_4.2.html#particles_package">spectra |
---|
| 932 | package</a>). It contains the spectral data along y (see <a href="chapter_4.2.html#data_output_sp">data_output_sp</a>) |
---|
| 933 | in a format readable by <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>. |
---|
| 934 | The data can only be visualized with <span style="font-weight: bold;">profil</span> |
---|
| 935 | using NAMELIST parameter sets, which are written by |
---|
| 936 | the model to the local file <a href="#PLOTSP_Y_PAR">PLOTSP_Y_PAR</a>.<br> |
---|
[62] | 937 | <br> |
---|
[5] | 938 | For more details see <a href="#PLOTSP_X_DATA">PLOTSP_X_DATA</a>.</td> |
---|
[62] | 939 | </tr> <tr> <td style="vertical-align: top; text-align: center;">85<br> |
---|
| 940 | </td> <td style="vertical-align: top;"><a name="PARTICLE_DATA"></a>PARTICLE_DATA/</td> <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Binary<br> </td> <td style="vertical-align: top;">This |
---|
[5] | 941 | file is created if particle transport is switched on (see the <a href="chapter_4.2.html#particles_package">particles |
---|
[62] | 942 | package</a>) and contains all particle data for one or several |
---|
| 943 | output |
---|
[5] | 944 | times (see <a href="chapter_4.2.html#dt_write_particle_data">dt_write_particle_data</a>).<br> |
---|
[62] | 945 | <br> |
---|
[5] | 946 | The first record of this file contains an identification string (PALM |
---|
| 947 | version number, run identifier, etc., 80 characters long). The second |
---|
| 948 | record also contains a version string (80 characters long) followed by |
---|
[62] | 949 | two records with particle group informations (see file <span style="font-family: monospace;">check_open.f90</span>). |
---|
| 950 | Then, for each |
---|
[5] | 951 | output time, two records follow, where the first one gives some general |
---|
| 952 | information (numbers of particles, etc.) and the second one contains |
---|
| 953 | the actual particle data. A FORTRAN TYPE structure is used for storing |
---|
| 954 | the particle attributes. See file <span style="font-family: monospace;">advec_particles.f90</span> |
---|
[62] | 955 | for the detailed format.</td> </tr> <tr> <td style="vertical-align: top; text-align: center;">90</td> |
---|
| 956 | <td style="vertical-align: top;"><a name="PARTICLE_RESTART_DATA_IN"></a>PARTICLE_RESTART_<br> |
---|
| 957 | DATA_IN/</td> <td style="vertical-align: top;">I<br> |
---|
| 958 | </td> <td style="vertical-align: top;">Binary<br> |
---|
| 959 | </td> <td style="vertical-align: top;">Binary |
---|
[5] | 960 | data, which are read in by the model at the beginning |
---|
| 961 | of a restart run (see <a href="chapter_3.3.html">chapter |
---|
[62] | 962 | 3.3</a>). The appropriate file must have been written by the |
---|
| 963 | preceding |
---|
[5] | 964 | job of the job chain (see <a href="#PARTICLE_RESTART_DATA_OUT">PARTICLE_RESTART_DATA_OUT</a>). |
---|
| 965 | This file is needed if particle transport is switched on (see the <a href="chapter_4.2.html#particles_package">particles |
---|
| 966 | package</a>) and contains all particle informations (particle |
---|
| 967 | positions, velocities, etc.) from the end of the preceding run. |
---|
| 968 | Concerning runs on |
---|
| 969 | several processors it has to be noted that each processing element |
---|
| 970 | reads its own file and that the file content is processor-dependent. |
---|
| 971 | The |
---|
| 972 | number of processors which can be used must not be changed during a job |
---|
[62] | 973 | chain and/or if a job chain is continued. <br> <br> |
---|
[5] | 974 | The first record of this file contains a version number (four character |
---|
[62] | 975 | string) of the subroutine, which output the data that follows (<span style="font-family: monospace;">write_particles</span>, |
---|
| 976 | see end of |
---|
[5] | 977 | file <span style="font-family: monospace;">advec_particles.f90</span>). |
---|
| 978 | This number has to |
---|
| 979 | agree with the version number of the subroutine which is reading the |
---|
| 980 | file |
---|
[62] | 981 | (<span style="font-family: monospace;">init_parrticles.f90</span>) |
---|
| 982 | in |
---|
[5] | 983 | case of a restart run. Otherwise the model run |
---|
| 984 | is aborted. Version numbers are changed whenever new code revisions |
---|
| 985 | require a change of the file format. Some general informations like the |
---|
| 986 | number of particles stored in the file, the number of particle groups, |
---|
| 987 | etc.. are stored in the second record. The third record includes the |
---|
| 988 | particles to be released at the source and the fourth record contains |
---|
| 989 | all current particles. In case that particle tails are used (see <a href="chapter_4.2.html#maximum_number_of_tailpoints">maximum_number_of_tailpoints</a>), |
---|
| 990 | a further record may follow, which contains the particle tail |
---|
| 991 | informations. A FORTRAN TYPE structure is used for storing the particle |
---|
| 992 | attributes. For detailed informations about the file format see the |
---|
[62] | 993 | corresponding READ statements in file <span style="font-family: monospace;">init_particles.f90</span> |
---|
| 994 | .<br> </td> </tr> <tr> <td style="vertical-align: top; text-align: center;">90<br> |
---|
| 995 | </td> <td style="vertical-align: top;"><a name="PARTICLE_RESTART_DATA_IN"></a>PARTICLE_RESTART_<br> |
---|
| 996 | DATA_OUT/</td> <td style="vertical-align: top;">O<br> |
---|
| 997 | </td> <td style="vertical-align: top;">Binary<br> |
---|
| 998 | </td> <td style="vertical-align: top;">Binary |
---|
[5] | 999 | data, which are output at the end of the |
---|
| 1000 | run and possibly needed by restart runs (see <a href="chapter_3.3.html">chapter |
---|
| 1001 | 3.3</a>) for the initialization. This output file is then read as |
---|
| 1002 | file <a href="#PARTICLE_RESTART_DATA_IN">PARTICLE_RESTART_DATA_IN</a>. |
---|
| 1003 | The file is only written if particle transport is switched on (see the <a href="chapter_4.2.html#particles_package">particles |
---|
[62] | 1004 | package</a>). For a more detailed description of the file |
---|
| 1005 | structure see <a href="#PARTICLE_RESTART_DATA_IN">PARTICLE_RESTART_DATA_IN</a>.</td> |
---|
| 1006 | </tr> <tr> <td style="vertical-align: top; text-align: center;">90<br> |
---|
| 1007 | </td> <td style="vertical-align: top;"> <p><a name="PLOT1D_PAR"></a>PLOT1D_PAR </p> |
---|
| 1008 | <p>and/or <br> |
---|
| 1009 | possibly </p> <p>PLOT1D_PAR_0 <br> |
---|
[5] | 1010 | PLOT1D_PAR_1 <br> |
---|
| 1011 | |
---|
| 1012 | . <br> |
---|
| 1013 | |
---|
| 1014 | . <br> |
---|
| 1015 | |
---|
| 1016 | . <br> |
---|
[62] | 1017 | PLOT1D_PAR_9</p> </td> <td style="vertical-align: top;">O<br> |
---|
| 1018 | </td> <td style="vertical-align: top;">Ascii/ |
---|
| 1019 | NAMELIST<br> </td> <td style="vertical-align: top;"> |
---|
| 1020 | <p>NAMELIST parameter set, with which the layout of a plot |
---|
[5] | 1021 | of the data in the local file <a href="#PLOT1D_DATA">PLOT1D_DATA</a> |
---|
| 1022 | can be steered, if these data are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/profil_beschreibung.html">profil</a>. |
---|
[62] | 1023 | </p> <p>This file contains the so-called RAHMEN (frame)- |
---|
| 1024 | and |
---|
| 1025 | CROSS-parameter sets (NAMELIST- group names <span style="font-style: normal;">&RAHMEN and/or |
---|
| 1026 | &CROSS</span>) |
---|
[5] | 1027 | needed by <span style="font-weight: bold;">profil</span>. |
---|
| 1028 | These parameter sets (and thus all details of the plot layout) can be |
---|
| 1029 | edited after the model run by the user. By default, all profiles of one |
---|
| 1030 | variable saved at different times are drawn into one panel. Different |
---|
| 1031 | colors are used for each output time. Which profiles are drawn |
---|
| 1032 | into which plane and how these planes are arranged on the |
---|
[62] | 1033 | plot, is determined with the parameters <a href="chapter_4.2.html#cross_profiles">cross_profiles</a>, |
---|
| 1034 | <a href="chapter_4.2.html#profile_columns">profile_columns</a> |
---|
| 1035 | and <a href="chapter_4.2.html#profile_rows">profile_rows</a>. |
---|
| 1036 | </p> <p>The file PLOT1D_PAR is created by the model |
---|
| 1037 | briefly before |
---|
[5] | 1038 | the end of a run. If a model run crashes uncontrolled (run time |
---|
| 1039 | errors or CPU - time exceeded), this file is usually missing, although |
---|
[62] | 1040 | profile data were saved to the file PLOT1D_DATA. </p> <p>If |
---|
| 1041 | the model has to create profiles for different subdomains |
---|
[5] | 1042 | (see <a href="chapter_4.1.html#statistic_regions">statistic_regions</a>), |
---|
| 1043 | further files are created, whereby the file name includes the number of |
---|
| 1044 | the respective subdomain (e.g. PLOT1D_PAR_1). In this case the name of |
---|
| 1045 | the file with NAMELIST parameters of the total domain is |
---|
[62] | 1046 | PLOT1D_PAR_0. </p> <p>For presentation in the |
---|
| 1047 | same plot, profile data of the restart |
---|
[5] | 1048 | runs can be appended to existing data of preceding runs of a job chain. |
---|
| 1049 | One can do this with the file attribute <a href="http://www.muk.uni-hannover.de/institut/software/mrun_beschreibung.html#tra">tra</a> |
---|
| 1050 | in the file connection statement for PLOT1D_DATA. The model produces |
---|
| 1051 | a parameter file PLOT1D_PAR for these combined data, if the run |
---|
| 1052 | parameter is set <a href="chapter_4.2.html#use_prior_plot1d_parameters">use_prior_plot1d_parameters</a> |
---|
[62] | 1053 | = <i>.T</i>. If this is omitted, then the parameter file |
---|
| 1054 | gives |
---|
[5] | 1055 | wrong plots (i.e. <span style="font-family: monospace;">use_prior_plot1d_parameters |
---|
| 1056 | = .T.</span> and "<span style="font-family: monospace;">tra</span>" |
---|
[62] | 1057 | must be specified together)!</p> </td> </tr> <tr> |
---|
| 1058 | <td style="vertical-align: top; text-align: center;">90<br> |
---|
| 1059 | </td> <td style="vertical-align: top;"><a name="PLOT2D_XY_GLOBAL"></a>PLOT2D_XY_GLOBAL</td> |
---|
| 1060 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ <br> |
---|
| 1061 | NAMELIST</td> <td style="vertical-align: top;"> <p>NAMELIST |
---|
| 1062 | parameter set, with which the plot layout |
---|
[5] | 1063 | of the data in local file <a href="#PLOT2D_XY">PLOT2D_XY</a> |
---|
| 1064 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">iso2d</a>. |
---|
| 1065 | This file contains the so-called global parameter set (NAMELIST - group |
---|
| 1066 | name: &GLOBAL) needed by <span style="font-weight: bold;">iso2d</span>. |
---|
| 1067 | This parameter set can be edited |
---|
| 1068 | after the model run by the user. By default, the arrays are drawn using |
---|
| 1069 | isolines and each array |
---|
| 1070 | will be drawn onto a separate page (thus no color shading |
---|
| 1071 | presentation, no vector arrows, streamlines etc.). </p> |
---|
[62] | 1072 | <p>Additionally <span style="font-weight: bold;">iso2d</span> |
---|
[5] | 1073 | needs the so-called local parameter |
---|
| 1074 | sets. These are saved by the model to the local file <a href="#PLOT2D_XY_LOCAL">PLOT2D_XY_LOCAL</a>. |
---|
| 1075 | Due to the fact that <span style="font-weight: bold;">iso2d</span> |
---|
| 1076 | expects global and local parameter sets on one and the same |
---|
| 1077 | file, in fact the global parameter set first, the user has to append |
---|
| 1078 | the contents of the file PLOT2D_XY_LOCAL to the file PLOT2D_XY_GLOBAL |
---|
[62] | 1079 | before call of <span style="font-weight: bold;">iso2d</span> |
---|
| 1080 | (e.g. by |
---|
[5] | 1081 | an OUTPUT - command in the MRUN - |
---|
[62] | 1082 | configuration file: “cat PLOT2D_XY_LOCAL >> |
---|
| 1083 | PLOT2D_XY_GLOBAL”). |
---|
[5] | 1084 | This |
---|
| 1085 | relatively pedantic proceedure is due to the fact that the model can |
---|
| 1086 | create the file PLOT2D_XY_GLOBAL only at the end of the simulation |
---|
| 1087 | (only then, when the final value of the global <span style="font-weight: bold;">iso2d</span>-parameter <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html#PLANZ">planz</a> |
---|
| 1088 | is known), while the local parameter sets are written continuously |
---|
| 1089 | to the file PLOT2D_XY_LOCAL during the run. Since the file |
---|
| 1090 | PLOT2D_XY_GLOBAL needs to be addressed only briefly once, output-unit |
---|
[62] | 1091 | 90 is used, which is also used for other files.</p> </td> </tr> |
---|
| 1092 | <tr> <td style="vertical-align: top; text-align: center;">90<br> |
---|
| 1093 | </td> <td style="vertical-align: top;"><a name="PLOT2D_XZ_GLOBAL"></a>PLOT2D_XZ_GLOBAL</td> |
---|
| 1094 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ <br> |
---|
| 1095 | NAMELIST</td> <td style="vertical-align: top;"> <p>NAMELIST |
---|
| 1096 | parameter set, with which the plot layout of the data |
---|
[5] | 1097 | in the local file <a href="#PLOT2D_XZ">PLOT2D_XZ</a> |
---|
| 1098 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">iso2d</a>. |
---|
[62] | 1099 | </p> <p>The description of the local file <a href="#PLOT2D_XY_GLOBAL">PLOT2D_XY_GLOBAL</a> |
---|
| 1100 | applies to this file, respectively.</p> </td> </tr> |
---|
| 1101 | <tr> <td style="vertical-align: top; text-align: center;">90<br> |
---|
| 1102 | </td> <td style="vertical-align: top;"><a name="PLOT2D_YZ_GLOBAL"></a>PLOT2D_YZ_GLOBAL</td> |
---|
| 1103 | <td style="vertical-align: top;">O<br> </td> <td style="vertical-align: top;">Ascii/ <br> |
---|
| 1104 | NAMELIST</td> <td style="vertical-align: top;"> <p>NAMELIST |
---|
| 1105 | parameter set, with which the plot layout of the data |
---|
[5] | 1106 | in the local file <a href="#PLOT2D_YZ">PLOT2D_YZ</a> |
---|
| 1107 | can be steered, if they are visualized with the plot program <a href="http://www.muk.uni-hannover.de/institut/software/iso2d_beschreibung.html">iso2d</a>. |
---|
[62] | 1108 | </p> <p>The description of the local file <a href="#PLOT2D_XY_GLOBAL">PLOT2D_XY_GLOBAL</a> |
---|
| 1109 | applies to this file, respectively.</p> </td> </tr> |
---|
| 1110 | <tr> <td style="vertical-align: top; text-align: center;">90</td> |
---|
| 1111 | <td style="vertical-align: top;"><a name="TOPOGRAPHY_DATA"></a>TOPOGRAPHY_DATA</td> <td style="vertical-align: top;">I</td> <td style="vertical-align: top;">Ascii</td> <td>Two-dimensional <font color="#000000">topography height information</font> |
---|
| 1112 | in m.<br> |
---|
| 1113 | In case of <a href="chapter_4.1.html#topography">topography</a> |
---|
| 1114 | = <span style="font-style: italic;">'read_from_file'</span> |
---|
| 1115 | the subroutine <span style="font-family: Cumberland AMT;">init_grid</span> reads |
---|
| 1116 | the topography height information in m for each grid point in |
---|
[5] | 1117 | a free floating point format. The data on file are laid out naturally, |
---|
| 1118 | i.e. in W-E orientation horizontally and in S-N orientation vertically, |
---|
[62] | 1119 | they must thus be organized as follows:<br> <ul> <li>each |
---|
| 1120 | line contains height information in m from <span style="font-style: italic;">i = 0, ..., nx</span>,</li> |
---|
| 1121 | <li>the top line contains height information in m for <span style="font-style: italic;">j = ny</span> (North), the |
---|
| 1122 | bottom line for <span style="font-style: italic;">j = 0</span> |
---|
| 1123 | (South),</li> <li>individual data must be separated by at |
---|
| 1124 | least one blank.</li> </ul> |
---|
| 1125 | Layout sketch:<br> <span style="font-family: Cumberland AMT;"> |
---|
| 1126 | |
---|
| 1127 | N<br> |
---|
| 1128 | (0,ny) </span><font color="#000000"><span style="font-family: Cumberland AMT;">(1,ny) |
---|
| 1129 | </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(2,ny) |
---|
| 1130 | ... </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(nx,ny) |
---|
| 1131 | <span style="font-family: Times New Roman,Times,serif;"></span></span></font><font color="#000000"> top of file</font><font color="#000000"><span style="font-family: Cumberland AMT;"><span style="font-family: Times New Roman,Times,serif;"></span></span></font><br> |
---|
| 1132 | <font color="#000000"><font color="#000000"><span style="font-family: Cumberland AMT;"> |
---|
| 1133 | (0,ny-1) </span><font color="#000000"><span style="font-family: Cumberland AMT;">(1,ny-1) </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(2,ny-1) |
---|
| 1134 | ... </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(nx,ny-1) <br> |
---|
| 1135 | </span></font></font><font color="#000000"><span style="font-family: Cumberland AMT;"></span></font></font><font color="#000000"><font color="#000000"><span style="font-family: Cumberland AMT;">W |
---|
| 1136 | (0,ny-2) </span><font color="#000000"><span style="font-family: Cumberland AMT;">(1,ny-2) </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(2,ny-2) |
---|
| 1137 | ... </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(nx,ny-2) E<br> |
---|
| 1138 | </span></font></font></font><font color="#000000"><font color="#000000"><span style="font-family: Cumberland AMT;"> |
---|
| 1139 | |
---|
| 1140 | :<br> |
---|
| 1141 | |
---|
| 1142 | |
---|
| 1143 | :<br> </span></font></font><font color="#000000"><font color="#000000"><span style="font-family: Cumberland AMT;"> |
---|
| 1144 | (0,0) </span><font color="#000000"><span style="font-family: Cumberland AMT;">(1,0) |
---|
| 1145 | </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(2,0) |
---|
| 1146 | ... </span></font><font color="#000000"><span style="font-family: Cumberland AMT;">(nx,0) |
---|
| 1147 | </span></font></font></font><font color="#000000"> bottom of file</font><br> |
---|
| 1148 | <font color="#000000"><span style="font-family: Cumberland AMT;"> |
---|
| 1149 | |
---|
| 1150 | S</span></font><br> |
---|
| 1151 | <span style="font-family: Arial;"></span><br> |
---|
[5] | 1152 | These data must exactly match the horizontal grid.<br> |
---|
[62] | 1153 | Alternatively, the user may add code to the user interface subroutine <a href="chapter_3.5.1.html#user_init_grid">user_init_grid</a> |
---|
| 1154 | to allow different data formats.</td> <td><br> </td> |
---|
| 1155 | </tr> <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">101</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_2D_XY_NETCDF"></a>DATA_2D_XY_NETCDF</font></td> |
---|
| 1156 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1157 | <td style="vertical-align: top;"><font color="#000000">Binary/<br> |
---|
[5] | 1158 | NetCDF-<br> |
---|
[62] | 1159 | format</font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000">This file |
---|
| 1160 | contains data of the two-dimensional horizontal |
---|
[5] | 1161 | cross sections (see <a href="../app/chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1162 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1163 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1164 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></td> |
---|
[62] | 1165 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1166 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">102</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_2D_XZ_NETCDF"></a>DATA_2D_XZ_NETCDF</font></td> |
---|
| 1167 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1168 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1169 | NetCDF-<br> |
---|
[62] | 1170 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1171 | contains data of the two-dimensional vertical (xz) |
---|
[5] | 1172 | cross sections (see <a href="../app/chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1173 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1174 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1175 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1176 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1177 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">103</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_2D_YZ_NETCDF"></a>DATA_2D_YZ_NETCDF</font></td> |
---|
| 1178 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1179 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1180 | NetCDF-<br> |
---|
[62] | 1181 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1182 | contains data of the two-dimensional vertical |
---|
[5] | 1183 | (yz) cross sections (see <a href="../app/chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1184 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1185 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1186 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1187 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1188 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">104</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_1D_PR_NETCDF"></a>DATA_1D_PR_NETCDF</font></td> |
---|
| 1189 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1190 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1191 | NetCDF-<br> |
---|
[62] | 1192 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1193 | contains data of the horizontally averaged vertical profiles (see <a href="../app/chapter_4.2.html#data_output_pr">data_output_pr</a>) |
---|
| 1194 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1195 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1196 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1197 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1198 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">105</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_1D_TS_NETCDF"></a>DATA_1D_TS_NETCDF</font></td> |
---|
| 1199 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1200 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1201 | NetCDF-<br> |
---|
[62] | 1202 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1203 | contains data of the timeseries (see <a href="chapter_4.2.html#dt_dots">dt_dots</a>) |
---|
| 1204 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1205 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1206 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1207 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1208 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">106</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_3D_NETCDF"></a>DATA_3D_NETCDF</font></td> |
---|
| 1209 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1210 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1211 | NetCDF-<br> |
---|
[62] | 1212 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1213 | contains data of the 3d-volume data (see <a href="../app/chapter_4.2.html#data_output">data_output</a>) |
---|
| 1214 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1215 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1216 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1217 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1218 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">107</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_1D_SP_NETCDF"></a>DATA_1D_SP_NETCDF</font></td> |
---|
| 1219 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1220 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1221 | NetCDF-<br> |
---|
[62] | 1222 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1223 | contains data of the horizontal spectra (see <a href="../app/chapter_4.2.html#data_output_sp">data_output_sp</a>) |
---|
| 1224 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1225 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1226 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1227 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1228 | <tr> <td style="vertical-align: top; text-align: center;"><font color="#000000">108</font></td> <td style="vertical-align: top;"><font color="#000000"><a name="DATA_PRT_NETCDF"></a>DATA_PRT_NETCDF/</font></td> |
---|
| 1229 | <td style="vertical-align: top;"><font color="#000000">I/O</font></td> |
---|
| 1230 | <td style="vertical-align: top;"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1231 | NetCDF-<br> |
---|
[62] | 1232 | format</font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1233 | contains particle data (see <a href="../app/chapter_4.2.html#dt_prel">dt_prel</a>) |
---|
| 1234 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1235 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1236 | More detailed informations about the PALM-NetCDF-output are given in <a href="../app/chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1237 | <td style="vertical-align: top;"><br> </td> </tr> |
---|
| 1238 | <tr> <td style="vertical-align: top; text-align: center;">109</td> |
---|
| 1239 | <td align="left" valign="top"><a name="DATA_1D_PTS_NETCDF"></a>DATA_1D_PTS_NETCDF</td> |
---|
| 1240 | <td align="left" valign="top">I/O</td> <td align="left" valign="top">Binary/<br> |
---|
[5] | 1241 | NetCDF-<br> |
---|
[62] | 1242 | format</td> <td align="left" valign="top">This |
---|
| 1243 | file contains data of the timeseries of particle quantities (<font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">see <a href="chapter_4.2.html#dt_prel">dt_prel</a>) |
---|
| 1244 | in NetCDF format. </font></font></font></font><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">The data |
---|
| 1245 | in this file can be visualized by any graphic software which provides a |
---|
| 1246 | NetCDF interface (e.g. <span style="font-weight: bold;">NCL |
---|
| 1247 | </span>or<span style="font-weight: bold;"> ferret</span>). |
---|
| 1248 | For a list of available output quantities see </font></font></font></font><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000"> <a href="chapter_4.2.html#dt_dopts">dt_dopts</a>.</font></font></font></font></font><br> |
---|
| 1249 | <font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000"><br> |
---|
| 1250 | </font></font></font></font><span lang="en-GB"><font face="Thorndale">In case of |
---|
| 1251 | using more than one particle group (see <a href="chapter_4.2.html#number_of_particle_groups">number_of_particle_groups</a>), |
---|
[5] | 1252 | seperate time series are output for each of the groups. The long names |
---|
| 1253 | of the variables in the NetCDF file containing the respective |
---|
[62] | 1254 | timeseries all end with the string</font><span style="font-style: italic; font-family: monospace;">' PG ##'</span><font face="Thorndale">, where ## is the number of the particle |
---|
| 1255 | group (<span style="font-style: italic;">01</span>, <span style="font-style: italic;">02</span>, etc.). <br> |
---|
| 1256 | <br> </font></span><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">More detailed informations about the |
---|
| 1257 | PALM-NetCDF-output are given in <a href="chapter_4.5.1.html">chapter |
---|
| 1258 | 4.5.1</a>.</font></font></font></font></td> |
---|
| 1259 | <td align="left" valign="top"></td> </tr> |
---|
| 1260 | <tr> <td style="text-align: center; vertical-align: top;">111</td> |
---|
| 1261 | <td style="vertical-align: top;"><a name="DATA_2D_XY_AV_NETCDF"></a>DATA_2D_XY_AV_NETCDF</td> |
---|
| 1262 | <td style="vertical-align: top;">I/O</td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1263 | NetCDF-<br> |
---|
[62] | 1264 | format</font></font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">This file |
---|
| 1265 | contains data of the temporally averaged two-dimensional horizontal |
---|
[5] | 1266 | cross sections (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1267 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1268 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1269 | More detailed informations about the PALM-NetCDF-output are given in <a href="chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></td> |
---|
[62] | 1270 | <td></td> </tr> <tr> <td style="text-align: center; vertical-align: top;">112</td> |
---|
| 1271 | <td style="vertical-align: top;"><a name="DATA_2D_XZ_AV_NETCDF"></a>DATA_2D_XZ_AV_NETCDF</td> |
---|
| 1272 | <td style="vertical-align: top;">I/O</td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1273 | NetCDF-<br> |
---|
[62] | 1274 | format</font></font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">This file contains data of the temporally |
---|
| 1275 | averaged two-dimensional vertical (xz) |
---|
[5] | 1276 | cross sections (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1277 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1278 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1279 | More detailed informations about the PALM-NetCDF-output are given in <a href="chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></font></td> |
---|
[62] | 1280 | <td></td> </tr> <tr> <td style="text-align: center; vertical-align: top;">113</td> |
---|
| 1281 | <td style="vertical-align: top;"><font color="#000000"><a name="DATA_2D_YZ_AV_NETCDF"></a>DATA_2D_YZ_AV_NETCDF</font></td> |
---|
| 1282 | <td style="vertical-align: top;">I/O</td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1283 | NetCDF-<br> |
---|
[62] | 1284 | format</font></font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">This file contains data of the temporally |
---|
| 1285 | averaged two-dimensional vertical |
---|
[5] | 1286 | (yz) cross sections (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
[62] | 1287 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1288 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1289 | More detailed informations about the PALM-NetCDF-output are given in <a href="chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></font></td> |
---|
[62] | 1290 | <td></td> </tr> <tr> <td style="text-align: center; vertical-align: top;">116</td> |
---|
| 1291 | <td style="vertical-align: top;"><font color="#000000"><a name="DATA_3D_AV_NETCDF"></a>DATA_3D_AV_NETCDF</font></td> |
---|
| 1292 | <td style="vertical-align: top;">I/O</td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000">Binary/<br> |
---|
[5] | 1293 | NetCDF-<br> |
---|
[62] | 1294 | format</font></font></font></td> <td style="vertical-align: top;"><font color="#000000"><font color="#000000"><font color="#000000"><font color="#000000">This file contains data of the temporally |
---|
| 1295 | averaged 3d-volume data (see <a href="chapter_4.2.html#data_output">data_output</a>) |
---|
| 1296 | in NetCDF format. The data in this file can be visualized by any |
---|
| 1297 | graphic software which provides a NetCDF interface (e.g. <span style="font-weight: bold;">NCL </span>or<span style="font-weight: bold;"> ferret</span>).<br> <br> |
---|
[5] | 1298 | More detailed informations about the PALM-NetCDF-output are given in <a href="chapter_4.5.1.html">chapter 4.5.1</a>.</font></font></font></font></td> |
---|
[62] | 1299 | <td></td> </tr> </tbody> |
---|
| 1300 | </table><font color="#000000"><br> |
---|
| 1301 | </font><br> |
---|
| 1302 | <font color="#000080"><font color="#000080"><a href="chapter_3.3.html"><font color="#000080"><img src="left.gif" name="Grafik1" align="bottom" border="2" height="32" width="32"></font></a><a href="index.html"><font color="#000080"><img src="up.gif" name="Grafik2" align="bottom" border="2" height="32" width="32"></font></a><a href="chapter_3.5.html"><font color="#000080"><img src="right.gif" name="Grafik3" align="bottom" border="2" height="32" width="32"></font></a></font></font><br> |
---|
[5] | 1303 | <br> |
---|
| 1304 | |
---|
[62] | 1305 | <span style="font-style: italic;">Last change:</span> |
---|
| 1306 | $Id: chapter_3.4.html 62 2007-03-13 02:52:40Z raasch $<br> |
---|
| 1307 | </font><br></body></html> |
---|