Changes between Version 11 and Version 12 of doc/app/machine/hlrnIII

Timestamp:

Jul 9, 2015 10:20:38 AM (10 years ago)

Author:

suehring

Comment:

--

doc/app/machine/hlrnIII

@@ -120 +120 @@
       %modules      ddt:fftw: ...  lccrayb parallel debug
 }}}
+      The program should compiled with option -g (this case ALLINEA is able to show the exact line where the error occur) as well as with option -O0 (to disable that the code might be reordered in surprising ways).
 
    2. Copy {{{.mrun.config}}} into directory {{{~/palm/current_version}}} on hlogin/blogin. Also copy parameter-file and other files required for the run to the respective subdirectories under {{{~/palm/current_version}}} (e.g. {{{JOBS/USERCODE...}}}).
@@ -128 +129 @@
                   # starts a so-called interactive job
       module load ddt
+      module load fftw
+      module load cray-hdf5-parallel
+      module load cray-netcdf-hdf5parallel
 
       mrun -d ....
@@ -136 +140 @@
    After short time, the '''allinea'''-window should open (if mpp1testq is filled with other jobs, you may have to wait for a longer time, alternatively you can also try to run on mpp2testq).
 
-   4. Within the '''allinea'''-window go to ''Application'' and select ''a.out'' (located within the current working-directory).   
+   4. Within the '''allinea'''-window go to ''Application'' and select ''a.out'' (located within the current working-directory).  
 
-   5. Now you can "RUN" '''allinea'''. Enjoy debugging.  
+   5. Please remove the checkmark at 'Submit to Queue' since you run an interactive job. 
 
-   6. After closing the '''allinea''' session, don't forget to leave the interactive job with "{{{exit}}}" command. If you did not use the entire requested {{{walltime}}} for debugging, you should cancel your interactive session on the computing nodes by the "{{{canceljob}}}"-command.  
+   6. Now you can "RUN" '''allinea'''. Enjoy debugging.  
+
+   7. After closing the '''allinea''' session, don't forget to leave the interactive job with "{{{exit}}}" command. If you did not use the entire requested {{{walltime}}} for debugging, you should cancel your interactive session on the computing nodes by the "{{{canceljob}}}"-command.  
 
 The HLRNIII provides a brief online documentation for '''alinea''' (see https://www.hlrn.de/home/view/System3/AllineaDDT for details).