== PALM source code change log ==

'''Current revision:'''  [[CRev]] [[BR]]
'''Current fixed release:''' 6.0 (r3477)

The following table documents all changes to the PALM repository since 2019. 

'''Previous changes:'''
* Changes [wiki:/doc/tec/changelog_2018 2018]
* Changes [wiki:/doc/tec/changelog_2017 2017] 
* Changes [wiki:/doc/tec/changelog_2013-2016 2013-2016] 
* Changes [wiki:/doc/tec/changelog_2009-2012 2009-2012].
* Changes [http://www.muk.uni-hannover.de/~raasch/PALM_group/doc/tec/tec_doc_1998-2008.html 1998-2008]

Please follow the [wiki:/doc/tec/developerrules rules for developers] when carrying out source code changes!

Entries in the fifth column specify the type of the change: change of existing code ('''C'''), new code ('''N''') or bugfix ('''B'''). More detailed information about the changes may sometimes be found in the header comment lines of the respectively changed routines. 

||='''svn\\Revision'''  =||='''Date'''\\(YYYY/MM/DD) =||='''Author'''  =||='''PALM\\version'''  =||='''Type''' =||='''Description''' =||
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6.0
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B, C
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SVN commit message: [[CRev(3,3942)]]
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6.0
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C, N
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SVN commit message: [[CRev(3,3941)]] (land_surface_model_mod, netcdf_data_input_mod)
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6.0
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SVN commit message: [[CRev(3,3937)]] (init_3d_model, nesting_offl_mod, synthetic_turbulence_generator)
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6.0
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B
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SVN commit message: [[CRev(3,3936)]] (read_restart_data_mod, write_restart_data_mod)
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SVN commit message: [[CRev(3,3933)]] (average_3d_data, check_parameters, land_surface_model_mod, sum_up_3d_data, surface_mod, urban_surface_mod)

The main problem was that the output array pt_2m (output quantity theta_2m*) was not initialized causing crash at do2d_at_begin when spinup was disabled.
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6.0
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B
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SVN commit message: [[CRev(3,3932)]] (pmc_child_mod, pmc_general_mod, pmc_interface_mod)
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C
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6.0
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C
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SVN commit message: [[CRev(3,3927)]] (advec_s_pw, advec_s_up, doffusion_s)
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C
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SVN commit message: [[CRev(3,3918)]] (urban_surface_mod, case_config.yml)
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C
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SVN commit message: [[CRev(3,3900)]] (init_3d_model, radiation_model_mod, synthetic_turbulence_generator)
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SVN commit message: [[CRev(3,3897)]] (chemistry_model_mod, init_pegrid)
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SVN commit message: [[CRev(3,3888)]] (pmc_handle_communicator_mod, pmc_interface_mod)
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SVN commit message: [[CRev(3,3885)]] (biometeorology_mod, bulk_cloud_model_mod, check_parameters, chem_emissions_mod, chemistry_model_mod, cpulog_mod, data_output_2d,data_output_3d, indoor_model_mod, init_3d_model, init_pegrid, land_surface_model_mod, message, module_interface, odules, multi_agent_system_mod, nesting_offl_mod, netcdf_data_input_mod, palm, parin, plant_canopy_model_mod,pmc_handle_communicator_mod, pmc_interface_mod, prognostic_equations, radiation_model_mod, salsa_mod, surface_layer_fluxes_mod, synthetic_turbulence_generator_mod, time_integration, time_integration_spinup, urban_surface_mod, virtual_flight_mod, wind_turbine_model_mod)

'''Change:'''\\ Started clean-up and re-formatting of location and informative|warning|error messages that are written to the job log file (UNIT=6). Further clean-up is necessary, only relevant location_message(s) shall be printed to keep the job log as clear as possible for regular use (if simulation is successful). The previous formatting of the location_message(s) {{{---finished}}} made it partly impossible to identify the specific location, hence, the new formatting looks like this:
{{{
    -start----  creating virtual PE grids + MPI derived data types  | System time: 13:39:08
    -finished-  creating virtual PE grids + MPI derived data types  | System time: 13:39:08
      --- informative message ---  ID: PA0505   generated by routine: init_grid
         
          Terrain height was internally shifted downwards by    4.00000000000000      meter(s) to save computational resources.
         
          Further information can be found at
          http://palm.muk.uni-hannover.de/trac/wiki/doc/app/errmsg#PA0505
}}}
I have added a time stamp which is interesting for evaluating the required computing time of specific model parts already during the simulation. This might e.g. be useful if the simulation hangs at some point. The informative|warning|error messages are now indented with respect to start|finish location messages. Some of the informative|warning|error messages also require clean-up (especially in the new modules), as they hold information that actually belongs into the HEADER|RUN_CONTROL files.\\\\

'''New:'''\\
Instead of having too many location_message(s) in the job log which are only printed by core 0 (of the parent (root) domain in case of nesting), we now have the possibility to print additional debug_message(s) to the DEBUG_00* files (UNIT=9) of each processor core, simply by adding the parameter {{{debug_output = .T.}}} to the {{{runtime_parameters}}} namelist. This can be very helpful to narrow down the location of a model crash simply by setting this parameter instead of having to add WRITE statements and re-compile the code. Once the location is narrowed down, set {{{debug_output = .F.}}} and implement your own {{{CALL debug_message (....)}}}.
}}}
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SVN commit message: [[CRev(3,3780)]] (chemistry_model_mod, chem_modules, modifications in kpp4palm for altering chem_gasphase_mod)\\\\
Modifications in kpp4palm in order to create get_mechanismname (kpp4palm.ksh, module_header, create_kpp_module.C/.h) and removal of read from unit 10 in chemistry_model_mod.f90, adding call get_mechanismname instead to check for match whether mechanism name in namelist and chem_gasphase_mod.f90 are matching
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SVN commit message: [[CRev(3,3754)]] (radiation_model_mod)\\

'''Bugfixes:'''\\
(from branch resler)
* add further required MRT factors to read/write_svf,
* fix for aggregating view factors to eliminate local noise in reflected irradiance at mutually close surfaces (corners, presence of trees) in the angular discretization scheme.
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'''Bugfix:'''
The query {{{time_since_reference_point >= skip_time_*}}} had to be added to the IF clauses around calls to data_output_* routines, otherwise the chosen values for skip_time_* parameters don't come into affect in case namelist parameters dt_do* = 0.0 (see ticket:798).\\\\

'''Change:'''
Clean up indoor_model and biometeorology model calls.
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