# # ChangeLog for palm/trunk/UTIL/chemistry # # Generated by Trac 1.0.5 # Dec 21, 2024 2:21:45 PM Wed, 30 Jan 2019 14:20:32 GMT suehring [3709] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/phstat.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/phstat.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/salsagas.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/salsagas.spc (copied) Undo bad commit in chemistry preprocessor (accidantly deleted files). Wed, 30 Jan 2019 12:58:13 GMT hellstea [3708] * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/phstat.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/phstat.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/salsagas.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/salsagas.spc (deleted) Checks for parent / child grid line matching introduced Thu, 24 Jan 2019 18:13:00 GMT suehring [3698] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/cbm4.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/cbm4.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/passive1.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/passive1.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/salsa+simple.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/salsa+simple.spc (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.kpp (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.eqn (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.spc (copied) Fix bad commit in gasphase_preproc Thu, 24 Jan 2019 17:16:13 GMT hellstea [3697] * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/cbm4.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/cbm4.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/passive1.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/passive1.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/salsa+simple.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/salsa+simple.spc (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.eqn (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.spc (deleted) bugfix in child initialization in pmc_interface_mod Fri, 18 Jan 2019 15:06:05 GMT hellstea [3681] * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/inifor/tests/test-input-files.f90 (modified) Major update of pmc_interface_mod Thu, 20 Dec 2018 14:06:18 GMT forkel [3639] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/salsa+simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.eqn (modified) Bug fix of rate of eq.2 in simple.eqn and derived mechanisms, update ... Wed, 12 Dec 2018 10:52:55 GMT forkel [3623] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.kpp (modified) removed inlined declaration of qvap and fakt - was forgotten for CBM4 Fri, 07 Dec 2018 11:48:57 GMT forkel [3606] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.eqn (modified) bug fix for machanisms simple and simplep Fri, 30 Nov 2018 16:24:17 GMT forkel [3590] * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) A few updates and corrections in Readme file Fri, 30 Nov 2018 12:57:47 GMT forkel [3585] * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/lex.yy.c (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/y.tab.c (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/y.tab.h (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (modified) Comments in all chem_gasphase_mod.kpp, add def_salsagas/*.f90, ... Thu, 29 Nov 2018 19:16:36 GMT suehring [3582] * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) * palm/trunk/UTIL (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas (copied) Merge branch salsa with trunk Mon, 05 Nov 2018 07:18:02 GMT maronga [3487] * palm/trunk/SCRIPTS/palmrungui (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) processed comments from a previous revision, adjustments of ... Tue, 30 Oct 2018 14:51:23 GMT kanani [3458] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/Makefile (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/main.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_subroutines (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Reintegrated fixes/changes from branch chemistry Tue, 02 Oct 2018 12:21:11 GMT kanani [3298] * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (copied) * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (copied) * palm/trunk/SOURCE/chem_photolysis_mod.f90 (copied) * palm/trunk/SOURCE/chemistry_model_mod.f90 (copied) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/outflow_turbulence.f90 (copied) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/lex.yy.c (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/initialize_kpp_ctrl_template.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90.save (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Merge chemistry branch at r3297 to trunk Wed, 24 Jan 2018 15:38:29 GMT kanani [2768] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) Added parameter check, reduced line length, some formatting Tue, 02 Jan 2018 08:49:38 GMT maronga [2718] * palm/trunk/DOC (deleted) * palm/trunk/LIB/rrtmg/Makefile (modified) * palm/trunk/LIB/rrtmg/Makefile_static (modified) * palm/trunk/LIB/rrtmg/install_rrtmg (modified) * palm/trunk/SCRIPTS/batch_scp (modified) * palm/trunk/SCRIPTS/compile_tutorial (modified) * palm/trunk/SCRIPTS/document_changes (modified) * palm/trunk/SCRIPTS/generate_documentation (modified) * palm/trunk/SCRIPTS/img2stereo (deleted) * palm/trunk/SCRIPTS/img2video (deleted) * palm/trunk/SCRIPTS/imuk_wm_black.png (deleted) * palm/trunk/SCRIPTS/imuk_wm_white.png (deleted) * palm/trunk/SCRIPTS/palm2doxgen.config (copied) * 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palm/trunk/SOURCE/write_var_list.f90 (modified) * palm/trunk/UTIL/Makefile_utilities (modified) * palm/trunk/UTIL/analyze_particle_data.f90 (modified) * palm/trunk/UTIL/analyze_particle_netcdf_data.f90 (modified) * palm/trunk/UTIL/check_pegrid.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) * palm/trunk/UTIL/combine_plot_fields.f90 (modified) * palm/trunk/UTIL/combine_plot_fields_single_open.f90 (modified) * palm/trunk/UTIL/compare_palm_logs.f90 (modified) * palm/trunk/UTIL/find_palm_config.f90 (deleted) * palm/trunk/UTIL/inifor/Makefile (modified) * palm/trunk/UTIL/inifor/Makefile.gnu (modified) * palm/trunk/UTIL/inifor/Makefile.ifort (modified) * palm/trunk/UTIL/inifor/src/Makefile (modified) * palm/trunk/UTIL/inifor/src/control.f90 (modified) * 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palm/trunk/UTIL/interpret_config.f90 (modified) * palm/trunk/UTIL/read_palm_netcdf_data.f90 (modified) * palm/trunk/UTIL/read_prt_data.f90 (modified) deleting of deprecated files; headers updated where needed Fri, 15 Dec 2017 12:38:41 GMT kanani [2699] * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm (deleted) Adjustment of chemistry gasphase preprocessor Thu, 14 Dec 2017 17:12:51 GMT kanani [2696] * palm/trunk (modified) * palm/trunk/INSTALL/ex_lsm_clearsky_rc (modified) * palm/trunk/INSTALL/example_cbl_rc (modified) * palm/trunk/SCRIPTS/.mrun.config.csc_sisu (deleted) * palm/trunk/SCRIPTS/.mrun.config.cuhk (deleted) * palm/trunk/SCRIPTS/.mrun.config.dkrz (deleted) * palm/trunk/SCRIPTS/.mrun.config.forwind_eddy (deleted) * 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palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/exqssa.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/exqssa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/exqssa.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/kpp_rodas.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/kpp_rodas.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/kpp_ros4.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/kpp_ros4.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/qssa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/qssa.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/qssa1.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/qssafix.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/qssafix.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/rodas3.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/rodas3.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/rodas3.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/rodas3_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/rodas3_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros1.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros1.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros1_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros1_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2_cts_adj.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros2_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros3.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros3.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros3.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros3_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros3_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros4.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros4.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros4_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/ros4_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/twostepj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/oldies/twostepj.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/readme (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_adj.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_adj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_adj.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_soa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_soa.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_tlm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/rosenbrock_tlm.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta_adj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta_adj.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta_tlm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/runge_kutta_tlm.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_adj.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_adj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_adj.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_soa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_soa.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_tlm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/sdirk_tlm.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/tau_leap.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/tau_leap.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/user_contributed (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/user_contributed/readme (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/user_contributed/ros2_manual.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int.modified_WCOPY/user_contributed/ros2_manual.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/ChangeRecord.txt (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/NonstiffOptionsReadme.txt (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/StiffOptionsReadme.txt (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/a.out (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/dvode_f90_m.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/dvode_f90_m.mod (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/example1.dat (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/example1.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/example1.mod (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/example2.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/nonstiffoptions.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/quickstart.pdf (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/stiffoptions.dat (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/stiffoptions.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/stiffset.mod (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/DVODE/test.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_lsodes.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_lsodes.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_odessa_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_odessa_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_radau5.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/atm_radau5.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/gillespie.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/gillespie.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/gillespie.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_dvode.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_dvode.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_dvode.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_dvode.f90.save (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_lsode.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_lsode.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_odessa_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_odessa_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_radau5.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_radau5.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_sdirk4.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_sdirk4.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_sdirk4.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_seulex.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_seulex.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/kpp_seulex.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/none.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/none.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/none.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/none.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/none.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/exqssa.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/exqssa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/exqssa.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/kpp_rodas.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/kpp_rodas.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/kpp_ros4.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/kpp_ros4.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/qssa.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/qssa.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/qssa1.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/qssafix.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/qssafix.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/rodas3.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/rodas3.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/rodas3.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/rodas3_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/rodas3_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros1.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros1.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros1_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros1_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2_cts_adj.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros2_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros3.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros3.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros3.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros3_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros3_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros4.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros4.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros4_ddm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/ros4_ddm.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/twostepj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/oldies/twostepj.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/readme (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock_adj.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock_adj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock_adj.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock_tlm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/rosenbrock_tlm.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta_adj.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta_adj.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta_tlm.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/runge_kutta_tlm.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/int/sdirk.c (added) * 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(added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/strato.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/strato.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/strato.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/test_pentane.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/test_pentane.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/test_pentane.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/tropo.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/tropo.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/tropo.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/wet.def (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/wet.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/models/wet.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/readme (added) * 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palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Fun.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Fun.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Fun.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Hessian.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Hessian.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Hessian.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Jac_SP.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Jac_SP.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Mex_Jac_SP.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Template_Fun_Chem.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/Template_Jac_Chem.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/UpdateSun.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/UpdateSun.f (added) * 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palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dFun_dRcoeff.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dFun_dRcoeff.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dJac_dRcoeff.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dJac_dRcoeff.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dJac_dRcoeff.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/dJac_dRcoeff.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/mex.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/mex.f (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/ncar.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/ncar.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/sparsity_plots.m (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/sutil.c (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/util/sutil.f (added) * 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(added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/Makefile (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/TAGS (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/main.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.C (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.h (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/initialize_kpp_ctrl_template.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/messy_main_tools_kp4_compress.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90.save (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/UserRateLaws.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/passive.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/passive.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/smog.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/smog.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/Makefile_chem_gasphase_mod (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod.map (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Function.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Global.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Hessian.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_HessianSP.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Initialize.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Integrator.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Jacobian.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_JacobianSP.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_LinearAlgebra.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Model.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Monitor.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Parameters.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Precision.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Rates.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Stoichiom.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_StoichiomSP.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_Util.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_mex_Fun.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_mex_Hessian.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/chem_gasphase_mod_mex_Jac_SP.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/file_list (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/include_list (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/initialize_kpp_ctrl_template.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/interface_ignore_list (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/kk_kpp.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/module_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/passive.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/passive.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/tmp_kpp4palm/subroutine_list (added) * palm/trunk/UTIL/combine_plot_fields.f90 (modified) * palm/trunk/UTIL/combine_plot_fields_single_open.f90 (modified) * palm/trunk/UTIL/compare_palm_logs.f90 (modified) * palm/trunk/UTIL/find_palm_config.f90 (modified) * palm/trunk/UTIL/inifor (added) * palm/trunk/UTIL/inifor/Makefile (added) * palm/trunk/UTIL/inifor/Makefile.gnu (added) * palm/trunk/UTIL/inifor/Makefile.ifort (added) * palm/trunk/UTIL/inifor/README (added) * palm/trunk/UTIL/inifor/doc (added) * palm/trunk/UTIL/inifor/doc/doxygen.config (added) * palm/trunk/UTIL/inifor/namelist (added) * palm/trunk/UTIL/inifor/src (added) * palm/trunk/UTIL/inifor/src/Makefile (added) * palm/trunk/UTIL/inifor/src/control.f90 (added) * palm/trunk/UTIL/inifor/src/defs.f90 (added) * palm/trunk/UTIL/inifor/src/grid.f90 (added) * palm/trunk/UTIL/inifor/src/inifor.f90 (added) * palm/trunk/UTIL/inifor/src/io.f90 (added) * palm/trunk/UTIL/inifor/src/transform.f90 (added) * palm/trunk/UTIL/inifor/src/types.f90 (added) * palm/trunk/UTIL/inifor/src/util.f90 (added) * palm/trunk/UTIL/inifor/tests (added) * palm/trunk/UTIL/inifor/tests/Makefile (added) * palm/trunk/UTIL/inifor/tests/Makefile.gnu (added) * palm/trunk/UTIL/inifor/tests/Makefile.ifort (added) * palm/trunk/UTIL/inifor/tests/test-boundaries.f90 (added) * palm/trunk/UTIL/inifor/tests/test-centre-velocities.f90 (added) * palm/trunk/UTIL/inifor/tests/test-grid.f90 (added) * palm/trunk/UTIL/inifor/tests/test-input-files.f90 (added) * palm/trunk/UTIL/inifor/tests/test-interpolation.f90 (added) * palm/trunk/UTIL/inifor/tests/test-prototype.f90 (added) * palm/trunk/UTIL/inifor/tests/test-transform.f90 (added) * palm/trunk/UTIL/inifor/tests/util.f90 (added) * palm/trunk/UTIL/interpret_config.f90 (modified) * palm/trunk/UTIL/read_palm_netcdf_data.f90 (modified) * palm/trunk/UTIL/read_prt_data.f90 (modified) Merge of branch palm4u into trunk