# # ChangeLog for palm/trunk/SOURCE/chemistry_model_mod.f90 # # Generated by Trac 1.0.5 # Apr 27, 2024 5:38:07 AM Fri, 14 Jun 2019 14:04:35 GMT raasch [4029] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/surface_data_output_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) bugfix: decycling of chemistry species after nesting data transfer, ... Fri, 24 May 2019 11:32:38 GMT suehring [4004] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/virtual_flight_mod.f90 (modified) chemistry: perform basic checks only when anthropenic emissions are ... Mon, 13 May 2019 11:04:01 GMT suehring [3968] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) Updates from chemistriy branched merged into trunk: code cleaning and ... Wed, 24 Apr 2019 14:57:18 GMT forkel [3930] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) changed subroutine name from chem_non_transport_physics to ... Wed, 24 Apr 2019 12:52:08 GMT banzhafs [3929] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) Correct/complete module_interface introduction for chemistry model ... Mon, 15 Apr 2019 13:05:32 GMT suehring [3898] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) remove un-used variable Mon, 15 Apr 2019 11:51:14 GMT suehring [3897] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) 2D output of emission fluxes in chemistry; revise check for multigrid ... Fri, 12 Apr 2019 10:01:17 GMT schwenkel [3889] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) bugfix for commit 3887 Fri, 12 Apr 2019 08:47:41 GMT schwenkel [3887] * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) bugfix for chemistry_model_mod via introducing ... Thu, 11 Apr 2019 17:21:03 GMT suehring [3886] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) bugfixes: uninitialized variable in dry deposition; emission output Thu, 11 Apr 2019 11:29:34 GMT kanani [3885] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/cpulog_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/message.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/nesting_offl_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/pmc_handle_communicator_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/surface_layer_fluxes_mod.f90 (modified) * palm/trunk/SOURCE/synthetic_turbulence_generator_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/time_integration_spinup.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/virtual_flight_mod.f90 (modified) * palm/trunk/SOURCE/wind_turbine_model_mod.f90 (modified) restructure/add location/debug messages Mon, 08 Apr 2019 21:43:02 GMT knoop [3880] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) Moved chem_prognostic_equations into module_interface Mon, 08 Apr 2019 20:25:23 GMT knoop [3879] * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) Moved loop over chem_species into chem_boundary_conds_decycle Mon, 08 Apr 2019 19:35:54 GMT knoop [3878] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) Added chem_non_transport_physics module interface to ... Mon, 08 Apr 2019 19:09:16 GMT knoop [3877] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) Added chem_actions module interface to chemistry_model_mod and moved ... Mon, 08 Apr 2019 18:41:49 GMT knoop [3876] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chem_photolysis_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/nesting_offl_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (modified) Moved "photolysis_scheme", "chem_species" and "phot_frequen" to ... Thu, 04 Apr 2019 13:07:31 GMT banzhafs [3862] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) some formatting in deposition code of chemistry_model_mod Mon, 01 Apr 2019 15:25:48 GMT forkel [3848] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) some formatting Thu, 28 Mar 2019 15:04:04 GMT forkel [3833] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/surface_layer_fluxes_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/initialize_kpp_ctrl_template.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) removed USE chem_gasphase_mod from chem_modules, apply USE ... Wed, 27 Mar 2019 15:56:16 GMT pavelkrc [3824] * palm/trunk/SOURCE/chem_photolysis_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) Code review of radiation_model_mod.f90 Wed, 27 Mar 2019 13:05:00 GMT forkel [3821] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) fixed commas in lines 2215 abd 2232 Wed, 27 Mar 2019 11:53:41 GMT forkel [3820] * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/TESTS/cases/urban_environment/INPUT/urban_environment_p3d (modified) * palm/trunk/TESTS/cases/urban_environment_restart/INPUT/urban_environment_restart_p3dr (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) renaming of get_mechanismname, do_emiss and do_depo, sorting in ... Fri, 15 Mar 2019 11:15:38 GMT banzhafs [3796] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Unused variables removed/taken care of from/in chemistry_model_mod Tue, 05 Mar 2019 14:16:20 GMT forkel [3784] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) read from unit 10 now also removed from subroutine chem_header Tue, 05 Mar 2019 13:23:50 GMT forkel [3783] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Removed forgotten write statements an some of the unused variables Tue, 05 Mar 2019 11:19:45 GMT forkel [3780] * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) removed read from unit 10 in chemistry_model_mod.f90, added ... Wed, 27 Feb 2019 08:18:02 GMT raasch [3767] * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/gust_mod.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/ocean_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/user_module.f90 (modified) unused variables removed from rrd-subroutines parameter list Tue, 12 Feb 2019 17:00:45 GMT suehring [3738] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) clean-up debug prints Tue, 12 Feb 2019 16:57:06 GMT suehring [3737] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/nesting_offl_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) Enable initialization of chemistry variables via dynamic input file; ... Wed, 06 Feb 2019 13:10:18 GMT kanani [3719] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/disturb_heatflux.f90 (modified) * palm/trunk/SOURCE/large_scale_forcing_nudging_mod.f90 (modified) * palm/trunk/SOURCE/ocean_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/synthetic_turbulence_generator_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/time_integration_spinup.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) Correct and clean-up cpu_logs, some overlapping counts ... Sat, 26 Jan 2019 17:03:42 GMT knoop [3700] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/user_define_netcdf_grid.f90 (deleted) * palm/trunk/SOURCE/user_init_land_surface.f90 (modified) * palm/trunk/SOURCE/user_module.f90 (modified) Moved user_define_netdf_grid into user_module.f90 Added module ... Tue, 22 Jan 2019 10:42:06 GMT knoop [3687] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/user_3d_data_averaging.f90 (deleted) * palm/trunk/SOURCE/user_actions.f90 (deleted) * palm/trunk/SOURCE/user_additional_routines.f90 (deleted) * palm/trunk/SOURCE/user_check_data_output.f90 (deleted) * palm/trunk/SOURCE/user_check_data_output_pr.f90 (deleted) * palm/trunk/SOURCE/user_check_parameters.f90 (deleted) * palm/trunk/SOURCE/user_data_output_2d.f90 (deleted) * palm/trunk/SOURCE/user_data_output_3d.f90 (deleted) * palm/trunk/SOURCE/user_header.f90 (deleted) * palm/trunk/SOURCE/user_init.f90 (deleted) * palm/trunk/SOURCE/user_last_actions.f90 (deleted) * palm/trunk/SOURCE/user_module.f90 (modified) * palm/trunk/SOURCE/user_parin.f90 (deleted) * palm/trunk/SOURCE/user_read_restart_data_mod.f90 (deleted) * palm/trunk/SOURCE/user_statistics.f90 (deleted) * palm/trunk/SOURCE/user_write_restart_data_mod.f90 (deleted) * palm/trunk/SOURCE/wrd_write_string.f90 (modified) Moved all user routunes that are dependencies of the PALM core only, ... Mon, 21 Jan 2019 01:02:11 GMT knoop [3685] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/gust_mod.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/surface_layer_fluxes_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/wind_turbine_model_mod.f90 (modified) Some interface calls moved to module_interface + cleanup Wed, 09 Jan 2019 14:00:37 GMT forkel [3664] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Replaced misplaced location message by @todo Mon, 07 Jan 2019 16:31:57 GMT suehring [3654] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Disable misplaced location message in chemistry_model_mod Mon, 07 Jan 2019 15:29:59 GMT forkel [3652] * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Checks added for chemistry mechanism, parameter chem_mechanism added Fri, 28 Dec 2018 17:58:49 GMT kanani [3646] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/surface_output_mod.f90 (modified) * palm/trunk/SOURCE/synthetic_turbulence_generator_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) Bugfix: replace simulated_time by time_since_reference_point where ... Mon, 24 Dec 2018 13:16:19 GMT knoop [3643] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Bugfix: set found logical correct in chem_data_output_2d Thu, 20 Dec 2018 13:18:23 GMT forkel [3638] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chemistry_model_mod: Added missing conversion factor fr2ppm for qvap Thu, 20 Dec 2018 01:51:36 GMT knoop [3637] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (added) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) M Makefile Wed, 19 Dec 2018 13:48:34 GMT raasch [3636] * palm/trunk/SOURCE/advec_s_bc.f90 (modified) * palm/trunk/SOURCE/advec_s_pw.f90 (modified) * palm/trunk/SOURCE/advec_s_up.f90 (modified) * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/buoyancy.f90 (modified) * palm/trunk/SOURCE/calc_mean_profile.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/diffusion_s.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/ocean_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) nopointer option removed Fri, 07 Dec 2018 14:14:11 GMT banzhafs [3611] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chem_emissions_mod and chem_modules update to comply PALM coding rules Tue, 04 Dec 2018 13:49:07 GMT banzhafs [3600] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chemistry_model_mod code update to comply PALM coding rules Fri, 30 Nov 2018 13:20:29 GMT forkel [3586] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Changed character length of name in species_def and photols_def to 15 Tue, 27 Nov 2018 17:44:21 GMT kanani [3570] * palm/trunk/SCRIPTS/palmrun (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fix too long lines (chemistry_model_mod, chem_emissions_mod), correct ... Tue, 20 Nov 2018 17:06:15 GMT suehring [3543] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) changes from last commit documented Tue, 20 Nov 2018 17:04:13 GMT suehring [3542] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/lpm_exchange_horiz.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) Revise ghost point exchange in netcdf-data input; new routine for ... Wed, 14 Nov 2018 13:36:44 GMT raasch [3524] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/lpm_init.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/poismg_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) unused variables removed, missing working precision added, missing ... Tue, 30 Oct 2018 14:51:23 GMT kanani [3458] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/Makefile (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/main.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_subroutines (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Reintegrated fixes/changes from branch chemistry Mon, 29 Oct 2018 19:36:56 GMT suehring [3449] * palm/trunk/SOURCE/basic_constants_and_equations_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/TESTS/cases/urban_environment/MONITORING/urban_environment_rc (modified) * palm/trunk/TESTS/cases/urban_environment_restart/MONITORING/urban_environment_restart_rc (modified) Branch resler -r 3439 re-integrated into current trunk: RTM 3.0, ... Fri, 26 Oct 2018 18:25:44 GMT gronemeier [3435] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/user_data_output_mask.f90 (modified) new: terrain-following masked output; bugfixes: increase vertical ... Thu, 18 Oct 2018 15:25:56 GMT kanani [3373] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fix cpp directives and error messages Mon, 08 Oct 2018 11:43:01 GMT sward [3318] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fixed faulty syntax in message string Tue, 02 Oct 2018 12:21:11 GMT kanani [3298] * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (copied) * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (copied) * palm/trunk/SOURCE/chem_photolysis_mod.f90 (copied) * palm/trunk/SOURCE/chemistry_model_mod.f90 (copied) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/outflow_turbulence.f90 (copied) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/lex.yy.c (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/initialize_kpp_ctrl_template.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90.save (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Merge chemistry branch at r3297 to trunk