# # ChangeLog for palm/trunk/SOURCE/chemistry_model_mod.f90 # # Generated by Trac 1.0.5 # Apr 20, 2024 3:15:51 AM Mon, 07 Jan 2019 16:31:57 GMT suehring [3654] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Disable misplaced location message in chemistry_model_mod Mon, 07 Jan 2019 15:29:59 GMT forkel [3652] * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Checks added for chemistry mechanism, parameter chem_mechanism added Fri, 28 Dec 2018 17:58:49 GMT kanani [3646] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/surface_output_mod.f90 (modified) * palm/trunk/SOURCE/synthetic_turbulence_generator_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) Bugfix: replace simulated_time by time_since_reference_point where ... Mon, 24 Dec 2018 13:16:19 GMT knoop [3643] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Bugfix: set found logical correct in chem_data_output_2d Thu, 20 Dec 2018 13:18:23 GMT forkel [3638] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chemistry_model_mod: Added missing conversion factor fr2ppm for qvap Thu, 20 Dec 2018 01:51:36 GMT knoop [3637] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/module_interface.f90 (added) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) M Makefile Wed, 19 Dec 2018 13:48:34 GMT raasch [3636] * palm/trunk/SOURCE/advec_s_bc.f90 (modified) * palm/trunk/SOURCE/advec_s_pw.f90 (modified) * palm/trunk/SOURCE/advec_s_up.f90 (modified) * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/buoyancy.f90 (modified) * palm/trunk/SOURCE/calc_mean_profile.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/diffusion_s.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/ocean_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) nopointer option removed Fri, 07 Dec 2018 14:14:11 GMT banzhafs [3611] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chem_emissions_mod and chem_modules update to comply PALM coding rules Tue, 04 Dec 2018 13:49:07 GMT banzhafs [3600] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chemistry_model_mod code update to comply PALM coding rules Fri, 30 Nov 2018 13:20:29 GMT forkel [3586] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Changed character length of name in species_def and photols_def to 15 Tue, 27 Nov 2018 17:44:21 GMT kanani [3570] * palm/trunk/SCRIPTS/palmrun (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fix too long lines (chemistry_model_mod, chem_emissions_mod), correct ... Tue, 20 Nov 2018 17:06:15 GMT suehring [3543] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) changes from last commit documented Tue, 20 Nov 2018 17:04:13 GMT suehring [3542] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/lpm_exchange_horiz.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) Revise ghost point exchange in netcdf-data input; new routine for ... Wed, 14 Nov 2018 13:36:44 GMT raasch [3524] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/lpm_init.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/poismg_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) unused variables removed, missing working precision added, missing ... Tue, 30 Oct 2018 14:51:23 GMT kanani [3458] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/Makefile (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/main.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_subroutines (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Reintegrated fixes/changes from branch chemistry Mon, 29 Oct 2018 19:36:56 GMT suehring [3449] * palm/trunk/SOURCE/basic_constants_and_equations_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/TESTS/cases/urban_environment/MONITORING/urban_environment_rc (modified) * palm/trunk/TESTS/cases/urban_environment_restart/MONITORING/urban_environment_restart_rc (modified) Branch resler -r 3439 re-integrated into current trunk: RTM 3.0, ... Fri, 26 Oct 2018 18:25:44 GMT gronemeier [3435] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/SOURCE/user_data_output_mask.f90 (modified) new: terrain-following masked output; bugfixes: increase vertical ... Thu, 18 Oct 2018 15:25:56 GMT kanani [3373] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fix cpp directives and error messages Mon, 08 Oct 2018 11:43:01 GMT sward [3318] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fixed faulty syntax in message string Tue, 02 Oct 2018 12:21:11 GMT kanani [3298] * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (copied) * palm/trunk/SOURCE/chem_gasphase_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (copied) * palm/trunk/SOURCE/chem_photolysis_mod.f90 (copied) * palm/trunk/SOURCE/chemistry_model_mod.f90 (copied) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/outflow_turbulence.f90 (copied) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/lex.yy.c (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/initialize_kpp_ctrl_template.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90 (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/rosenbrock_vec.f90.save (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Merge chemistry branch at r3297 to trunk