# # ChangeLog for / # # Generated by Trac 1.0.5 # Nov 30, 2024 11:39:51 PM Fri, 07 Dec 2018 11:48:57 GMT forkel [3606] * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/simple.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/simplep.eqn (modified) bug fix for machanisms simple and simplep Tue, 04 Dec 2018 16:03:51 GMT sward [3602] * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) document_changes from previous commit Tue, 04 Dec 2018 16:00:04 GMT sward [3601] * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) Added check for missing NAVIGATION_DATA input file Tue, 04 Dec 2018 13:49:07 GMT banzhafs [3600] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) chemistry_model_mod code update to comply PALM coding rules Tue, 04 Dec 2018 08:40:18 GMT maronga [3597] * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/surface_layer_fluxes_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/time_integration_spinup.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) revised calculation of near surface air potential temperature Mon, 03 Dec 2018 13:51:13 GMT kanani [3593] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/wind_turbine_model_mod.f90 (modified) Bugfix for missing array allocation (biometeorology_mod), remove ... Mon, 03 Dec 2018 12:38:40 GMT suehring [3592] * palm/trunk/SOURCE/pmc_general_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) Determine number of coupled arrays dynamically Fri, 30 Nov 2018 16:24:17 GMT forkel [3590] * palm/trunk/UTIL/chemistry/gasphase_preproc/Readme_KPP4PALM.odt (modified) A few updates and corrections in Readme file Fri, 30 Nov 2018 15:09:51 GMT suehring [3589] * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) Remove erroneous UTF encoding; last commit documented Fri, 30 Nov 2018 13:52:19 GMT sward [3587] * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) Added MAS substep time to agent output Fri, 30 Nov 2018 13:20:29 GMT forkel [3586] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Changed character length of name in species_def and photols_def to 15 Fri, 30 Nov 2018 12:57:47 GMT forkel [3585] * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/lex.yy.c (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/y.tab.c (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/src/y.tab.h (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/kpp4palm.exe (deleted) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.kpp (modified) Comments in all chem_gasphase_mod.kpp, add def_salsagas/*.f90, ... Thu, 29 Nov 2018 19:16:36 GMT suehring [3582] * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) * palm/trunk/UTIL (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp/bin/kpp (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.exe (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+phstat (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsa+simple (copied) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_salsagas (copied) Merge branch salsa with trunk Thu, 29 Nov 2018 17:04:25 GMT schwenkel [3581] * palm/trunk/TESTS/cases/warm_air_bubble_lcm/case_config.yml (modified) Disable lcm test case Thu, 29 Nov 2018 16:37:24 GMT schwenkel [3580] * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/INPUT (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/INPUT/dispersion_eulerian_and_lpm_p3d (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/INPUT/dispersion_eulerian_and_lpm_topo (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/MONITORING (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/MONITORING/dispersion_eulerian_and_lpm_rc (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/OUTPUT (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/OUTPUT/dispersion_eulerian_and_lpm_pr.nc (added) * palm/trunk/TESTS/cases/dispersion_eulerian_and_lpm/case_config.yml (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/INPUT (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/INPUT/warm_air_bubble_lcm_p3d (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/MONITORING (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/MONITORING/warm_air_bubble_lcm_rc (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/OUTPUT (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/OUTPUT/warm_air_bubble_lcm_pr.nc (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/OUTPUT/warm_air_bubble_lcm_pts.nc (added) * palm/trunk/TESTS/cases/warm_air_bubble_lcm/case_config.yml (added) added test cases Thu, 29 Nov 2018 15:32:39 GMT suehring [3579] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/nesting_offl_mod.f90 (modified) * palm/trunk/SOURCE/synthetic_turbulence_generator_mod.f90 (modified) Bugfix in initialization of synthetic turbulence generator and ... Thu, 29 Nov 2018 13:11:15 GMT schwenkel [3577] * palm/trunk/SOURCE/lpm_init.f90 (modified) Changed number concentration unit to SI standard Wed, 28 Nov 2018 15:06:32 GMT kanani [3575] * palm/trunk/SOURCE/check_parameters.f90 (modified) Bugfix for output time levels in parallel NetCDF output with spinup ... Wed, 28 Nov 2018 13:14:39 GMT raasch [3574] * palm/trunk/SCRIPTS/palmrun (modified) syntax-error in last commit fixed Wed, 28 Nov 2018 13:03:44 GMT raasch [3573] * palm/trunk/SCRIPTS/palmrun (modified) bugfixes: don't check the .palm.iofiles in restart runs + wrong cd- ... Wed, 28 Nov 2018 11:40:28 GMT suehring [3572] * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/surface_output_mod.f90 (modified) Additional output for radiative fluxes added Tue, 27 Nov 2018 17:44:21 GMT kanani [3570] * palm/trunk/SCRIPTS/palmrun (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) Fix too long lines (chemistry_model_mod, chem_emissions_mod), correct ... Tue, 27 Nov 2018 17:03:40 GMT kanani [3569] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/uv_exposure_model_mod.f90 (deleted) Fix for biomet output (ticket:757), merge of uv_exposure into ... Tue, 27 Nov 2018 16:07:59 GMT raasch [3568] * palm/trunk/SOURCE/ocean_mod.f90 (modified) bugifx: calculate equation of state for seawater even if salinity is ... Tue, 27 Nov 2018 13:59:21 GMT maronga [3567] * palm/trunk/SCRIPTS/.csd.config.default (added) * palm/trunk/SCRIPTS/palm_csd (added) * palm/trunk/SCRIPTS/palm_csd_files (added) * palm/trunk/SCRIPTS/palm_csd_files/__init__.py (added) * palm/trunk/SCRIPTS/palm_csd_files/palm_csd_netcdf_interface.py (added) * palm/trunk/SCRIPTS/palm_csd_files/palm_csd_tools.py (added) * palm/trunk/SCRIPTS/palm_wd (modified) added first version of palm_csd (preprocessing tool for creating ... Mon, 26 Nov 2018 12:52:01 GMT knoop [3563] * palm/trunk/SCRIPTS/testsuite (deleted) Deleted testsuite script Fri, 23 Nov 2018 12:06:35 GMT suehring [3562] * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/lpm_advec.f90 (modified) * palm/trunk/SOURCE/lpm_boundary_conds.f90 (modified) variables documented Fri, 23 Nov 2018 11:39:44 GMT knoop [3561] * palm/trunk/SCRIPTS/palmtest (modified) palmtest: enabled content-check of all found netcdf variables Fri, 23 Nov 2018 09:20:21 GMT raasch [3560] * palm/trunk/SOURCE/lpm.f90 (modified) * palm/trunk/SOURCE/lpm_init.f90 (modified) * palm/trunk/SOURCE/lpm_read_restart_file.f90 (modified) * palm/trunk/SOURCE/lpm_write_restart_file.f90 (modified) * palm/trunk/SOURCE/mod_particle_attributes.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) bugfix to guarantee correct particle releases in case that the ... Thu, 22 Nov 2018 17:50:32 GMT knoop [3559] * palm/trunk/TESTS/cases/example_cbl (deleted) * palm/trunk/TESTS/cases/example_cbl_restart2 (deleted) * palm/trunk/TESTS/cases/example_cbl_user_code (deleted) removed example_cbl test case redundancy Thu, 22 Nov 2018 17:39:19 GMT kanani [3558] * palm/trunk/TESTS/cases/urban_environment/INPUT/urban_environment_rlw (added) * palm/trunk/TESTS/cases/urban_environment/INPUT/urban_environment_rsw (added) * palm/trunk/TESTS/cases/urban_environment_restart/INPUT/urban_environment_restart_dynamic (added) * palm/trunk/TESTS/cases/urban_environment_restart/INPUT/urban_environment_restart_rlw (added) * palm/trunk/TESTS/cases/urban_environment_restart/INPUT/urban_environment_restart_rsw (added) * palm/trunk/TESTS/cases/urban_environment_restart/INPUT/urban_environment_restart_static (added) Replace TESTS/cases/urban_environment/INPUT files by symbolic links Thu, 22 Nov 2018 16:01:22 GMT eckhard [3557] * palm/trunk/UTIL/inifor/src/inifor.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_control.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_defs.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_grid.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_io.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_transform.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_types.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_util.f90 (modified) inifor: Updated documentation Thu, 22 Nov 2018 14:11:57 GMT suehring [3556] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) restart mechanism for surface elements commented, some formatting Thu, 22 Nov 2018 13:50:37 GMT raasch [3555] * palm/trunk/SCRIPTS/palmrun (modified) sed-command to remove repeated space-characters replaced by tr- ... Thu, 22 Nov 2018 11:24:52 GMT gronemeier [3554] * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/data_output_profiles.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/posix_calls_from_fortran.f90 (modified) * palm/trunk/SOURCE/subsidence_mod.f90 (modified) renamed variable if to ivar; add variable description Thu, 22 Nov 2018 10:30:48 GMT suehring [3553] * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) last commit documented Thu, 22 Nov 2018 10:28:35 GMT suehring [3552] * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) further variables documented Wed, 21 Nov 2018 17:05:46 GMT suehring [3551] * palm/trunk/SOURCE/advec_ws.f90 (modified) optimization of advec_ws Wed, 21 Nov 2018 16:01:01 GMT gronemeier [3550] * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) calculate diss production same in vector and cache optimization; move ... Wed, 21 Nov 2018 15:44:44 GMT raasch [3549] * palm/trunk/SCRIPTS/batch_scp (modified) * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/SCRIPTS/palmrun (modified) ssh-call for submitting batch jobs on remote systems modified to ... Wed, 21 Nov 2018 13:21:24 GMT suehring [3547] * palm/trunk/SOURCE/advec_s_pw.f90 (modified) * palm/trunk/SOURCE/advec_s_up.f90 (modified) * palm/trunk/SOURCE/advec_u_pw.f90 (modified) * palm/trunk/SOURCE/advec_u_up.f90 (modified) * palm/trunk/SOURCE/advec_v_pw.f90 (modified) * palm/trunk/SOURCE/advec_v_up.f90 (modified) * palm/trunk/SOURCE/advec_w_pw.f90 (modified) * palm/trunk/SOURCE/advec_w_up.f90 (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/data_output_spectra.f90 (modified) * palm/trunk/SOURCE/diffusion_s.f90 (modified) * palm/trunk/SOURCE/diffusion_u.f90 (modified) * palm/trunk/SOURCE/diffusion_v.f90 (modified) * palm/trunk/SOURCE/diffusion_w.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/surface_layer_fluxes_mod.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/virtual_flight_mod.f90 (modified) variable description added some routines Wed, 21 Nov 2018 11:19:41 GMT gronemeier [3545] * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/turbulence_closure_mod.f90 (modified) * palm/trunk/TESTS/cases/rans_tkee/INPUT/rans_tkee_p3d (modified) removed debug output; removed rans_mode from namelist; altered order ... Tue, 20 Nov 2018 17:06:15 GMT suehring [3543] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) changes from last commit documented Tue, 20 Nov 2018 17:04:13 GMT suehring [3542] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/exchange_horiz_2d.f90 (modified) * palm/trunk/SOURCE/init_pegrid.f90 (modified) * palm/trunk/SOURCE/lpm_exchange_horiz.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) Revise ghost point exchange in netcdf-data input; new routine for ... Tue, 20 Nov 2018 16:35:55 GMT gronemeier [3541] * palm/trunk/TESTS/cases/rans_tkee (added) * palm/trunk/TESTS/cases/rans_tkee/INPUT (added) * palm/trunk/TESTS/cases/rans_tkee/INPUT/rans_tkee_p3d (added) * palm/trunk/TESTS/cases/rans_tkee/INPUT/rans_tkee_static (added) * palm/trunk/TESTS/cases/rans_tkee/MONITORING (added) * palm/trunk/TESTS/cases/rans_tkee/MONITORING/rans_tkee_rc (added) * palm/trunk/TESTS/cases/rans_tkee/OUTPUT (added) * palm/trunk/TESTS/cases/rans_tkee/OUTPUT/rans_tkee_pr.nc (added) * palm/trunk/TESTS/cases/rans_tkee/OUTPUT/rans_tkee_ts.nc (added) * palm/trunk/TESTS/cases/rans_tkee/case_config.yml (added) add test case for RANS mode (TKE-e) Tue, 20 Nov 2018 15:27:18 GMT gronemeier [3540] * palm/trunk/TESTS/cases/example_cbl/MONITORING/example_cbl_rc (modified) * palm/trunk/TESTS/cases/example_cbl/OUTPUT/example_cbl_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl/OUTPUT/example_cbl_ts.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart/OUTPUT/example_cbl_restart_pr.001.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart/OUTPUT/example_cbl_restart_ts.001.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart2/OUTPUT/example_cbl_restart2_pr.002.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart2/OUTPUT/example_cbl_restart2_ts.002.nc (modified) * palm/trunk/TESTS/cases/example_cbl_short/MONITORING/example_cbl_short_rc (modified) * palm/trunk/TESTS/cases/example_cbl_short/OUTPUT/example_cbl_short_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl_short/OUTPUT/example_cbl_short_ts.nc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/MONITORING/example_cbl_user_code_rc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/OUTPUT/example_cbl_user_code_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/OUTPUT/example_cbl_user_code_ts.nc (modified) * palm/trunk/TESTS/cases/test_oceanml/MONITORING/test_oceanml_rc (modified) * palm/trunk/TESTS/cases/test_oceanml/OUTPUT/test_oceanml_ts.nc (modified) * palm/trunk/TESTS/cases/urban_environment/MONITORING/urban_environment_rc (modified) * palm/trunk/TESTS/cases/urban_environment_restart/MONITORING/urban_environment_restart_rc (modified) update test cases Tue, 20 Nov 2018 10:55:41 GMT suehring [3538] * palm/trunk/SOURCE/advec_s_pw.f90 (modified) * palm/trunk/SOURCE/advec_s_up.f90 (modified) * palm/trunk/SOURCE/advec_u_pw.f90 (modified) * palm/trunk/SOURCE/advec_u_up.f90 (modified) * palm/trunk/SOURCE/advec_v_pw.f90 (modified) * palm/trunk/SOURCE/advec_v_up.f90 (modified) * palm/trunk/SOURCE/advec_w_pw.f90 (modified) * palm/trunk/SOURCE/advec_w_up.f90 (modified) * palm/trunk/SOURCE/buoyancy.f90 (modified) * palm/trunk/SOURCE/coriolis.f90 (modified) * palm/trunk/SOURCE/init_grid.f90 (modified) Remove unnecessary double masking of topography in advection and ... Tue, 20 Nov 2018 10:53:14 GMT eckhard [3537] * palm/trunk/UTIL/inifor/src/inifor.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_defs.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_grid.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_io.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_transform.f90 (modified) inifor: COSMO-D2 support Mon, 19 Nov 2018 15:35:16 GMT raasch [3534] * palm/trunk/SCRIPTS (modified) * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/SCRIPTS/palmrun (modified) * palm/trunk/SOURCE/poismg_mod.f90 (modified) * palm/trunk/UTIL/Makefile_utilities (modified) * palm/trunk/UTIL/inifor/src/inifor_defs.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_io.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_transform.f90 (modified) inifor integrated in build mechanism, some bugfixes in inifor to ... Thu, 15 Nov 2018 21:03:15 GMT gronemeier [3529] * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) change date format in output files; add global attributes; change ... Thu, 15 Nov 2018 19:07:11 GMT suehring [3528] * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) Bugfix in raytracing - add an epsilon value to overcome precision- ... Wed, 14 Nov 2018 16:06:14 GMT kanani [3525] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/biometeorology_ipt_mod.f90 (deleted) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/biometeorology_pet_mod.f90 (deleted) * palm/trunk/SOURCE/biometeorology_pt_mod.f90 (deleted) * palm/trunk/SOURCE/biometeorology_utci_mod.f90 (deleted) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) Changes related to clean-up of biometeorology (by dom_dwd_user) Wed, 14 Nov 2018 13:36:44 GMT raasch [3524] * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/lpm_init.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/poismg_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) unused variables removed, missing working precision added, missing ... Tue, 13 Nov 2018 16:09:31 GMT suehring [3523] * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/UTIL/Makefile_utilities (modified) * palm/trunk/UTIL/surface_output_processing/surface_output_to_vtk.f90 (modified) Implement interface for posix conform C-systemcalls in order to ... Tue, 13 Nov 2018 12:14:36 GMT suehring [3522] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (modified) Sampling of variables extended in virtual measurement module Mon, 12 Nov 2018 18:10:23 GMT suehring [3518] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) additional checks for static input file Mon, 12 Nov 2018 16:27:08 GMT gronemeier [3517] * palm/trunk/SOURCE/check_parameters.f90 (modified) bugfix: renamed w*2pt* and w*pt*2 in w*2theta* and w*theta*2, ... Mon, 12 Nov 2018 15:49:39 GMT gronemeier [3516] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) bugfix: difference in z coordinate between file and PALM must be ... Fri, 09 Nov 2018 18:09:51 GMT gronemeier [3512] * palm/trunk/SOURCE/init_masks.f90 (modified) Bugfix: do not output ghost points if mask_x/y_loop is not specified ... Thu, 08 Nov 2018 14:28:46 GMT schwenkel [3507] * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) Minor bugfixes for bcm cache version and initializing prr Thu, 08 Nov 2018 10:36:37 GMT knoop [3506] * palm/trunk/INSTALL/palm_installer_components (modified) updated palm_installer_components to match new palmbuild and palmrun ... Thu, 08 Nov 2018 09:14:30 GMT raasch [3505] * palm/trunk/SCRIPTS/palmrun (modified) job folders are created in case that they do not exist Wed, 07 Nov 2018 14:45:23 GMT suehring [3502] * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) Disable initialization of building roofs with ground-floor-level ... Wed, 07 Nov 2018 10:57:45 GMT gronemeier [3500] * palm/trunk/INSTALL/example_cbl_p3d (modified) * palm/trunk/INSTALL/example_cbl_rc (modified) * palm/trunk/INSTALL/test_oceanml_p3d (modified) * palm/trunk/INSTALL/test_oceanml_rc (modified) bugfix: renamed pt to theta for runs in installation directory Wed, 07 Nov 2018 10:55:15 GMT suehring [3499] * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/UTIL/Makefile_utilities (modified) Temporarily avoid compilation of post-processing tool for surface ... Wed, 07 Nov 2018 10:53:03 GMT gronemeier [3498] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) Bugfix: print error message by processor which encounters the error Tue, 06 Nov 2018 17:15:18 GMT suehring [3497] * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) Remove write statement Tue, 06 Nov 2018 15:59:50 GMT suehring [3496] * palm/trunk/UTIL/surface_output_processing/surface_output_to_vtk.f90 (modified) Use subroutine call for intrinsic routine fseek instead of function ... Tue, 06 Nov 2018 15:22:17 GMT kanani [3495] * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) bugfix in calculating the apparent solar positions, resort ONLY list ... Tue, 06 Nov 2018 14:51:27 GMT suehring [3494] * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/salsa_util_mod.f90 (modified) * palm/trunk/SOURCE/surface_output_mod.f90 (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (modified) * palm/trunk/UTIL/Makefile_utilities (modified) * palm/trunk/UTIL/surface_output_processing (added) * palm/trunk/UTIL/surface_output_processing/surface_output_parin (added) * palm/trunk/UTIL/surface_output_processing/surface_output_to_vtk.f90 (added) Surface output revised and some bugs are fixed + new post-processing ... Mon, 05 Nov 2018 07:18:02 GMT maronga [3487] * palm/trunk/SCRIPTS/palmrungui (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) processed comments from a previous revision, adjustments of ... Mon, 05 Nov 2018 06:20:18 GMT maronga [3486] * palm/trunk/SOURCE/land_surface_model_mod.f90 (modified) bugfix in land surface model for the case case of excessive ... Sat, 03 Nov 2018 17:09:40 GMT gronemeier [3485] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/TESTS/cases/example_cbl/OUTPUT/example_cbl_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl/OUTPUT/example_cbl_ts.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart/OUTPUT/example_cbl_restart_pr.001.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart/OUTPUT/example_cbl_restart_ts.001.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart2/OUTPUT/example_cbl_restart2_pr.002.nc (modified) * palm/trunk/TESTS/cases/example_cbl_restart2/OUTPUT/example_cbl_restart2_ts.002.nc (modified) * palm/trunk/TESTS/cases/example_cbl_short/OUTPUT/example_cbl_short_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl_short/OUTPUT/example_cbl_short_ts.nc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/OUTPUT/example_cbl_user_code_pr.nc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/OUTPUT/example_cbl_user_code_ts.nc (modified) * palm/trunk/TESTS/cases/test_oceanml/OUTPUT/test_oceanml_ts.nc (modified) Add information about reference point to output files; corrected ... Fri, 02 Nov 2018 14:41:25 GMT hellstea [3484] * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/pmc_interface_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) Nesting interpolation made mass-conservative Fri, 02 Nov 2018 14:19:26 GMT raasch [3483] * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/cpulog_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/surface_output_mod.f90 (modified) bugfix: misplaced positions of cpp-directives for netCDF and MPI ... Fri, 02 Nov 2018 09:14:13 GMT raasch [3481] * palm/trunk/SOURCE/salsa_mod.f90 (modified) temporary variable cc introduced to circumvent a possible Intel18 ... Thu, 01 Nov 2018 16:00:30 GMT gronemeier [3479] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) reworked check for output quantities; assign new palm-error numbers, ... Wed, 31 Oct 2018 20:26:44 GMT maronga [3477] * palm/tags/release-6.0 (copied) The PALM model version 6.0 created. Tue, 30 Oct 2018 21:16:31 GMT kanani [3475] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) Add option for using MRT from RTM instead of simplified global value Tue, 30 Oct 2018 21:07:39 GMT kanani [3474] * palm/trunk/SCRIPTS/.palm.iofiles (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/uv_exposure_model_mod.f90 (modified) Add netcdf input for uv exposure model (netcdf_data_input_mod, ... Tue, 30 Oct 2018 20:50:15 GMT suehring [3473] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (modified) Bugfix for previous commit Tue, 30 Oct 2018 20:43:50 GMT suehring [3472] * palm/trunk/SCRIPTS/.palm.iofiles (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/virtual_measurement_mod.f90 (copied) module for virtual measurements added (in a preliminary state); new ... Tue, 30 Oct 2018 20:05:07 GMT kanani [3469] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/indoor_model_mod.f90 (added) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) Implement indoor climate and energy demand model Tue, 30 Oct 2018 19:05:21 GMT suehring [3467] * palm/trunk/EXAMPLES/test_salsa (copied) * palm/trunk/SCRIPTS/.palm.iofiles (modified) * palm/trunk/SOURCE (modified) * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/advec_ws.f90 (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/boundary_conds.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/data_output_mask.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/init_masks.f90 (modified) * palm/trunk/SOURCE/lpm_pack_arrays.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/SOURCE/read_restart_data_mod.f90 (modified) * palm/trunk/SOURCE/salsa_mod.f90 (copied) * palm/trunk/SOURCE/salsa_util_mod.f90 (copied) * palm/trunk/SOURCE/sor.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/surface_mod.f90 (modified) * palm/trunk/SOURCE/swap_timelevel.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/time_integration_spinup.f90 (modified) * palm/trunk/SOURCE/vertical_nesting_mod.f90 (modified) * palm/trunk/SOURCE/write_restart_data_mod.f90 (modified) Branch salsa @3446 re-integrated into trunk Tue, 30 Oct 2018 18:26:17 GMT kanani [3465] * palm/trunk/SCRIPTS/.palm.config.crayb (added) * palm/trunk/SCRIPTS/.palm.config.crayb_debug (added) * palm/trunk/SCRIPTS/.palm.config.crayh (deleted) Replace crayh config file, add cray debug config file Tue, 30 Oct 2018 18:08:55 GMT kanani [3464] * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/biometeorology_pt_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) from branch resler@3462: add MRT shaping function ... Tue, 30 Oct 2018 15:25:27 GMT knoop [3461] * palm/trunk/TESTS/cases/warm_air_bubble_with_bcm/INPUT/warm_air_bubble_with_bcm_p3d (modified) * palm/trunk/TESTS/cases/warm_air_bubble_with_bcm/MONITORING/warm_air_bubble_with_bcm_rc (modified) * palm/trunk/TESTS/cases/warm_air_bubble_with_bcm/OUTPUT/warm_air_bubble_with_bcm_pr.nc (modified) * palm/trunk/TESTS/cases/warm_air_bubble_with_bcm/OUTPUT/warm_air_bubble_with_bcm_ts.nc (modified) * palm/trunk/TESTS/cases/warm_air_bubble_with_bcm/case_config.yml (modified) Fixed and enabled test case warm_air_bubble_with_bcm Tue, 30 Oct 2018 15:04:11 GMT gronemeier [3459] * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/TESTS/cases/example_cbl/MONITORING/example_cbl_rc (modified) * palm/trunk/TESTS/cases/example_cbl_short/MONITORING/example_cbl_short_rc (modified) * palm/trunk/TESTS/cases/example_cbl_user_code/MONITORING/example_cbl_user_code_rc (modified) * palm/trunk/TESTS/cases/test_oceanml/MONITORING/test_oceanml_rc (modified) add longitude and latitude to output files; update run_control files ... Tue, 30 Oct 2018 14:51:23 GMT kanani [3458] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/chem_emissions_mod.f90 (modified) * palm/trunk/SOURCE/chem_modules.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/date_and_time_mod.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/netcdf_data_input_mod.f90 (modified) * palm/trunk/SOURCE/palm.f90 (modified) * palm/trunk/SOURCE/prognostic_equations.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/Makefile (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/bin/kpp4palm.ksh (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/create_kpp_module.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/expand_decomp.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/fortran_file_vec.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/main.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/program_line.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.C (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/src/utils.h (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/Rosenbrock_vec.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_header (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/kp4_compress_subroutines (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/kpp4palm/templates/module_header (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_cbm4/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_passive1/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstat/phstat.eqn (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.f90 (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/chem_gasphase_mod.kpp (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.eqn (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_phstatp/phstatp.spc (added) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simple/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_simplep/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/mechanisms/def_smog/chem_gasphase_mod.f90 (modified) * palm/trunk/UTIL/chemistry/gasphase_preproc/run_kpp4palm.ksh (modified) Reintegrated fixes/changes from branch chemistry Tue, 30 Oct 2018 14:31:58 GMT raasch [3457] * palm/trunk/SCRIPTS/palmtest (modified) options -d -h in palmtest script renamed too Tue, 30 Oct 2018 14:29:54 GMT eckhard [3456] * palm/trunk/UTIL/inifor/README (modified) * palm/trunk/UTIL/inifor/src/inifor.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_defs.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_grid.f90 (modified) * palm/trunk/UTIL/inifor/src/inifor_io.f90 (modified) inifor: Removed surface forcing and internal arrays from netCDF output Tue, 30 Oct 2018 14:12:31 GMT raasch [3455] * palm/trunk/SCRIPTS/.palm.config.crayh (modified) * palm/trunk/SCRIPTS/.palm.config.default (modified) * palm/trunk/SCRIPTS/.palm.config.default.in (modified) * palm/trunk/SCRIPTS/.palm.config.default_trace (modified) * palm/trunk/SCRIPTS/.palm.config.idefix (modified) * palm/trunk/SCRIPTS/palmbuild (modified) * palm/trunk/SCRIPTS/palmrun (modified) options -h and -d renamed -c and -r, respectively, job_queue renamed ... Tue, 30 Oct 2018 14:02:30 GMT schwenkel [3454] * palm/trunk/SOURCE/check_parameters.f90 (modified) Bugfix: Missing air_chemistry statement for profile check Tue, 30 Oct 2018 13:13:34 GMT schwenkel [3452] * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/flow_statistics.f90 (modified) Bugfix for profiles output Mon, 29 Oct 2018 19:36:56 GMT suehring [3449] * palm/trunk/SOURCE/basic_constants_and_equations_mod.f90 (modified) * palm/trunk/SOURCE/chemistry_model_mod.f90 (modified) * palm/trunk/SOURCE/plant_canopy_model_mod.f90 (modified) * palm/trunk/SOURCE/radiation_model_mod.f90 (modified) * palm/trunk/SOURCE/urban_surface_mod.f90 (modified) * palm/trunk/TESTS/cases/urban_environment/MONITORING/urban_environment_rc (modified) * palm/trunk/TESTS/cases/urban_environment_restart/MONITORING/urban_environment_restart_rc (modified) Branch resler -r 3439 re-integrated into current trunk: RTM 3.0, ... Mon, 29 Oct 2018 18:14:31 GMT kanani [3448] * palm/trunk/SOURCE/Makefile (modified) * palm/trunk/SOURCE/average_3d_data.f90 (modified) * palm/trunk/SOURCE/biometeorology_ipt_mod.f90 (added) * palm/trunk/SOURCE/biometeorology_mod.f90 (modified) * palm/trunk/SOURCE/biometeorology_pet_mod.f90 (added) * palm/trunk/SOURCE/biometeorology_pt_mod.f90 (added) * palm/trunk/SOURCE/biometeorology_utci_mod.f90 (added) * palm/trunk/SOURCE/check_parameters.f90 (modified) * palm/trunk/SOURCE/data_output_2d.f90 (modified) * palm/trunk/SOURCE/data_output_3d.f90 (modified) * palm/trunk/SOURCE/header.f90 (modified) * palm/trunk/SOURCE/init_3d_model.f90 (modified) * palm/trunk/SOURCE/modules.f90 (modified) * palm/trunk/SOURCE/multi_agent_system_mod.f90 (modified) * palm/trunk/SOURCE/netcdf_interface_mod.f90 (modified) * palm/trunk/SOURCE/parin.f90 (modified) * palm/trunk/SOURCE/sum_up_3d_data.f90 (modified) * palm/trunk/SOURCE/time_integration.f90 (modified) * palm/trunk/SOURCE/uv_exposure_model_mod.f90 (modified) Implementation of human thermal indices (from branch biomet_p2 at r3444) Mon, 29 Oct 2018 15:52:54 GMT eckhard [3447] * palm/trunk/UTIL/inifor/Makefile (modified) * palm/trunk/UTIL/inifor/Makefile.gnu (modified) * palm/trunk/UTIL/inifor/Makefile.ifort (modified) * palm/trunk/UTIL/inifor/src/get_netcdf_variable.inc (deleted) * palm/trunk/UTIL/inifor/src/inifor_control.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_defs.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_grid.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_io.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_transform.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_types.f90 (moved) * palm/trunk/UTIL/inifor/src/inifor_util.f90 (moved) inifor: Renamed source files for compatibilty with PALM build system Mon, 29 Oct 2018 12:23:02 GMT schwenkel [3445] * palm/trunk/SOURCE/bulk_cloud_model_mod.f90 (modified) Minor bugfix and use of subroutine for supersaturation calculation in ... Mon, 29 Oct 2018 10:31:52 GMT schwenkel [3444] * palm/trunk/SOURCE/surface_mod.f90 (modified) Bugfix in surface_wrd_local for cloud and rain water flux Fri, 26 Oct 2018 18:35:15 GMT gronemeier [3436] * palm/trunk/SOURCE/Makefile (modified) bugfix: add dependencies to user_data_output_mask