#$Id: .mrun.config.yonsei2011 998 2012-09-11 09:44:06Z franke $ # recommended settings for Department of Atmospheric Sciences # machines climate0-climate3 (host identifier "lcyon") # and for IBM-Regatta-Power6 at KISTI (host identifier "ibmkisti") # DON'T FORGET to replace <...> by your respective valid username #column 1 column 2 column 3 #name of variable value of variable (~ must not be used) scope #---------------------------------------------------------------------------- %mainprog palm.f90 %base_directory $HOME/palm/current_version %base_data ~/palm/current_version/JOBS %source_path $base_directory/trunk/SOURCE %add_source_path $base_directory/USER_CODE/$fname %depository_path $base_directory/MAKE_DEPOSITORY # %host_identifier climate0 lcyon %host_identifier gaia* ibmkisti # %remote_username lcyon parallel %tmp_user_catalog $base_directory/work lcyon parallel %tmp_data_catalog $base_directory/work lcyon parallel %compiler_name mpif90 lcyon parallel %compiler_name_ser ifort lcyon parallel %cpp_options -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf lcyon parallel %netcdf_inc -I:/usr/local/netcdf/363_intel11/include lcyon parallel %netcdf_lib -L/usr/local/netcdf/363_intel11/lib:-lnetcdf lcyon parallel %mopts -j:4 lcyon parallel %fopts -fpe0:-axW:-O3:-cpp:-r8:-fp-model:precise:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian:-I:/usr/local/mpich2/intel11/include lcyon parallel %lopts -fpe0:-axW:-O3:-cpp:-r8:-fp-model:precise:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib:-L:/usr/local/mpich2/intel11/lib lcyon parallel %memory 2000 lcyon parallel # %compiler_name mpxlf95_r ibmkisti parallel %compiler_name_ser xlf95 ibmkisti parallel %cpp_options -qsuffix=cpp=f90:-WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,-D__netcdf=__netcdf,-D__netcdf_64bit=__netcdf_64bit ibmkisti parallel %netcdf_inc -I:/applic/local/64BIT/NETCDF/V363/include ibmkisti parallel %netcdf_lib -L/applic/local/64BIT/NETCDF/V363/lib:-lnetcdf ibmkisti parallel %fopts -O3:-g:-qfloat=nomaf:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr6:-qarch=pwr6:-qnosave:-qnoescape ibmkisti parallel %lopts -O3:-g:-qfloat=nomaf:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr6:-qarch=pwr6:-qnosave:-qnoescape:-lesslsmp ibmkisti parallel %memory 2000 ibmkisti parallel %cpumax 1000 ibmkisti parallel %numprocs 4 ibmkisti parallel %remote_username ibmkisti parallel %tmp_data_catalog /gpfs1//palm_restart_data ibmkisti parallel %tmp_user_catalog /gpfs1/ ibmkisti parallel # %write_binary true restart # #---------------------------------------------------------------------------- # INPUT-commands, executed before running PALM - lines must start with "IC:" #---------------------------------------------------------------------------- #IC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && assign -F cachea:512:1:1 f:BININ # #---------------------------------------------------------------------------- # ERROR-commands - executed when program terminates abnormally #---------------------------------------------------------------------------- EC:[[ \$locat = compile && ( \$( echo \$localhost | cut -c1-3 ) = t3e ) ]] && cat cflist.out EC:[[ \$locat = execution ]] && cat RUN_CONTROL EC:[[ \$locat = execution ]] && cat PARTICLE_INFOS/* EC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && ls -al EC:[[ \$( echo \$localhost | cut -c1-3 ) = ibm ]] && ls -al # #---------------------------------------------------------------------------- # OUTPUT-commands - executed when program terminates normally #---------------------------------------------------------------------------- # # Combine 1D- and 3D-profile output (these files are not usable for plotting) OC:[[ -f LIST_PROFIL_1D ]] && cat LIST_PROFIL_1D >> LIST_PROFILE OC:[[ -f LIST_PROFIL ]] && cat LIST_PROFIL >> LIST_PROFILE # # Combine all particle information files OC:[[ -f PARTICLE_INFOS/_0000 ]] && cat PARTICLE_INFOS/* >> PARTICLE_INFO # # tar all 3D-plot-data files in case that compressed output is switched on OC:[[ -f PLOT3D_COMPRESSED ]] && tar cf PLOT3D_DATA PLOT3D_DATA_* # #---------------------------------------------------------------------------- # List of input-files #---------------------------------------------------------------------------- PARIN in:job d3# $base_data/$fname/INPUT _p3d PARIN in:job pcr $base_data/$fname/INPUT _pcr PARIN in:job d3f $base_data/$fname/INPUT _p3df TOPOGRAPHY_DATA in:locopt d3#:d3f $base_data/$fname/INPUT _topo BININ in:loc:flpe d3f:rec $base_data/$fname/RESTART _d3d PARTICLE_RESTART_DATA_IN in:loc:flpe prtf $base_data/$fname/RESTART _rprt DATA_1D_PR_NETCDF in:locopt prf $base_data/$fname/OUTPUT _pr nc DATA_1D_SP_NETCDF in:locopt spf $base_data/$fname/OUTPUT _sp nc DATA_1D_TS_NETCDF in:locopt tsf $base_data/$fname/OUTPUT _ts nc DATA_1D_PTS_NETCDF in:locopt ptsf $base_data/$fname/OUTPUT _pts nc DATA_2D_XY_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy nc DATA_2D_XY_AV_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy_av nc DATA_2D_XZ_NETCDF in:locopt xzf $base_data/$fname/OUTPUT _xz nc DATA_2D_YZ_NETCDF in:locopt yzf $base_data/$fname/OUTPUT _yz nc #DATA_3D_NETCDF in:locopt 3df $base_data/$fname/OUTPUT _3d nc DATA_PRT_NETCDF in:locopt:pe prtf $base_data/$fname/OUTPUT _prt # #---------------------------------------------------------------------------- # List of output-files #---------------------------------------------------------------------------- BINOUT out:loc:flpe restart $base_data/$fname/RESTART _d3d PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART _rprt # RUN_CONTROL out:loc:tr d3#:pcr $base_data/$fname/MONITORING _rc RUN_CONTROL out:loc:tra d3f $base_data/$fname/MONITORING _rc HEADER out:loc:tr d3#:pcr $base_data/$fname/MONITORING _header HEADER out:loc:tra d3f $base_data/$fname/MONITORING _header CPU_MEASURES out:loc:tr d3#:pcr $base_data/$fname/MONITORING _cpu CPU_MEASURES out:loc:tra d3f $base_data/$fname/MONITORING _cpu DVRP_LOG out:loc:tr dv# $base_data/$fname/MONITORING _dvrp_log DVRP_LOG out:loc:tra dvf $base_data/$fname/MONITORING _dvrp_log PARTICLE_INFO out:loc:tr pt# $base_data/$fname/MONITORING _prt_info PARTICLE_INFO out:loc:tra ptf $base_data/$fname/MONITORING _prt_info LIST_PROFIL out:loc:tr d3# $base_data/$fname/MONITORING _list_pr # DATA_1D_PR_NETCDF out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr nc #DATA_1D_PR_NETCDF out:loc pr#:prf $base_data/$fname/OUTPUT _pr nc DATA_1D_SP_NETCDF out:loc:tr sp#:spf $base_data/$fname/OUTPUT _sp nc #DATA_1D_SP_NETCDF out:loc sp#:spf $base_data/$fname/OUTPUT _sp nc DATA_1D_TS_NETCDF out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts nc #DATA_1D_TS_NETCDF out:loc ts#:tsf $base_data/$fname/OUTPUT _ts nc DATA_1D_PTS_NETCDF out:loc pts#:ptsf $base_data/$fname/OUTPUT _pts nc DATA_1D_PTS_NETCDF out:loc:tr pts#:ptsf $base_data/$fname/OUTPUT _pts nc #DATA_2D_XY_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy nc DATA_2D_XY_NETCDF out:loc xy#:xyf $base_data/$fname/OUTPUT _xy nc DATA_2D_XY_AV_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy_av nc #DATA_2D_XZ_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz nc DATA_2D_XZ_NETCDF out:loc xz#:xzf $base_data/$fname/OUTPUT _xz nc DATA_2D_XZ_AV_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz_av nc #DATA_2D_YZ_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz nc DATA_2D_YZ_NETCDF out:loc yz#:yzf $base_data/$fname/OUTPUT _yz nc DATA_2D_YZ_AV_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz_av nc DATA_3D_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d nc DATA_3D_AV_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d_av nc #DATA_3D_NETCDF out:loc 3d#:3df $base_data/$fname/OUTPUT _3d nc DATA_PRT_NETCDF out:loc:pe prt#:prtf $base_data/$fname/OUTPUT _prt DATA_PRT_NETCDF out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT _prt DATA_DVR out:loc:trpe dvr $base_data/$fname/OUTPUT _dvr PLOTTS_PAR out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_par PLOTTS_DATA out:loc:tr ts# $base_data/$fname/OUTPUT _ts_in PLOTTS_DATA out:loc:tra tsf $base_data/$fname/OUTPUT _ts_in PLOT1D_PAR out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_par PLOT1D_DATA out:loc:tr pr# $base_data/$fname/OUTPUT _pr_in PLOT1D_DATA out:loc:tr prf $base_data/$fname/OUTPUT _pr_in PLOTSP_X_PAR out:loc:tr spx $base_data/$fname/OUTPUT _spx_par PLOTSP_X_DATA out:loc:tr spx $base_data/$fname/OUTPUT _spx_in PLOTSP_Y_PAR out:loc:tr spy $base_data/$fname/OUTPUT _spy_par PLOTSP_Y_DATA out:loc:tr spy $base_data/$fname/OUTPUT _spy_in #PLOT2D_XY_GLOBAL out:loc:tr xy $base_data/$fname/OUTPUT _xy_par #PLOT2D_XY out:loc:tr xy $base_data/$fname/OUTPUT _xy_in #PLOT2D_XZ_GLOBAL out:loc:tr xz $base_data/$fname/OUTPUT _xz_par #PLOT2D_XZ out:loc:tr xz $base_data/$fname/OUTPUT _xz_in #PLOT2D_YZ_GLOBAL out:loc:tr yz $base_data/$fname/OUTPUT _yz_par #PLOT2D_YZ out:loc:tr yz $base_data/$fname/OUTPUT _yz_in PLOT3D_FLD out:loc:tr avs $base_data/$fname/OUTPUT _fld fld PLOT3D_COOR out:loc:tr avs $base_data/$fname/OUTPUT _avscor PLOT3D_DATA out:loc:tr avs $base_data/$fname/OUTPUT _avs PARTICLE_DATA out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT _prt_dat # # Output-example for using more than one statistical region #PLOTTS_PAR_0 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_0_par #PLOTTS_DATA_0 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_0_in #PLOTTS_DATA_0 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_0_in #PLOTTS_PAR_1 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_1_par #PLOTTS_DATA_1 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_1_in #PLOTTS_DATA_1 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_1_in #PLOTTS_PAR_2 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_2_par #PLOTTS_DATA_2 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_2_in #PLOTTS_DATA_2 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_2_in PLOT1D_PAR_0 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_0_par PLOT1D_DATA_0 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_0_in PLOT1D_PAR_1 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_1_par PLOT1D_DATA_1 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_1_in PLOT1D_PAR_2 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_2_par PLOT1D_DATA_2 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_2_in PLOT1D_PAR_3 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_3_par PLOT1D_DATA_3 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_3_in PLOT1D_PAR_4 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_4_par PLOT1D_DATA_4 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_4_in PLOTTS_PAR_0 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_par PLOTTS_DATA_0 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_in PLOTTS_DATA_0 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_in # #---------------------------------------------------------------------------- # List of input-files for coupled ocean model #---------------------------------------------------------------------------- PARIN_O in:job d3o# $base_data/$fname/INPUT _o_p3d PARIN_O in:job d3of $base_data/$fname/INPUT _o_p3df # #---------------------------------------------------------------------------- # List of output-files for coupled ocean model #---------------------------------------------------------------------------- RUN_CONTROL_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_rc RUN_CONTROL_O out:loc:tra d3of $base_data/$fname/MONITORING _o_rc HEADER_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_header HEADER_O out:loc:tra d3of $base_data/$fname/MONITORING _o_header CPU_MEASURES_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_cpu CPU_MEASURES_O out:loc:tra d3of $base_data/$fname/MONITORING _o_cpu LIST_PROFIL_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_list_pr # DATA_1D_PR_NETCDF_O out:loc:tr pro#:prof $base_data/$fname/OUTPUT _o_pr nc DATA_1D_SP_NETCDF_O out:loc:tr spo#:spof $base_data/$fname/OUTPUT _o_sp nc DATA_1D_TS_NETCDF_O out:loc:tr tso#:tsof $base_data/$fname/OUTPUT _o_ts nc DATA_1D_PTS_NETCDF_O out:loc:tr ptso#:ptsof $base_data/$fname/OUTPUT _o_pts nc DATA_2D_XY_NETCDF_O out:loc:tr xyo#:xyof $base_data/$fname/OUTPUT _o_xy nc DATA_2D_XY_AV_NETCDF_O out:loc:tr xyo#:xyof $base_data/$fname/OUTPUT _o_xy_av nc DATA_2D_XZ_NETCDF_O out:loc:tr xzo#:xzof $base_data/$fname/OUTPUT _o_xz nc DATA_2D_XZ_AV_NETCDF_O out:loc:tr xzo#:xzof $base_data/$fname/OUTPUT _o_xz_av nc DATA_2D_YZ_NETCDF_O out:loc:tr yzo#:yzof $base_data/$fname/OUTPUT _o_yz nc DATA_2D_YZ_AV_NETCDF_O out:loc:tr yzo#:yzof $base_data/$fname/OUTPUT _o_yz_av nc # A BLANK LINE MUST FOLLOW