Index: palm/trunk/DOC/app/index.html
===================================================================
--- palm/trunk/DOC/app/index.html	(revision 83)
+++ palm/trunk/DOC/app/index.html	(revision 89)
@@ -154,62 +154,62 @@
 of contents</span><span style="font-family: Thorndale;" lang="EN-GB"> <br>
 &nbsp; <o:p></o:p></span></p>
-<p style="margin-left: 36pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_1.0.html"><span style="" lang="EN-GB">1.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Introduction <o:p></o:p></span></p>
-<p style="margin-left: 36pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_2.0.html"><span style="" lang="EN-GB">2.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Basic
+<p style="margin-left: 36pt;"><span style="font-family: Thorndale;"><a href="chapter_1.0.html"><span style="" lang="EN-GB">1.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Introduction <o:p></o:p></span></p>
+<p style="margin-left: 36pt;"><span style="font-family: Thorndale;"><a href="chapter_2.0.html"><span style="" lang="EN-GB">2.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Basic
 techniques of the LES model and its parallelization <o:p></o:p></span></p>
-<p style="margin: 5pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.0.html"><span style="" lang="EN-GB">3.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Execution of
+<p style="margin: 5pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="chapter_3.0.html"><span style="" lang="EN-GB">3.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Execution of
 model runs<o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 0.0001pt 72pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.1.html"><span style="" lang="EN-GB">3.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Job control
+<p style="margin: 0cm 0cm 0.0001pt 72pt;"><span style="font-family: Thorndale;"><a href="chapter_3.1.html"><span style="" lang="EN-GB">3.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Job control
 with <span class="SpellE"><b>mrun</b></span> <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.2.html"><span style="" lang="EN-GB">3.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Example of a
+</span><span style="font-family: Thorndale;"><a href="chapter_3.2.html"><span style="" lang="EN-GB">3.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Example of a
 minimum configuration file <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.3.html"><span style="" lang="EN-GB">3.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB">
+</span><span style="font-family: Thorndale;"><a href="chapter_3.3.html"><span style="" lang="EN-GB">3.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB">
 Initialization and restart runs <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.4.html"><span style="" lang="EN-GB">3.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Input and
+</span><span style="font-family: Thorndale;"><a href="chapter_3.4.html"><span style="" lang="EN-GB">3.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Input and
 output files <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.5.html"><span style="" lang="EN-GB">3.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Programming
+</span><span style="font-family: Thorndale;"><a href="chapter_3.5.html"><span style="" lang="EN-GB">3.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Programming
 of user-defined code extensions <o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 0.0001pt 108pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.5.1.html"><span style="" lang="EN-GB">3.5.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Interfaces for
+<p style="margin: 0cm 0cm 0.0001pt 108pt;"><span style="font-family: Thorndale;"><a href="chapter_3.5.1.html"><span style="" lang="EN-GB">3.5.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Interfaces for
 user-defined&nbsp; code <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.5.2.html"><span style="" lang="EN-GB">3.5.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Definition of
+</span><span style="font-family: Thorndale;"><a href="chapter_3.5.2.html"><span style="" lang="EN-GB">3.5.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Definition of
 user-defined parameters <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.5.3.html"><span style="" lang="EN-GB">3.5.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Definition of
+</span><span style="font-family: Thorndale;"><a href="chapter_3.5.3.html"><span style="" lang="EN-GB">3.5.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Definition of
 <span class="SpellE">user-defined subdomains</span></span></p><p style="margin: 0cm 0cm 0.0001pt 108pt;"><span style="font-family: Thorndale;" lang="EN-GB"><span class="SpellE"></span> <a href="chapter_3.5.4.html">3.5.4</a> User-defined output quantities<br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.5.5.html"><span style="" lang="EN-GB">3.5.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Compiling and linking
+</span><span style="font-family: Thorndale;"><a href="chapter_3.5.5.html"><span style="" lang="EN-GB">3.5.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Compiling and linking
 user-defined code <o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 5pt 72pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.6.html"><span style="" lang="EN-GB">3.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Interactive mode and
+<p style="margin: 0cm 0cm 5pt 72pt;"><span style="font-family: Thorndale;"><a href="chapter_3.6.html"><span style="" lang="EN-GB">3.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Interactive mode and
 debugging <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_3.7.html"><span style="" lang="EN-GB">3.7</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Optional
+</span><span style="font-family: Thorndale;"></span><span style="font-family: Thorndale;" lang="EN-GB"><a href="chapter_3.7.html">3.7</a> Optional
 software packages<o:p></o:p></span></p>
-<p style="margin: 12pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.0.html"><span style="" lang="EN-GB">4.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Steering
+<p style="margin: 12pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="chapter_4.0.html"><span style="" lang="EN-GB">4.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Steering
 parameters <o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 0.0001pt 72pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html"><span style="" lang="EN-GB">4.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB">
+<p style="margin: 0cm 0cm 0.0001pt 72pt;"><span style="font-family: Thorndale;"><a href="chapter_4.1.html"><span style="" lang="EN-GB">4.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB">
 Initialization parameters <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.2.html"><span style="" lang="EN-GB">4.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Runtime
+</span><span style="font-family: Thorndale;"><a href="chapter_4.2.html"><span style="" lang="EN-GB">4.2</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Runtime
 parameters and package parameters <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.3.html"><span style="" lang="EN-GB">4.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> User-defined
+</span><span style="font-family: Thorndale;"><a href="chapter_4.3.html"><span style="" lang="EN-GB">4.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> User-defined
 parameters <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.4.html"><span style="" lang="EN-GB">4.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Example of a
+</span><span style="font-family: Thorndale;"><a href="chapter_4.4.html"><span style="" lang="EN-GB">4.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Example of a
 minimum parameter set <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.html"><span style="" lang="EN-GB">4.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Data analysis and
+</span><span style="font-family: Thorndale;"><a href="chapter_4.5.html"><span style="" lang="EN-GB">4.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Data analysis and
 visualization <o:p></o:p></span></p>
 
-<p style="margin: 0cm 0cm 0.0001pt 108pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.1.html"><span style="" lang="EN-GB">4.5.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> NetCDF data output<b></b><br>
+<p style="margin: 0cm 0cm 0.0001pt 108pt;"><span style="font-family: Thorndale;"><a href="chapter_4.5.1.html"><span style="" lang="EN-GB">4.5.1</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> NetCDF data output<b></b><br>
 <a href="chapter_4.5.2.html">4.5.2</a> </span><span style="font-family: Thorndale;" lang="EN-GB">Plots of
 vertical profiles with <b>profil</b></span><br>
-<span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.3.html"><span style="" lang="EN-GB">4.5.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of time
+<span style="font-family: Thorndale;"><a href="chapter_4.5.3.html"><span style="" lang="EN-GB">4.5.3</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of time
 series with <b>profil</b> <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.4.html"><span style="" lang="EN-GB">4.5.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of 2D
+</span><span style="font-family: Thorndale;"><a href="chapter_4.5.4.html"><span style="" lang="EN-GB">4.5.4</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of 2D
 cross sections with <b>iso2d</b> <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.5.html"><span style="" lang="EN-GB">4.5.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of 3D
+</span><span style="font-family: Thorndale;"><a href="chapter_4.5.5.html"><span style="" lang="EN-GB">4.5.5</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of 3D
 volume data with <b>AVS</b> <br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.6.html"><span style="" lang="EN-GB">4.5.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of
+</span><span style="font-family: Thorndale;"><a href="chapter_4.5.6.html"><span style="" lang="EN-GB">4.5.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of
 compressed 3D volume data with <b>AVS</b><br>
-</span><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.5.7.html"><span style="" lang="EN-GB">4.5.7</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of <span class="SpellE">isosurfaces</span>, 2D cross sections and particles
+</span><span style="font-family: Thorndale;"><a href="chapter_4.5.7.html"><span style="" lang="EN-GB">4.5.7</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Plots of <span class="SpellE">isosurfaces</span>, 2D cross sections and particles
 with <span class="SpellE"><b>dvrp</b></span><o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 5pt 72pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.6.html"><span style="" lang="EN-GB">4.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Listing of the steering
+<p style="margin: 0cm 0cm 5pt 72pt;"><span style="font-family: Thorndale;"><a href="chapter_4.6.html"><span style="" lang="EN-GB">4.6</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Listing of the steering
 parameters in alphabetical&nbsp; order<o:p></o:p></span></p>
-<p style="margin: 12pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_5.0.html"><span style="" lang="EN-GB">5.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Installation
+<p style="margin: 12pt 0cm 0.0001pt 36pt;"><span style="font-family: Thorndale;"><a href="chapter_5.0.html"><span style="" lang="EN-GB">5.0</span></a></span><span style="font-family: Thorndale;" lang="EN-GB"> Installation
 of the model <o:p></o:p></span></p>
-<p style="margin: 0cm 0cm 5.1pt 72pt;"><span style="font-family: Thorndale;"><a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_5.1.html">5.1</a>
+<p style="margin: 0cm 0cm 5.1pt 72pt;"><span style="font-family: Thorndale;"><a href="chapter_5.1.html">5.1</a>
 Installation of <span class="SpellE">new</span><span class="SpellE"></span> / other
 <span class="SpellE">versions, version update</span><o:p></o:p></span></p><font color="#000000">&nbsp;
