Ignore:
Timestamp:
Dec 9, 2020 1:08:08 PM (10 months ago)
Author:
gronemeier
Message:

add additional output paths to palm.iofiles and update configuration files accordingly

File:
1 edited

Legend:

Unmodified
Added
Removed
  • palm/trunk/SCRIPTS/.palm.config.imuk

    r3299 r4814  
    33#name of variable  value of variable (~ must not be used)
    44#----------------------------------------------------------------------------
    5 %base_data         ~/palm/current_version/JOBS
    6 %base_directory    $HOME/palm/current_version
    7 %fast_io_catalog   /localdata/<your user directory>
    8 %source_path       $HOME/palm/current_version/trunk/SOURCE
    9 %user_source_path  $base_directory/JOBS/$run_identifier/USER_CODE
    10 #
     5%base_directory      $HOME/palm/current_version
     6%base_data           ~/palm/current_version/JOBS
     7%source_path         $HOME/palm/current_version/trunk/SOURCE
     8%user_source_path    $base_directory/JOBS/$run_identifier/USER_CODE
     9%fast_io_catalog     /localdata/<your user directory>
     10%restart_data_path   $fast_io_catalog
     11%output_data_path    $base_data
     12%local_jobcatalog    $base_data/$run_identifier/LOG_FILES
     13
    1114%local_ip            130.75.105.<your pc's id>
    1215%local_username      <username>
     16
    1317%compiler_name       mpif90
    1418%compiler_name_ser   ifort
     
    1620%make_options        -j 4
    1721%compiler_options    -fpe0 -O3 -xHost -fp-model source -ftz -fno-alias -no-prec-div -no-prec-sqrt -ip -I /muksoft/packages/fftw/3.3.7/mvapich2-2.3rc1/gnu/include/ -I /muksoft/packages/netcdf4_hdf5parallel/4411c_443f/hdf5-1.10.0-patch1/mvapich2-2.3rc1/intel/2018.1.163/include/
    18 %linker_options      -fpe0 -O3 -xHost -fp-model source -ftz -fno-alias -no-prec-div -no-prec-sqrt -ip -L/muksoft/packages/fftw/3.3.7/mvapich2-2.3rc1/gnu/lib64/ -lfftw3 -L/muksoft/packages/netcdf4_hdf5parallel/4411c_443f/hdf5-1.10.0-patch1/mvapich2-2.3rc1/intel/2018.1.163/lib64/ -lnetcdf -lnetcdff
     22%linker_options      -L/muksoft/packages/fftw/3.3.7/mvapich2-2.3rc1/gnu/lib64/ -lfftw3 -L/muksoft/packages/netcdf4_hdf5parallel/4411c_443f/hdf5-1.10.0-patch1/mvapich2-2.3rc1/intel/2018.1.163/lib64/ -lnetcdf -lnetcdff
    1923%hostfile            auto
    2024%execute_command     mpiexec  -machinefile hostfile  -n {{mpi_tasks}}  palm
    21 #
     25
    2226#----------------------------------------------------------------------------
    23 # INPUT-commands, executed before running PALM - lines must start with "IC:" 
     27# INPUT-commands, executed before running PALM - lines must start with "IC:"
    2428#----------------------------------------------------------------------------
    2529IC:ulimit -s unlimited
    26 #
     30
    2731#----------------------------------------------------------------------------
    2832# ERROR-commands - executed when program terminates abnormally
     
    3034EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
    3135EC:[[ \$locat = execution ]]  &&  cat  PARTICLE_INFOS/*
    32 #
     36
    3337#----------------------------------------------------------------------------
    3438# OUTPUT-commands - executed when program terminates normally
    3539#----------------------------------------------------------------------------
    36 #
    3740# Combine 1D- and 3D-profile output (these files are not usable for plotting)
    3841OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
    3942OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
    40 #
     43
    4144# Combine all particle information files
    4245OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
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