Index: palm/trunk/SOURCE/palm.f90
===================================================================
--- palm/trunk/SOURCE/palm.f90	(revision 4039)
+++ palm/trunk/SOURCE/palm.f90	(revision 4180)
@@ -46,236 +46,4 @@
 ! Rename subroutines for surface-data output
 ! 
-! 3524 2018-11-14 13:36:44Z raasch
-! unused variable removed
-! 
-! 3494 2018-11-06 14:51:27Z suehring
-! Last actions for surface output added
-! 
-! 3487 2018-11-05 07:18:02Z maronga
-! Updates version to 6.0
-! 
-! 3484 2018-11-02 14:41:25Z hellstea
-! pmci_ensure_nest_mass_conservation removed permanently
-! 
-! 3458 2018-10-30 14:51:23Z kanani
-! from chemistry branch r3443, forkel:
-! removed double do_emis check around CALL chem_init
-! replaced call to calc_date_and_time to init_date_and_time
-! 
-! 3337 2018-10-12 15:17:09Z kanani
-! (from branch resler)
-! Fix chemistry call
-! 
-! 3298 2018-10-02 12:21:11Z kanani
-! - Minor formatting (kanani)
-! - Added Call of date_and_time_init (Russo)
-! - Added Call of calc_date_and_time before call of init_3d where emissions 
-!   are initialized:
-!   we have to know the time indices to initialize emission values (Russo)
-! - Added Call of netcdf_data_input_chemistry_data (Russo)
-!
-! 3274 2018-09-24 15:42:55Z knoop
-! Modularization of all bulk cloud physics code components
-! 
-! 3258 2018-09-18 07:23:31Z Giersch
-! current revision for user interface has been changed to 3240
-! 
-! 3241 2018-09-12 15:02:00Z raasch
-! unused variables removed
-! 
-! 3235 2018-09-07 14:06:15Z sward
-! Added mas_last_actions call and multi_agent_system_mod dependency
-! 
-! 3232 2018-09-07 12:21:44Z raasch
-! references to mrun replaced by palmrun, and updated
-! 
-! 3182 2018-07-27 13:36:03Z suehring
-! Deduct spinup_time from RUN_CONTROL output of main 3d run 
-! (use time_since_reference_point instead of simulated_time)
-! 
-! 2951 2018-04-06 09:05:08Z kanani
-! Add log_point_s for pmci_init
-! 
-! 2903 2018-03-16 08:17:06Z hellstea
-! Nesting-related calls to pmci_ensure_nest_mass_conservation and pres after
-! the nest initialization are removed as they may create unwanted initial
-! perturbation in some cases.
-! 
-! 2894 2018-03-15 09:17:58Z Giersch
-! Modified todo list, _write_restart_data/_last_actions has been renamed to 
-! _wrd_local, unit 14 will be opened now for each io_group
-! write_3d_binary is called wrd_local now, wrd_global moved from wrd_local to 
-! palm.f90, unit 14 is closed directly after the wrd_local call, Module related
-! routines for writing restart data have been moved to wrd_local
-! 
-! 2801 2018-02-14 16:01:55Z suehring
-! Changed lpm from subroutine to module.
-! Introduce particle transfer in nested models.
-! 
-! 2766 2018-01-22 17:17:47Z kanani
-! Removed preprocessor directive __chem
-! 
-! 2720 2018-01-02 16:27:15Z kanani
-! Version update to 5.0
-! 
-! 2718 2018-01-02 08:49:38Z maronga
-! Corrected "Former revisions" section
-! 
-! 2696 2017-12-14 17:12:51Z kanani
-! Change in file header (GPL part)
-! Implementation of chemistry module (FK)
-! Introduce input-data standard
-! Rename lsm_last_actions into lsm_write_restart_data
-! Move usm_write_restart_data into io_blocks loop (MS)
-! 
-! 2512 2017-10-04 08:26:59Z raasch
-! user interface required revision updated
-! 
-! 2320 2017-07-21 12:47:43Z suehring
-! Modularize large-scale forcing and nudging
-! 
-! 2298 2017-06-29 09:28:18Z raasch
-! type of write_binary changed from CHARACTER to LOGICAL,
-! user interface required revision updated, MPI2 related part removed
-! 
-! 2296 2017-06-28 07:53:56Z maronga
-! Added call to new spinup routine
-! 
-! 2292 2017-06-20 09:51:42Z schwenkel
-! Implementation of new microphysic scheme: cloud_scheme = 'morrison' 
-! includes two more prognostic equations for cloud drop concentration (nc)  
-! and cloud water content (qc). 
-! 
-! 2261 2017-06-08 14:25:57Z raasch
-! output of run number for mrun to create unified cycle numbers
-! 
-! 2233 2017-05-30 18:08:54Z suehring
-!
-! 2232 2017-05-30 17:47:52Z suehring
-! Renamed wall_flags_0 and wall_flags_00 into advc_flags_1 and advc_flags_2, 
-! respectively, within copyin statement. Moreover, introduced further flag 
-! array wall_flags_0. 
-! Remove unused variables from ONLY list.
-! 
-! 2178 2017-03-17 11:07:39Z hellstea
-! Calls for pmci_ensure_nest_mass_conservation and pres are added after
-! the nest initialization
-!
-! 2118 2017-01-17 16:38:49Z raasch
-! OpenACC directives and related code removed
-! 
-! 2011 2016-09-19 17:29:57Z kanani
-! Flag urban_surface is now defined in module control_parameters.
-! 
-! 2007 2016-08-24 15:47:17Z kanani
-! Temporarily added CALL for writing of restart data for urban surface model
-! 
-! 2000 2016-08-20 18:09:15Z knoop
-! Forced header and separation lines into 80 columns
-! 
-! 1976 2016-07-27 13:28:04Z maronga
-! Added call to radiation_last_actions for binary output of land surface model 
-! data
-! 
-! 1972 2016-07-26 07:52:02Z maronga
-! Added call to lsm_last_actions for binary output of land surface model data
-! 
-! 1960 2016-07-12 16:34:24Z suehring
-! Separate humidity and passive scalar
-! 
-! 1834 2016-04-07 14:34:20Z raasch
-! Initial version of purely vertical nesting introduced. 
-! 
-! 1833 2016-04-07 14:23:03Z raasch
-! required user interface version changed
-!
-! 1808 2016-04-05 19:44:00Z raasch
-! routine local_flush replaced by FORTRAN statement
-!
-! 1783 2016-03-06 18:36:17Z raasch
-! required user interface version changed
-!
-! 1781 2016-03-03 15:12:23Z raasch
-! pmc initialization moved from time_integration to here
-!
-! 1779 2016-03-03 08:01:28Z raasch
-! setting of nest_domain and coupling_char moved to the pmci
-!
-! 1764 2016-02-28 12:45:19Z raasch
-! cpp-statements for nesting removed, communicator settings cleaned up
-!
-! 1762 2016-02-25 12:31:13Z hellstea
-! Introduction of nested domain feature
-!
-! 1747 2016-02-08 12:25:53Z raasch
-! OpenACC-adjustment for new surface layer parameterization
-!
-! 1682 2015-10-07 23:56:08Z knoop
-! Code annotations made doxygen readable 
-!
-! 1668 2015-09-23 13:45:36Z raasch
-! warning replaced by abort in case of failed user interface check
-!
-! 1666 2015-09-23 07:31:10Z raasch
-! check for user's interface version added
-!
-! 1482 2014-10-18 12:34:45Z raasch
-! adjustments for using CUDA-aware OpenMPI
-!
-! 1468 2014-09-24 14:06:57Z maronga
-! Adapted for use on up to 6-digit processor cores
-! 
-! 1402 2014-05-09 14:25:13Z raasch
-! location messages added
-! 
-! 1374 2014-04-25 12:55:07Z raasch
-! bugfix: various modules added
-!
-! 1320 2014-03-20 08:40:49Z raasch
-! ONLY-attribute added to USE-statements,
-! kind-parameters added to all INTEGER and REAL declaration statements,
-! kinds are defined in new module kinds,
-! old module precision_kind is removed,
-! revision history before 2012 removed,
-! comment fields (!:) to be used for variable explanations added to
-! all variable declaration statements
-!
-! 1318 2014-03-17 13:35:16Z raasch
-! module interfaces removed
-!
-! 1241 2013-10-30 11:36:58Z heinze
-! initialization of nuding and large scale forcing from external file
-!
-! 1221 2013-09-10 08:59:13Z raasch
-! +wall_flags_00, rflags_invers, rflags_s_inner in copyin statement
-!
-! 1212 2013-08-15 08:46:27Z raasch
-! +tri in copyin statement
-!
-! 1179 2013-06-14 05:57:58Z raasch
-! ref_state added to copyin-list
-!
-! 1113 2013-03-10 02:48:14Z raasch
-! openACC statements modified
-!
-! 1111 2013-03-08 23:54:10Z raasch
-! openACC statements updated
-!
-! 1092 2013-02-02 11:24:22Z raasch
-! unused variables removed
-!
-! 1036 2012-10-22 13:43:42Z raasch
-! code put under GPL (PALM 3.9)
-!
-! 1015 2012-09-27 09:23:24Z raasch
-! Version number changed from 3.8 to 3.8a.
-! OpenACC statements added + code changes required for GPU optimization
-!
-! 849 2012-03-15 10:35:09Z raasch
-! write_particles renamed lpm_write_restart_file
-!
-! Revision 1.1  1997/07/24 11:23:35  raasch
-! Initial revision
-!
 !
 ! Description:
