Index: palm/trunk/SOURCE/chemistry_model_mod.f90
===================================================================
--- palm/trunk/SOURCE/chemistry_model_mod.f90	(revision 4167)
+++ palm/trunk/SOURCE/chemistry_model_mod.f90	(revision 4180)
@@ -159,182 +159,4 @@
 ! 
 ! 
-! 3646 2018-12-28 17:58:49Z kanani
-! Bugfix: use time_since_reference_point instead of simulated_time (relevant
-! when using wall/soil spinup)
-! 
-! 3643 2018-12-24 13:16:19Z knoop
-! Bugfix: set found logical correct in chem_data_output_2d
-! 
-! 3638 2018-12-20 13:18:23Z forkel
-! Added missing conversion factor fr2ppm for qvap
-! 
-! 
-! 3637 2018-12-20 01:51:36Z knoop
-! Implementation of the PALM module interface
-! 
-! 3636 2018-12-19 13:48:34Z raasch
-! nopointer option removed
-!
-! 3611 2018-12-07 14:14:11Z banzhafs
-! Minor formatting             
-!
-! 3600 2018-12-04 13:49:07Z banzhafs
-! Code update to comply PALM coding rules            
-! Bug fix in par_dir_diff subroutine                 
-! Small fixes (corrected 'conastant', added 'Unused') 
-!
-! 3586 2018-11-30 13:20:29Z dom_dwd_user
-! Changed character lenth of name in species_def and photols_def to 15
-!
-! 3570 2018-11-27 17:44:21Z kanani
-! resler:
-! Break lines at 132 characters
-!
-! 3543 2018-11-20 17:06:15Z suehring
-! Remove tabs
-!
-! 3542 2018-11-20 17:04:13Z suehring
-! working precision added to make code Fortran 2008 conform
-!
-! 3458 2018-10-30 14:51:23Z kanani
-! from chemistry branch r3443, banzhafs, basit:
-! replace surf_lsm_h%qv1(m) by q(k,j,i) for mixing ratio in chem_depo
-!
-! bug fix in chem_depo: allow different surface fractions for one
-! surface element and set lai to zero for non vegetated surfaces
-! bug fixed in chem_data_output_2d
-! bug fix in chem_depo subroutine
-! added code on deposition of gases and particles
-! removed cs_profile_name from chem_parin
-! bug fixed in output profiles and code cleaned
-! 
-! 3449 2018-10-29 19:36:56Z suehring
-! additional output - merged from branch resler
-! 
-! 3438 2018-10-28 19:31:42Z pavelkrc
-! Add terrain-following masked output
-! 
-! 3373 2018-10-18 15:25:56Z kanani
-! Remove MPI_Abort, replace by message
-!
-! 3318 2018-10-08 11:43:01Z sward
-! Fixed faulty syntax of message string
-! 
-! 3298 2018-10-02 12:21:11Z kanani
-! Add remarks (kanani)
-! Merge with trunk, replaced cloud_physics by bulk_cloud_model         28.09.2018 forkel
-! Subroutines header and chem_check_parameters added                   25.09.2018 basit
-! Removed chem_emission routine now declared in chem_emissions.f90     30.07.2018 ERUSSO
-! Introduced emissions namelist parameters                             30.07.2018 ERUSSO
-!
-! Timestep steering added in subroutine chem_integrate_ij and 
-! output of chosen solver in chem_parin added                          30.07.2018 ketelsen
-!
-! chem_check_data_output_pr: added unit for PM compounds               20.07.2018 forkel
-! replaced : by nzb+1:nzt for pt,q,ql (found by kk)                    18.07.2018 forkel
-! debugged restart run for chem species               06.07.2018 basit
-! reorganized subroutines in alphabetical order.      27.06.2018 basit
-! subroutine chem_parin updated for profile output    27.06.2018 basit
-! Added humidity arrays to USE section and tmp_qvap in chem_integrate  26.6.2018 forkel
-! Merged chemistry with with trunk (nzb_do and nzt_do in 3d output)    26.6.2018 forkel
-!
-! reorganized subroutines in alphabetical order.      basit 22.06.2018
-! subroutine chem_parin updated for profile output    basit 22.06.2018
-! subroutine chem_statistics added                  
-! subroutine chem_check_data_output_pr add            21.06.2018 basit
-! subroutine chem_data_output_mask added              20.05.2018 basit
-! subroutine chem_data_output_2d added                20.05.2018 basit
-! subroutine chem_statistics added                    04.06.2018 basit
-! subroutine chem_emissions: Set cssws to zero before setting values 20.03.2018 forkel
-! subroutine chem_emissions: Introduced different conversion factors 
-! for PM and gaseous compounds                                    15.03.2018 forkel
-! subroutine chem_emissions updated to take variable number of chem_spcs and
-! emission factors.                                               13.03.2018 basit
-! chem_boundary_conds_decycle improved.                           05.03.2018 basit
-! chem_boundary_conds_decycle subroutine added                    21.02.2018 basit
-! chem_init_profiles subroutines re-activated after correction    21.02.2018 basit
-! 
-! 
-! 3293 2018-09-28 12:45:20Z forkel
-! Modularization of all bulk cloud physics code components
-!
-! 3248 2018-09-14 09:42:06Z sward
-! Minor formating changes
-!
-! 3246 2018-09-13 15:14:50Z sward
-! Added error handling for input namelist via parin_fail_message
-!
-! 3241 2018-09-12 15:02:00Z raasch
-! +nest_chemistry
-! 
-! 3209 2018-08-27 16:58:37Z suehring
-! Rename flags indicating outflow boundary conditions
-! 
-! 3182 2018-07-27 13:36:03Z suehring
-! Revise output of surface quantities in case of overhanging structures
-! 
-! 3045 2018-05-28 07:55:41Z Giersch
-! error messages revised
-! 
-! 3014 2018-05-09 08:42:38Z maronga
-! Bugfix: nzb_do and nzt_do were not used for 3d data output
-! 
-! 3004 2018-04-27 12:33:25Z Giersch
-! Comment concerning averaged data output added 
-! 
-! 2932 2018-03-26 09:39:22Z maronga
-! renamed chemistry_par to chemistry_parameters
-! 
-! 2894 2018-03-15 09:17:58Z Giersch
-! Calculations of the index range of the subdomain on file which overlaps with
-! the current subdomain are already done in read_restart_data_mod,
-! chem_last_actions was renamed to chem_wrd_local, chem_read_restart_data was
-! renamed to chem_rrd_local, chem_write_var_list was renamed to 
-! chem_wrd_global, chem_read_var_list was renamed to chem_rrd_global, 
-! chem_skip_var_list has been removed, variable named found has been
-! introduced for checking if restart data was found, reading of restart strings
-! has been moved completely to read_restart_data_mod, chem_rrd_local is already
-! inside the overlap loop programmed in read_restart_data_mod, todo list has 
-! bees extended, redundant characters in chem_wrd_local have been removed, 
-! the marker *** end chemistry *** is not necessary anymore, strings and their 
-! respective lengths are written out and read now in case of restart runs to 
-! get rid of prescribed character lengths
-!
-! 2815 2018-02-19 11:29:57Z suehring
-! Bugfix in restart mechanism,
-! rename chem_tendency to chem_prognostic_equations,
-! implement vector-optimized version of chem_prognostic_equations,
-! some clean up (incl. todo list)
-! 
-! 2773 2018-01-30 14:12:54Z suehring
-! Declare variables required for nesting as public
-! 
-! 2772 2018-01-29 13:10:35Z suehring
-! Bugfix in string handling
-! 
-! 2768 2018-01-24 15:38:29Z kanani
-! Shorten lines to maximum length of 132 characters
-! 
-! 2766 2018-01-22 17:17:47Z kanani
-! Removed preprocessor directive __chem
-! 
-! 2756 2018-01-16 18:11:14Z suehring
-! Fill values in 3D output introduced.
-! 
-! 2718 2018-01-02 08:49:38Z maronga
-! Initial revision
-!
-! 
-!
-!
-! Authors:
-! --------
-! @author Renate Forkel
-! @author Farah Kanani-Suehring
-! @author Klaus Ketelsen
-! @author Basit Khan
-! @author Sabine Banzhaf
-!
-!
 !------------------------------------------------------------------------------!
 ! Description:
