[2696] | 1 | /****************************************************************************** |
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| 2 | |
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| 3 | KPP - The Kinetic PreProcessor |
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| 4 | Builds simulation code for chemical kinetic systems |
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| 5 | |
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[4843] | 6 | Copyright (C) -2021 996 Valeriu Damian and Adrian Sandu |
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| 7 | Copyright (C) -2021 005 Adrian Sandu |
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[2696] | 8 | |
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| 9 | KPP is free software; you can redistribute it and/or modify it under the |
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| 10 | terms of the GNU General Public License as published by the Free Software |
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| 11 | Foundation (http://www.gnu.org/copyleft/gpl.html); either version 2 of the |
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| 12 | License, or (at your option) any later version. |
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| 13 | |
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| 14 | KPP is distributed in the hope that it will be useful, but WITHOUT ANY |
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| 15 | WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS |
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| 16 | FOR A PARTICULAR PURPOSE. See the GNU General Public License for more |
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| 17 | details. |
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| 18 | |
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| 19 | You should have received a copy of the GNU General Public License along |
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| 20 | with this program; if not, consult http://www.gnu.org/copyleft/gpl.html or |
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| 21 | write to the Free Software Foundation, Inc., 59 Temple Place - Suite 330, |
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| 22 | Boston, MA 02111-1307, USA. |
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| 23 | |
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| 24 | Adrian Sandu |
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| 25 | Computer Science Department |
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| 26 | Virginia Polytechnic Institute and State University |
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| 27 | Blacksburg, VA 24060 |
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| 28 | E-mail: sandu@cs.vt.edu |
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| 29 | |
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| 30 | ******************************************************************************/ |
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| 31 | |
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| 32 | |
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| 33 | #include "gdata.h" |
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| 34 | #include "code.h" |
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| 35 | #include <string.h> |
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| 36 | #include <stdio.h> |
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| 37 | |
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| 38 | #define MAX_LINE 120 |
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| 39 | |
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| 40 | char *F77_types[] = { "", /* VOID */ |
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| 41 | "INTEGER", /* INT */ |
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| 42 | "REAL", /* FLOAT */ |
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| 43 | "REAL*8", /* DOUBLE */ |
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| 44 | "CHARACTER*12", /* STRING */ |
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| 45 | "CHARACTER*100" /* DOUBLESTRING */ |
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| 46 | }; |
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| 47 | |
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| 48 | /*************************************************************************************************/ |
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| 49 | void F77_WriteElm( NODE * n ) |
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| 50 | { |
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| 51 | ELEMENT *elm; |
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| 52 | char * name; |
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| 53 | char maxi[20]; |
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| 54 | char maxj[20]; |
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| 55 | |
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| 56 | elm = n->elm; |
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| 57 | name = varTable[ elm->var ]->name; |
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| 58 | |
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| 59 | switch( n->type ) { |
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| 60 | case CONST: bprintf("%g", elm->val.cnst); |
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| 61 | break; |
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| 62 | case ELM: bprintf("%s", name); |
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| 63 | break; |
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| 64 | case VELM: if( elm->val.idx.i >= 0 ) sprintf( maxi, "%d", elm->val.idx.i+1 ); |
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| 65 | else sprintf( maxi, "%s", varTable[ -elm->val.idx.i ]->name ); |
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| 66 | bprintf("%s(%s)", name, maxi ); |
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| 67 | break; |
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| 68 | case MELM: if( elm->val.idx.i >= 0 ) sprintf( maxi, "%d", elm->val.idx.i+1 ); |
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| 69 | else sprintf( maxi, "%s", varTable[ -elm->val.idx.i ]->name ); |
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| 70 | if( elm->val.idx.j >= 0 ) sprintf( maxj, "%d", elm->val.idx.j+1 ); |
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| 71 | else sprintf( maxj, "%s", varTable[ -elm->val.idx.j ]->name ); |
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| 72 | bprintf("%s(%s,%s)", name, maxi, maxj ); |
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| 73 | break; |
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| 74 | case EELM: bprintf("(%s)", elm->val.expr ); |
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| 75 | break; |
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| 76 | } |
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| 77 | } |
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| 78 | |
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| 79 | /*************************************************************************************************/ |
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| 80 | void F77_WriteSymbol( int op ) |
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| 81 | { |
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| 82 | switch( op ) { |
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| 83 | case ADD: bprintf("+"); |
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| 84 | AllowBreak(); |
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| 85 | break; |
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| 86 | case SUB: bprintf("-"); |
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| 87 | AllowBreak(); |
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| 88 | break; |
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| 89 | case MUL: bprintf("*"); |
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| 90 | AllowBreak(); |
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| 91 | break; |
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| 92 | case DIV: bprintf("/"); |
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| 93 | AllowBreak(); |
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| 94 | break; |
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| 95 | case POW: bprintf("power"); |
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| 96 | break; |
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| 97 | case O_PAREN: bprintf("("); |
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| 98 | AllowBreak(); |
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| 99 | break; |
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| 100 | case C_PAREN: bprintf(")"); |
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| 101 | break; |
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| 102 | case NONE: |
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| 103 | break; |
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| 104 | } |
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| 105 | } |
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| 106 | |
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| 107 | /*************************************************************************************************/ |
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| 108 | void F77_WriteAssign( char *ls, char *rs ) |
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| 109 | { |
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| 110 | int start; |
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| 111 | int linelg; |
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| 112 | int i,j; |
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| 113 | char c; |
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| 114 | int first; |
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| 115 | int crtident; |
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| 116 | int number_of_lines = 1, MAX_NO_OF_LINES = 36; |
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| 117 | int ifound, jfound; |
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| 118 | |
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| 119 | /* Operator Mapping: 0xaa = '*' | 0xab = '+' | 0xac = ',' |
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| 120 | 0xad = '-' | 0xae ='.' | 0xaf = '/' */ |
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| 121 | /* char op_mult=0xaa, op_plus=0xab, op_minus=0xad, op_dot=0xae, op_div=0xaf; */ |
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| 122 | char op_mult='*', op_plus='+', op_minus='-', op_dot='.', op_div='/'; |
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| 123 | |
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| 124 | crtident = 6 + ident * 2; |
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| 125 | bprintf("%*s%s = ", crtident, "", ls); |
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| 126 | start = strlen( ls ) + 2; |
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| 127 | linelg = 70 - crtident - start - 1; |
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| 128 | |
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| 129 | first = 1; |
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| 130 | while( strlen(rs) > linelg ) { |
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| 131 | ifound = 0; jfound = 0; |
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| 132 | if ( number_of_lines >= MAX_NO_OF_LINES ) {/* if a new line needs to be started */ |
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| 133 | for( j=linelg; j>5; j-- ) /* split row here if +, -, or comma */ |
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| 134 | if ( ( rs[j] == op_plus )||( rs[j] == op_minus )||( rs[j]==',' ) ) { |
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| 135 | jfound = 1; i=j; break; |
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| 136 | } |
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| 137 | } |
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| 138 | if ( ( number_of_lines < MAX_NO_OF_LINES )||( !jfound ) ) { |
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| 139 | for( i=linelg; i>10; i-- ) /* split row here if operator or comma */ |
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| 140 | if ( ( rs[i] & 0x80 )||( rs[i]==',' ) ) { |
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| 141 | ifound = 1; break; |
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| 142 | } |
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| 143 | if( i <= 10 ) { |
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| 144 | printf("\n Warning: possible error in continuation lines for %s = ...",ls); |
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| 145 | i = linelg; |
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| 146 | } |
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| 147 | } |
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| 148 | while ( rs[i-1] & 0x80 ) i--; /* put all operators on the next row */ |
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| 149 | while ( rs[i] == ',' ) i++; /* put commas on the current row */ |
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| 150 | |
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| 151 | /*for( i=linelg; i>10; i-- ) |
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| 152 | if( ( rs[i] & 0x80 )||( rs[i]==',' ) ) |
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| 153 | break; |
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| 154 | if( i < 10 ) { |
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| 155 | printf("\nPossible error when cutting lines"); |
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| 156 | i = linelg; |
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| 157 | } */ |
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| 158 | |
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| 159 | c = rs[i]; |
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| 160 | rs[i] = 0; |
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| 161 | |
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| 162 | if ( first ) { /* first line in a split row */ |
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| 163 | bprintf("%s", rs ); |
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| 164 | linelg++; |
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| 165 | first = 0; |
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| 166 | } else {/* continuation line in a split row - but not last line*/ |
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| 167 | bprintf("\n &%*s%s", start, "", rs ); |
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| 168 | if ( jfound ) { |
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| 169 | bprintf("\n%*s%s = %s", crtident, "", ls, ls); |
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| 170 | number_of_lines = 1; |
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| 171 | } |
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| 172 | } |
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| 173 | rs[i] = c; |
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| 174 | rs += i; |
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| 175 | number_of_lines++; |
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| 176 | } |
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| 177 | |
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| 178 | if ( number_of_lines > MAX_NO_OF_LINES ) |
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| 179 | printf("\n Warning: many continuation lines (%d) for %s = ...",number_of_lines,ls); |
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| 180 | |
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| 181 | if ( first ) bprintf("%s\n", rs ); /* non-split row */ |
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| 182 | else bprintf("\n &%*s%s\n", start, "", rs ); /* last line in a split row */ |
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| 183 | |
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| 184 | FlushBuf(); |
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| 185 | } |
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| 186 | |
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| 187 | |
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| 188 | /*************************************************************************************************/ |
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| 189 | void F77_WriteComment( char *fmt, ... ) |
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| 190 | { |
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| 191 | Va_list args; |
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| 192 | char buf[ MAX_LINE ]; |
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| 193 | |
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| 194 | Va_start( args, fmt ); |
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| 195 | vsprintf( buf, fmt, args ); |
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| 196 | va_end( args ); |
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| 197 | bprintf( "C %-65s\n", buf ); |
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| 198 | |
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| 199 | FlushBuf(); |
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| 200 | } |
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| 201 | |
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| 202 | /*************************************************************************************************/ |
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| 203 | char * F77_Decl( int v ) |
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| 204 | { |
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| 205 | static char buf[120]; |
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| 206 | VARIABLE *var; |
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| 207 | char *baseType; |
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| 208 | char maxi[20]; |
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| 209 | char maxj[20]; |
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| 210 | |
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| 211 | var = varTable[ v ]; |
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| 212 | baseType = F77_types[ var->baseType ]; |
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| 213 | |
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| 214 | *buf = 0; |
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| 215 | |
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| 216 | switch( var->type ) { |
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| 217 | case ELM: sprintf( buf, "%s %s", |
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| 218 | baseType, var->name ); |
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| 219 | break; |
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| 220 | case VELM: |
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| 221 | if( var->maxi > 0 ) sprintf( maxi, "%d", var->maxi ); |
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| 222 | if( var->maxi == 0 ) sprintf( maxi, "%d", 1 ); |
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| 223 | /* else sprintf( maxi, "%s", varTable[ -var->maxi ]->name); */ |
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| 224 | if ( var->maxi < 0 ) { |
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| 225 | if (varTable[ -var->maxi ]->value < 0) |
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| 226 | sprintf( maxi, "%s", varTable[ -var->maxi ]->name ); |
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| 227 | else |
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| 228 | sprintf( maxi, "%d", (varTable[-var->maxi]->value)==0? |
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| 229 | 1:varTable[-var->maxi]->value ); |
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| 230 | } |
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| 231 | /* if( (var->maxi == 0) || |
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| 232 | ((var->maxi < 0) && (varTable[ -var->maxi ]->maxi == 0)) ) |
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| 233 | strcat( maxi, "+1"); */ |
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| 234 | sprintf( buf, "%s %s(%s)", |
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| 235 | baseType, var->name, maxi ); |
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| 236 | break; |
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| 237 | case MELM: if( var->maxi > 0 ) sprintf( maxi, "%d", var->maxi ); |
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| 238 | else { |
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| 239 | if (varTable[ -var->maxi ]->value < 0) |
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| 240 | sprintf( maxi, "%s", varTable[ -var->maxi ]->name ); |
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| 241 | else |
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| 242 | sprintf( maxi, "%d", (varTable[-var->maxi]->value)==0? |
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| 243 | 1:varTable[-var->maxi]->value ); |
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| 244 | } |
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| 245 | /* if( (var->maxi == 0) || |
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| 246 | ((var->maxi < 0) && (varTable[ -var->maxi ]->maxi == 0)) ) |
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| 247 | strcat( maxi, "+1"); */ |
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| 248 | if( var->maxj > 0 ) sprintf( maxj, "%d", var->maxj ); |
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| 249 | else { |
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| 250 | if (varTable[ -var->maxj ]->value < 0) |
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| 251 | sprintf( maxj, "%s", varTable[ -var->maxj ]->name ); |
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| 252 | else |
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| 253 | sprintf( maxj, "%d", (varTable[-var->maxj]->value)==0? |
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| 254 | 1:varTable[-var->maxj]->value ); |
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| 255 | } |
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| 256 | /*if( (var->maxj == 0) || |
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| 257 | ((var->maxj < 0 ) && (varTable[ -var->maxj ]->maxi == 0)) ) |
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| 258 | strcat( maxj, "+1");*/ |
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| 259 | sprintf( buf, "%s %s(%s,%s)", |
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| 260 | baseType, var->name, maxi, maxj ); |
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| 261 | break; |
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| 262 | default: |
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| 263 | printf( "Can not declare type %d\n", var->type ); |
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| 264 | break; |
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| 265 | } |
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| 266 | return buf; |
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| 267 | } |
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| 268 | |
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| 269 | /*************************************************************************************************/ |
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| 270 | void F77_Declare( int v ) |
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| 271 | { |
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| 272 | if( varTable[ v ]->comment ) { |
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| 273 | F77_WriteComment( "%s - %s", |
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| 274 | varTable[ v ]->name, varTable[ v ]->comment ); |
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| 275 | } |
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| 276 | bprintf(" %s\n", F77_Decl(v) ); |
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| 277 | |
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| 278 | FlushBuf(); |
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| 279 | } |
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| 280 | |
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| 281 | /*************************************************************************************************/ |
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| 282 | void F77_ExternDeclare( int v ) |
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| 283 | { |
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| 284 | F77_Declare( v ); |
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| 285 | bprintf(" COMMON /%s/ %s\n", CommonName, varTable[ v ]->name ); |
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| 286 | } |
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| 287 | |
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| 288 | /*************************************************************************************************/ |
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| 289 | void F77_GlobalDeclare( int v ) |
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| 290 | { |
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| 291 | } |
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| 292 | |
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| 293 | /*************************************************************************************************/ |
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| 294 | void F77_DeclareConstant( int v, char *val ) |
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| 295 | { |
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| 296 | VARIABLE *var; |
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| 297 | int ival; |
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| 298 | char dummy_val[100]; /* used just to avoid strange behaviour of |
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| 299 | sscanf when compiled with gcc */ |
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| 300 | |
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| 301 | strcpy(dummy_val,val);val = dummy_val; |
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| 302 | |
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| 303 | var = varTable[ v ]; |
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| 304 | |
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| 305 | if( sscanf(val, "%d", &ival) == 1 ) |
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| 306 | if( ival == 0 ) var->maxi = 0; |
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| 307 | else var->maxi = 1; |
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| 308 | else |
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| 309 | var->maxi = -1; |
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| 310 | |
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| 311 | if( var->comment ) |
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| 312 | F77_WriteComment( "%s - %s", var->name, var->comment ); |
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| 313 | |
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| 314 | switch( var->type ) { |
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| 315 | case CONST: bprintf(" %s %s\n", |
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| 316 | F77_types[ var->baseType ], var->name ); |
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| 317 | bprintf(" PARAMETER ( %s = %s )\n", |
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| 318 | var->name, val); |
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| 319 | break; |
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| 320 | default: |
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| 321 | printf( "Invalid constant %d", var->type ); |
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| 322 | break; |
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| 323 | } |
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| 324 | |
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| 325 | FlushBuf(); |
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| 326 | } |
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| 327 | |
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| 328 | /*************************************************************************************************/ |
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| 329 | void WriteVecData( VARIABLE * var, int min, int max, int split ) |
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| 330 | { |
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| 331 | char buf[80]; |
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| 332 | char *p; |
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| 333 | |
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| 334 | if( split ) |
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| 335 | sprintf( buf, "%6sDATA( %s(i), i = %d, %d ) /\n%5s*", |
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| 336 | " ", var->name, min, max, " " ); |
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| 337 | else |
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| 338 | sprintf( buf, "%6sDATA %s /\n%5s*", |
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| 339 | " ", var->name, " " ); |
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| 340 | |
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| 341 | FlushThisBuf( buf ); |
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| 342 | bprintf( " / \n\n" ); |
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| 343 | FlushBuf(); |
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| 344 | } |
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| 345 | |
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| 346 | /*************************************************************************************************/ |
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| 347 | void F77_DeclareData( int v, int * values, int n ) |
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| 348 | { |
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| 349 | int i, j; |
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| 350 | int nlines, min, max; |
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| 351 | int split; |
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| 352 | VARIABLE *var; |
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| 353 | int * ival; |
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| 354 | double * dval; |
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| 355 | char **cval; |
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| 356 | int maxCols = MAX_COLS; |
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| 357 | char dsbuf[55]; |
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| 358 | |
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| 359 | var = varTable[ v ]; |
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| 360 | ival = (int*) values; |
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| 361 | dval = (double*) values; |
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| 362 | cval = (char**) values; |
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| 363 | |
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| 364 | nlines = 1; |
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| 365 | min = max = 1; |
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| 366 | split = 0; |
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| 367 | |
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| 368 | switch( var->type ) { |
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| 369 | case VELM: if( n <= 0 ) break; |
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| 370 | for( i = 0; i < n; i++ ) { |
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| 371 | switch( var->baseType ) { |
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| 372 | case INT: bprintf( "%3d", ival[i] ); maxCols=12; break; |
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| 373 | case DOUBLE: |
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| 374 | case REAL:bprintf( "%5lg", dval[i] ); maxCols=8; break; |
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| 375 | case STRING:bprintf( "'%s'", cval[i] ); maxCols=5; break; |
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| 376 | case DOUBLESTRING: |
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| 377 | strncpy( dsbuf, cval[i], 54 ); dsbuf[54]='\0'; |
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| 378 | bprintf( "'%48s'", dsbuf ); maxCols=1; break; |
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| 379 | } |
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| 380 | if( ( (i+1) % 12 == 0 ) && ( nlines > MAX_LINES ) ) { |
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| 381 | split = 1; nlines = 1; |
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| 382 | WriteVecData( var, min, max, split ); |
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| 383 | min = max + 1; |
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| 384 | } |
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| 385 | else { |
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| 386 | if( i < n-1 ) bprintf( "," ); |
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| 387 | if( (i+1) % maxCols == 0 ) { |
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| 388 | bprintf( "\n%5s*", " " ); |
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| 389 | nlines++; |
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| 390 | } |
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| 391 | } |
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| 392 | max ++; |
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| 393 | } |
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| 394 | WriteVecData( var, min, max-1, split ); |
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| 395 | break; |
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| 396 | |
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| 397 | case ELM: bprintf( "%6sDATA %s / ", " ", var->name ); |
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| 398 | switch( var->baseType ) { |
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| 399 | case INT: bprintf( "%d", *ival ); break; |
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| 400 | case DOUBLE: |
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| 401 | case REAL:bprintf( "%lg", *dval ); break; |
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| 402 | case STRING:bprintf( "'%s'", *cval ); break; |
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| 403 | case DOUBLESTRING: |
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| 404 | strncpy( dsbuf, *cval, 54 ); dsbuf[54]='\0'; |
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| 405 | bprintf( "'%s'", dsbuf ); maxCols=1; break; |
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| 406 | /* bprintf( "'%50s'", *cval ); break; */ |
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| 407 | } |
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| 408 | bprintf( " / \n" ); |
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| 409 | FlushBuf(); |
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| 410 | break; |
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| 411 | default: |
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| 412 | printf( "\n Function not defined !\n" ); |
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| 413 | break; |
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| 414 | } |
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| 415 | } |
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| 416 | |
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| 417 | /*************************************************************************************************/ |
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| 418 | void F77_InitDeclare( int v, int n, void * values ) |
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| 419 | { |
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| 420 | int i; |
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| 421 | VARIABLE * var; |
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| 422 | |
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| 423 | var = varTable[ v ]; |
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| 424 | var->maxi = max( n, 1 ); |
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| 425 | |
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| 426 | NewLines(1); |
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| 427 | F77_DeclareData( v, values, n ); |
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| 428 | } |
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| 429 | |
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| 430 | /*************************************************************************************************/ |
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| 431 | void F77_FunctionStart( int f, int *vars ) |
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| 432 | { |
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| 433 | int i; |
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| 434 | int v; |
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| 435 | char * name; |
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| 436 | int narg; |
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| 437 | |
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| 438 | name = varTable[ f ]->name; |
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| 439 | narg = varTable[ f ]->maxi; |
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| 440 | |
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| 441 | bprintf(" SUBROUTINE %s ( ", name ); |
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| 442 | for( i = 0; i < narg-1; i++ ) { |
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| 443 | v = vars[ i ]; |
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| 444 | bprintf("%s, ", varTable[ v ]->name ); |
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| 445 | } |
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| 446 | if( narg >= 1 ) { |
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| 447 | v = vars[ narg-1 ]; |
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| 448 | bprintf("%s ", varTable[ v ]->name ); |
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| 449 | } |
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| 450 | bprintf(")\n"); |
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| 451 | |
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| 452 | FlushBuf(); |
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| 453 | } |
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| 454 | |
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| 455 | /*************************************************************************************************/ |
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| 456 | void F77_FunctionPrototipe( int f, ... ) |
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| 457 | { |
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| 458 | char * name; |
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| 459 | int narg; |
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| 460 | |
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| 461 | name = varTable[ f ]->name; |
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| 462 | narg = varTable[ f ]->maxi; |
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| 463 | |
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| 464 | bprintf(" EXTERNAL %s\n", name ); |
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| 465 | |
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| 466 | FlushBuf(); |
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| 467 | } |
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| 468 | |
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| 469 | /*************************************************************************************************/ |
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| 470 | void F77_FunctionBegin( int f, ... ) |
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| 471 | { |
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| 472 | Va_list args; |
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| 473 | int i; |
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| 474 | int v; |
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| 475 | int vars[20]; |
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| 476 | char * name; |
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| 477 | int narg; |
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| 478 | FILE *oldf; |
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| 479 | |
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| 480 | name = varTable[ f ]->name; |
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| 481 | narg = varTable[ f ]->maxi; |
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| 482 | |
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| 483 | Va_start( args, f ); |
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| 484 | for( i = 0; i < narg; i++ ) |
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| 485 | vars[ i ] = va_arg( args, int ); |
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| 486 | va_end( args ); |
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| 487 | |
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| 488 | CommentFncBegin( f, vars ); |
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| 489 | F77_FunctionStart( f, vars ); |
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| 490 | NewLines(1); |
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| 491 | bprintf(" IMPLICIT NONE\n" ); |
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| 492 | bprintf(" INCLUDE '%s_Parameters.h'\n\n", rootFileName ); |
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| 493 | |
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| 494 | FlushBuf(); |
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| 495 | |
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| 496 | for( i = 0; i < narg; i++ ) |
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| 497 | F77_Declare( vars[ i ] ); |
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| 498 | |
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| 499 | bprintf("\n"); |
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| 500 | FlushBuf(); |
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| 501 | |
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| 502 | MapFunctionComment( f, vars ); |
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| 503 | } |
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| 504 | |
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| 505 | /*************************************************************************************************/ |
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| 506 | void F77_FunctionEnd( int f ) |
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| 507 | { |
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| 508 | bprintf(" RETURN\n"); |
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| 509 | bprintf(" END\n\n"); |
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| 510 | |
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| 511 | FlushBuf(); |
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| 512 | |
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| 513 | CommentFunctionEnd( f ); |
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| 514 | } |
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| 515 | |
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| 516 | /*************************************************************************************************/ |
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| 517 | void F77_Inline( char *fmt, ... ) |
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| 518 | { |
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| 519 | Va_list args; |
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| 520 | char buf[ 1000 ]; |
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| 521 | |
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| 522 | if( useLang != F77_LANG ) return; |
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| 523 | |
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| 524 | Va_start( args, fmt ); |
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| 525 | vsprintf( buf, fmt, args ); |
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| 526 | va_end( args ); |
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| 527 | bprintf( "%s\n", buf ); |
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| 528 | |
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| 529 | FlushBuf(); |
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| 530 | } |
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| 531 | |
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| 532 | /*************************************************************************************************/ |
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| 533 | void Use_F() |
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| 534 | { |
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| 535 | WriteElm = F77_WriteElm; |
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| 536 | WriteSymbol = F77_WriteSymbol; |
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| 537 | WriteAssign = F77_WriteAssign; |
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| 538 | WriteComment = F77_WriteComment; |
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| 539 | DeclareConstant = F77_DeclareConstant; |
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| 540 | Declare = F77_Declare; |
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| 541 | ExternDeclare = F77_ExternDeclare; |
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| 542 | GlobalDeclare = F77_GlobalDeclare; |
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| 543 | InitDeclare = F77_InitDeclare; |
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| 544 | |
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| 545 | FunctionStart = F77_FunctionStart; |
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| 546 | FunctionPrototipe = F77_FunctionPrototipe; |
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| 547 | FunctionBegin = F77_FunctionBegin; |
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| 548 | FunctionEnd = F77_FunctionEnd; |
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| 549 | |
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| 550 | OpenFile( ¶m_headerFile, rootFileName, "_Parameters.h", "Parameter Header File" ); |
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| 551 | OpenFile( &initFile, rootFileName, "_Initialize.f", "Initialization File" ); |
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| 552 | OpenFile( &driverFile, rootFileName, "_Main.f", "Main Program File" ); |
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| 553 | OpenFile( &integratorFile, rootFileName, "_Integrator.f", |
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| 554 | "Numerical Integrator (Time-Stepping) File" ); |
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| 555 | OpenFile( &linalgFile, rootFileName, "_LinearAlgebra.f", |
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| 556 | "Linear Algebra Data and Routines File" ); |
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| 557 | OpenFile( &functionFile, rootFileName, "_Function.f", |
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| 558 | "The ODE Function of Chemical Model File" ); |
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| 559 | OpenFile( &jacobianFile, rootFileName, "_Jacobian.f", |
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| 560 | "The ODE Jacobian of Chemical Model File" ); |
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| 561 | OpenFile( &rateFile, rootFileName, "_Rates.f", |
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| 562 | "The Reaction Rates File" ); |
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| 563 | if ( useStochastic ) |
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| 564 | OpenFile( &stochasticFile, rootFileName, "_Stochastic.f", |
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| 565 | "The Stochastic Chemical Model File" ); |
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| 566 | if ( useStoicmat ) { |
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| 567 | OpenFile( &stoichiomFile, rootFileName, "_Stoichiom.f", |
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| 568 | "The Stoichiometric Chemical Model File" ); |
---|
| 569 | OpenFile( &sparse_stoicmFile, rootFileName, "_StoichiomSP.f", |
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| 570 | "Sparse Stoichiometric Data Structures File" ); |
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| 571 | } |
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| 572 | OpenFile( &utilFile, rootFileName, "_Util.f", |
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| 573 | "Auxiliary Routines File" ); |
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| 574 | OpenFile( &sparse_dataFile, rootFileName, "_Sparse.h", "Sparse Data Header File" ); |
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| 575 | OpenFile( &global_dataFile, rootFileName, "_Global.h", "Global Data Header File" ); |
---|
| 576 | if ( useJacSparse ) { |
---|
| 577 | OpenFile( &sparse_jacFile, rootFileName, "_JacobianSP.f", |
---|
| 578 | "Sparse Jacobian Data Structures File" ); |
---|
| 579 | } |
---|
| 580 | if ( useHessian ) { |
---|
| 581 | OpenFile( &hessianFile, rootFileName, "_Hessian.f", "Hessian File" ); |
---|
| 582 | OpenFile( &sparse_hessFile, rootFileName, "_HessianSP.f", |
---|
| 583 | "Sparse Hessian Data Structures File" ); |
---|
| 584 | } |
---|
| 585 | OpenFile( &mapFile, rootFileName, ".map", |
---|
| 586 | "Map File with Human-Readable Information" ); |
---|
| 587 | OpenFile( &monitorFile, rootFileName, "_Monitor.f", |
---|
| 588 | "Initialization of Utility Data Structures" ); |
---|
| 589 | } |
---|