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source: palm/trunk/SOURCE/prognostic_equations.f90 @ 3837

Last change on this file since 3837 was 3837, checked in by knoop, 5 years ago
Added module_interface for prognostic_equations
Property svn:keywords set to `Id`
File size: 105.3 KB

Rev	Line
[1873]	1	!> @file prognostic_equations.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1875]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1875]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[3655]	17	! Copyright 1997-2019 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1875]	19	!
	20	! Current revisions:
	21	! ------------------
[2156]	22	!
[3589]	23	!
[1875]	24	! Former revisions:
	25	! -----------------
	26	! $Id: prognostic_equations.f90 3837 2019-03-28 16:55:58Z knoop $
[3833]	27	! added USE chem_gasphase_mod for nvar, nspec and spc_names
	28	!
	29	! 3820 2019-03-27 11:53:41Z forkel
[3820]	30	! renamed do_depo to deposition_dry (ecc)
	31	!
	32	! 3797 2019-03-15 11:15:38Z forkel
[3797]	33	! Call chem_integegrate in OpenMP loop (ketelsen)
	34	!
	35	!
	36	! 3771 2019-02-28 12:19:33Z raasch
[3771]	37	! preprocessor directivs fro rrtmg added
	38	!
	39	! 3761 2019-02-25 15:31:42Z raasch
[3761]	40	! unused variable removed
	41	!
	42	! 3719 2019-02-06 13:10:18Z kanani
[3719]	43	! Cleaned up chemistry cpu measurements
	44	!
	45	! 3684 2019-01-20 20:20:58Z knoop
[3634]	46	! OpenACC port for SPEC
	47	!
	48	! 3589 2018-11-30 15:09:51Z suehring
[3589]	49	! Move the control parameter "salsa" from salsa_mod to control_parameters
	50	! (M. Kurppa)
	51	!
	52	! 3582 2018-11-29 19:16:36Z suehring
[3467]	53	! Implementation of a new aerosol module salsa.
	54	! Remove cpu-logs from i,j loop in cache version.
	55	!
	56	! 3458 2018-10-30 14:51:23Z kanani
[3458]	57	! remove duplicate USE chem_modules
	58	! from chemistry branch r3443, banzhafs, basit:
	59	! chem_depo call introduced
	60	! code added for decycling chemistry
	61	!
	62	! 3386 2018-10-19 16:28:22Z gronemeier
[3386]	63	! Renamed tcm_prognostic to tcm_prognostic_equations
	64	!
	65	! 3355 2018-10-16 14:03:34Z knoop
[3337]	66	! (from branch resler)
	67	! Fix for chemistry call
	68	!
	69	! 3302 2018-10-03 02:39:40Z raasch
[3302]	70	! Stokes drift + wave breaking term added
	71	!
	72	! 3298 2018-10-02 12:21:11Z kanani
[3298]	73	! Code added for decycling chemistry (basit)
	74	!
	75	! 3294 2018-10-01 02:37:10Z raasch
[3294]	76	! changes concerning modularization of ocean option
	77	!
	78	! 3274 2018-09-24 15:42:55Z knoop
[3274]	79	! Modularization of all bulk cloud physics code components
	80	!
	81	! 3241 2018-09-12 15:02:00Z raasch
[3241]	82	! omp_get_thread_num now declared in omp directive
	83	!
	84	! 3183 2018-07-27 14:25:55Z suehring
[3183]	85	! Remove unused variables from USE statements
	86	!
	87	! 3182 2018-07-27 13:36:03Z suehring
[3022]	88	! Revise recent bugfix for nesting
	89	!
	90	! 3021 2018-05-16 08:14:20Z maronga
[3021]	91	! Bugfix in IF clause for nesting
	92	!
	93	! 3014 2018-05-09 08:42:38Z maronga
[3014]	94	! Fixed a bug in the IF condition to call pcm_tendency in case of
	95	! potential temperature
	96	!
	97	! 2815 2018-02-19 11:29:57Z kanani
[2815]	98	! Rename chem_tendency to chem_prognostic_equations,
	99	! implement vector version for air chemistry
	100	!
	101	! 2766 2018-01-22 17:17:47Z kanani
[2766]	102	! Removed preprocessor directive __chem
	103	!
	104	! 2746 2018-01-15 12:06:04Z suehring
[2746]	105	! Move flag plant canopy to modules
	106	!
	107	! 2719 2018-01-02 09:02:06Z maronga
[2719]	108	! Bugfix for last change.
	109	!
	110	! 2718 2018-01-02 08:49:38Z maronga
[2716]	111	! Corrected "Former revisions" section
	112	!
	113	! 2696 2017-12-14 17:12:51Z kanani
	114	! - Change in file header (GPL part)
[2696]	115	! - Moved TKE equation to tcm_prognostic (TG)
	116	! - Added switch for chemical reactions (RF, FK)
	117	! - Implementation of chemistry module (RF, BK, FK)
	118	!
	119	! 2563 2017-10-19 15:36:10Z Giersch
[2563]	120	! Variable wind_turbine moved to module control_parameters
	121	!
	122	! 2320 2017-07-21 12:47:43Z suehring
[2320]	123	! Modularize large-scale forcing and nudging
	124	!
	125	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	126	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	127	! includes two more prognostic equations for cloud drop concentration (nc)
	128	! and cloud water content (qc).
	129	!
	130	! 2261 2017-06-08 14:25:57Z raasch
[2261]	131	! bugfix for r2232: openmp directives removed
	132	!
	133	! 2233 2017-05-30 18:08:54Z suehring
[1875]	134	!
[2233]	135	! 2232 2017-05-30 17:47:52Z suehring
	136	! Adjutst to new surface-type structure. Remove call for usm_wall_heat_flux,
	137	! which is realized directly in diffusion_s now.
	138	!
[2193]	139	! 2192 2017-03-22 04:14:10Z raasch
	140	! Bugfix for misplaced and missing openMP directives from r2155
	141	!
[2156]	142	! 2155 2017-02-21 09:57:40Z hoffmann
	143	! Bugfix in the calculation of microphysical quantities on ghost points.
	144	!
[2119]	145	! 2118 2017-01-17 16:38:49Z raasch
	146	! OpenACC version of subroutine removed
[2155]	147	!
[2032]	148	! 2031 2016-10-21 15:11:58Z knoop
	149	! renamed variable rho to rho_ocean
[2155]	150	!
[2012]	151	! 2011 2016-09-19 17:29:57Z kanani
	152	! Flag urban_surface is now defined in module control_parameters.
[2155]	153	!
[2008]	154	! 2007 2016-08-24 15:47:17Z kanani
	155	! Added pt tendency calculation based on energy balance at urban surfaces
	156	! (new urban surface model)
[2155]	157	!
[2001]	158	! 2000 2016-08-20 18:09:15Z knoop
	159	! Forced header and separation lines into 80 columns
[2155]	160	!
[1977]	161	! 1976 2016-07-27 13:28:04Z maronga
	162	! Simplied calls to radiation model
[2155]	163	!
[1961]	164	! 1960 2016-07-12 16:34:24Z suehring
	165	! Separate humidity and passive scalar
[2155]	166	!
[1917]	167	! 1914 2016-05-26 14:44:07Z witha
	168	! Added calls for wind turbine model
	169	!
[1874]	170	! 1873 2016-04-18 14:50:06Z maronga
	171	! Module renamed (removed _mod)
[2155]	172	!
[1851]	173	! 1850 2016-04-08 13:29:27Z maronga
	174	! Module renamed
[2155]	175	!
[1827]	176	! 1826 2016-04-07 12:01:39Z maronga
[1875]	177	! Renamed canopy model calls.
[2155]	178	!
[1875]	179	! 1822 2016-04-07 07:49:42Z hoffmann
	180	! Kessler microphysics scheme moved to microphysics.
	181	!
	182	! 1757 2016-02-22 15:49:32Z maronga
[2155]	183	!
[1875]	184	! 1691 2015-10-26 16:17:44Z maronga
	185	! Added optional model spin-up without radiation / land surface model calls.
	186	! Formatting corrections.
[2155]	187	!
[1875]	188	! 1682 2015-10-07 23:56:08Z knoop
[2155]	189	! Code annotations made doxygen readable
	190	!
[1875]	191	! 1585 2015-04-30 07:05:52Z maronga
	192	! Added call for temperature tendency calculation due to radiative flux divergence
[2155]	193	!
[1875]	194	! 1517 2015-01-07 19:12:25Z hoffmann
	195	! advec_s_bc_mod addded, since advec_s_bc is now a module
	196	!
	197	! 1484 2014-10-21 10:53:05Z kanani
	198	! Changes due to new module structure of the plant canopy model:
[2696]	199	! parameters cthf and plant_canopy moved to module plant_canopy_model_mod.
[1875]	200	! Removed double-listing of use_upstream_for_tke in ONLY-list of module
	201	! control_parameters
[2155]	202	!
[1875]	203	! 1409 2014-05-23 12:11:32Z suehring
[2155]	204	! Bugfix: i_omp_start changed for advec_u_ws at left inflow and outflow boundary.
[1875]	205	! This ensures that left-hand side fluxes are also calculated for nxl in that
[2155]	206	! case, even though the solution at nxl is overwritten in boundary_conds()
	207	!
[1875]	208	! 1398 2014-05-07 11:15:00Z heinze
	209	! Rayleigh-damping for horizontal velocity components changed: instead of damping
[2155]	210	! against ug and vg, damping against u_init and v_init is used to allow for a
[1875]	211	! homogenized treatment in case of nudging
[2155]	212	!
[1875]	213	! 1380 2014-04-28 12:40:45Z heinze
[2155]	214	! Change order of calls for scalar prognostic quantities:
	215	! ls_advec -> nudging -> subsidence since initial profiles
	216	!
[1875]	217	! 1374 2014-04-25 12:55:07Z raasch
	218	! missing variables added to ONLY lists
[2155]	219	!
[1875]	220	! 1365 2014-04-22 15:03:56Z boeske
[2155]	221	! Calls of ls_advec for large scale advection added,
[1875]	222	! subroutine subsidence is only called if use_subsidence_tendencies = .F.,
	223	! new argument ls_index added to the calls of subsidence
	224	! +ls_index
[2155]	225	!
[1875]	226	! 1361 2014-04-16 15:17:48Z hoffmann
	227	! Two-moment microphysics moved to the start of prognostic equations. This makes
	228	! the 3d arrays for tend_q, tend_qr, tend_pt and tend_pt redundant.
	229	! Additionally, it is allowed to call the microphysics just once during the time
	230	! step (not at each sub-time step).
	231	!
	232	! Two-moment cloud physics added for vector and accelerator optimization.
[2155]	233	!
[1875]	234	! 1353 2014-04-08 15:21:23Z heinze
	235	! REAL constants provided with KIND-attribute
[2155]	236	!
[1875]	237	! 1337 2014-03-25 15:11:48Z heinze
	238	! Bugfix: REAL constants provided with KIND-attribute
[2155]	239	!
[1875]	240	! 1332 2014-03-25 11:59:43Z suehring
[2155]	241	! Bugfix: call advec_ws or advec_pw for TKE only if NOT use_upstream_for_tke
	242	!
[1875]	243	! 1330 2014-03-24 17:29:32Z suehring
[2155]	244	! In case of SGS-particle velocity advection of TKE is also allowed with
[1875]	245	! dissipative 5th-order scheme.
	246	!
	247	! 1320 2014-03-20 08:40:49Z raasch
	248	! ONLY-attribute added to USE-statements,
	249	! kind-parameters added to all INTEGER and REAL declaration statements,
	250	! kinds are defined in new module kinds,
	251	! old module precision_kind is removed,
	252	! revision history before 2012 removed,
	253	! comment fields (!:) to be used for variable explanations added to
	254	! all variable declaration statements
	255	!
	256	! 1318 2014-03-17 13:35:16Z raasch
	257	! module interfaces removed
	258	!
	259	! 1257 2013-11-08 15:18:40Z raasch
	260	! openacc loop vector clauses removed, independent clauses added
	261	!
	262	! 1246 2013-11-01 08:59:45Z heinze
	263	! enable nudging also for accelerator version
	264	!
	265	! 1241 2013-10-30 11:36:58Z heinze
	266	! usage of nudging enabled (so far not implemented for accelerator version)
	267	!
	268	! 1179 2013-06-14 05:57:58Z raasch
	269	! two arguments removed from routine buoyancy, ref_state updated on device
	270	!
	271	! 1128 2013-04-12 06:19:32Z raasch
	272	! those parts requiring global communication moved to time_integration,
	273	! loop index bounds in accelerator version replaced by i_left, i_right, j_south,
	274	! j_north
	275	!
	276	! 1115 2013-03-26 18:16:16Z hoffmann
[2155]	277	! optimized cloud physics: calculation of microphysical tendencies transfered
[1875]	278	! to microphysics.f90; qr and nr are only calculated if precipitation is required
	279	!
	280	! 1111 2013-03-08 23:54:10Z raasch
	281	! update directives for prognostic quantities removed
	282	!
	283	! 1106 2013-03-04 05:31:38Z raasch
	284	! small changes in code formatting
	285	!
	286	! 1092 2013-02-02 11:24:22Z raasch
	287	! unused variables removed
	288	!
	289	! 1053 2012-11-13 17:11:03Z hoffmann
	290	! implementation of two new prognostic equations for rain drop concentration (nr)
	291	! and rain water content (qr)
	292	!
	293	! currently, only available for cache loop optimization
	294	!
	295	! 1036 2012-10-22 13:43:42Z raasch
	296	! code put under GPL (PALM 3.9)
	297	!
	298	! 1019 2012-09-28 06:46:45Z raasch
	299	! non-optimized version of prognostic_equations removed
	300	!
	301	! 1015 2012-09-27 09:23:24Z raasch
	302	! new branch prognostic_equations_acc
	303	! OpenACC statements added + code changes required for GPU optimization
	304	!
	305	! 1001 2012-09-13 14:08:46Z raasch
	306	! all actions concerning leapfrog- and upstream-spline-scheme removed
	307	!
	308	! 978 2012-08-09 08:28:32Z fricke
	309	! km_damp_x and km_damp_y removed in calls of diffusion_u and diffusion_v
	310	! add ptdf_x, ptdf_y for damping the potential temperature at the inflow
	311	! boundary in case of non-cyclic lateral boundaries
	312	! Bugfix: first thread index changes for WS-scheme at the inflow
	313	!
	314	! 940 2012-07-09 14:31:00Z raasch
	315	! temperature equation can be switched off
	316	!
	317	! Revision 1.1 2000/04/13 14:56:27 schroeter
	318	! Initial revision
	319	!
	320	!
	321	! Description:
	322	! ------------
	323	!> Solving the prognostic equations.
	324	!------------------------------------------------------------------------------!
	325	MODULE prognostic_equations_mod
	326
	327
[3294]	328	USE advec_s_bc_mod, &
	329	ONLY: advec_s_bc
[2155]	330
[3294]	331	USE advec_s_pw_mod, &
	332	ONLY: advec_s_pw
	333
	334	USE advec_s_up_mod, &
	335	ONLY: advec_s_up
	336
	337	USE advec_u_pw_mod, &
	338	ONLY: advec_u_pw
	339
	340	USE advec_u_up_mod, &
	341	ONLY: advec_u_up
	342
	343	USE advec_v_pw_mod, &
	344	ONLY: advec_v_pw
	345
	346	USE advec_v_up_mod, &
	347	ONLY: advec_v_up
	348
	349	USE advec_w_pw_mod, &
	350	ONLY: advec_w_pw
	351
	352	USE advec_w_up_mod, &
	353	ONLY: advec_w_up
	354
	355	USE advec_ws, &
	356	ONLY: advec_s_ws, advec_u_ws, advec_v_ws, advec_w_ws
	357
[1875]	358	USE arrays_3d, &
[2292]	359	ONLY: diss_l_e, diss_l_nc, diss_l_nr, diss_l_pt, diss_l_q, diss_l_qc, &
	360	diss_l_qr, diss_l_s, diss_l_sa, diss_s_e, diss_s_nc, diss_s_nr, &
	361	diss_s_pt, diss_s_q, diss_s_qc, diss_s_qr, diss_s_s, diss_s_sa, &
	362	e, e_p, flux_s_e, flux_s_nc, flux_s_nr, flux_s_pt, flux_s_q, &
	363	flux_s_qc, flux_s_qr, flux_s_s, flux_s_sa, flux_l_e, flux_l_nc, &
	364	flux_l_nr, flux_l_pt, flux_l_q, flux_l_qc, flux_l_qr, flux_l_s, &
	365	flux_l_sa, nc, nc_p, nr, nr_p, pt, ptdf_x, ptdf_y, pt_init, &
	366	pt_p, prho, q, q_init, q_p, qc, qc_p, qr, qr_p, rdf, rdf_sc, &
[3294]	367	ref_state, rho_ocean, s, s_init, s_p, tend, te_m, tnc_m, &
	368	tnr_m, tpt_m, tq_m, tqc_m, tqr_m, ts_m, tu_m, tv_m, tw_m, u, &
	369	ug, u_init, u_p, v, vg, vpt, v_init, v_p, w, w_p
[2155]	370
[3274]	371	USE bulk_cloud_model_mod, &
	372	ONLY: call_microphysics_at_all_substeps, bulk_cloud_model, &
	373	bcm_actions, microphysics_sat_adjust, &
	374	microphysics_morrison, microphysics_seifert
	375
[3294]	376	USE buoyancy_mod, &
	377	ONLY: buoyancy
[2696]	378
[3294]	379	USE chem_modules, &
[3820]	380	ONLY: call_chem_at_all_substeps, chem_gasphase_on, cs_name, &
	381	deposition_dry
[3294]	382
[3833]	383	USE chem_gasphase_mod, &
	384	ONLY: nspec, nvar, spc_names
	385
[2696]	386	USE chem_photolysis_mod, &
	387	ONLY: photolysis_control
	388
[3458]	389	USE chemistry_model_mod, &
	390	ONLY: chem_boundary_conds, chem_depo, chem_integrate, &
[3833]	391	chem_prognostic_equations, chem_species
[3298]	392
[1875]	393	USE control_parameters, &
[3355]	394	ONLY: air_chemistry, constant_diffusion, &
[2696]	395	dp_external, dp_level_ind_b, dp_smooth_factor, dpdxy, dt_3d, &
[3182]	396	humidity, intermediate_timestep_count, &
[1875]	397	intermediate_timestep_count_max, large_scale_forcing, &
[3355]	398	large_scale_subsidence, neutral, nudging, &
[3294]	399	ocean_mode, passive_scalar, plant_canopy, pt_reference, &
[1875]	400	scalar_advec, scalar_advec, simulated_time, sloping_surface, &
[2232]	401	timestep_scheme, tsc, use_subsidence_tendencies, &
[2563]	402	use_upstream_for_tke, wind_turbine, ws_scheme_mom, &
[3467]	403	ws_scheme_sca, urban_surface, land_surface, &
[3582]	404	time_since_reference_point, salsa
[1875]	405
[3294]	406	USE coriolis_mod, &
	407	ONLY: coriolis
	408
[1875]	409	USE cpulog, &
[2696]	410	ONLY: cpu_log, log_point, log_point_s
[1875]	411
	412	USE diffusion_s_mod, &
[2118]	413	ONLY: diffusion_s
[1875]	414
	415	USE diffusion_u_mod, &
[2118]	416	ONLY: diffusion_u
[1875]	417
	418	USE diffusion_v_mod, &
[2118]	419	ONLY: diffusion_v
[1875]	420
	421	USE diffusion_w_mod, &
[2118]	422	ONLY: diffusion_w
[1875]	423
[3294]	424	USE indices, &
	425	ONLY: nbgp, nxl, nxlg, nxlu, nxr, nxrg, nyn, nyng, nys, nysg, nysv, &
	426	nzb, nzt, wall_flags_0
	427
[1875]	428	USE kinds
	429
[2320]	430	USE lsf_nudging_mod, &
	431	ONLY: ls_advec, nudge
[1875]	432
[3684]	433	USE module_interface, &
[3837]	434	ONLY: module_interface_actions, &
	435	module_interface_prognostic_equations
[3684]	436
[3294]	437	USE ocean_mod, &
[3302]	438	ONLY: ocean_prognostic_equations, stokes_drift_terms, stokes_force, &
	439	wave_breaking, wave_breaking_term
[3294]	440
[1875]	441	USE plant_canopy_model_mod, &
[2746]	442	ONLY: cthf, pcm_tendency
[1875]	443
[3771]	444	#if defined( __rrtmg )
[1875]	445	USE radiation_model_mod, &
[1976]	446	ONLY: radiation, radiation_tendency, &
[1875]	447	skip_time_do_radiation
[3771]	448	#endif
[3467]	449
	450	USE salsa_mod, &
	451	ONLY: aerosol_mass, aerosol_number, dt_salsa, last_salsa_time, nbins, &
[3582]	452	ncc_tot, ngast, salsa_boundary_conds, salsa_diagnostics, &
[3467]	453	salsa_driver, salsa_gas, salsa_gases_from_chem, salsa_tendency, &
	454	skip_time_do_salsa
	455
	456	USE salsa_util_mod, &
	457	ONLY: sums_salsa_ws_l
	458
[1875]	459	USE statistics, &
	460	ONLY: hom
	461
	462	USE subsidence_mod, &
	463	ONLY: subsidence
	464
[3294]	465	USE surface_mod, &
	466	ONLY : surf_def_h, surf_def_v, surf_lsm_h, surf_lsm_v, surf_usm_h, &
	467	surf_usm_v
	468
[2696]	469	USE turbulence_closure_mod, &
[3386]	470	ONLY: tcm_prognostic_equations
[2696]	471
[1914]	472	USE wind_turbine_model_mod, &
[2563]	473	ONLY: wtm_tendencies
[1875]	474
[1914]	475
[1875]	476	PRIVATE
[2118]	477	PUBLIC prognostic_equations_cache, prognostic_equations_vector
[1875]	478
	479	INTERFACE prognostic_equations_cache
	480	MODULE PROCEDURE prognostic_equations_cache
	481	END INTERFACE prognostic_equations_cache
	482
	483	INTERFACE prognostic_equations_vector
	484	MODULE PROCEDURE prognostic_equations_vector
	485	END INTERFACE prognostic_equations_vector
	486
	487
	488	CONTAINS
	489
	490
	491	!------------------------------------------------------------------------------!
	492	! Description:
	493	! ------------
	494	!> Version with one optimized loop over all equations. It is only allowed to
	495	!> be called for the Wicker and Skamarock or Piascek-Williams advection scheme.
	496	!>
	497	!> Here the calls of most subroutines are embedded in two DO loops over i and j,
	498	!> so communication between CPUs is not allowed (does not make sense) within
	499	!> these loops.
	500	!>
	501	!> (Optimized to avoid cache missings, i.e. for Power4/5-architectures.)
	502	!------------------------------------------------------------------------------!
[2155]	503
[1875]	504	SUBROUTINE prognostic_equations_cache
	505
	506
	507	IMPLICIT NONE
[3467]	508
	509	INTEGER(iwp) :: b !< index for aerosol size bins (salsa)
	510	INTEGER(iwp) :: c !< index for chemical compounds (salsa)
	511	INTEGER(iwp) :: g !< index for gaseous compounds (salsa)
[1875]	512	INTEGER(iwp) :: i !<
	513	INTEGER(iwp) :: i_omp_start !<
	514	INTEGER(iwp) :: j !<
	515	INTEGER(iwp) :: k !<
[3241]	516	!$ INTEGER(iwp) :: omp_get_thread_num !<
[1875]	517	INTEGER(iwp) :: tn = 0 !<
[2155]	518
[1875]	519	LOGICAL :: loop_start !<
[3761]	520	INTEGER(iwp) :: lsp
	521	INTEGER(iwp) :: lsp_usr !< lsp running index for chem spcs
[1875]	522
	523
	524	!
	525	!-- Time measurement can only be performed for the whole set of equations
	526	CALL cpu_log( log_point(32), 'all progn.equations', 'start' )
	527
	528	!
[2696]	529	!-- Calculation of chemical reactions. This is done outside of main loop,
	530	!-- since exchange of ghost points is required after this update of the
	531	!-- concentrations of chemical species
	532	IF ( air_chemistry ) THEN
[3298]	533	lsp_usr = 1
[2696]	534	!
[3719]	535	!-- Chemical reactions and deposition
[2696]	536	IF ( chem_gasphase_on ) THEN
[3337]	537	!
	538	!-- If required, calculate photolysis frequencies -
	539	!-- UNFINISHED: Why not before the intermediate timestep loop?
	540	IF ( intermediate_timestep_count == 1 ) THEN
	541	CALL photolysis_control
	542	ENDIF
[2696]	543
[3797]	544	IF ( intermediate_timestep_count == 1 .OR. &
	545	call_chem_at_all_substeps ) THEN
[3719]	546
[3797]	547	CALL cpu_log( log_point_s(19), 'chem.reactions', 'start' )
	548	!$OMP PARALLEL PRIVATE (i,j)
	549	!$OMP DO schedule(static,1)
	550	DO i = nxl, nxr
	551	DO j = nys, nyn
[3458]	552	CALL chem_integrate (i,j)
[3797]	553	ENDDO
	554	ENDDO
	555	!$OMP END PARALLEL
	556	CALL cpu_log( log_point_s(19), 'chem.reactions', 'stop' )
[3719]	557
[3820]	558	IF ( deposition_dry ) THEN
[3797]	559	CALL cpu_log( log_point_s(24), 'chem.deposition', 'start' )
	560	DO i = nxl, nxr
	561	DO j = nys, nyn
[3458]	562	CALL chem_depo(i,j)
[3797]	563	ENDDO
	564	ENDDO
	565	CALL cpu_log( log_point_s(24), 'chem.deposition', 'stop' )
	566	ENDIF
	567	ENDIF
[2696]	568	ENDIF
	569	!
	570	!-- Loop over chemical species
[3719]	571	CALL cpu_log( log_point_s(84), 'chem.exch-horiz', 'start' )
[3298]	572	DO lsp = 1, nspec
	573	CALL exchange_horiz( chem_species(lsp)%conc, nbgp )
	574	lsp_usr = 1
	575	DO WHILE ( TRIM( cs_name( lsp_usr ) ) /= 'novalue' )
	576	IF ( TRIM(chem_species(lsp)%name) == TRIM(cs_name(lsp_usr)) ) THEN
	577
	578	CALL chem_boundary_conds( chem_species(lsp)%conc_p, &
	579	chem_species(lsp)%conc_pr_init )
	580
	581	ENDIF
	582	lsp_usr = lsp_usr +1
	583	ENDDO
[3467]	584
	585
[2696]	586	ENDDO
[3719]	587	CALL cpu_log( log_point_s(84), 'chem.exch-horiz', 'stop' )
[2696]	588
	589	ENDIF
	590	!
[3467]	591	!-- Run SALSA and aerosol dynamic processes. SALSA is run with a longer time
	592	!-- step. The exchange of ghost points is required after this update of the
	593	!-- concentrations of aerosol number and mass
	594	IF ( salsa ) THEN
	595
	596	IF ( time_since_reference_point >= skip_time_do_salsa ) THEN
	597	IF ( ( time_since_reference_point - last_salsa_time ) >= dt_salsa ) &
	598	THEN
	599	CALL cpu_log( log_point_s(90), 'salsa processes ', 'start' )
	600	!$OMP PARALLEL PRIVATE (i,j,b,c,g)
	601	!$OMP DO
	602	!
	603	!-- Call salsa processes
	604	DO i = nxl, nxr
	605	DO j = nys, nyn
	606	CALL salsa_diagnostics( i, j )
	607	CALL salsa_driver( i, j, 3 )
	608	CALL salsa_diagnostics( i, j )
	609	ENDDO
	610	ENDDO
	611
	612	CALL cpu_log( log_point_s(90), 'salsa processes ', 'stop' )
	613
	614	CALL cpu_log( log_point_s(91), 'salsa exch-horiz ', 'start' )
	615	!
	616	!-- Exchange ghost points and decycle if needed.
	617	DO b = 1, nbins
	618	CALL exchange_horiz( aerosol_number(b)%conc, nbgp )
	619	CALL salsa_boundary_conds( aerosol_number(b)%conc_p, &
	620	aerosol_number(b)%init )
	621	DO c = 1, ncc_tot
	622	CALL exchange_horiz( aerosol_mass((c-1)*nbins+b)%conc, nbgp )
	623	CALL salsa_boundary_conds( &
	624	aerosol_mass((c-1)*nbins+b)%conc_p, &
	625	aerosol_mass((c-1)*nbins+b)%init )
	626	ENDDO
	627	ENDDO
	628
	629	IF ( .NOT. salsa_gases_from_chem ) THEN
	630	DO g = 1, ngast
	631	CALL exchange_horiz( salsa_gas(g)%conc, nbgp )
	632	CALL salsa_boundary_conds( salsa_gas(g)%conc_p, &
	633	salsa_gas(g)%init )
	634	ENDDO
	635	ENDIF
	636	CALL cpu_log( log_point_s(91), 'salsa exch-horiz ', 'stop' )
	637
	638	!$OMP END PARALLEL
	639	last_salsa_time = time_since_reference_point
	640
	641	ENDIF
	642
	643	ENDIF
	644
	645	ENDIF
	646
	647	!
[2155]	648	!-- If required, calculate cloud microphysics
[3274]	649	IF ( bulk_cloud_model .AND. .NOT. microphysics_sat_adjust .AND. &
[2155]	650	( intermediate_timestep_count == 1 .OR. &
[2192]	651	call_microphysics_at_all_substeps ) ) &
	652	THEN
[2261]	653	!$OMP PARALLEL PRIVATE (i,j)
[2192]	654	!$OMP DO
[2155]	655	DO i = nxlg, nxrg
	656	DO j = nysg, nyng
[3274]	657	CALL bcm_actions( i, j )
[2192]	658	ENDDO
	659	ENDDO
	660	!$OMP END PARALLEL
[2155]	661	ENDIF
	662
[2192]	663	!
	664	!-- Loop over all prognostic equations
[3467]	665	!-- b, c ang g added for SALSA
	666	!$OMP PARALLEL PRIVATE (i,i_omp_start,j,k,loop_start,tn,b,c,g)
[2192]	667
	668	!$ tn = omp_get_thread_num()
	669	loop_start = .TRUE.
	670
	671	!$OMP DO
[1875]	672	DO i = nxl, nxr
	673
	674	!
	675	!-- Store the first loop index. It differs for each thread and is required
	676	!-- later in advec_ws
	677	IF ( loop_start ) THEN
	678	loop_start = .FALSE.
[2155]	679	i_omp_start = i
[1875]	680	ENDIF
	681
	682	DO j = nys, nyn
	683	!
[3022]	684	!-- Tendency terms for u-velocity component. Please note, in case of
	685	!-- non-cyclic boundary conditions the grid point i=0 is excluded from
	686	!-- the prognostic equations for the u-component.
	687	IF ( i >= nxlu ) THEN
[1875]	688
	689	tend(:,j,i) = 0.0_wp
	690	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	691	IF ( ws_scheme_mom ) THEN
	692	CALL advec_u_ws( i, j, i_omp_start, tn )
[2155]	693	ELSE
[1875]	694	CALL advec_u_pw( i, j )
[2155]	695	ENDIF
[1875]	696	ELSE
	697	CALL advec_u_up( i, j )
	698	ENDIF
	699	CALL diffusion_u( i, j )
	700	CALL coriolis( i, j, 1 )
	701	IF ( sloping_surface .AND. .NOT. neutral ) THEN
	702	CALL buoyancy( i, j, pt, 1 )
	703	ENDIF
	704
	705	!
	706	!-- Drag by plant canopy
	707	IF ( plant_canopy ) CALL pcm_tendency( i, j, 1 )
	708
	709	!
	710	!-- External pressure gradient
	711	IF ( dp_external ) THEN
	712	DO k = dp_level_ind_b+1, nzt
	713	tend(k,j,i) = tend(k,j,i) - dpdxy(1) * dp_smooth_factor(k)
	714	ENDDO
	715	ENDIF
	716
	717	!
	718	!-- Nudging
	719	IF ( nudging ) CALL nudge( i, j, simulated_time, 'u' )
	720
[1914]	721	!
[3302]	722	!-- Effect of Stokes drift (in ocean mode only)
	723	IF ( stokes_force ) CALL stokes_drift_terms( i, j, 1 )
	724
	725	!
[1914]	726	!-- Forces by wind turbines
	727	IF ( wind_turbine ) CALL wtm_tendencies( i, j, 1 )
	728
[3684]	729	CALL module_interface_actions( i, j, 'u-tendency' )
[1875]	730	!
	731	!-- Prognostic equation for u-velocity component
[2232]	732	DO k = nzb+1, nzt
	733
	734	u_p(k,j,i) = u(k,j,i) + ( dt_3d * &
	735	( tsc(2) * tend(k,j,i) + &
	736	tsc(3) * tu_m(k,j,i) ) &
	737	- tsc(5) * rdf(k) &
	738	* ( u(k,j,i) - u_init(k) ) &
	739	) * MERGE( 1.0_wp, 0.0_wp, &
	740	BTEST( wall_flags_0(k,j,i), 1 )&
	741	)
[1875]	742	ENDDO
	743
	744	!
[3302]	745	!-- Add turbulence generated by wave breaking (in ocean mode only)
	746	IF ( wave_breaking .AND. &
	747	intermediate_timestep_count == intermediate_timestep_count_max )&
	748	THEN
	749	CALL wave_breaking_term( i, j, 1 )
	750	ENDIF
	751
	752	!
[1875]	753	!-- Calculate tendencies for the next Runge-Kutta step
	754	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	755	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	756	DO k = nzb+1, nzt
[1875]	757	tu_m(k,j,i) = tend(k,j,i)
	758	ENDDO
	759	ELSEIF ( intermediate_timestep_count < &
	760	intermediate_timestep_count_max ) THEN
[2232]	761	DO k = nzb+1, nzt
	762	tu_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	763	+ 5.3125_wp * tu_m(k,j,i)
[1875]	764	ENDDO
	765	ENDIF
	766	ENDIF
	767
	768	ENDIF
	769	!
[3022]	770	!-- Tendency terms for v-velocity component. Please note, in case of
	771	!-- non-cyclic boundary conditions the grid point j=0 is excluded from
	772	!-- the prognostic equations for the v-component. !--
	773	IF ( j >= nysv ) THEN
[1875]	774
	775	tend(:,j,i) = 0.0_wp
	776	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	777	IF ( ws_scheme_mom ) THEN
	778	CALL advec_v_ws( i, j, i_omp_start, tn )
[2155]	779	ELSE
[1875]	780	CALL advec_v_pw( i, j )
	781	ENDIF
	782	ELSE
	783	CALL advec_v_up( i, j )
	784	ENDIF
	785	CALL diffusion_v( i, j )
	786	CALL coriolis( i, j, 2 )
	787
	788	!
	789	!-- Drag by plant canopy
[2155]	790	IF ( plant_canopy ) CALL pcm_tendency( i, j, 2 )
[1875]	791
	792	!
	793	!-- External pressure gradient
	794	IF ( dp_external ) THEN
	795	DO k = dp_level_ind_b+1, nzt
	796	tend(k,j,i) = tend(k,j,i) - dpdxy(2) * dp_smooth_factor(k)
	797	ENDDO
	798	ENDIF
	799
	800	!
	801	!-- Nudging
	802	IF ( nudging ) CALL nudge( i, j, simulated_time, 'v' )
	803
[1914]	804	!
[3302]	805	!-- Effect of Stokes drift (in ocean mode only)
	806	IF ( stokes_force ) CALL stokes_drift_terms( i, j, 2 )
	807
	808	!
[1914]	809	!-- Forces by wind turbines
	810	IF ( wind_turbine ) CALL wtm_tendencies( i, j, 2 )
	811
[3684]	812	CALL module_interface_actions( i, j, 'v-tendency' )
[1875]	813	!
	814	!-- Prognostic equation for v-velocity component
[2232]	815	DO k = nzb+1, nzt
	816	v_p(k,j,i) = v(k,j,i) + ( dt_3d * &
	817	( tsc(2) * tend(k,j,i) + &
	818	tsc(3) * tv_m(k,j,i) ) &
	819	- tsc(5) * rdf(k) &
	820	* ( v(k,j,i) - v_init(k) )&
	821	) * MERGE( 1.0_wp, 0.0_wp, &
	822	BTEST( wall_flags_0(k,j,i), 2 )&
	823	)
[1875]	824	ENDDO
	825
	826	!
[3302]	827	!-- Add turbulence generated by wave breaking (in ocean mode only)
	828	IF ( wave_breaking .AND. &
	829	intermediate_timestep_count == intermediate_timestep_count_max )&
	830	THEN
	831	CALL wave_breaking_term( i, j, 2 )
	832	ENDIF
	833
	834	!
[1875]	835	!-- Calculate tendencies for the next Runge-Kutta step
	836	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	837	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	838	DO k = nzb+1, nzt
[1875]	839	tv_m(k,j,i) = tend(k,j,i)
	840	ENDDO
	841	ELSEIF ( intermediate_timestep_count < &
	842	intermediate_timestep_count_max ) THEN
[2232]	843	DO k = nzb+1, nzt
	844	tv_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	845	+ 5.3125_wp * tv_m(k,j,i)
[1875]	846	ENDDO
	847	ENDIF
	848	ENDIF
	849
	850	ENDIF
	851
	852	!
	853	!-- Tendency terms for w-velocity component
	854	tend(:,j,i) = 0.0_wp
	855	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	856	IF ( ws_scheme_mom ) THEN
	857	CALL advec_w_ws( i, j, i_omp_start, tn )
[2155]	858	ELSE
[1875]	859	CALL advec_w_pw( i, j )
	860	END IF
	861	ELSE
	862	CALL advec_w_up( i, j )
	863	ENDIF
	864	CALL diffusion_w( i, j )
	865	CALL coriolis( i, j, 3 )
	866
	867	IF ( .NOT. neutral ) THEN
[3294]	868	IF ( ocean_mode ) THEN
[2031]	869	CALL buoyancy( i, j, rho_ocean, 3 )
[1875]	870	ELSE
	871	IF ( .NOT. humidity ) THEN
	872	CALL buoyancy( i, j, pt, 3 )
	873	ELSE
	874	CALL buoyancy( i, j, vpt, 3 )
	875	ENDIF
	876	ENDIF
	877	ENDIF
	878
	879	!
	880	!-- Drag by plant canopy
	881	IF ( plant_canopy ) CALL pcm_tendency( i, j, 3 )
	882
[1914]	883	!
[3302]	884	!-- Effect of Stokes drift (in ocean mode only)
	885	IF ( stokes_force ) CALL stokes_drift_terms( i, j, 3 )
	886
	887	!
[1914]	888	!-- Forces by wind turbines
	889	IF ( wind_turbine ) CALL wtm_tendencies( i, j, 3 )
	890
[3684]	891	CALL module_interface_actions( i, j, 'w-tendency' )
[1875]	892	!
	893	!-- Prognostic equation for w-velocity component
[2232]	894	DO k = nzb+1, nzt-1
	895	w_p(k,j,i) = w(k,j,i) + ( dt_3d * &
	896	( tsc(2) * tend(k,j,i) + &
[1875]	897	tsc(3) * tw_m(k,j,i) ) &
[2232]	898	- tsc(5) * rdf(k) * w(k,j,i) &
	899	) * MERGE( 1.0_wp, 0.0_wp, &
	900	BTEST( wall_flags_0(k,j,i), 3 )&
	901	)
[1875]	902	ENDDO
	903
	904	!
	905	!-- Calculate tendencies for the next Runge-Kutta step
	906	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	907	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	908	DO k = nzb+1, nzt-1
[1875]	909	tw_m(k,j,i) = tend(k,j,i)
	910	ENDDO
	911	ELSEIF ( intermediate_timestep_count < &
	912	intermediate_timestep_count_max ) THEN
[2232]	913	DO k = nzb+1, nzt-1
	914	tw_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	915	+ 5.3125_wp * tw_m(k,j,i)
[1875]	916	ENDDO
	917	ENDIF
	918	ENDIF
	919
	920	!
	921	!-- If required, compute prognostic equation for potential temperature
	922	IF ( .NOT. neutral ) THEN
	923	!
	924	!-- Tendency terms for potential temperature
	925	tend(:,j,i) = 0.0_wp
	926	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	927	IF ( ws_scheme_sca ) THEN
[2232]	928	CALL advec_s_ws( i, j, pt, 'pt', flux_s_pt, diss_s_pt, &
[1875]	929	flux_l_pt, diss_l_pt, i_omp_start, tn )
	930	ELSE
	931	CALL advec_s_pw( i, j, pt )
	932	ENDIF
	933	ELSE
	934	CALL advec_s_up( i, j, pt )
	935	ENDIF
[2232]	936	CALL diffusion_s( i, j, pt, &
	937	surf_def_h(0)%shf, surf_def_h(1)%shf, &
	938	surf_def_h(2)%shf, &
	939	surf_lsm_h%shf, surf_usm_h%shf, &
	940	surf_def_v(0)%shf, surf_def_v(1)%shf, &
	941	surf_def_v(2)%shf, surf_def_v(3)%shf, &
	942	surf_lsm_v(0)%shf, surf_lsm_v(1)%shf, &
	943	surf_lsm_v(2)%shf, surf_lsm_v(3)%shf, &
	944	surf_usm_v(0)%shf, surf_usm_v(1)%shf, &
	945	surf_usm_v(2)%shf, surf_usm_v(3)%shf )
[1875]	946
	947	!
	948	!-- Consideration of heat sources within the plant canopy
[3014]	949	IF ( plant_canopy .AND. &
	950	(cthf /= 0.0_wp .OR. urban_surface .OR. land_surface) ) THEN
[1875]	951	CALL pcm_tendency( i, j, 4 )
	952	ENDIF
	953
	954	!
	955	!-- Large scale advection
	956	IF ( large_scale_forcing ) THEN
	957	CALL ls_advec( i, j, simulated_time, 'pt' )
[2155]	958	ENDIF
[1875]	959
	960	!
	961	!-- Nudging
[2155]	962	IF ( nudging ) CALL nudge( i, j, simulated_time, 'pt' )
[1875]	963
	964	!
	965	!-- If required, compute effect of large-scale subsidence/ascent
	966	IF ( large_scale_subsidence .AND. &
	967	.NOT. use_subsidence_tendencies ) THEN
	968	CALL subsidence( i, j, tend, pt, pt_init, 2 )
	969	ENDIF
	970
[3771]	971	#if defined( __rrtmg )
[1875]	972	!
	973	!-- If required, add tendency due to radiative heating/cooling
[1976]	974	IF ( radiation .AND. &
[1875]	975	simulated_time > skip_time_do_radiation ) THEN
	976	CALL radiation_tendency ( i, j, tend )
	977	ENDIF
[3771]	978	#endif
[1875]	979
[3684]	980	CALL module_interface_actions( i, j, 'pt-tendency' )
[1875]	981	!
	982	!-- Prognostic equation for potential temperature
[2232]	983	DO k = nzb+1, nzt
	984	pt_p(k,j,i) = pt(k,j,i) + ( dt_3d * &
	985	( tsc(2) * tend(k,j,i) + &
[1875]	986	tsc(3) * tpt_m(k,j,i) ) &
[2232]	987	- tsc(5) &
	988	* ( pt(k,j,i) - pt_init(k) ) &
	989	* ( rdf_sc(k) + ptdf_x(i) &
	990	+ ptdf_y(j) ) &
	991	) &
	992	* MERGE( 1.0_wp, 0.0_wp, &
	993	BTEST( wall_flags_0(k,j,i), 0 )&
	994	)
[1875]	995	ENDDO
	996
	997	!
	998	!-- Calculate tendencies for the next Runge-Kutta step
	999	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1000	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	1001	DO k = nzb+1, nzt
[1875]	1002	tpt_m(k,j,i) = tend(k,j,i)
	1003	ENDDO
	1004	ELSEIF ( intermediate_timestep_count < &
	1005	intermediate_timestep_count_max ) THEN
[2232]	1006	DO k = nzb+1, nzt
	1007	tpt_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1008	5.3125_wp * tpt_m(k,j,i)
[1875]	1009	ENDDO
	1010	ENDIF
	1011	ENDIF
	1012
	1013	ENDIF
	1014
	1015	!
[1960]	1016	!-- If required, compute prognostic equation for total water content
	1017	IF ( humidity ) THEN
[1875]	1018
	1019	!
	1020	!-- Tendency-terms for total water content / scalar
	1021	tend(:,j,i) = 0.0_wp
	1022	IF ( timestep_scheme(1:5) == 'runge' ) &
	1023	THEN
	1024	IF ( ws_scheme_sca ) THEN
[2155]	1025	CALL advec_s_ws( i, j, q, 'q', flux_s_q, &
[1875]	1026	diss_s_q, flux_l_q, diss_l_q, i_omp_start, tn )
[2155]	1027	ELSE
[1875]	1028	CALL advec_s_pw( i, j, q )
	1029	ENDIF
	1030	ELSE
	1031	CALL advec_s_up( i, j, q )
	1032	ENDIF
[2232]	1033	CALL diffusion_s( i, j, q, &
	1034	surf_def_h(0)%qsws, surf_def_h(1)%qsws, &
	1035	surf_def_h(2)%qsws, &
	1036	surf_lsm_h%qsws, surf_usm_h%qsws, &
	1037	surf_def_v(0)%qsws, surf_def_v(1)%qsws, &
	1038	surf_def_v(2)%qsws, surf_def_v(3)%qsws, &
	1039	surf_lsm_v(0)%qsws, surf_lsm_v(1)%qsws, &
	1040	surf_lsm_v(2)%qsws, surf_lsm_v(3)%qsws, &
	1041	surf_usm_v(0)%qsws, surf_usm_v(1)%qsws, &
	1042	surf_usm_v(2)%qsws, surf_usm_v(3)%qsws )
[1875]	1043
	1044	!
[1960]	1045	!-- Sink or source of humidity due to canopy elements
[1875]	1046	IF ( plant_canopy ) CALL pcm_tendency( i, j, 5 )
	1047
	1048	!
	1049	!-- Large scale advection
	1050	IF ( large_scale_forcing ) THEN
	1051	CALL ls_advec( i, j, simulated_time, 'q' )
	1052	ENDIF
	1053
	1054	!
	1055	!-- Nudging
[2155]	1056	IF ( nudging ) CALL nudge( i, j, simulated_time, 'q' )
[1875]	1057
	1058	!
	1059	!-- If required compute influence of large-scale subsidence/ascent
	1060	IF ( large_scale_subsidence .AND. &
	1061	.NOT. use_subsidence_tendencies ) THEN
	1062	CALL subsidence( i, j, tend, q, q_init, 3 )
	1063	ENDIF
	1064
[3684]	1065	CALL module_interface_actions( i, j, 'q-tendency' )
[1875]	1066
	1067	!
	1068	!-- Prognostic equation for total water content / scalar
[2232]	1069	DO k = nzb+1, nzt
	1070	q_p(k,j,i) = q(k,j,i) + ( dt_3d * &
	1071	( tsc(2) * tend(k,j,i) + &
[1875]	1072	tsc(3) * tq_m(k,j,i) ) &
[2232]	1073	- tsc(5) * rdf_sc(k) * &
	1074	( q(k,j,i) - q_init(k) ) &
	1075	) &
	1076	* MERGE( 1.0_wp, 0.0_wp, &
	1077	BTEST( wall_flags_0(k,j,i), 0 )&
	1078	)
[1875]	1079	IF ( q_p(k,j,i) < 0.0_wp ) q_p(k,j,i) = 0.1_wp * q(k,j,i)
	1080	ENDDO
	1081
	1082	!
	1083	!-- Calculate tendencies for the next Runge-Kutta step
	1084	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1085	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	1086	DO k = nzb+1, nzt
[1875]	1087	tq_m(k,j,i) = tend(k,j,i)
	1088	ENDDO
	1089	ELSEIF ( intermediate_timestep_count < &
	1090	intermediate_timestep_count_max ) THEN
[2232]	1091	DO k = nzb+1, nzt
	1092	tq_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1093	5.3125_wp * tq_m(k,j,i)
[1875]	1094	ENDDO
	1095	ENDIF
	1096	ENDIF
	1097
	1098	!
[2292]	1099	!-- If required, calculate prognostic equations for cloud water content
	1100	!-- and cloud drop concentration
[3274]	1101	IF ( bulk_cloud_model .AND. microphysics_morrison ) THEN
[2292]	1102	!
	1103	!-- Calculate prognostic equation for cloud water content
	1104	tend(:,j,i) = 0.0_wp
	1105	IF ( timestep_scheme(1:5) == 'runge' ) &
	1106	THEN
	1107	IF ( ws_scheme_sca ) THEN
	1108	CALL advec_s_ws( i, j, qc, 'qc', flux_s_qc, &
	1109	diss_s_qc, flux_l_qc, diss_l_qc, &
	1110	i_omp_start, tn )
	1111	ELSE
	1112	CALL advec_s_pw( i, j, qc )
	1113	ENDIF
	1114	ELSE
	1115	CALL advec_s_up( i, j, qc )
	1116	ENDIF
	1117	CALL diffusion_s( i, j, qc, &
	1118	surf_def_h(0)%qcsws, surf_def_h(1)%qcsws, &
	1119	surf_def_h(2)%qcsws, &
	1120	surf_lsm_h%qcsws, surf_usm_h%qcsws, &
	1121	surf_def_v(0)%qcsws, surf_def_v(1)%qcsws, &
	1122	surf_def_v(2)%qcsws, surf_def_v(3)%qcsws, &
	1123	surf_lsm_v(0)%qcsws, surf_lsm_v(1)%qcsws, &
	1124	surf_lsm_v(2)%qcsws, surf_lsm_v(3)%qcsws, &
	1125	surf_usm_v(0)%qcsws, surf_usm_v(1)%qcsws, &
	1126	surf_usm_v(2)%qcsws, surf_usm_v(3)%qcsws )
	1127
	1128	!
	1129	!-- Prognostic equation for cloud water content
	1130	DO k = nzb+1, nzt
	1131	qc_p(k,j,i) = qc(k,j,i) + ( dt_3d * &
	1132	( tsc(2) * tend(k,j,i) + &
	1133	tsc(3) * tqc_m(k,j,i) )&
	1134	- tsc(5) * rdf_sc(k) &
	1135	* qc(k,j,i) &
	1136	) &
	1137	* MERGE( 1.0_wp, 0.0_wp, &
	1138	BTEST( wall_flags_0(k,j,i), 0 )&
	1139	)
	1140	IF ( qc_p(k,j,i) < 0.0_wp ) qc_p(k,j,i) = 0.0_wp
	1141	ENDDO
	1142	!
	1143	!-- Calculate tendencies for the next Runge-Kutta step
	1144	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1145	IF ( intermediate_timestep_count == 1 ) THEN
	1146	DO k = nzb+1, nzt
	1147	tqc_m(k,j,i) = tend(k,j,i)
	1148	ENDDO
	1149	ELSEIF ( intermediate_timestep_count < &
	1150	intermediate_timestep_count_max ) THEN
	1151	DO k = nzb+1, nzt
	1152	tqc_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1153	5.3125_wp * tqc_m(k,j,i)
	1154	ENDDO
	1155	ENDIF
	1156	ENDIF
	1157
	1158	!
	1159	!-- Calculate prognostic equation for cloud drop concentration.
	1160	tend(:,j,i) = 0.0_wp
	1161	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1162	IF ( ws_scheme_sca ) THEN
	1163	CALL advec_s_ws( i, j, nc, 'nc', flux_s_nc, &
	1164	diss_s_nc, flux_l_nc, diss_l_nc, &
	1165	i_omp_start, tn )
	1166	ELSE
	1167	CALL advec_s_pw( i, j, nc )
	1168	ENDIF
	1169	ELSE
	1170	CALL advec_s_up( i, j, nc )
	1171	ENDIF
	1172	CALL diffusion_s( i, j, nc, &
	1173	surf_def_h(0)%ncsws, surf_def_h(1)%ncsws, &
	1174	surf_def_h(2)%ncsws, &
	1175	surf_lsm_h%ncsws, surf_usm_h%ncsws, &
	1176	surf_def_v(0)%ncsws, surf_def_v(1)%ncsws, &
	1177	surf_def_v(2)%ncsws, surf_def_v(3)%ncsws, &
	1178	surf_lsm_v(0)%ncsws, surf_lsm_v(1)%ncsws, &
	1179	surf_lsm_v(2)%ncsws, surf_lsm_v(3)%ncsws, &
	1180	surf_usm_v(0)%ncsws, surf_usm_v(1)%ncsws, &
	1181	surf_usm_v(2)%ncsws, surf_usm_v(3)%ncsws )
	1182
	1183	!
	1184	!-- Prognostic equation for cloud drop concentration
	1185	DO k = nzb+1, nzt
	1186	nc_p(k,j,i) = nc(k,j,i) + ( dt_3d * &
	1187	( tsc(2) * tend(k,j,i) + &
	1188	tsc(3) * tnc_m(k,j,i) )&
	1189	- tsc(5) * rdf_sc(k) &
	1190	* nc(k,j,i) &
	1191	) &
	1192	* MERGE( 1.0_wp, 0.0_wp, &
	1193	BTEST( wall_flags_0(k,j,i), 0 )&
	1194	)
	1195	IF ( nc_p(k,j,i) < 0.0_wp ) nc_p(k,j,i) = 0.0_wp
	1196	ENDDO
	1197	!
	1198	!-- Calculate tendencies for the next Runge-Kutta step
	1199	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1200	IF ( intermediate_timestep_count == 1 ) THEN
	1201	DO k = nzb+1, nzt
	1202	tnc_m(k,j,i) = tend(k,j,i)
	1203	ENDDO
	1204	ELSEIF ( intermediate_timestep_count < &
	1205	intermediate_timestep_count_max ) THEN
	1206	DO k = nzb+1, nzt
	1207	tnc_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1208	5.3125_wp * tnc_m(k,j,i)
	1209	ENDDO
	1210	ENDIF
	1211	ENDIF
	1212
	1213	ENDIF
	1214	!
[2155]	1215	!-- If required, calculate prognostic equations for rain water content
[1875]	1216	!-- and rain drop concentration
[3274]	1217	IF ( bulk_cloud_model .AND. microphysics_seifert ) THEN
[1875]	1218	!
	1219	!-- Calculate prognostic equation for rain water content
	1220	tend(:,j,i) = 0.0_wp
	1221	IF ( timestep_scheme(1:5) == 'runge' ) &
	1222	THEN
	1223	IF ( ws_scheme_sca ) THEN
[2155]	1224	CALL advec_s_ws( i, j, qr, 'qr', flux_s_qr, &
[1875]	1225	diss_s_qr, flux_l_qr, diss_l_qr, &
	1226	i_omp_start, tn )
[2155]	1227	ELSE
[1875]	1228	CALL advec_s_pw( i, j, qr )
	1229	ENDIF
	1230	ELSE
	1231	CALL advec_s_up( i, j, qr )
	1232	ENDIF
[2232]	1233	CALL diffusion_s( i, j, qr, &
	1234	surf_def_h(0)%qrsws, surf_def_h(1)%qrsws, &
	1235	surf_def_h(2)%qrsws, &
	1236	surf_lsm_h%qrsws, surf_usm_h%qrsws, &
	1237	surf_def_v(0)%qrsws, surf_def_v(1)%qrsws, &
	1238	surf_def_v(2)%qrsws, surf_def_v(3)%qrsws, &
	1239	surf_lsm_v(0)%qrsws, surf_lsm_v(1)%qrsws, &
	1240	surf_lsm_v(2)%qrsws, surf_lsm_v(3)%qrsws, &
	1241	surf_usm_v(0)%qrsws, surf_usm_v(1)%qrsws, &
	1242	surf_usm_v(2)%qrsws, surf_usm_v(3)%qrsws )
[1875]	1243
	1244	!
	1245	!-- Prognostic equation for rain water content
[2232]	1246	DO k = nzb+1, nzt
	1247	qr_p(k,j,i) = qr(k,j,i) + ( dt_3d * &
	1248	( tsc(2) * tend(k,j,i) + &
	1249	tsc(3) * tqr_m(k,j,i) )&
	1250	- tsc(5) * rdf_sc(k) &
	1251	* qr(k,j,i) &
	1252	) &
	1253	* MERGE( 1.0_wp, 0.0_wp, &
	1254	BTEST( wall_flags_0(k,j,i), 0 )&
	1255	)
[1875]	1256	IF ( qr_p(k,j,i) < 0.0_wp ) qr_p(k,j,i) = 0.0_wp
	1257	ENDDO
	1258	!
	1259	!-- Calculate tendencies for the next Runge-Kutta step
	1260	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1261	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	1262	DO k = nzb+1, nzt
[1875]	1263	tqr_m(k,j,i) = tend(k,j,i)
	1264	ENDDO
	1265	ELSEIF ( intermediate_timestep_count < &
	1266	intermediate_timestep_count_max ) THEN
[2232]	1267	DO k = nzb+1, nzt
	1268	tqr_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1269	5.3125_wp * tqr_m(k,j,i)
[1875]	1270	ENDDO
	1271	ENDIF
	1272	ENDIF
	1273
	1274	!
	1275	!-- Calculate prognostic equation for rain drop concentration.
	1276	tend(:,j,i) = 0.0_wp
	1277	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1278	IF ( ws_scheme_sca ) THEN
[2155]	1279	CALL advec_s_ws( i, j, nr, 'nr', flux_s_nr, &
[1875]	1280	diss_s_nr, flux_l_nr, diss_l_nr, &
	1281	i_omp_start, tn )
[2155]	1282	ELSE
[1875]	1283	CALL advec_s_pw( i, j, nr )
	1284	ENDIF
	1285	ELSE
	1286	CALL advec_s_up( i, j, nr )
	1287	ENDIF
[2232]	1288	CALL diffusion_s( i, j, nr, &
	1289	surf_def_h(0)%nrsws, surf_def_h(1)%nrsws, &
	1290	surf_def_h(2)%nrsws, &
	1291	surf_lsm_h%nrsws, surf_usm_h%nrsws, &
	1292	surf_def_v(0)%nrsws, surf_def_v(1)%nrsws, &
	1293	surf_def_v(2)%nrsws, surf_def_v(3)%nrsws, &
	1294	surf_lsm_v(0)%nrsws, surf_lsm_v(1)%nrsws, &
	1295	surf_lsm_v(2)%nrsws, surf_lsm_v(3)%nrsws, &
	1296	surf_usm_v(0)%nrsws, surf_usm_v(1)%nrsws, &
	1297	surf_usm_v(2)%nrsws, surf_usm_v(3)%nrsws )
[1875]	1298
	1299	!
	1300	!-- Prognostic equation for rain drop concentration
[2232]	1301	DO k = nzb+1, nzt
	1302	nr_p(k,j,i) = nr(k,j,i) + ( dt_3d * &
	1303	( tsc(2) * tend(k,j,i) + &
	1304	tsc(3) * tnr_m(k,j,i) )&
	1305	- tsc(5) * rdf_sc(k) &
	1306	* nr(k,j,i) &
	1307	) &
	1308	* MERGE( 1.0_wp, 0.0_wp, &
	1309	BTEST( wall_flags_0(k,j,i), 0 )&
	1310	)
[1875]	1311	IF ( nr_p(k,j,i) < 0.0_wp ) nr_p(k,j,i) = 0.0_wp
	1312	ENDDO
	1313	!
	1314	!-- Calculate tendencies for the next Runge-Kutta step
	1315	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1316	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	1317	DO k = nzb+1, nzt
[1875]	1318	tnr_m(k,j,i) = tend(k,j,i)
	1319	ENDDO
	1320	ELSEIF ( intermediate_timestep_count < &
	1321	intermediate_timestep_count_max ) THEN
[2232]	1322	DO k = nzb+1, nzt
	1323	tnr_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1324	5.3125_wp * tnr_m(k,j,i)
[1875]	1325	ENDDO
	1326	ENDIF
	1327	ENDIF
	1328
	1329	ENDIF
	1330
	1331	ENDIF
[2155]	1332
[1960]	1333	!
	1334	!-- If required, compute prognostic equation for scalar
	1335	IF ( passive_scalar ) THEN
	1336	!
	1337	!-- Tendency-terms for total water content / scalar
	1338	tend(:,j,i) = 0.0_wp
	1339	IF ( timestep_scheme(1:5) == 'runge' ) &
	1340	THEN
	1341	IF ( ws_scheme_sca ) THEN
[2155]	1342	CALL advec_s_ws( i, j, s, 's', flux_s_s, &
[1960]	1343	diss_s_s, flux_l_s, diss_l_s, i_omp_start, tn )
[2155]	1344	ELSE
[1960]	1345	CALL advec_s_pw( i, j, s )
	1346	ENDIF
	1347	ELSE
	1348	CALL advec_s_up( i, j, s )
	1349	ENDIF
[2232]	1350	CALL diffusion_s( i, j, s, &
	1351	surf_def_h(0)%ssws, surf_def_h(1)%ssws, &
	1352	surf_def_h(2)%ssws, &
	1353	surf_lsm_h%ssws, surf_usm_h%ssws, &
	1354	surf_def_v(0)%ssws, surf_def_v(1)%ssws, &
	1355	surf_def_v(2)%ssws, surf_def_v(3)%ssws, &
	1356	surf_lsm_v(0)%ssws, surf_lsm_v(1)%ssws, &
	1357	surf_lsm_v(2)%ssws, surf_lsm_v(3)%ssws, &
	1358	surf_usm_v(0)%ssws, surf_usm_v(1)%ssws, &
	1359	surf_usm_v(2)%ssws, surf_usm_v(3)%ssws )
[1875]	1360
	1361	!
[1960]	1362	!-- Sink or source of scalar concentration due to canopy elements
	1363	IF ( plant_canopy ) CALL pcm_tendency( i, j, 7 )
	1364
	1365	!
	1366	!-- Large scale advection, still need to be extended for scalars
	1367	! IF ( large_scale_forcing ) THEN
	1368	! CALL ls_advec( i, j, simulated_time, 's' )
	1369	! ENDIF
	1370
	1371	!
	1372	!-- Nudging, still need to be extended for scalars
[2155]	1373	! IF ( nudging ) CALL nudge( i, j, simulated_time, 's' )
[1960]	1374
	1375	!
	1376	!-- If required compute influence of large-scale subsidence/ascent.
[2155]	1377	!-- Note, the last argument is of no meaning in this case, as it is
	1378	!-- only used in conjunction with large_scale_forcing, which is to
[1960]	1379	!-- date not implemented for scalars.
	1380	IF ( large_scale_subsidence .AND. &
	1381	.NOT. use_subsidence_tendencies .AND. &
	1382	.NOT. large_scale_forcing ) THEN
	1383	CALL subsidence( i, j, tend, s, s_init, 3 )
	1384	ENDIF
	1385
[3684]	1386	CALL module_interface_actions( i, j, 's-tendency' )
[1960]	1387
	1388	!
	1389	!-- Prognostic equation for scalar
[2232]	1390	DO k = nzb+1, nzt
	1391	s_p(k,j,i) = s(k,j,i) + ( dt_3d * &
	1392	( tsc(2) * tend(k,j,i) + &
	1393	tsc(3) * ts_m(k,j,i) ) &
	1394	- tsc(5) * rdf_sc(k) &
	1395	* ( s(k,j,i) - s_init(k) )&
	1396	) &
	1397	* MERGE( 1.0_wp, 0.0_wp, &
	1398	BTEST( wall_flags_0(k,j,i), 0 )&
	1399	)
[1960]	1400	IF ( s_p(k,j,i) < 0.0_wp ) s_p(k,j,i) = 0.1_wp * s(k,j,i)
	1401	ENDDO
	1402
	1403	!
	1404	!-- Calculate tendencies for the next Runge-Kutta step
	1405	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1406	IF ( intermediate_timestep_count == 1 ) THEN
[2232]	1407	DO k = nzb+1, nzt
[1960]	1408	ts_m(k,j,i) = tend(k,j,i)
	1409	ENDDO
	1410	ELSEIF ( intermediate_timestep_count < &
	1411	intermediate_timestep_count_max ) THEN
[2232]	1412	DO k = nzb+1, nzt
	1413	ts_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	1414	5.3125_wp * ts_m(k,j,i)
[1960]	1415	ENDDO
	1416	ENDIF
	1417	ENDIF
	1418
[2155]	1419	ENDIF
[1960]	1420	!
[2696]	1421	!-- Calculate prognostic equations for turbulence closure
[3386]	1422	CALL tcm_prognostic_equations( i, j, i_omp_start, tn )
[3837]	1423	!
	1424	!-- Calculate prognostic equations for all other modules
	1425	CALL module_interface_prognostic_equations( i, j, i_omp_start, tn )
[1875]	1426
	1427	!
[3294]	1428	!-- Calculate prognostic equation for chemical quantites
[2696]	1429	IF ( air_chemistry ) THEN
[3294]	1430	!> TODO: remove time measurement since it slows down performance because it will be called extremely often
[1875]	1431	!
[2696]	1432	!-- Loop over chemical species
[2815]	1433	DO lsp = 1, nvar
[3294]	1434	CALL chem_prognostic_equations( chem_species(lsp)%conc_p, &
[2696]	1435	chem_species(lsp)%conc, &
	1436	chem_species(lsp)%tconc_m, &
	1437	chem_species(lsp)%conc_pr_init, &
	1438	i, j, i_omp_start, tn, lsp, &
	1439	chem_species(lsp)%flux_s_cs, &
	1440	chem_species(lsp)%diss_s_cs, &
	1441	chem_species(lsp)%flux_l_cs, &
	1442	chem_species(lsp)%diss_l_cs )
[1875]	1443	ENDDO
[3467]	1444
[3294]	1445	ENDIF ! Chemical equations
	1446	!
	1447	!-- Calculate prognostic equations for the ocean
	1448	IF ( ocean_mode ) THEN
	1449	CALL ocean_prognostic_equations( i, j, i_omp_start, tn )
	1450	ENDIF
[3467]	1451
	1452	IF ( salsa ) THEN
	1453	!
	1454	!-- Loop over aerosol size bins: number and mass bins
	1455	IF ( time_since_reference_point >= skip_time_do_salsa ) THEN
	1456
	1457	DO b = 1, nbins
	1458	sums_salsa_ws_l = aerosol_number(b)%sums_ws_l
	1459	CALL salsa_tendency( 'aerosol_number', &
	1460	aerosol_number(b)%conc_p, &
	1461	aerosol_number(b)%conc, &
	1462	aerosol_number(b)%tconc_m, &
	1463	i, j, i_omp_start, tn, b, b, &
	1464	aerosol_number(b)%flux_s, &
	1465	aerosol_number(b)%diss_s, &
	1466	aerosol_number(b)%flux_l, &
	1467	aerosol_number(b)%diss_l, &
	1468	aerosol_number(b)%init )
	1469	aerosol_number(b)%sums_ws_l = sums_salsa_ws_l
	1470	DO c = 1, ncc_tot
	1471	sums_salsa_ws_l = aerosol_mass((c-1)*nbins+b)%sums_ws_l
	1472	CALL salsa_tendency( 'aerosol_mass', &
	1473	aerosol_mass((c-1)*nbins+b)%conc_p,&
	1474	aerosol_mass((c-1)*nbins+b)%conc, &
	1475	aerosol_mass((c-1)*nbins+b)%tconc_m,&
	1476	i, j, i_omp_start, tn, b, c, &
	1477	aerosol_mass((c-1)*nbins+b)%flux_s,&
	1478	aerosol_mass((c-1)*nbins+b)%diss_s,&
	1479	aerosol_mass((c-1)*nbins+b)%flux_l,&
	1480	aerosol_mass((c-1)*nbins+b)%diss_l,&
	1481	aerosol_mass((c-1)*nbins+b)%init )
	1482	aerosol_mass((c-1)*nbins+b)%sums_ws_l = sums_salsa_ws_l
	1483	ENDDO
	1484	ENDDO
	1485	IF ( .NOT. salsa_gases_from_chem ) THEN
	1486	DO g = 1, ngast
	1487	sums_salsa_ws_l = salsa_gas(g)%sums_ws_l
	1488	CALL salsa_tendency( 'salsa_gas', salsa_gas(g)%conc_p, &
	1489	salsa_gas(g)%conc, salsa_gas(g)%tconc_m, &
	1490	i, j, i_omp_start, tn, g, g, &
	1491	salsa_gas(g)%flux_s, salsa_gas(g)%diss_s,&
	1492	salsa_gas(g)%flux_l, salsa_gas(g)%diss_l,&
	1493	salsa_gas(g)%init )
	1494	salsa_gas(g)%sums_ws_l = sums_salsa_ws_l
	1495	ENDDO
	1496	ENDIF
	1497
	1498	ENDIF
	1499
	1500	ENDIF
[1875]	1501
[3294]	1502	ENDDO ! loop over j
	1503	ENDDO ! loop over i
[2192]	1504	!$OMP END PARALLEL
[1875]	1505
[2232]	1506
[1875]	1507	CALL cpu_log( log_point(32), 'all progn.equations', 'stop' )
	1508
	1509
	1510	END SUBROUTINE prognostic_equations_cache
	1511
	1512
	1513	!------------------------------------------------------------------------------!
	1514	! Description:
	1515	! ------------
	1516	!> Version for vector machines
	1517	!------------------------------------------------------------------------------!
[2155]	1518
[1875]	1519	SUBROUTINE prognostic_equations_vector
	1520
	1521
	1522	IMPLICIT NONE
	1523
[3467]	1524	INTEGER(iwp) :: b !< index for aerosol size bins (salsa)
	1525	INTEGER(iwp) :: c !< index for chemical compounds (salsa)
	1526	INTEGER(iwp) :: g !< index for gaseous compounds (salsa)
[2815]	1527	INTEGER(iwp) :: i !<
	1528	INTEGER(iwp) :: j !<
	1529	INTEGER(iwp) :: k !<
	1530	INTEGER(iwp) :: lsp !< running index for chemical species
[1875]	1531
	1532	REAL(wp) :: sbt !<
	1533
[3467]	1534	!
	1535	!-- Run SALSA and aerosol dynamic processes. SALSA is run with a longer time
	1536	!-- step. The exchange of ghost points is required after this update of the
	1537	!-- concentrations of aerosol number and mass
	1538	IF ( salsa ) THEN
	1539
	1540	IF ( time_since_reference_point >= skip_time_do_salsa ) THEN
	1541
	1542	IF ( ( time_since_reference_point - last_salsa_time ) >= dt_salsa ) &
	1543	THEN
	1544
	1545	CALL cpu_log( log_point_s(90), 'salsa processes ', 'start' )
	1546	!$OMP PARALLEL PRIVATE (i,j,b,c,g)
	1547	!$OMP DO
	1548	!
	1549	!-- Call salsa processes
	1550	DO i = nxl, nxr
	1551	DO j = nys, nyn
	1552	CALL salsa_diagnostics( i, j )
	1553	CALL salsa_driver( i, j, 3 )
	1554	CALL salsa_diagnostics( i, j )
	1555	ENDDO
	1556	ENDDO
	1557
	1558	CALL cpu_log( log_point_s(90), 'salsa processes ', 'stop' )
	1559
	1560	CALL cpu_log( log_point_s(91), 'salsa exch-horiz ', 'start' )
	1561	!
	1562	!-- Exchange ghost points and decycle if needed.
	1563	DO b = 1, nbins
	1564	CALL exchange_horiz( aerosol_number(b)%conc, nbgp )
	1565	CALL salsa_boundary_conds( aerosol_number(b)%conc_p, &
	1566	aerosol_number(b)%init )
	1567	DO c = 1, ncc_tot
	1568	CALL exchange_horiz( aerosol_mass((c-1)*nbins+b)%conc, nbgp )
	1569	CALL salsa_boundary_conds( &
	1570	aerosol_mass((c-1)*nbins+b)%conc_p, &
	1571	aerosol_mass((c-1)*nbins+b)%init )
	1572	ENDDO
	1573	ENDDO
	1574
	1575	IF ( .NOT. salsa_gases_from_chem ) THEN
	1576	DO g = 1, ngast
	1577	CALL exchange_horiz( salsa_gas(g)%conc, nbgp )
	1578	CALL salsa_boundary_conds( salsa_gas(g)%conc_p, &
	1579	salsa_gas(g)%init )
	1580	ENDDO
	1581	ENDIF
	1582	CALL cpu_log( log_point_s(91), 'salsa exch-horiz ', 'stop' )
	1583
	1584	!$OMP END PARALLEL
	1585	last_salsa_time = time_since_reference_point
	1586
	1587	ENDIF
	1588
	1589	ENDIF
	1590
	1591	ENDIF
[1875]	1592
	1593	!
	1594	!-- If required, calculate cloud microphysical impacts
[3274]	1595	IF ( bulk_cloud_model .AND. .NOT. microphysics_sat_adjust .AND. &
[1875]	1596	( intermediate_timestep_count == 1 .OR. &
	1597	call_microphysics_at_all_substeps ) &
	1598	) THEN
	1599	CALL cpu_log( log_point(51), 'microphysics', 'start' )
[3274]	1600	CALL bcm_actions
[1875]	1601	CALL cpu_log( log_point(51), 'microphysics', 'stop' )
	1602	ENDIF
	1603
	1604	!
	1605	!-- u-velocity component
	1606	CALL cpu_log( log_point(5), 'u-equation', 'start' )
	1607
[3634]	1608	!$ACC KERNELS PRESENT(tend)
[1875]	1609	tend = 0.0_wp
[3634]	1610	!$ACC END KERNELS
[1875]	1611	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1612	IF ( ws_scheme_mom ) THEN
	1613	CALL advec_u_ws
	1614	ELSE
	1615	CALL advec_u_pw
	1616	ENDIF
	1617	ELSE
	1618	CALL advec_u_up
	1619	ENDIF
	1620	CALL diffusion_u
	1621	CALL coriolis( 1 )
	1622	IF ( sloping_surface .AND. .NOT. neutral ) THEN
	1623	CALL buoyancy( pt, 1 )
	1624	ENDIF
	1625
	1626	!
	1627	!-- Drag by plant canopy
	1628	IF ( plant_canopy ) CALL pcm_tendency( 1 )
	1629
	1630	!
	1631	!-- External pressure gradient
	1632	IF ( dp_external ) THEN
	1633	DO i = nxlu, nxr
	1634	DO j = nys, nyn
	1635	DO k = dp_level_ind_b+1, nzt
	1636	tend(k,j,i) = tend(k,j,i) - dpdxy(1) * dp_smooth_factor(k)
	1637	ENDDO
	1638	ENDDO
	1639	ENDDO
	1640	ENDIF
	1641
	1642	!
	1643	!-- Nudging
	1644	IF ( nudging ) CALL nudge( simulated_time, 'u' )
	1645
[1914]	1646	!
[3302]	1647	!-- Effect of Stokes drift (in ocean mode only)
	1648	IF ( stokes_force ) CALL stokes_drift_terms( 1 )
	1649
	1650	!
[1914]	1651	!-- Forces by wind turbines
	1652	IF ( wind_turbine ) CALL wtm_tendencies( 1 )
	1653
[3684]	1654	CALL module_interface_actions( 'u-tendency' )
[1875]	1655
	1656	!
	1657	!-- Prognostic equation for u-velocity component
[3634]	1658	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1659	!$ACC PRESENT(u, tend, tu_m, u_init, rdf, wall_flags_0) &
	1660	!$ACC PRESENT(tsc(2:5)) &
	1661	!$ACC PRESENT(u_p)
[1875]	1662	DO i = nxlu, nxr
	1663	DO j = nys, nyn
[2232]	1664	DO k = nzb+1, nzt
	1665	u_p(k,j,i) = u(k,j,i) + ( dt_3d * ( tsc(2) * tend(k,j,i) + &
	1666	tsc(3) * tu_m(k,j,i) ) &
	1667	- tsc(5) * rdf(k) * &
	1668	( u(k,j,i) - u_init(k) ) &
	1669	) * MERGE( 1.0_wp, 0.0_wp, &
	1670	BTEST( wall_flags_0(k,j,i), 1 ) &
	1671	)
[1875]	1672	ENDDO
	1673	ENDDO
	1674	ENDDO
	1675
	1676	!
[3302]	1677	!-- Add turbulence generated by wave breaking (in ocean mode only)
	1678	IF ( wave_breaking .AND. &
	1679	intermediate_timestep_count == intermediate_timestep_count_max ) &
	1680	THEN
	1681	CALL wave_breaking_term( 1 )
	1682	ENDIF
	1683
	1684	!
[1875]	1685	!-- Calculate tendencies for the next Runge-Kutta step
	1686	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1687	IF ( intermediate_timestep_count == 1 ) THEN
[3634]	1688	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1689	!$ACC PRESENT(tend, tu_m)
[1875]	1690	DO i = nxlu, nxr
	1691	DO j = nys, nyn
[2232]	1692	DO k = nzb+1, nzt
[1875]	1693	tu_m(k,j,i) = tend(k,j,i)
	1694	ENDDO
	1695	ENDDO
	1696	ENDDO
	1697	ELSEIF ( intermediate_timestep_count < &
	1698	intermediate_timestep_count_max ) THEN
[3634]	1699	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1700	!$ACC PRESENT(tend, tu_m)
[1875]	1701	DO i = nxlu, nxr
	1702	DO j = nys, nyn
[2232]	1703	DO k = nzb+1, nzt
	1704	tu_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	1705	+ 5.3125_wp * tu_m(k,j,i)
[1875]	1706	ENDDO
	1707	ENDDO
	1708	ENDDO
	1709	ENDIF
	1710	ENDIF
	1711
	1712	CALL cpu_log( log_point(5), 'u-equation', 'stop' )
	1713
	1714	!
	1715	!-- v-velocity component
	1716	CALL cpu_log( log_point(6), 'v-equation', 'start' )
	1717
[3634]	1718	!$ACC KERNELS PRESENT(tend)
[1875]	1719	tend = 0.0_wp
[3634]	1720	!$ACC END KERNELS
[1875]	1721	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1722	IF ( ws_scheme_mom ) THEN
	1723	CALL advec_v_ws
[2155]	1724	ELSE
[1875]	1725	CALL advec_v_pw
	1726	END IF
	1727	ELSE
	1728	CALL advec_v_up
	1729	ENDIF
	1730	CALL diffusion_v
	1731	CALL coriolis( 2 )
	1732
	1733	!
	1734	!-- Drag by plant canopy
	1735	IF ( plant_canopy ) CALL pcm_tendency( 2 )
	1736
	1737	!
	1738	!-- External pressure gradient
	1739	IF ( dp_external ) THEN
	1740	DO i = nxl, nxr
	1741	DO j = nysv, nyn
	1742	DO k = dp_level_ind_b+1, nzt
	1743	tend(k,j,i) = tend(k,j,i) - dpdxy(2) * dp_smooth_factor(k)
	1744	ENDDO
	1745	ENDDO
	1746	ENDDO
	1747	ENDIF
	1748
	1749	!
	1750	!-- Nudging
	1751	IF ( nudging ) CALL nudge( simulated_time, 'v' )
	1752
[1914]	1753	!
[3302]	1754	!-- Effect of Stokes drift (in ocean mode only)
	1755	IF ( stokes_force ) CALL stokes_drift_terms( 2 )
	1756
	1757	!
[1914]	1758	!-- Forces by wind turbines
	1759	IF ( wind_turbine ) CALL wtm_tendencies( 2 )
	1760
[3684]	1761	CALL module_interface_actions( 'v-tendency' )
[1875]	1762
	1763	!
	1764	!-- Prognostic equation for v-velocity component
[3634]	1765	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1766	!$ACC PRESENT(v, tend, tv_m, v_init, rdf, wall_flags_0) &
	1767	!$ACC PRESENT(tsc(2:5)) &
	1768	!$ACC PRESENT(v_p)
[1875]	1769	DO i = nxl, nxr
	1770	DO j = nysv, nyn
[2232]	1771	DO k = nzb+1, nzt
	1772	v_p(k,j,i) = v(k,j,i) + ( dt_3d * ( tsc(2) * tend(k,j,i) + &
	1773	tsc(3) * tv_m(k,j,i) ) &
	1774	- tsc(5) * rdf(k) * &
	1775	( v(k,j,i) - v_init(k) ) &
	1776	) * MERGE( 1.0_wp, 0.0_wp, &
	1777	BTEST( wall_flags_0(k,j,i), 2 )&
	1778	)
[1875]	1779	ENDDO
	1780	ENDDO
	1781	ENDDO
	1782
	1783	!
[3302]	1784	!-- Add turbulence generated by wave breaking (in ocean mode only)
	1785	IF ( wave_breaking .AND. &
	1786	intermediate_timestep_count == intermediate_timestep_count_max ) &
	1787	THEN
	1788	CALL wave_breaking_term( 2 )
	1789	ENDIF
	1790
	1791	!
[1875]	1792	!-- Calculate tendencies for the next Runge-Kutta step
	1793	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1794	IF ( intermediate_timestep_count == 1 ) THEN
[3634]	1795	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1796	!$ACC PRESENT(tend, tv_m)
[1875]	1797	DO i = nxl, nxr
	1798	DO j = nysv, nyn
[2232]	1799	DO k = nzb+1, nzt
[1875]	1800	tv_m(k,j,i) = tend(k,j,i)
	1801	ENDDO
	1802	ENDDO
	1803	ENDDO
	1804	ELSEIF ( intermediate_timestep_count < &
	1805	intermediate_timestep_count_max ) THEN
[3634]	1806	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1807	!$ACC PRESENT(tend, tv_m)
[1875]	1808	DO i = nxl, nxr
	1809	DO j = nysv, nyn
[2232]	1810	DO k = nzb+1, nzt
	1811	tv_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	1812	+ 5.3125_wp * tv_m(k,j,i)
[1875]	1813	ENDDO
	1814	ENDDO
	1815	ENDDO
	1816	ENDIF
	1817	ENDIF
	1818
	1819	CALL cpu_log( log_point(6), 'v-equation', 'stop' )
	1820
	1821	!
	1822	!-- w-velocity component
	1823	CALL cpu_log( log_point(7), 'w-equation', 'start' )
	1824
[3634]	1825	!$ACC KERNELS PRESENT(tend)
[1875]	1826	tend = 0.0_wp
[3634]	1827	!$ACC END KERNELS
[1875]	1828	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1829	IF ( ws_scheme_mom ) THEN
	1830	CALL advec_w_ws
	1831	ELSE
	1832	CALL advec_w_pw
	1833	ENDIF
	1834	ELSE
	1835	CALL advec_w_up
	1836	ENDIF
	1837	CALL diffusion_w
	1838	CALL coriolis( 3 )
	1839
	1840	IF ( .NOT. neutral ) THEN
[3294]	1841	IF ( ocean_mode ) THEN
[2031]	1842	CALL buoyancy( rho_ocean, 3 )
[1875]	1843	ELSE
	1844	IF ( .NOT. humidity ) THEN
	1845	CALL buoyancy( pt, 3 )
	1846	ELSE
	1847	CALL buoyancy( vpt, 3 )
	1848	ENDIF
	1849	ENDIF
	1850	ENDIF
	1851
	1852	!
	1853	!-- Drag by plant canopy
	1854	IF ( plant_canopy ) CALL pcm_tendency( 3 )
	1855
[1914]	1856	!
[3302]	1857	!-- Effect of Stokes drift (in ocean mode only)
	1858	IF ( stokes_force ) CALL stokes_drift_terms( 3 )
	1859
	1860	!
[1914]	1861	!-- Forces by wind turbines
	1862	IF ( wind_turbine ) CALL wtm_tendencies( 3 )
	1863
[3684]	1864	CALL module_interface_actions( 'w-tendency' )
[1875]	1865
	1866	!
	1867	!-- Prognostic equation for w-velocity component
[3634]	1868	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1869	!$ACC PRESENT(w, tend, tw_m, v_init, rdf, wall_flags_0) &
	1870	!$ACC PRESENT(tsc(2:5)) &
	1871	!$ACC PRESENT(w_p)
[1875]	1872	DO i = nxl, nxr
	1873	DO j = nys, nyn
[2232]	1874	DO k = nzb+1, nzt-1
	1875	w_p(k,j,i) = w(k,j,i) + ( dt_3d * ( tsc(2) * tend(k,j,i) + &
	1876	tsc(3) * tw_m(k,j,i) ) &
	1877	- tsc(5) * rdf(k) * w(k,j,i) &
	1878	) * MERGE( 1.0_wp, 0.0_wp, &
	1879	BTEST( wall_flags_0(k,j,i), 3 )&
	1880	)
[1875]	1881	ENDDO
	1882	ENDDO
	1883	ENDDO
	1884
	1885	!
	1886	!-- Calculate tendencies for the next Runge-Kutta step
	1887	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1888	IF ( intermediate_timestep_count == 1 ) THEN
[3634]	1889	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1890	!$ACC PRESENT(tend, tw_m)
[1875]	1891	DO i = nxl, nxr
	1892	DO j = nys, nyn
[2232]	1893	DO k = nzb+1, nzt-1
[1875]	1894	tw_m(k,j,i) = tend(k,j,i)
	1895	ENDDO
	1896	ENDDO
	1897	ENDDO
	1898	ELSEIF ( intermediate_timestep_count < &
	1899	intermediate_timestep_count_max ) THEN
[3634]	1900	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	1901	!$ACC PRESENT(tend, tw_m)
[1875]	1902	DO i = nxl, nxr
	1903	DO j = nys, nyn
[2232]	1904	DO k = nzb+1, nzt-1
	1905	tw_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	1906	+ 5.3125_wp * tw_m(k,j,i)
[1875]	1907	ENDDO
	1908	ENDDO
	1909	ENDDO
	1910	ENDIF
	1911	ENDIF
	1912
	1913	CALL cpu_log( log_point(7), 'w-equation', 'stop' )
	1914
	1915
	1916	!
	1917	!-- If required, compute prognostic equation for potential temperature
	1918	IF ( .NOT. neutral ) THEN
	1919
	1920	CALL cpu_log( log_point(13), 'pt-equation', 'start' )
	1921
	1922	!
	1923	!-- pt-tendency terms with communication
	1924	sbt = tsc(2)
	1925	IF ( scalar_advec == 'bc-scheme' ) THEN
	1926
	1927	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	1928	!
	1929	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	1930	sbt = 1.0_wp
	1931	ENDIF
	1932	tend = 0.0_wp
	1933	CALL advec_s_bc( pt, 'pt' )
	1934
	1935	ENDIF
	1936
	1937	!
	1938	!-- pt-tendency terms with no communication
	1939	IF ( scalar_advec /= 'bc-scheme' ) THEN
[3634]	1940	!$ACC KERNELS PRESENT(tend)
[1875]	1941	tend = 0.0_wp
[3634]	1942	!$ACC END KERNELS
[1875]	1943	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	1944	IF ( ws_scheme_sca ) THEN
	1945	CALL advec_s_ws( pt, 'pt' )
	1946	ELSE
	1947	CALL advec_s_pw( pt )
	1948	ENDIF
	1949	ELSE
	1950	CALL advec_s_up( pt )
	1951	ENDIF
	1952	ENDIF
	1953
[2232]	1954	CALL diffusion_s( pt, &
	1955	surf_def_h(0)%shf, surf_def_h(1)%shf, &
	1956	surf_def_h(2)%shf, &
	1957	surf_lsm_h%shf, surf_usm_h%shf, &
	1958	surf_def_v(0)%shf, surf_def_v(1)%shf, &
	1959	surf_def_v(2)%shf, surf_def_v(3)%shf, &
	1960	surf_lsm_v(0)%shf, surf_lsm_v(1)%shf, &
	1961	surf_lsm_v(2)%shf, surf_lsm_v(3)%shf, &
	1962	surf_usm_v(0)%shf, surf_usm_v(1)%shf, &
	1963	surf_usm_v(2)%shf, surf_usm_v(3)%shf )
[1875]	1964
	1965	!
	1966	!-- Consideration of heat sources within the plant canopy
[3014]	1967	IF ( plant_canopy .AND. &
	1968	(cthf /= 0.0_wp .OR. urban_surface .OR. land_surface) ) THEN
[1875]	1969	CALL pcm_tendency( 4 )
	1970	ENDIF
	1971
	1972	!
	1973	!-- Large scale advection
	1974	IF ( large_scale_forcing ) THEN
	1975	CALL ls_advec( simulated_time, 'pt' )
	1976	ENDIF
	1977
	1978	!
	1979	!-- Nudging
[2155]	1980	IF ( nudging ) CALL nudge( simulated_time, 'pt' )
[1875]	1981
	1982	!
	1983	!-- If required compute influence of large-scale subsidence/ascent
	1984	IF ( large_scale_subsidence .AND. &
	1985	.NOT. use_subsidence_tendencies ) THEN
	1986	CALL subsidence( tend, pt, pt_init, 2 )
	1987	ENDIF
	1988
[3771]	1989	#if defined( __rrtmg )
[1875]	1990	!
	1991	!-- If required, add tendency due to radiative heating/cooling
[1976]	1992	IF ( radiation .AND. &
[1875]	1993	simulated_time > skip_time_do_radiation ) THEN
	1994	CALL radiation_tendency ( tend )
	1995	ENDIF
[3771]	1996	#endif
[1875]	1997
[3684]	1998	CALL module_interface_actions( 'pt-tendency' )
[1875]	1999
	2000	!
	2001	!-- Prognostic equation for potential temperature
[3634]	2002	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	2003	!$ACC PRESENT(pt, tend, tpt_m, wall_flags_0) &
	2004	!$ACC PRESENT(pt_init, rdf_sc, ptdf_x, ptdf_y) &
	2005	!$ACC PRESENT(tsc(3:5)) &
	2006	!$ACC PRESENT(pt_p)
[1875]	2007	DO i = nxl, nxr
	2008	DO j = nys, nyn
[2232]	2009	DO k = nzb+1, nzt
	2010	pt_p(k,j,i) = pt(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2011	tsc(3) * tpt_m(k,j,i) ) &
	2012	- tsc(5) * &
	2013	( pt(k,j,i) - pt_init(k) ) *&
	2014	( rdf_sc(k) + ptdf_x(i) + ptdf_y(j) )&
	2015	) &
	2016	* MERGE( 1.0_wp, 0.0_wp, &
	2017	BTEST( wall_flags_0(k,j,i), 0 ) &
	2018	)
[1875]	2019	ENDDO
	2020	ENDDO
	2021	ENDDO
	2022	!
	2023	!-- Calculate tendencies for the next Runge-Kutta step
	2024	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2025	IF ( intermediate_timestep_count == 1 ) THEN
[3634]	2026	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	2027	!$ACC PRESENT(tend, tpt_m)
[1875]	2028	DO i = nxl, nxr
	2029	DO j = nys, nyn
[2232]	2030	DO k = nzb+1, nzt
[1875]	2031	tpt_m(k,j,i) = tend(k,j,i)
	2032	ENDDO
	2033	ENDDO
	2034	ENDDO
	2035	ELSEIF ( intermediate_timestep_count < &
	2036	intermediate_timestep_count_max ) THEN
[3634]	2037	!$ACC PARALLEL LOOP COLLAPSE(3) PRIVATE(i, j, k) &
	2038	!$ACC PRESENT(tend, tpt_m)
[1875]	2039	DO i = nxl, nxr
	2040	DO j = nys, nyn
[2232]	2041	DO k = nzb+1, nzt
	2042	tpt_m(k,j,i) = -9.5625_wp * tend(k,j,i) + &
	2043	5.3125_wp * tpt_m(k,j,i)
[1875]	2044	ENDDO
	2045	ENDDO
	2046	ENDDO
	2047	ENDIF
	2048	ENDIF
	2049
	2050	CALL cpu_log( log_point(13), 'pt-equation', 'stop' )
	2051
	2052	ENDIF
	2053
	2054	!
[1960]	2055	!-- If required, compute prognostic equation for total water content
	2056	IF ( humidity ) THEN
[1875]	2057
[1960]	2058	CALL cpu_log( log_point(29), 'q-equation', 'start' )
[1875]	2059
	2060	!
	2061	!-- Scalar/q-tendency terms with communication
	2062	sbt = tsc(2)
	2063	IF ( scalar_advec == 'bc-scheme' ) THEN
	2064
	2065	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2066	!
	2067	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2068	sbt = 1.0_wp
	2069	ENDIF
	2070	tend = 0.0_wp
	2071	CALL advec_s_bc( q, 'q' )
	2072
	2073	ENDIF
	2074
	2075	!
	2076	!-- Scalar/q-tendency terms with no communication
	2077	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2078	tend = 0.0_wp
	2079	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2080	IF ( ws_scheme_sca ) THEN
	2081	CALL advec_s_ws( q, 'q' )
	2082	ELSE
	2083	CALL advec_s_pw( q )
	2084	ENDIF
	2085	ELSE
	2086	CALL advec_s_up( q )
	2087	ENDIF
	2088	ENDIF
	2089
[2232]	2090	CALL diffusion_s( q, &
	2091	surf_def_h(0)%qsws, surf_def_h(1)%qsws, &
	2092	surf_def_h(2)%qsws, &
	2093	surf_lsm_h%qsws, surf_usm_h%qsws, &
	2094	surf_def_v(0)%qsws, surf_def_v(1)%qsws, &
	2095	surf_def_v(2)%qsws, surf_def_v(3)%qsws, &
	2096	surf_lsm_v(0)%qsws, surf_lsm_v(1)%qsws, &
	2097	surf_lsm_v(2)%qsws, surf_lsm_v(3)%qsws, &
	2098	surf_usm_v(0)%qsws, surf_usm_v(1)%qsws, &
	2099	surf_usm_v(2)%qsws, surf_usm_v(3)%qsws )
[2155]	2100
[1875]	2101	!
[1960]	2102	!-- Sink or source of humidity due to canopy elements
[1875]	2103	IF ( plant_canopy ) CALL pcm_tendency( 5 )
	2104
	2105	!
	2106	!-- Large scale advection
	2107	IF ( large_scale_forcing ) THEN
	2108	CALL ls_advec( simulated_time, 'q' )
	2109	ENDIF
	2110
	2111	!
	2112	!-- Nudging
[2155]	2113	IF ( nudging ) CALL nudge( simulated_time, 'q' )
[1875]	2114
	2115	!
	2116	!-- If required compute influence of large-scale subsidence/ascent
	2117	IF ( large_scale_subsidence .AND. &
	2118	.NOT. use_subsidence_tendencies ) THEN
	2119	CALL subsidence( tend, q, q_init, 3 )
	2120	ENDIF
	2121
[3684]	2122	CALL module_interface_actions( 'q-tendency' )
[1875]	2123
	2124	!
[1960]	2125	!-- Prognostic equation for total water content
[1875]	2126	DO i = nxl, nxr
	2127	DO j = nys, nyn
[2232]	2128	DO k = nzb+1, nzt
	2129	q_p(k,j,i) = q(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2130	tsc(3) * tq_m(k,j,i) ) &
	2131	- tsc(5) * rdf_sc(k) * &
	2132	( q(k,j,i) - q_init(k) ) &
	2133	) * MERGE( 1.0_wp, 0.0_wp, &
	2134	BTEST( wall_flags_0(k,j,i), 0 ) &
	2135	)
[1875]	2136	IF ( q_p(k,j,i) < 0.0_wp ) q_p(k,j,i) = 0.1_wp * q(k,j,i)
	2137	ENDDO
	2138	ENDDO
	2139	ENDDO
	2140
	2141	!
	2142	!-- Calculate tendencies for the next Runge-Kutta step
	2143	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2144	IF ( intermediate_timestep_count == 1 ) THEN
	2145	DO i = nxl, nxr
	2146	DO j = nys, nyn
[2232]	2147	DO k = nzb+1, nzt
[1875]	2148	tq_m(k,j,i) = tend(k,j,i)
	2149	ENDDO
	2150	ENDDO
	2151	ENDDO
	2152	ELSEIF ( intermediate_timestep_count < &
	2153	intermediate_timestep_count_max ) THEN
	2154	DO i = nxl, nxr
	2155	DO j = nys, nyn
[2232]	2156	DO k = nzb+1, nzt
	2157	tq_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2158	+ 5.3125_wp * tq_m(k,j,i)
[1875]	2159	ENDDO
	2160	ENDDO
	2161	ENDDO
	2162	ENDIF
	2163	ENDIF
	2164
[1960]	2165	CALL cpu_log( log_point(29), 'q-equation', 'stop' )
[1875]	2166
	2167	!
[2292]	2168	!-- If required, calculate prognostic equations for cloud water content
	2169	!-- and cloud drop concentration
[3274]	2170	IF ( bulk_cloud_model .AND. microphysics_morrison ) THEN
[2292]	2171
	2172	CALL cpu_log( log_point(67), 'qc-equation', 'start' )
	2173
	2174	!
	2175	!-- Calculate prognostic equation for cloud water content
	2176	sbt = tsc(2)
	2177	IF ( scalar_advec == 'bc-scheme' ) THEN
	2178
	2179	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2180	!
	2181	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2182	sbt = 1.0_wp
	2183	ENDIF
	2184	tend = 0.0_wp
	2185	CALL advec_s_bc( qc, 'qc' )
	2186
	2187	ENDIF
	2188
	2189	!
	2190	!-- qc-tendency terms with no communication
	2191	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2192	tend = 0.0_wp
	2193	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2194	IF ( ws_scheme_sca ) THEN
	2195	CALL advec_s_ws( qc, 'qc' )
	2196	ELSE
	2197	CALL advec_s_pw( qc )
	2198	ENDIF
	2199	ELSE
	2200	CALL advec_s_up( qc )
	2201	ENDIF
	2202	ENDIF
	2203
	2204	CALL diffusion_s( qc, &
	2205	surf_def_h(0)%qcsws, surf_def_h(1)%qcsws, &
	2206	surf_def_h(2)%qcsws, &
	2207	surf_lsm_h%qcsws, surf_usm_h%qcsws, &
	2208	surf_def_v(0)%qcsws, surf_def_v(1)%qcsws, &
	2209	surf_def_v(2)%qcsws, surf_def_v(3)%qcsws, &
	2210	surf_lsm_v(0)%qcsws, surf_lsm_v(1)%qcsws, &
	2211	surf_lsm_v(2)%qcsws, surf_lsm_v(3)%qcsws, &
	2212	surf_usm_v(0)%qcsws, surf_usm_v(1)%qcsws, &
	2213	surf_usm_v(2)%qcsws, surf_usm_v(3)%qcsws )
	2214
	2215	!
	2216	!-- Prognostic equation for cloud water content
	2217	DO i = nxl, nxr
	2218	DO j = nys, nyn
	2219	DO k = nzb+1, nzt
	2220	qc_p(k,j,i) = qc(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2221	tsc(3) * tqc_m(k,j,i) ) &
	2222	- tsc(5) * rdf_sc(k) * &
	2223	qc(k,j,i) &
	2224	) &
	2225	* MERGE( 1.0_wp, 0.0_wp, &
	2226	BTEST( wall_flags_0(k,j,i), 0 ) &
	2227	)
	2228	IF ( qc_p(k,j,i) < 0.0_wp ) qc_p(k,j,i) = 0.0_wp
	2229	ENDDO
	2230	ENDDO
	2231	ENDDO
	2232
	2233	!
	2234	!-- Calculate tendencies for the next Runge-Kutta step
	2235	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2236	IF ( intermediate_timestep_count == 1 ) THEN
	2237	DO i = nxl, nxr
	2238	DO j = nys, nyn
	2239	DO k = nzb+1, nzt
	2240	tqc_m(k,j,i) = tend(k,j,i)
	2241	ENDDO
	2242	ENDDO
	2243	ENDDO
	2244	ELSEIF ( intermediate_timestep_count < &
	2245	intermediate_timestep_count_max ) THEN
	2246	DO i = nxl, nxr
	2247	DO j = nys, nyn
	2248	DO k = nzb+1, nzt
	2249	tqc_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2250	+ 5.3125_wp * tqc_m(k,j,i)
	2251	ENDDO
	2252	ENDDO
	2253	ENDDO
	2254	ENDIF
	2255	ENDIF
	2256
	2257	CALL cpu_log( log_point(67), 'qc-equation', 'stop' )
[3294]	2258
[2292]	2259	CALL cpu_log( log_point(68), 'nc-equation', 'start' )
	2260	!
	2261	!-- Calculate prognostic equation for cloud drop concentration
	2262	sbt = tsc(2)
	2263	IF ( scalar_advec == 'bc-scheme' ) THEN
	2264
	2265	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2266	!
	2267	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2268	sbt = 1.0_wp
	2269	ENDIF
	2270	tend = 0.0_wp
	2271	CALL advec_s_bc( nc, 'nc' )
	2272
	2273	ENDIF
	2274
	2275	!
	2276	!-- nc-tendency terms with no communication
	2277	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2278	tend = 0.0_wp
	2279	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2280	IF ( ws_scheme_sca ) THEN
	2281	CALL advec_s_ws( nc, 'nc' )
	2282	ELSE
	2283	CALL advec_s_pw( nc )
	2284	ENDIF
	2285	ELSE
	2286	CALL advec_s_up( nc )
	2287	ENDIF
	2288	ENDIF
	2289
	2290	CALL diffusion_s( nc, &
	2291	surf_def_h(0)%ncsws, surf_def_h(1)%ncsws, &
	2292	surf_def_h(2)%ncsws, &
	2293	surf_lsm_h%ncsws, surf_usm_h%ncsws, &
	2294	surf_def_v(0)%ncsws, surf_def_v(1)%ncsws, &
	2295	surf_def_v(2)%ncsws, surf_def_v(3)%ncsws, &
	2296	surf_lsm_v(0)%ncsws, surf_lsm_v(1)%ncsws, &
	2297	surf_lsm_v(2)%ncsws, surf_lsm_v(3)%ncsws, &
	2298	surf_usm_v(0)%ncsws, surf_usm_v(1)%ncsws, &
	2299	surf_usm_v(2)%ncsws, surf_usm_v(3)%ncsws )
	2300
	2301	!
	2302	!-- Prognostic equation for cloud drop concentration
	2303	DO i = nxl, nxr
	2304	DO j = nys, nyn
	2305	DO k = nzb+1, nzt
	2306	nc_p(k,j,i) = nc(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2307	tsc(3) * tnc_m(k,j,i) ) &
	2308	- tsc(5) * rdf_sc(k) * &
	2309	nc(k,j,i) &
	2310	) &
	2311	* MERGE( 1.0_wp, 0.0_wp, &
	2312	BTEST( wall_flags_0(k,j,i), 0 ) &
	2313	)
	2314	IF ( nc_p(k,j,i) < 0.0_wp ) nc_p(k,j,i) = 0.0_wp
	2315	ENDDO
	2316	ENDDO
	2317	ENDDO
	2318
	2319	!
	2320	!-- Calculate tendencies for the next Runge-Kutta step
	2321	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2322	IF ( intermediate_timestep_count == 1 ) THEN
	2323	DO i = nxl, nxr
	2324	DO j = nys, nyn
	2325	DO k = nzb+1, nzt
	2326	tnc_m(k,j,i) = tend(k,j,i)
	2327	ENDDO
	2328	ENDDO
	2329	ENDDO
	2330	ELSEIF ( intermediate_timestep_count < &
	2331	intermediate_timestep_count_max ) THEN
	2332	DO i = nxl, nxr
	2333	DO j = nys, nyn
	2334	DO k = nzb+1, nzt
	2335	tnc_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2336	+ 5.3125_wp * tnc_m(k,j,i)
	2337	ENDDO
	2338	ENDDO
	2339	ENDDO
	2340	ENDIF
	2341	ENDIF
	2342
	2343	CALL cpu_log( log_point(68), 'nc-equation', 'stop' )
	2344
	2345	ENDIF
	2346	!
[2155]	2347	!-- If required, calculate prognostic equations for rain water content
[1875]	2348	!-- and rain drop concentration
[3274]	2349	IF ( bulk_cloud_model .AND. microphysics_seifert ) THEN
[1875]	2350
	2351	CALL cpu_log( log_point(52), 'qr-equation', 'start' )
	2352
	2353	!
	2354	!-- Calculate prognostic equation for rain water content
	2355	sbt = tsc(2)
	2356	IF ( scalar_advec == 'bc-scheme' ) THEN
	2357
	2358	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2359	!
	2360	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2361	sbt = 1.0_wp
	2362	ENDIF
	2363	tend = 0.0_wp
	2364	CALL advec_s_bc( qr, 'qr' )
	2365
	2366	ENDIF
	2367
	2368	!
	2369	!-- qr-tendency terms with no communication
	2370	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2371	tend = 0.0_wp
	2372	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2373	IF ( ws_scheme_sca ) THEN
	2374	CALL advec_s_ws( qr, 'qr' )
	2375	ELSE
	2376	CALL advec_s_pw( qr )
	2377	ENDIF
	2378	ELSE
	2379	CALL advec_s_up( qr )
	2380	ENDIF
	2381	ENDIF
	2382
[2232]	2383	CALL diffusion_s( qr, &
	2384	surf_def_h(0)%qrsws, surf_def_h(1)%qrsws, &
	2385	surf_def_h(2)%qrsws, &
	2386	surf_lsm_h%qrsws, surf_usm_h%qrsws, &
	2387	surf_def_v(0)%qrsws, surf_def_v(1)%qrsws, &
	2388	surf_def_v(2)%qrsws, surf_def_v(3)%qrsws, &
	2389	surf_lsm_v(0)%qrsws, surf_lsm_v(1)%qrsws, &
	2390	surf_lsm_v(2)%qrsws, surf_lsm_v(3)%qrsws, &
	2391	surf_usm_v(0)%qrsws, surf_usm_v(1)%qrsws, &
	2392	surf_usm_v(2)%qrsws, surf_usm_v(3)%qrsws )
[1875]	2393
	2394	!
	2395	!-- Prognostic equation for rain water content
	2396	DO i = nxl, nxr
	2397	DO j = nys, nyn
[2232]	2398	DO k = nzb+1, nzt
	2399	qr_p(k,j,i) = qr(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2400	tsc(3) * tqr_m(k,j,i) ) &
	2401	- tsc(5) * rdf_sc(k) * &
	2402	qr(k,j,i) &
	2403	) &
	2404	* MERGE( 1.0_wp, 0.0_wp, &
	2405	BTEST( wall_flags_0(k,j,i), 0 ) &
	2406	)
[1875]	2407	IF ( qr_p(k,j,i) < 0.0_wp ) qr_p(k,j,i) = 0.0_wp
	2408	ENDDO
	2409	ENDDO
	2410	ENDDO
	2411
	2412	!
	2413	!-- Calculate tendencies for the next Runge-Kutta step
	2414	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2415	IF ( intermediate_timestep_count == 1 ) THEN
	2416	DO i = nxl, nxr
	2417	DO j = nys, nyn
[2232]	2418	DO k = nzb+1, nzt
[1875]	2419	tqr_m(k,j,i) = tend(k,j,i)
	2420	ENDDO
	2421	ENDDO
	2422	ENDDO
	2423	ELSEIF ( intermediate_timestep_count < &
	2424	intermediate_timestep_count_max ) THEN
	2425	DO i = nxl, nxr
	2426	DO j = nys, nyn
[2232]	2427	DO k = nzb+1, nzt
	2428	tqr_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2429	+ 5.3125_wp * tqr_m(k,j,i)
[1875]	2430	ENDDO
	2431	ENDDO
	2432	ENDDO
	2433	ENDIF
	2434	ENDIF
	2435
	2436	CALL cpu_log( log_point(52), 'qr-equation', 'stop' )
	2437	CALL cpu_log( log_point(53), 'nr-equation', 'start' )
	2438
	2439	!
	2440	!-- Calculate prognostic equation for rain drop concentration
	2441	sbt = tsc(2)
	2442	IF ( scalar_advec == 'bc-scheme' ) THEN
	2443
	2444	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2445	!
	2446	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2447	sbt = 1.0_wp
	2448	ENDIF
	2449	tend = 0.0_wp
	2450	CALL advec_s_bc( nr, 'nr' )
	2451
	2452	ENDIF
	2453
	2454	!
	2455	!-- nr-tendency terms with no communication
	2456	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2457	tend = 0.0_wp
	2458	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2459	IF ( ws_scheme_sca ) THEN
	2460	CALL advec_s_ws( nr, 'nr' )
	2461	ELSE
	2462	CALL advec_s_pw( nr )
	2463	ENDIF
	2464	ELSE
	2465	CALL advec_s_up( nr )
	2466	ENDIF
	2467	ENDIF
	2468
[2232]	2469	CALL diffusion_s( nr, &
	2470	surf_def_h(0)%nrsws, surf_def_h(1)%nrsws, &
	2471	surf_def_h(2)%nrsws, &
	2472	surf_lsm_h%nrsws, surf_usm_h%nrsws, &
	2473	surf_def_v(0)%nrsws, surf_def_v(1)%nrsws, &
	2474	surf_def_v(2)%nrsws, surf_def_v(3)%nrsws, &
	2475	surf_lsm_v(0)%nrsws, surf_lsm_v(1)%nrsws, &
	2476	surf_lsm_v(2)%nrsws, surf_lsm_v(3)%nrsws, &
	2477	surf_usm_v(0)%nrsws, surf_usm_v(1)%nrsws, &
	2478	surf_usm_v(2)%nrsws, surf_usm_v(3)%nrsws )
[1875]	2479
	2480	!
	2481	!-- Prognostic equation for rain drop concentration
	2482	DO i = nxl, nxr
	2483	DO j = nys, nyn
[2232]	2484	DO k = nzb+1, nzt
	2485	nr_p(k,j,i) = nr(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2486	tsc(3) * tnr_m(k,j,i) ) &
	2487	- tsc(5) * rdf_sc(k) * &
	2488	nr(k,j,i) &
	2489	) &
	2490	* MERGE( 1.0_wp, 0.0_wp, &
	2491	BTEST( wall_flags_0(k,j,i), 0 ) &
	2492	)
[1875]	2493	IF ( nr_p(k,j,i) < 0.0_wp ) nr_p(k,j,i) = 0.0_wp
	2494	ENDDO
	2495	ENDDO
	2496	ENDDO
	2497
	2498	!
	2499	!-- Calculate tendencies for the next Runge-Kutta step
	2500	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2501	IF ( intermediate_timestep_count == 1 ) THEN
	2502	DO i = nxl, nxr
	2503	DO j = nys, nyn
[2232]	2504	DO k = nzb+1, nzt
[1875]	2505	tnr_m(k,j,i) = tend(k,j,i)
	2506	ENDDO
	2507	ENDDO
	2508	ENDDO
	2509	ELSEIF ( intermediate_timestep_count < &
	2510	intermediate_timestep_count_max ) THEN
	2511	DO i = nxl, nxr
	2512	DO j = nys, nyn
[2232]	2513	DO k = nzb+1, nzt
	2514	tnr_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2515	+ 5.3125_wp * tnr_m(k,j,i)
[1875]	2516	ENDDO
	2517	ENDDO
	2518	ENDDO
	2519	ENDIF
	2520	ENDIF
	2521
	2522	CALL cpu_log( log_point(53), 'nr-equation', 'stop' )
	2523
	2524	ENDIF
	2525
	2526	ENDIF
[1960]	2527	!
	2528	!-- If required, compute prognostic equation for scalar
	2529	IF ( passive_scalar ) THEN
[1875]	2530
[1960]	2531	CALL cpu_log( log_point(66), 's-equation', 'start' )
	2532
[1875]	2533	!
[1960]	2534	!-- Scalar/q-tendency terms with communication
	2535	sbt = tsc(2)
	2536	IF ( scalar_advec == 'bc-scheme' ) THEN
	2537
	2538	IF ( timestep_scheme(1:5) /= 'runge' ) THEN
	2539	!
	2540	!-- Bott-Chlond scheme always uses Euler time step. Thus:
	2541	sbt = 1.0_wp
	2542	ENDIF
	2543	tend = 0.0_wp
	2544	CALL advec_s_bc( s, 's' )
	2545
	2546	ENDIF
	2547
	2548	!
	2549	!-- Scalar/q-tendency terms with no communication
	2550	IF ( scalar_advec /= 'bc-scheme' ) THEN
	2551	tend = 0.0_wp
	2552	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2553	IF ( ws_scheme_sca ) THEN
	2554	CALL advec_s_ws( s, 's' )
	2555	ELSE
	2556	CALL advec_s_pw( s )
	2557	ENDIF
	2558	ELSE
	2559	CALL advec_s_up( s )
	2560	ENDIF
	2561	ENDIF
	2562
[2232]	2563	CALL diffusion_s( s, &
	2564	surf_def_h(0)%ssws, surf_def_h(1)%ssws, &
	2565	surf_def_h(2)%ssws, &
	2566	surf_lsm_h%ssws, surf_usm_h%ssws, &
	2567	surf_def_v(0)%ssws, surf_def_v(1)%ssws, &
	2568	surf_def_v(2)%ssws, surf_def_v(3)%ssws, &
	2569	surf_lsm_v(0)%ssws, surf_lsm_v(1)%ssws, &
	2570	surf_lsm_v(2)%ssws, surf_lsm_v(3)%ssws, &
	2571	surf_usm_v(0)%ssws, surf_usm_v(1)%ssws, &
	2572	surf_usm_v(2)%ssws, surf_usm_v(3)%ssws )
[2155]	2573
[1960]	2574	!
	2575	!-- Sink or source of humidity due to canopy elements
	2576	IF ( plant_canopy ) CALL pcm_tendency( 7 )
	2577
	2578	!
	2579	!-- Large scale advection. Not implemented for scalars so far.
	2580	! IF ( large_scale_forcing ) THEN
	2581	! CALL ls_advec( simulated_time, 'q' )
	2582	! ENDIF
	2583
	2584	!
	2585	!-- Nudging. Not implemented for scalars so far.
[2155]	2586	! IF ( nudging ) CALL nudge( simulated_time, 'q' )
[1960]	2587
	2588	!
	2589	!-- If required compute influence of large-scale subsidence/ascent.
	2590	!-- Not implemented for scalars so far.
	2591	IF ( large_scale_subsidence .AND. &
	2592	.NOT. use_subsidence_tendencies .AND. &
	2593	.NOT. large_scale_forcing ) THEN
	2594	CALL subsidence( tend, s, s_init, 3 )
	2595	ENDIF
	2596
[3684]	2597	CALL module_interface_actions( 's-tendency' )
[1960]	2598
	2599	!
	2600	!-- Prognostic equation for total water content
	2601	DO i = nxl, nxr
	2602	DO j = nys, nyn
[2232]	2603	DO k = nzb+1, nzt
	2604	s_p(k,j,i) = s(k,j,i) + ( dt_3d * ( sbt * tend(k,j,i) + &
	2605	tsc(3) * ts_m(k,j,i) ) &
	2606	- tsc(5) * rdf_sc(k) * &
	2607	( s(k,j,i) - s_init(k) ) &
	2608	) &
	2609	* MERGE( 1.0_wp, 0.0_wp, &
	2610	BTEST( wall_flags_0(k,j,i), 0 ) &
	2611	)
[1960]	2612	IF ( s_p(k,j,i) < 0.0_wp ) s_p(k,j,i) = 0.1_wp * s(k,j,i)
	2613	ENDDO
	2614	ENDDO
	2615	ENDDO
	2616
	2617	!
	2618	!-- Calculate tendencies for the next Runge-Kutta step
	2619	IF ( timestep_scheme(1:5) == 'runge' ) THEN
	2620	IF ( intermediate_timestep_count == 1 ) THEN
	2621	DO i = nxl, nxr
	2622	DO j = nys, nyn
[2232]	2623	DO k = nzb+1, nzt
[1960]	2624	ts_m(k,j,i) = tend(k,j,i)
	2625	ENDDO
	2626	ENDDO
	2627	ENDDO
	2628	ELSEIF ( intermediate_timestep_count < &
	2629	intermediate_timestep_count_max ) THEN
	2630	DO i = nxl, nxr
	2631	DO j = nys, nyn
[2232]	2632	DO k = nzb+1, nzt
	2633	ts_m(k,j,i) = -9.5625_wp * tend(k,j,i) &
	2634	+ 5.3125_wp * ts_m(k,j,i)
[1960]	2635	ENDDO
	2636	ENDDO
	2637	ENDDO
	2638	ENDIF
	2639	ENDIF
	2640
	2641	CALL cpu_log( log_point(66), 's-equation', 'stop' )
	2642
	2643	ENDIF
[1875]	2644
[3294]	2645	!
	2646	!-- Calculate prognostic equations for turbulence closure
[3386]	2647	CALL tcm_prognostic_equations()
[3837]	2648	!
	2649	!-- Calculate prognostic equations for all other modules
	2650	CALL module_interface_prognostic_equations()
[1875]	2651
[2815]	2652	!
[3294]	2653	!-- Calculate prognostic equation for chemical quantites
[2815]	2654	IF ( air_chemistry ) THEN
[3719]	2655	CALL cpu_log( log_point_s(25), 'chem.advec+diff+prog', 'start' )
[2815]	2656	!
	2657	!-- Loop over chemical species
	2658	DO lsp = 1, nvar
[3294]	2659	CALL chem_prognostic_equations( chem_species(lsp)%conc_p, &
	2660	chem_species(lsp)%conc, &
	2661	chem_species(lsp)%tconc_m, &
	2662	chem_species(lsp)%conc_pr_init, &
	2663	lsp )
[2815]	2664	ENDDO
[1875]	2665
[3719]	2666	CALL cpu_log( log_point_s(25), 'chem.advec+diff+prog', 'stop' )
[2815]	2667	ENDIF ! Chemicals equations
[3467]	2668
	2669	IF ( salsa ) THEN
	2670	CALL cpu_log( log_point_s(92), 'salsa advec+diff+prog ', 'start' )
	2671	!
	2672	!-- Loop over aerosol size bins: number and mass bins
	2673	IF ( time_since_reference_point >= skip_time_do_salsa ) THEN
	2674
	2675	DO b = 1, nbins
	2676	sums_salsa_ws_l = aerosol_number(b)%sums_ws_l
	2677	CALL salsa_tendency( 'aerosol_number', aerosol_number(b)%conc_p, &
	2678	aerosol_number(b)%conc, &
	2679	aerosol_number(b)%tconc_m, &
	2680	b, b, aerosol_number(b)%init )
	2681	aerosol_number(b)%sums_ws_l = sums_salsa_ws_l
	2682	DO c = 1, ncc_tot
	2683	sums_salsa_ws_l = aerosol_mass((c-1)*nbins+b)%sums_ws_l
	2684	CALL salsa_tendency( 'aerosol_mass', &
	2685	aerosol_mass((c-1)*nbins+b)%conc_p, &
	2686	aerosol_mass((c-1)*nbins+b)%conc, &
	2687	aerosol_mass((c-1)*nbins+b)%tconc_m, &
	2688	b, c, aerosol_mass((c-1)*nbins+b)%init )
	2689	aerosol_mass((c-1)*nbins+b)%sums_ws_l = sums_salsa_ws_l
	2690	ENDDO
	2691	ENDDO
	2692	IF ( .NOT. salsa_gases_from_chem ) THEN
	2693	DO g = 1, ngast
	2694	sums_salsa_ws_l = salsa_gas(g)%sums_ws_l
	2695	CALL salsa_tendency( 'salsa_gas', salsa_gas(g)%conc_p, &
	2696	salsa_gas(g)%conc, salsa_gas(g)%tconc_m, &
	2697	g, g, salsa_gas(g)%init )
	2698	salsa_gas(g)%sums_ws_l = sums_salsa_ws_l
	2699	ENDDO
	2700	ENDIF
	2701
	2702	ENDIF
	2703
	2704	CALL cpu_log( log_point_s(92), 'salsa advec+diff+prog ', 'stop' )
	2705	ENDIF
[2815]	2706
[3294]	2707	!
	2708	!-- Calculate prognostic equations for the ocean
	2709	IF ( ocean_mode ) CALL ocean_prognostic_equations()
[2815]	2710
[1875]	2711	END SUBROUTINE prognostic_equations_vector
	2712
	2713
	2714	END MODULE prognostic_equations_mod

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