source: palm/trunk/SOURCE/palm.f90 @ 3205

Last change on this file since 3205 was 3182, checked in by suehring, 6 years ago

New Inifor features: grid stretching, improved command-interface, support start dates in different formats in both YYYYMMDD and YYYYMMDDHH, Ability to manually control input file prefixes (--radiation-prefix, --soil-preifx, --flow-prefix, --soilmoisture-prefix) for compatiblity with DWD forcast naming scheme; GNU-style short and long option; Prepared output of large-scale forcing profiles (no computation yet); Added preprocessor flag netcdf4 to switch output format between netCDF 3 and 4; Updated netCDF variable names and attributes to comply with PIDS v1.9; Inifor bugfixes: Improved compatibility with older Intel Intel compilers by avoiding implicit array allocation; Added origin_lon/_lat values and correct reference time in dynamic driver global attributes; corresponding PALM changes: adjustments to revised Inifor; variables names in dynamic driver adjusted; enable geostrophic forcing also in offline nested mode; variable names in LES-LES and COSMO offline nesting changed; lateral boundary flags for nesting, in- and outflow conditions renamed

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1!> @file palm.f90
2!------------------------------------------------------------------------------!
3! This file is part of the PALM model system.
4!
5! PALM is free software: you can redistribute it and/or modify it under the
6! terms of the GNU General Public License as published by the Free Software
7! Foundation, either version 3 of the License, or (at your option) any later
8! version.
9!
10! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12! A PARTICULAR PURPOSE.  See the GNU General Public License for more details.
13!
14! You should have received a copy of the GNU General Public License along with
15! PALM. If not, see <http://www.gnu.org/licenses/>.
16!
17! Copyright 1997-2018 Leibniz Universitaet Hannover
18!------------------------------------------------------------------------------!
19!
20! Current revisions:
21! -----------------
22!
23!
24! Former revisions:
25! -----------------
26! $Id: palm.f90 3182 2018-07-27 13:36:03Z raasch $
27! Deduct spinup_time from RUN_CONTROL output of main 3d run
28! (use time_since_reference_point instead of simulated_time)
29!
30! 2951 2018-04-06 09:05:08Z kanani
31! Add log_point_s for pmci_init
32!
33! 2903 2018-03-16 08:17:06Z hellstea
34! Nesting-related calls to pmci_ensure_nest_mass_conservation and pres after
35! the nest initialization are removed as they may create unwanted initial
36! perturbation in some cases.
37!
38! 2894 2018-03-15 09:17:58Z Giersch
39! Modified todo list, _write_restart_data/_last_actions has been renamed to
40! _wrd_local, unit 14 will be opened now for each io_group
41! write_3d_binary is called wrd_local now, wrd_global moved from wrd_local to
42! palm.f90, unit 14 is closed directly after the wrd_local call, Module related
43! routines for writing restart data have been moved to wrd_local
44!
45! 2801 2018-02-14 16:01:55Z suehring
46! Changed lpm from subroutine to module.
47! Introduce particle transfer in nested models.
48!
49! 2766 2018-01-22 17:17:47Z kanani
50! Removed preprocessor directive __chem
51!
52! 2720 2018-01-02 16:27:15Z kanani
53! Version update to 5.0
54!
55! 2718 2018-01-02 08:49:38Z maronga
56! Corrected "Former revisions" section
57!
58! 2696 2017-12-14 17:12:51Z kanani
59! Change in file header (GPL part)
60! Implementation of chemistry module (FK)
61! Introduce input-data standard
62! Rename lsm_last_actions into lsm_write_restart_data
63! Move usm_write_restart_data into io_blocks loop (MS)
64!
65! 2512 2017-10-04 08:26:59Z raasch
66! user interface required revision updated
67!
68! 2320 2017-07-21 12:47:43Z suehring
69! Modularize large-scale forcing and nudging
70!
71! 2298 2017-06-29 09:28:18Z raasch
72! type of write_binary changed from CHARACTER to LOGICAL,
73! user interface required revision updated, MPI2 related part removed
74!
75! 2296 2017-06-28 07:53:56Z maronga
76! Added call to new spinup routine
77!
78! 2292 2017-06-20 09:51:42Z schwenkel
79! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
80! includes two more prognostic equations for cloud drop concentration (nc) 
81! and cloud water content (qc).
82!
83! 2261 2017-06-08 14:25:57Z raasch
84! output of run number for mrun to create unified cycle numbers
85!
86! 2233 2017-05-30 18:08:54Z suehring
87!
88! 2232 2017-05-30 17:47:52Z suehring
89! Renamed wall_flags_0 and wall_flags_00 into advc_flags_1 and advc_flags_2,
90! respectively, within copyin statement. Moreover, introduced further flag
91! array wall_flags_0.
92! Remove unused variables from ONLY list.
93!
94! 2178 2017-03-17 11:07:39Z hellstea
95! Calls for pmci_ensure_nest_mass_conservation and pres are added after
96! the nest initialization
97!
98! 2118 2017-01-17 16:38:49Z raasch
99! OpenACC directives and related code removed
100!
101! 2011 2016-09-19 17:29:57Z kanani
102! Flag urban_surface is now defined in module control_parameters.
103!
104! 2007 2016-08-24 15:47:17Z kanani
105! Temporarily added CALL for writing of restart data for urban surface model
106!
107! 2000 2016-08-20 18:09:15Z knoop
108! Forced header and separation lines into 80 columns
109!
110! 1976 2016-07-27 13:28:04Z maronga
111! Added call to radiation_last_actions for binary output of land surface model
112! data
113!
114! 1972 2016-07-26 07:52:02Z maronga
115! Added call to lsm_last_actions for binary output of land surface model data
116!
117! 1960 2016-07-12 16:34:24Z suehring
118! Separate humidity and passive scalar
119!
120! 1834 2016-04-07 14:34:20Z raasch
121! Initial version of purely vertical nesting introduced.
122!
123! 1833 2016-04-07 14:23:03Z raasch
124! required user interface version changed
125!
126! 1808 2016-04-05 19:44:00Z raasch
127! routine local_flush replaced by FORTRAN statement
128!
129! 1783 2016-03-06 18:36:17Z raasch
130! required user interface version changed
131!
132! 1781 2016-03-03 15:12:23Z raasch
133! pmc initialization moved from time_integration to here
134!
135! 1779 2016-03-03 08:01:28Z raasch
136! setting of nest_domain and coupling_char moved to the pmci
137!
138! 1764 2016-02-28 12:45:19Z raasch
139! cpp-statements for nesting removed, communicator settings cleaned up
140!
141! 1762 2016-02-25 12:31:13Z hellstea
142! Introduction of nested domain feature
143!
144! 1747 2016-02-08 12:25:53Z raasch
145! OpenACC-adjustment for new surface layer parameterization
146!
147! 1682 2015-10-07 23:56:08Z knoop
148! Code annotations made doxygen readable
149!
150! 1668 2015-09-23 13:45:36Z raasch
151! warning replaced by abort in case of failed user interface check
152!
153! 1666 2015-09-23 07:31:10Z raasch
154! check for user's interface version added
155!
156! 1482 2014-10-18 12:34:45Z raasch
157! adjustments for using CUDA-aware OpenMPI
158!
159! 1468 2014-09-24 14:06:57Z maronga
160! Adapted for use on up to 6-digit processor cores
161!
162! 1402 2014-05-09 14:25:13Z raasch
163! location messages added
164!
165! 1374 2014-04-25 12:55:07Z raasch
166! bugfix: various modules added
167!
168! 1320 2014-03-20 08:40:49Z raasch
169! ONLY-attribute added to USE-statements,
170! kind-parameters added to all INTEGER and REAL declaration statements,
171! kinds are defined in new module kinds,
172! old module precision_kind is removed,
173! revision history before 2012 removed,
174! comment fields (!:) to be used for variable explanations added to
175! all variable declaration statements
176!
177! 1318 2014-03-17 13:35:16Z raasch
178! module interfaces removed
179!
180! 1241 2013-10-30 11:36:58Z heinze
181! initialization of nuding and large scale forcing from external file
182!
183! 1221 2013-09-10 08:59:13Z raasch
184! +wall_flags_00, rflags_invers, rflags_s_inner in copyin statement
185!
186! 1212 2013-08-15 08:46:27Z raasch
187! +tri in copyin statement
188!
189! 1179 2013-06-14 05:57:58Z raasch
190! ref_state added to copyin-list
191!
192! 1113 2013-03-10 02:48:14Z raasch
193! openACC statements modified
194!
195! 1111 2013-03-08 23:54:10Z raasch
196! openACC statements updated
197!
198! 1092 2013-02-02 11:24:22Z raasch
199! unused variables removed
200!
201! 1036 2012-10-22 13:43:42Z raasch
202! code put under GPL (PALM 3.9)
203!
204! 1015 2012-09-27 09:23:24Z raasch
205! Version number changed from 3.8 to 3.8a.
206! OpenACC statements added + code changes required for GPU optimization
207!
208! 849 2012-03-15 10:35:09Z raasch
209! write_particles renamed lpm_write_restart_file
210!
211! Revision 1.1  1997/07/24 11:23:35  raasch
212! Initial revision
213!
214!
215! Description:
216! ------------
217!> Large-Eddy Simulation (LES) model for the convective boundary layer,
218!> optimized for use on parallel machines (implementation realized using the
219!> Message Passing Interface (MPI)). The model can also be run on vector machines
220!> (less well optimized) and workstations. Versions for the different types of
221!> machines are controlled via cpp-directives.
222!> Model runs are only feasible using the ksh-script mrun.
223!>
224!> @todo create routine last_actions instead of calling lsm_last_actions etc.
225!> @todo move chem_init call to init_3d_model or to check_parameters
226!------------------------------------------------------------------------------!
227 PROGRAM palm
228 
229
230    USE arrays_3d
231
232    USE chemistry_model_mod,                                                   &
233        ONLY:  chem_init
234
235    USE chem_photolysis_mod,                                                   &
236        ONLY:  photolysis_init
237
238    USE control_parameters,                                                    &
239        ONLY:  air_chemistry,                                                  &
240               cloud_physics, constant_diffusion, child_domain, coupling_char, &
241               coupling_mode,                                                  &
242               do2d_at_begin, do3d_at_begin, humidity, initializing_actions,   &
243               io_blocks, io_group, large_scale_forcing,                       &
244               message_string, microphysics_morrison, microphysics_seifert,    &
245               neutral, nudging, passive_scalar, runnr,                        &
246               simulated_time, simulated_time_chr, spinup,                     &
247               time_since_reference_point,                                     &
248               user_interface_current_revision,                                &
249               user_interface_required_revision, version, wall_heatflux,       &
250               write_binary
251
252    USE cpulog,                                                                &
253        ONLY:  cpu_log, log_point, log_point_s, cpu_statistics
254
255    USE indices,                                                               &
256        ONLY:  nbgp
257
258    USE netcdf_data_input_mod,                                                 &
259        ONLY:  netcdf_data_input_inquire_file, netcdf_data_input_init,         &
260               netcdf_data_input_surface_data, netcdf_data_input_topo
261
262    USE kinds
263
264    USE particle_attributes,                                                   &
265        ONLY:  particle_advection
266
267    USE pegrid
268
269    USE pmc_particle_interface,                                                &
270        ONLY: pmcp_g_alloc_win
271
272    USE pmc_interface,                                                         &
273        ONLY:  cpl_id, nested_run, pmci_child_initialize, pmci_init,           &
274               pmci_modelconfiguration, pmci_parent_initialize,                &
275               pmci_ensure_nest_mass_conservation
276
277    USE write_restart_data_mod,                                                &
278        ONLY:  wrd_global, wrd_local
279
280
281    IMPLICIT NONE
282
283!
284!-- Local variables
285    CHARACTER(LEN=9)  ::  time_to_string  !<
286    CHARACTER(LEN=10) ::  env_string      !< to store string of environment var
287    INTEGER(iwp)      ::  env_stat        !< to hold status of GET_ENV
288    INTEGER(iwp)      ::  i               !<
289    INTEGER(iwp)      ::  myid_openmpi    !< OpenMPI local rank for CUDA aware MPI
290
291    version = 'PALM 5.0'
292    user_interface_required_revision = 'r2512'
293
294#if defined( __parallel )
295!
296!-- MPI initialisation. comm2d is preliminary set, because
297!-- it will be defined in init_pegrid but is used before in cpu_log.
298    CALL MPI_INIT( ierr )
299
300!
301!-- Initialize the coupling for nested-domain runs
302!-- comm_palm is the communicator which includes all PEs (MPI processes)
303!-- available for this (nested) model. If it is not a nested run, comm_palm
304!-- is returned as MPI_COMM_WORLD
305    CALL cpu_log( log_point_s(70), 'pmci_init', 'start' )
306    CALL pmci_init( comm_palm )
307    CALL cpu_log( log_point_s(70), 'pmci_init', 'stop' )
308    comm2d = comm_palm
309!
310!-- Get the (preliminary) number of MPI processes and the local PE-id (in case
311!-- of a further communicator splitting in init_coupling, these numbers will
312!-- be changed in init_pegrid).
313    IF ( nested_run )  THEN
314
315       CALL MPI_COMM_SIZE( comm_palm, numprocs, ierr )
316       CALL MPI_COMM_RANK( comm_palm, myid, ierr )
317
318    ELSE
319
320       CALL MPI_COMM_SIZE( MPI_COMM_WORLD, numprocs, ierr )
321       CALL MPI_COMM_RANK( MPI_COMM_WORLD, myid, ierr )
322!
323!--    Initialize PE topology in case of coupled atmosphere-ocean runs (comm_palm
324!--    will be splitted in init_coupling)
325       CALL init_coupling
326    ENDIF
327#endif
328
329!
330!-- Initialize measuring of the CPU-time remaining to the run
331    CALL local_tremain_ini
332
333!
334!-- Start of total CPU time measuring.
335    CALL cpu_log( log_point(1), 'total', 'start' )
336    CALL cpu_log( log_point(2), 'initialisation', 'start' )
337
338!
339!-- Open a file for debug output
340    WRITE (myid_char,'(''_'',I6.6)')  myid
341    OPEN( 9, FILE='DEBUG'//TRIM( coupling_char )//myid_char, FORM='FORMATTED' )
342
343!
344!-- Initialize dvrp logging. Also, one PE maybe split from the global
345!-- communicator for doing the dvrp output. In that case, the number of
346!-- PEs available for PALM is reduced by one and communicator comm_palm
347!-- is changed respectively.
348#if defined( __parallel )
349    CALL MPI_COMM_RANK( comm_palm, myid, ierr )
350!
351!-- TEST OUTPUT (TO BE REMOVED)
352    WRITE(9,*) '*** coupling_mode = "', TRIM( coupling_mode ), '"'
353    FLUSH( 9 )
354    IF ( TRIM( coupling_mode ) /= 'uncoupled' )  THEN
355       PRINT*, '*** PE', myid, ' Global target PE:', target_id, &
356               TRIM( coupling_mode )
357    ENDIF
358#endif
359
360    CALL init_dvrp_logging
361
362!
363!-- Read control parameters from NAMELIST files and read environment-variables
364    CALL parin
365
366!
367!-- Check for the user's interface version
368    IF ( user_interface_current_revision /= user_interface_required_revision )  &
369    THEN
370       message_string = 'current user-interface revision "' //                  &
371                        TRIM( user_interface_current_revision ) // '" does ' // &
372                        'not match the required revision ' //                   &
373                        TRIM( user_interface_required_revision )
374        CALL message( 'palm', 'PA0169', 1, 2, 0, 6, 0 )
375    ENDIF
376
377!
378!-- Determine processor topology and local array indices
379    CALL init_pegrid
380!
381!-- Check if input file according to input-data standard exists
382    CALL netcdf_data_input_inquire_file
383!
384!-- Read topography input data if required. This is required before the
385!-- numerical grid is finally created in init_grid
386    CALL netcdf_data_input_topo 
387!
388!-- Generate grid parameters, initialize generic topography and further process
389!-- topography information if required
390    CALL init_grid
391!
392!-- Read global attributes if available. 
393    CALL netcdf_data_input_init 
394!
395!-- Read surface classification data, e.g. vegetation and soil types, water
396!-- surfaces, etc., if available. Some of these data is required before
397!-- check parameters is invoked.     
398    CALL netcdf_data_input_surface_data
399!
400!-- Initialize chemistry (called before check_parameters due to dependencies)
401!-- --> Needs to be moved!! What is the dependency about?
402! IF (  TRIM( initializing_actions ) /= 'read_restart_data' )  THEN
403    IF ( air_chemistry )  THEN
404       CALL chem_init
405       CALL photolysis_init   ! probably also required for restart
406    ENDIF
407! END IF
408!
409!-- Check control parameters and deduce further quantities
410    CALL check_parameters
411
412!
413!-- Initialize all necessary variables
414    CALL init_3d_model
415
416!
417!-- Coupling protocol setup for nested-domain runs
418    IF ( nested_run )  THEN
419       CALL pmci_modelconfiguration
420!
421!--    Receive and interpolate initial data on children.
422!--    Child initialization must be made first if the model is both child and
423!--    parent if necessary
424       IF ( TRIM( initializing_actions ) /= 'read_restart_data' )  THEN
425          CALL pmci_child_initialize
426!
427!--       Send initial condition data from parent to children
428          CALL pmci_parent_initialize
429!
430!--    Exchange_horiz is needed after the nest initialization
431          IF ( child_domain )  THEN
432             CALL exchange_horiz( u, nbgp )
433             CALL exchange_horiz( v, nbgp )
434             CALL exchange_horiz( w, nbgp )
435             IF ( .NOT. neutral )  THEN
436                CALL exchange_horiz( pt, nbgp )
437             ENDIF
438             IF ( .NOT. constant_diffusion )  CALL exchange_horiz( e, nbgp )
439             IF ( humidity )  THEN
440                CALL exchange_horiz( q, nbgp )
441                IF ( cloud_physics  .AND.  microphysics_morrison )  THEN
442                  CALL exchange_horiz( qc, nbgp )
443                  CALL exchange_horiz( nc, nbgp )
444                ENDIF
445                IF ( cloud_physics  .AND.  microphysics_seifert )  THEN
446                   CALL exchange_horiz( qr, nbgp ) 
447                   CALL exchange_horiz( nr, nbgp )
448                ENDIF
449             ENDIF
450             IF ( passive_scalar )  CALL exchange_horiz( s, nbgp )
451          ENDIF
452       ENDIF
453
454       CALL pmcp_g_alloc_win                    ! Must be called after pmci_child_initialize and pmci_parent_initialize
455    ENDIF
456
457!
458!-- Output of program header
459    IF ( myid == 0 )  CALL header
460
461    CALL cpu_log( log_point(2), 'initialisation', 'stop' )
462
463!
464!-- Integration of the non-atmospheric equations (land surface model, urban
465!-- surface model)
466    IF ( spinup )  THEN
467       CALL time_integration_spinup
468    ENDIF
469
470!
471!-- Set start time in format hh:mm:ss
472    simulated_time_chr = time_to_string( time_since_reference_point )
473
474!
475!-- If required, output of initial arrays
476    IF ( do2d_at_begin )  THEN
477       CALL data_output_2d( 'xy', 0 )
478       CALL data_output_2d( 'xz', 0 )
479       CALL data_output_2d( 'yz', 0 )
480    ENDIF
481
482    IF ( do3d_at_begin )  THEN
483       CALL data_output_3d( 0 )
484    ENDIF
485
486!
487!-- Integration of the model equations using timestep-scheme
488    CALL time_integration
489
490!
491!-- If required, write binary data for restart runs
492    IF ( write_binary )  THEN
493
494       CALL cpu_log( log_point(22), 'wrd_local', 'start' )
495
496       CALL location_message( 'writing restart data', .FALSE. )
497
498       DO  i = 0, io_blocks-1
499          IF ( i == io_group )  THEN
500
501!
502!--          Open binary file
503             CALL check_open( 14 )
504!
505!--          Write control parameters and other global variables for restart.
506             IF ( myid == 0 )  CALL wrd_global
507!
508!--          Write processor specific flow field data for restart runs
509             CALL wrd_local
510!
511!--          Close binary file
512             CALL close_file( 14 )
513
514          ENDIF
515#if defined( __parallel )
516          CALL MPI_BARRIER( comm2d, ierr )
517#endif
518       ENDDO
519
520       CALL location_message( 'finished', .TRUE. )
521
522       CALL cpu_log( log_point(22), 'wrd_local', 'stop' )
523
524!
525!--    If required, write particle data in own restart files
526       IF ( particle_advection )  CALL lpm_write_restart_file
527       
528    ENDIF
529
530!
531!-- If required, repeat output of header including the required CPU-time
532    IF ( myid == 0 )  CALL header
533!
534!-- If required, final  user-defined actions, and
535!-- last actions on the open files and close files. Unit 14 was opened
536!-- in wrd_local but it is closed here, to allow writing on this
537!-- unit in routine user_last_actions.
538    CALL cpu_log( log_point(4), 'last actions', 'start' )
539         
540    CALL user_last_actions
541    CALL close_file( 0 )
542    CALL close_dvrp
543
544    CALL cpu_log( log_point(4), 'last actions', 'stop' )
545
546!
547!-- Write run number to file (used by mrun to create unified cycle numbers for
548!-- output files
549    IF ( myid == 0  .AND.  runnr > 0 )  THEN
550       OPEN( 90, FILE='RUN_NUMBER', FORM='FORMATTED' )
551       WRITE( 90, '(I4)' )  runnr
552       CLOSE( 90 )
553    ENDIF
554
555!
556!-- Take final CPU-time for CPU-time analysis
557    CALL cpu_log( log_point(1), 'total', 'stop' )
558    CALL cpu_statistics
559
560#if defined( __parallel )
561    CALL MPI_FINALIZE( ierr )
562#endif
563
564 END PROGRAM palm
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