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netcdf_data_input_mod.f90 @ 3556

Last change on this file since 3556 was 3556, checked in by suehring, 6 years ago
restart mechanism for surface elements commented, some formatting
Property svn:keywords set to `Id`
File size: 269.4 KB

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1	!> @file netcdf_data_input_mod.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! -----------------
22	! Some formatting adjustment
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: netcdf_data_input_mod.f90 3556 2018-11-22 14:11:57Z suehring $
27	! variables documented and unused variables removed
28	!
29	! 3552 2018-11-22 10:28:35Z suehring
30	! Revise ghost point exchange and resizing of input variables
31	!
32	! 3542 2018-11-20 17:04:13Z suehring
33	! - read optional attributes from file
34	! - set default origin_time
35	!
36	! 3518 2018-11-12 18:10:23Z suehring
37	! Additional checks
38	!
39	! 3516 2018-11-12 15:49:39Z gronemeier
40	! bugfix: - difference in z coordinate between file and PALM must be <1e-6
41	! - output of error 553 for all PEs
42	!
43	! 3498 2018-11-07 10:53:03Z gronemeier
44	! Bugfix: print error message by processor which encounters the error
45	!
46	! 3485 2018-11-03 17:09:40Z gronemeier
47	! - get central meridian from origin_lon if crs does not exist
48	! - set default origin_lon to 0
49	!
50	! 3483 2018-11-02 14:19:26Z raasch
51	! bugfix: misplaced directives for netCDF fixed
52	!
53	! 3474 2018-10-30 21:07:39Z kanani
54	! Add UV exposure model input (Schrempf)
55	!
56	! 3472 2018-10-30 20:43:50Z suehring
57	! Salsa implemented
58	!
59	! 3464 2018-10-30 18:08:55Z kanani
60	! Define coordinate reference system (crs) and read from input dataset
61	! Revise default values for reference coordinates
62	!
63	! 3459 2018-10-30 15:04:11Z gronemeier
64	! from chemistry branch r3443, banzhafs, Russo:
65	! Uncommented lines on dimension of surface_fractions
66	! Removed par_emis_time_factor variable, moved to chem_emissions_mod
67	! Initialized nspec and other emission variables at time of declaration
68	! Modified EXPERT mode to PRE-PROCESSED mode
69	! Introduced Chemistry static netcdf file
70	! Added the routine for reading-in netcdf data for chemistry
71	! Added routines to get_variable interface specific for chemistry files
72	!
73	! 3429 2018-10-25 13:04:23Z knoop
74	! add default values of origin_x/y/z
75	!
76	! 3404 2018-10-23 13:29:11Z suehring
77	! Consider time-dependent geostrophic wind components in offline nesting
78	!
79	! 3376 2018-10-19 10:15:32Z suehring
80	! Additional check for consistent building initialization implemented
81	!
82	! 3347 2018-10-15 14:21:08Z suehring
83	! Subroutine renamed
84	!
85	! 3257 2018-09-17 17:11:46Z suehring
86	! (from branch resler)
87	! Formatting
88	!
89	! 3298 2018-10-02 12:21:11Z kanani
90	! Modified EXPERT mode to PRE-PROCESSED mode (Russo)
91	! Introduced Chemistry static netcdf file (Russo)
92	! Added the routine for reading-in netcdf data for chemistry (Russo)
93	! Added routines to get_variable interface specific for chemistry files (Russo)
94	!
95	! 3257 2018-09-17 17:11:46Z suehring
96	! Adjust checks for building_type and building_id, which is necessary after
97	! topography filtering (building_type and id can be modified by the filtering).
98	!
99	! 3254 2018-09-17 10:53:57Z suehring
100	! Additional check for surface_fractions and and checks for building_id and
101	! building_type extended.
102	!
103	! 3241 2018-09-12 15:02:00Z raasch
104	! unused variables removed
105	!
106	! 3215 2018-08-29 09:58:59Z suehring
107	! - Separate input of soil properties from input of atmospheric data. This
108	! enables input of soil properties also in child domains without any
109	! dependence on atmospheric input
110	! - Check for missing initial 1D/3D data in dynamic input file
111	! - Revise checks for matching grid spacing in model and input file
112	! - Bugfix, add netcdf4_parallel directive for collective read operation
113	! - Revise error message numbers
114	!
115	! 3209 2018-08-27 16:58:37Z suehring
116	! Read zsoil dimension length only if soil variables are provided
117	!
118	! 3183 2018-07-27 14:25:55Z suehring
119	! Adjust input of dynamic driver according to revised Inifor version.
120	! Replace simulated_time by time_since_reference_point.
121	! Rename variables in mesoscale-offline nesting mode.
122	!
123	! 3182 2018-07-27 13:36:03Z suehring
124	! Slightly revise check for surface_fraction in order to check only the relevant
125	! fractions
126	!
127	! 3103 2018-07-04 17:30:52Z suehring
128	! New check for negative terrain heights
129	!
130	! 3089 2018-06-27 13:20:38Z suehring
131	! Revise call for message routine in case of local data inconsistencies.
132	!
133	! 3054 2018-06-01 16:08:59Z gronemeier
134	! Bugfix: force an MPI abort if errors occur while reading building heights
135	! from ASCII file
136	!
137	! 3053 2018-06-01 12:59:07Z suehring
138	! Revise checks for variable surface_fraction
139	!
140	! 3051 2018-05-30 17:43:55Z suehring
141	! - Speed-up NetCDF input
142	! - Revise input routines and remove NetCDF input via IO-blocks since this is
143	! not working in parallel mode in case blocking collective read operations
144	! are done
145	! - Temporarily revoke renaming of input variables in dynamic driver (tend_ug,
146	! tend_vg, zsoil) in order to keep dynamic input file working with current
147	! model version
148	! - More detailed error messages created
149	!
150	! 3045 2018-05-28 07:55:41Z Giersch
151	! Error messages revised
152	!
153	! 3041 2018-05-25 10:39:54Z gronemeier
154	! Add data type for global file attributes
155	! Add read of global attributes of static driver
156	!
157	! 3037 2018-05-24 10:39:29Z gronemeier
158	! renamed 'depth' to 'zsoil'
159	!
160	! 3036 2018-05-24 10:18:26Z gronemeier
161	! Revision of input vars according to UC2 data standard
162	! - renamed 'orography_2D' to 'zt'
163	! - renamed 'buildings_2D' to 'buildings_2d'
164	! - renamed 'buildings_3D' to 'buildings_3d'
165	! - renamed 'leaf_are_density' to 'lad'
166	! - renamed 'basal_are_density' to 'bad'
167	! - renamed 'root_are_density_lad' to 'root_area_dens_r'
168	! - renamed 'root_are_density_lsm' to 'root_area_dens_s'
169	! - renamed 'ls_forcing_ug' to 'tend_ug'
170	! - renamed 'ls_forcing_vg' to 'tend_vg'
171	!
172	! 3019 2018-05-13 07:05:43Z maronga
173	! Improved reading speed of large NetCDF files
174	!
175	! 2963 2018-04-12 14:47:44Z suehring
176	! - Revise checks for static input variables.
177	! - Introduce index for vegetation/wall, pavement/green-wall and water/window
178	! surfaces, for clearer access of surface fraction, albedo, emissivity, etc. .
179	!
180	! 2958 2018-04-11 15:38:13Z suehring
181	! Synchronize longitude and latitude between nested model domains, values are
182	! taken from the root model.
183	!
184	! 2955 2018-04-09 15:14:01Z suehring
185	! Extend checks for consistent setting of buildings, its ID and type.
186	! Add log-points to measure CPU time of NetCDF data input.
187	!
188	! 2953 2018-04-09 11:26:02Z suehring
189	! Bugfix in checks for initialization data
190	!
191	! 2947 2018-04-04 18:01:41Z suehring
192	! Checks for dynamic input revised
193	!
194	! 2946 2018-04-04 17:01:23Z suehring
195	! Bugfix for revision 2945, perform checks only if dynamic input file is
196	! available.
197	!
198	! 2945 2018-04-04 16:27:14Z suehring
199	! - Mimic for topography input slightly revised, in order to enable consistency
200	! checks
201	! - Add checks for dimensions in dynamic input file and move already existing
202	! checks
203	!
204	! 2938 2018-03-27 15:52:42Z suehring
205	! Initial read of geostrophic wind components from dynamic driver.
206	!
207	! 2773 2018-01-30 14:12:54Z suehring
208	! Revise checks for surface_fraction.
209	!
210	! 2925 2018-03-23 14:54:11Z suehring
211	! Check for further inconsistent settings of surface_fractions.
212	! Some messages slightly rephrased and error numbers renamed.
213	!
214	! 2898 2018-03-15 13:03:01Z suehring
215	! Check if each building has a type. Further, check if dimensions in static
216	! input file match the model dimensions.
217	!
218	! 2897 2018-03-15 11:47:16Z suehring
219	! Relax restrictions for topography input, terrain and building heights can be
220	! input separately and are not mandatory any more.
221	!
222	! 2874 2018-03-13 10:55:42Z knoop
223	! Bugfix: wrong placement of netcdf cpp-macros fixed
224	!
225	! 2794 2018-02-07 14:09:43Z knoop
226	! Check if 3D building input is consistent to numeric grid.
227	!
228	! 2773 2018-01-30 14:12:54Z suehring
229	! - Enable initialization with 3D topography.
230	! - Move check for correct initialization in nesting mode to check_parameters.
231	!
232	! 2772 2018-01-29 13:10:35Z suehring
233	! Initialization of simulation independent on land-surface model.
234	!
235	! 2746 2018-01-15 12:06:04Z suehring
236	! Read plant-canopy variables independently on land-surface model usage
237	!
238	! 2718 2018-01-02 08:49:38Z maronga
239	! Corrected "Former revisions" section
240	!
241	! 2711 2017-12-20 17:04:49Z suehring
242	! Rename subroutine close_file to avoid double-naming.
243	!
244	! 2700 2017-12-15 14:12:35Z suehring
245	!
246	! 2696 2017-12-14 17:12:51Z kanani
247	! Initial revision (suehring)
248	!
249	!
250	!
251	!
252	! Authors:
253	! --------
254	! @author Matthias Suehring
255	!
256	! Description:
257	! ------------
258	!> Modulue contains routines to input data according to Palm input data
259	!> standart using dynamic and static input files.
260	!> @todo - Chemistry: revise reading of netcdf file and ajdust formatting according to standard!!!
261	!> @todo - Order input alphabetically
262	!> @todo - Revise error messages and error numbers
263	!> @todo - Input of missing quantities (chemical species, emission rates)
264	!> @todo - Defninition and input of still missing variable attributes
265	!> @todo - Input of initial geostrophic wind profiles with cyclic conditions.
266	!------------------------------------------------------------------------------!
267	MODULE netcdf_data_input_mod
268
269	USE control_parameters, &
270	ONLY: coupling_char, io_blocks, io_group
271
272	USE cpulog, &
273	ONLY: cpu_log, log_point_s
274
275	USE indices, &
276	ONLY: nbgp
277
278	USE kinds
279
280	#if defined ( __netcdf )
281	USE NETCDF
282	#endif
283
284	USE pegrid
285
286	USE surface_mod, &
287	ONLY: ind_pav_green, ind_veg_wall, ind_wat_win
288	!
289	!-- Define type for dimensions.
290	TYPE dims_xy
291	INTEGER(iwp) :: nx !< dimension length in x
292	INTEGER(iwp) :: ny !< dimension length in y
293	INTEGER(iwp) :: nz !< dimension length in z
294	REAL(wp), DIMENSION(:), ALLOCATABLE :: x !< dimension array in x
295	REAL(wp), DIMENSION(:), ALLOCATABLE :: y !< dimension array in y
296	REAL(wp), DIMENSION(:), ALLOCATABLE :: z !< dimension array in z
297	END TYPE dims_xy
298	!
299	!-- Define data type for nesting in larger-scale models like COSMO.
300	!-- Data type comprises u, v, w, pt, and q at lateral and top boundaries.
301	TYPE nest_offl_type
302
303	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names
304
305	INTEGER(iwp) :: nt !< number of time levels in dynamic input file
306	INTEGER(iwp) :: nzu !< number of vertical levels on scalar grid in dynamic input file
307	INTEGER(iwp) :: nzw !< number of vertical levels on w grid in dynamic input file
308	INTEGER(iwp) :: tind !< time index for reference time in mesoscale-offline nesting
309	INTEGER(iwp) :: tind_p !< time index for following time in mesoscale-offline nesting
310
311	LOGICAL :: init = .FALSE. !< flag indicating that offline nesting is already initialized
312
313	REAL(wp), DIMENSION(:), ALLOCATABLE :: surface_pressure !< time dependent surface pressure
314	REAL(wp), DIMENSION(:), ALLOCATABLE :: time !< time levels in dynamic input file
315	REAL(wp), DIMENSION(:), ALLOCATABLE :: zu_atmos !< vertical levels at scalar grid in dynamic input file
316	REAL(wp), DIMENSION(:), ALLOCATABLE :: zw_atmos !< vertical levels at w grid in dynamic input file
317
318	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: ug !< domain-averaged geostrophic component
319	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: vg !< domain-averaged geostrophic component
320
321	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_left !< u-component at left boundary
322	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_left !< v-component at left boundary
323	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_left !< w-component at left boundary
324	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_left !< mixing ratio at left boundary
325	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_left !< potentital temperautre at left boundary
326
327	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_north !< u-component at north boundary
328	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_north !< v-component at north boundary
329	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_north !< w-component at north boundary
330	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_north !< mixing ratio at north boundary
331	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_north !< potentital temperautre at north boundary
332
333	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_right !< u-component at right boundary
334	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_right !< v-component at right boundary
335	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_right !< w-component at right boundary
336	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_right !< mixing ratio at right boundary
337	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_right !< potentital temperautre at right boundary
338
339	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_south !< u-component at south boundary
340	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_south !< v-component at south boundary
341	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_south !< w-component at south boundary
342	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_south !< mixing ratio at south boundary
343	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_south !< potentital temperautre at south boundary
344
345	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_top !< u-component at top boundary
346	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_top !< v-component at top boundary
347	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_top !< w-component at top boundary
348	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_top !< mixing ratio at top boundary
349	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_top !< potentital temperautre at top boundary
350
351	END TYPE nest_offl_type
352
353	TYPE init_type
354
355	CHARACTER(LEN=23) :: origin_time = '2000-01-01 00:00:00 +00' !< reference time of input data
356
357	INTEGER(iwp) :: lod_msoil !< level of detail - soil moisture
358	INTEGER(iwp) :: lod_pt !< level of detail - pt
359	INTEGER(iwp) :: lod_q !< level of detail - q
360	INTEGER(iwp) :: lod_tsoil !< level of detail - soil temperature
361	INTEGER(iwp) :: lod_u !< level of detail - u-component
362	INTEGER(iwp) :: lod_v !< level of detail - v-component
363	INTEGER(iwp) :: lod_w !< level of detail - w-component
364	INTEGER(iwp) :: nx !< number of scalar grid points along x in dynamic input file
365	INTEGER(iwp) :: nxu !< number of u grid points along x in dynamic input file
366	INTEGER(iwp) :: ny !< number of scalar grid points along y in dynamic input file
367	INTEGER(iwp) :: nyv !< number of v grid points along y in dynamic input file
368	INTEGER(iwp) :: nzs !< number of vertical soil levels in dynamic input file
369	INTEGER(iwp) :: nzu !< number of vertical levels on scalar grid in dynamic input file
370	INTEGER(iwp) :: nzw !< number of vertical levels on w grid in dynamic input file
371
372	LOGICAL :: from_file_msoil = .FALSE. !< flag indicating whether soil moisture is already initialized from file
373	LOGICAL :: from_file_pt = .FALSE. !< flag indicating whether pt is already initialized from file
374	LOGICAL :: from_file_q = .FALSE. !< flag indicating whether q is already initialized from file
375	LOGICAL :: from_file_tsoil = .FALSE. !< flag indicating whether soil temperature is already initialized from file
376	LOGICAL :: from_file_u = .FALSE. !< flag indicating whether u is already initialized from file
377	LOGICAL :: from_file_ug = .FALSE. !< flag indicating whether ug is already initialized from file
378	LOGICAL :: from_file_v = .FALSE. !< flag indicating whether v is already initialized from file
379	LOGICAL :: from_file_vg = .FALSE. !< flag indicating whether ug is already initialized from file
380	LOGICAL :: from_file_w = .FALSE. !< flag indicating whether w is already initialized from file
381
382	REAL(wp) :: fill_msoil !< fill value for soil moisture
383	REAL(wp) :: fill_pt !< fill value for pt
384	REAL(wp) :: fill_q !< fill value for q
385	REAL(wp) :: fill_tsoil !< fill value for soil temperature
386	REAL(wp) :: fill_u !< fill value for u
387	REAL(wp) :: fill_v !< fill value for v
388	REAL(wp) :: fill_w !< fill value for w
389	REAL(wp) :: latitude = 0.0_wp !< latitude of the lower left corner
390	REAL(wp) :: longitude = 0.0_wp !< longitude of the lower left corner
391	REAL(wp) :: origin_x = 500000.0_wp !< UTM easting of the lower left corner
392	REAL(wp) :: origin_y = 0.0_wp !< UTM northing of the lower left corner
393	REAL(wp) :: origin_z = 0.0_wp !< reference height of input data
394	REAL(wp) :: rotation_angle = 0.0_wp !< rotation angle of input data
395
396	REAL(wp), DIMENSION(:), ALLOCATABLE :: msoil_1d !< initial vertical profile of soil moisture
397	REAL(wp), DIMENSION(:), ALLOCATABLE :: pt_init !< initial vertical profile of pt
398	REAL(wp), DIMENSION(:), ALLOCATABLE :: q_init !< initial vertical profile of q
399	REAL(wp), DIMENSION(:), ALLOCATABLE :: tsoil_1d !< initial vertical profile of soil temperature
400	REAL(wp), DIMENSION(:), ALLOCATABLE :: u_init !< initial vertical profile of u
401	REAL(wp), DIMENSION(:), ALLOCATABLE :: ug_init !< initial vertical profile of ug
402	REAL(wp), DIMENSION(:), ALLOCATABLE :: v_init !< initial vertical profile of v
403	REAL(wp), DIMENSION(:), ALLOCATABLE :: vg_init !< initial vertical profile of ug
404	REAL(wp), DIMENSION(:), ALLOCATABLE :: w_init !< initial vertical profile of w
405	REAL(wp), DIMENSION(:), ALLOCATABLE :: z_soil !< vertical levels in soil in dynamic input file, used for interpolation
406	REAL(wp), DIMENSION(:), ALLOCATABLE :: zu_atmos !< vertical levels at scalar grid in dynamic input file, used for interpolation
407	REAL(wp), DIMENSION(:), ALLOCATABLE :: zw_atmos !< vertical levels at w grid in dynamic input file, used for interpolation
408
409
410	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: msoil_3d !< initial 3d soil moisture provide by Inifor and interpolated onto soil grid
411	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: tsoil_3d !< initial 3d soil temperature provide by Inifor and interpolated onto soil grid
412
413	END TYPE init_type
414
415	!-- Data type for the general information of chemistry emissions, do not dependent on the particular chemical species
416	TYPE chem_emis_att_type
417
418	!-DIMENSIONS
419	INTEGER(iwp) :: nspec=0 !< number of chem species for which emission values are provided
420	INTEGER(iwp) :: ncat=0 !< number of emission categories
421	INTEGER(iwp) :: nvoc=0 !< number of VOCs components
422	INTEGER(iwp) :: npm=0 !< number of PMs components
423	INTEGER(iwp) :: nnox=2 !< number of NOx components: NO and NO2
424	INTEGER(iwp) :: nsox=2 !< number of SOx components: SO and SO4
425	INTEGER(iwp) :: nhoursyear !< number of hours of a specific year in the HOURLY mode
426	! of the default mode
427	INTEGER(iwp) :: nmonthdayhour !< number of month days and hours in the MDH mode
428	! of the default mode
429	INTEGER(iwp) :: dt_emission !< Number of emissions timesteps for one year
430	! in the pre-processed emissions case
431	!-- 1d emission input variables
432	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: pm_name !< Names of PMs components
433	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: cat_name !< Emission categories names
434	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: species_name !< Names of emission chemical species
435	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: voc_name !< Names of VOCs components
436	CHARACTER (LEN=25) :: units !< Units
437
438	INTEGER(iwp) :: i_hour !< indices for assigning the emission values at different timesteps
439	INTEGER(iwp),ALLOCATABLE, DIMENSION(:) :: cat_index !< Index of emission categories
440	INTEGER(iwp),ALLOCATABLE, DIMENSION(:) :: species_index !< Index of emission chem species
441
442	REAL(wp),ALLOCATABLE, DIMENSION(:) :: xm !< Molecular masses of emission chem species
443
444	!-- 2d emission input variables
445	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: hourly_emis_time_factor !< Time factors for HOURLY emissions (DEFAULT mode)
446	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: mdh_emis_time_factor !< Time factors for MDH emissions (DEFAULT mode)
447	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: nox_comp !< Composition of NO and NO2
448	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: sox_comp !< Composition of SO2 and SO4
449	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: voc_comp !< Composition of different VOC components (number not fixed)
450
451	!-- 3d emission input variables
452	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:) :: pm_comp !< Composition of different PMs components (number not fixed)
453
454	END TYPE chem_emis_att_type
455
456
457	!-- Data type for the values of chemistry emissions ERUSSO
458	TYPE chem_emis_val_type
459
460	!REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: stack_height !< stack height
461
462	!-- 3d emission input variables
463	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:) :: default_emission_data !< Input Values emissions DEFAULT mode
464
465	!-- 4d emission input variables
466	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:,:) :: preproc_emission_data !< Input Values emissions PRE-PROCESSED mode
467
468	END TYPE chem_emis_val_type
469
470	!
471	!-- Define data structures for different input data types.
472	!-- 8-bit Integer 2D
473	TYPE int_2d_8bit
474	INTEGER(KIND=1) :: fill = -127 !< fill value
475	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
476
477	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
478	END TYPE int_2d_8bit
479	!
480	!-- 8-bit Integer 3D
481	TYPE int_3d_8bit
482	INTEGER(KIND=1) :: fill = -127 !< fill value
483	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< respective variable
484
485	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
486	END TYPE int_3d_8bit
487	!
488	!-- 32-bit Integer 2D
489	TYPE int_2d_32bit
490	INTEGER(iwp) :: fill = -9999 !< fill value
491	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
492
493	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
494	END TYPE int_2d_32bit
495
496	!
497	!-- Define data type to read 2D real variables
498	TYPE real_2d
499	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
500
501	REAL(wp) :: fill = -9999.9_wp !< fill value
502	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
503	END TYPE real_2d
504
505	!
506	!-- Define data type to read 3D real variables
507	TYPE real_3d
508	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
509
510	INTEGER(iwp) :: nz !< number of grid points along vertical dimension
511
512	REAL(wp) :: fill = -9999.9_wp !< fill value
513	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: var !< respective variable
514	END TYPE real_3d
515	!
516	!-- Define data structure where the dimension and type of the input depends
517	!-- on the given level of detail.
518	!-- For buildings, the input is either 2D float, or 3d byte.
519	TYPE build_in
520	INTEGER(iwp) :: lod = 1 !< level of detail
521	INTEGER(KIND=1) :: fill2 = -127 !< fill value for lod = 2
522	INTEGER(iwp) :: nz !< number of vertical layers in file
523	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< 3d variable (lod = 2)
524
525	REAL(wp), DIMENSION(:), ALLOCATABLE :: z !< vertical coordinate for 3D building, used for consistency check
526
527	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
528
529	REAL(wp) :: fill1 = -9999.9_wp !< fill values for lod = 1
530	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: var_2d !< 2d variable (lod = 1)
531	END TYPE build_in
532
533	!
534	!-- For soil_type, the input is either 2D or 3D one-byte integer.
535	TYPE soil_in
536	INTEGER(iwp) :: lod = 1 !< level of detail
537	INTEGER(KIND=1) :: fill = -127 !< fill value for lod = 2
538	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var_2d !< 2d variable (lod = 1)
539	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< 3d variable (lod = 2)
540
541	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
542	END TYPE soil_in
543
544	!
545	!-- Define data type for fractions between surface types
546	TYPE fracs
547	INTEGER(iwp) :: nf !< total number of fractions
548	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: nfracs !< dimension array for fraction
549
550	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
551
552	REAL(wp) :: fill = -9999.9_wp !< fill value
553	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: frac !< respective fraction between different surface types
554	END TYPE fracs
555	!
556	!-- Data type for parameter lists, Depending on the given level of detail,
557	!-- the input is 3D or 4D
558	TYPE pars
559	INTEGER(iwp) :: lod = 1 !< level of detail
560	INTEGER(iwp) :: np !< total number of parameters
561	INTEGER(iwp) :: nz !< vertical dimension - number of soil layers
562	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: layers !< dimension array for soil layers
563	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: pars !< dimension array for parameters
564
565	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
566
567	REAL(wp) :: fill = -9999.9_wp !< fill value
568	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pars_xy !< respective parameters, level of detail = 1
569	REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: pars_xyz !< respective parameters, level of detail = 2
570	END TYPE pars
571	!
572	!-- Define type for global file attributes
573	!-- Please refer to the PALM data standard for a detailed description of each
574	!-- attribute.
575	TYPE global_atts_type
576	CHARACTER(LEN=12 ) :: acronym !< acronym of institution
577	CHARACTER(LEN=7) :: acronym_char = 'acronym' !< name of attribute
578	CHARACTER(LEN=200) :: author !< first name, last name, email adress
579	CHARACTER(LEN=6) :: author_char = 'author' !< name of attribute
580	CHARACTER(LEN=12 ) :: campaign = 'PALM-4U' !< name of campaign
581	CHARACTER(LEN=8) :: campaign_char = 'campaign' !< name of attribute
582	CHARACTER(LEN=200) :: comment !< comment to data
583	CHARACTER(LEN=7) :: comment_char = 'comment' !< name of attribute
584	CHARACTER(LEN=200) :: contact_person !< first name, last name, email adress
585	CHARACTER(LEN=14) :: contact_person_char = 'contact_person' !< name of attribute
586	CHARACTER(LEN=200) :: conventions = 'CF-1.7' !< netCDF convention
587	CHARACTER(LEN=11) :: conventions_char = 'Conventions' !< name of attribute
588	CHARACTER(LEN=23 ) :: creation_time !< creation time of data set
589	CHARACTER(LEN=13) :: creation_time_char = 'creation_time' !< name of attribute
590	CHARACTER(LEN=16 ) :: data_content !< content of data set
591	CHARACTER(LEN=12) :: data_content_char = 'data_content' !< name of attribute
592	CHARACTER(LEN=200) :: dependencies !< dependencies of data set
593	CHARACTER(LEN=12) :: dependencies_char = 'dependencies' !< name of attribute
594	CHARACTER(LEN=200) :: history !< information about data processing
595	CHARACTER(LEN=7) :: history_char = 'history' !< name of attribute
596	CHARACTER(LEN=200) :: institution !< name of responsible institution
597	CHARACTER(LEN=11) :: institution_char = 'institution' !< name of attribute
598	CHARACTER(LEN=200) :: keywords !< keywords of data set
599	CHARACTER(LEN=8) :: keywords_char = 'keywords' !< name of attribute
600	CHARACTER(LEN=200) :: licence !< licence of data set
601	CHARACTER(LEN=7) :: licence_char = 'licence' !< name of attribute
602	CHARACTER(LEN=200) :: location !< place which refers to data set
603	CHARACTER(LEN=8) :: location_char = 'location' !< name of attribute
604	CHARACTER(LEN=10) :: origin_lat_char = 'origin_lat' !< name of attribute
605	CHARACTER(LEN=10) :: origin_lon_char = 'origin_lon' !< name of attribute
606	CHARACTER(LEN=23 ) :: origin_time = '2000-01-01 00:00:00 +00' !< reference time
607	CHARACTER(LEN=11) :: origin_time_char = 'origin_time' !< name of attribute
608	CHARACTER(LEN=8) :: origin_x_char = 'origin_x' !< name of attribute
609	CHARACTER(LEN=8) :: origin_y_char = 'origin_y' !< name of attribute
610	CHARACTER(LEN=8) :: origin_z_char = 'origin_z' !< name of attribute
611	CHARACTER(LEN=12) :: palm_version_char = 'palm_version' !< name of attribute
612	CHARACTER(LEN=200) :: references !< literature referring to data set
613	CHARACTER(LEN=10) :: references_char = 'references' !< name of attribute
614	CHARACTER(LEN=14) :: rotation_angle_char = 'rotation_angle' !< name of attribute
615	CHARACTER(LEN=12 ) :: site !< name of model domain
616	CHARACTER(LEN=4) :: site_char = 'site' !< name of attribute
617	CHARACTER(LEN=200) :: source !< source of data set
618	CHARACTER(LEN=6) :: source_char = 'source' !< name of attribute
619	CHARACTER(LEN=200) :: title !< title of data set
620	CHARACTER(LEN=5) :: title_char = 'title' !< name of attribute
621	CHARACTER(LEN=7) :: version_char = 'version' !< name of attribute
622
623	INTEGER(iwp) :: version !< version of data set
624
625	REAL(wp) :: origin_lat !< latitude of lower left corner
626	REAL(wp) :: origin_lon !< longitude of lower left corner
627	REAL(wp) :: origin_x !< easting (UTM coordinate) of lower left corner
628	REAL(wp) :: origin_y !< northing (UTM coordinate) of lower left corner
629	REAL(wp) :: origin_z !< reference height
630	REAL(wp) :: palm_version !< PALM version of data set
631	REAL(wp) :: rotation_angle !< rotation angle of coordinate system of data set
632	END TYPE global_atts_type
633	!
634	!-- Define type for coordinate reference system (crs)
635	TYPE crs_type
636	CHARACTER(LEN=200) :: epsg_code = 'EPSG:25831' !< EPSG code
637	CHARACTER(LEN=200) :: grid_mapping_name = 'transverse_mercator' !< name of grid mapping
638	CHARACTER(LEN=200) :: long_name = 'coordinate reference system' !< name of variable crs
639	CHARACTER(LEN=200) :: units = 'm' !< unit of crs
640
641	REAL(wp) :: false_easting = 500000.0_wp !< false easting
642	REAL(wp) :: false_northing = 0.0_wp !< false northing
643	REAL(wp) :: inverse_flattening = 298.257223563_wp !< 1/f (default for WGS84)
644	REAL(wp) :: latitude_of_projection_origin = 0.0_wp !< latitude of projection origin
645	REAL(wp) :: longitude_of_central_meridian = 3.0_wp !< longitude of central meridian of UTM zone (default: zone 31)
646	REAL(wp) :: longitude_of_prime_meridian = 0.0_wp !< longitude of prime meridian
647	REAL(wp) :: scale_factor_at_central_meridian = 0.9996_wp !< scale factor of UTM coordinates
648	REAL(wp) :: semi_major_axis = 6378137.0_wp !< length of semi major axis (default for WGS84)
649	END TYPE crs_type
650
651	!
652	!-- Define variables
653	TYPE(crs_type) :: coord_ref_sys !< coordinate reference system
654
655	TYPE(dims_xy) :: dim_static !< data structure for x, y-dimension in static input file
656
657	TYPE(nest_offl_type) :: nest_offl !< data structure for data input at lateral and top boundaries (provided by Inifor)
658
659	TYPE(init_type) :: init_3d !< data structure for the initialization of the 3D flow and soil fields
660	TYPE(init_type) :: init_model !< data structure for the initialization of the model
661
662	!
663	!-- Define 2D variables of type NC_BYTE
664	TYPE(int_2d_8bit) :: albedo_type_f !< input variable for albedo type
665	TYPE(int_2d_8bit) :: building_type_f !< input variable for building type
666	TYPE(int_2d_8bit) :: pavement_type_f !< input variable for pavenment type
667	TYPE(int_2d_8bit) :: street_crossing_f !< input variable for water type
668	TYPE(int_2d_8bit) :: street_type_f !< input variable for water type
669	TYPE(int_2d_8bit) :: vegetation_type_f !< input variable for vegetation type
670	TYPE(int_2d_8bit) :: water_type_f !< input variable for water type
671	!
672	!-- Define 3D variables of type NC_BYTE
673	TYPE(int_3d_8bit) :: building_obstruction_f !< input variable for building obstruction
674	TYPE(int_3d_8bit) :: building_obstruction_full !< input variable for building obstruction
675	!
676	!-- Define 2D variables of type NC_INT
677	TYPE(int_2d_32bit) :: building_id_f !< input variable for building ID
678	!
679	!-- Define 2D variables of type NC_FLOAT
680	TYPE(real_2d) :: terrain_height_f !< input variable for terrain height
681	TYPE(real_2d) :: uvem_irradiance_f !< input variable for uvem irradiance lookup table
682	TYPE(real_2d) :: uvem_integration_f !< input variable for uvem integration
683	!
684	!-- Define 3D variables of type NC_FLOAT
685	TYPE(real_3d) :: basal_area_density_f !< input variable for basal area density - resolved vegetation
686	TYPE(real_3d) :: leaf_area_density_f !< input variable for leaf area density - resolved vegetation
687	TYPE(real_3d) :: root_area_density_lad_f !< input variable for root area density - resolved vegetation
688	TYPE(real_3d) :: root_area_density_lsm_f !< input variable for root area density - parametrized vegetation
689	TYPE(real_3d) :: uvem_radiance_f !< input variable for uvem radiance lookup table
690	TYPE(real_3d) :: uvem_projarea_f !< input variable for uvem projection area lookup table
691	!
692	!-- Define input variable for buildings
693	TYPE(build_in) :: buildings_f !< input variable for buildings
694	!
695	!-- Define input variables for soil_type
696	TYPE(soil_in) :: soil_type_f !< input variable for soil type
697
698	TYPE(fracs) :: surface_fraction_f !< input variable for surface fraction
699
700	TYPE(pars) :: albedo_pars_f !< input variable for albedo parameters
701	TYPE(pars) :: building_pars_f !< input variable for building parameters
702	TYPE(pars) :: pavement_pars_f !< input variable for pavement parameters
703	TYPE(pars) :: pavement_subsurface_pars_f !< input variable for pavement parameters
704	TYPE(pars) :: soil_pars_f !< input variable for soil parameters
705	TYPE(pars) :: vegetation_pars_f !< input variable for vegetation parameters
706	TYPE(pars) :: water_pars_f !< input variable for water parameters
707
708	TYPE(chem_emis_att_type) :: chem_emis_att !< Input Information of Chemistry Emission Data from netcdf
709	TYPE(chem_emis_val_type), ALLOCATABLE, DIMENSION(:) :: chem_emis !< Input Chemistry Emission Data from netcdf
710
711	CHARACTER(LEN=3) :: char_lod = 'lod' !< name of level-of-detail attribute in NetCDF file
712
713	CHARACTER(LEN=10) :: char_fill = '_FillValue' !< name of fill value attribute in NetCDF file
714
715	CHARACTER(LEN=100) :: input_file_static = 'PIDS_STATIC' !< Name of file which comprises static input data
716	CHARACTER(LEN=100) :: input_file_dynamic = 'PIDS_DYNAMIC' !< Name of file which comprises dynamic input data
717	CHARACTER(LEN=100) :: input_file_chem = 'PIDS_CHEM' !< Name of file which comprises chemistry input data
718	CHARACTER(LEN=100) :: input_file_uvem = 'PIDS_UVEM' !< Name of file which comprises static uv_exposure model input data
719	CHARACTER(LEN=100) :: input_file_vm = 'PIDS_VM' !< Name of file which comprises virtual measurement data
720
721	CHARACTER (LEN=25), ALLOCATABLE, DIMENSION(:) :: string_values !< output of string variables read from netcdf input files
722
723	INTEGER(iwp) :: id_emis !< NetCDF id of input file for chemistry emissions: TBD: It has to be removed
724
725	INTEGER(iwp) :: nc_stat !< return value of nf90 function call
726
727	LOGICAL :: input_pids_static = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing static information exists
728	LOGICAL :: input_pids_dynamic = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing dynamic information exists
729	LOGICAL :: input_pids_chem = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing chemistry information exists
730	LOGICAL :: input_pids_uvem = .FALSE. !< Flag indicating whether uv-expoure-model input file containing static information exists
731	LOGICAL :: input_pids_vm = .FALSE. !< Flag indicating whether input file for virtual measurements exist
732
733	LOGICAL :: collective_read = .FALSE. !< Enable NetCDF collective read
734
735	TYPE(global_atts_type) :: input_file_atts !< global attributes of input file
736
737	SAVE
738
739	PRIVATE
740
741	INTERFACE netcdf_data_input_interpolate
742	MODULE PROCEDURE netcdf_data_input_interpolate_1d
743	MODULE PROCEDURE netcdf_data_input_interpolate_1d_soil
744	MODULE PROCEDURE netcdf_data_input_interpolate_2d
745	MODULE PROCEDURE netcdf_data_input_interpolate_3d
746	END INTERFACE netcdf_data_input_interpolate
747
748	INTERFACE netcdf_data_input_check_dynamic
749	MODULE PROCEDURE netcdf_data_input_check_dynamic
750	END INTERFACE netcdf_data_input_check_dynamic
751
752	INTERFACE netcdf_data_input_check_static
753	MODULE PROCEDURE netcdf_data_input_check_static
754	END INTERFACE netcdf_data_input_check_static
755
756	INTERFACE netcdf_data_input_chemistry_data
757	MODULE PROCEDURE netcdf_data_input_chemistry_data
758	END INTERFACE netcdf_data_input_chemistry_data
759
760	INTERFACE netcdf_data_input_get_dimension_length
761	MODULE PROCEDURE netcdf_data_input_get_dimension_length
762	END INTERFACE netcdf_data_input_get_dimension_length
763
764	INTERFACE netcdf_data_input_inquire_file
765	MODULE PROCEDURE netcdf_data_input_inquire_file
766	END INTERFACE netcdf_data_input_inquire_file
767
768	INTERFACE netcdf_data_input_init
769	MODULE PROCEDURE netcdf_data_input_init
770	END INTERFACE netcdf_data_input_init
771
772	INTERFACE netcdf_data_input_att
773	MODULE PROCEDURE netcdf_data_input_att_int
774	MODULE PROCEDURE netcdf_data_input_att_real
775	MODULE PROCEDURE netcdf_data_input_att_string
776	END INTERFACE netcdf_data_input_att
777
778	INTERFACE netcdf_data_input_init_3d
779	MODULE PROCEDURE netcdf_data_input_init_3d
780	END INTERFACE netcdf_data_input_init_3d
781
782	INTERFACE netcdf_data_input_init_lsm
783	MODULE PROCEDURE netcdf_data_input_init_lsm
784	END INTERFACE netcdf_data_input_init_lsm
785
786	INTERFACE netcdf_data_input_offline_nesting
787	MODULE PROCEDURE netcdf_data_input_offline_nesting
788	END INTERFACE netcdf_data_input_offline_nesting
789
790	INTERFACE netcdf_data_input_surface_data
791	MODULE PROCEDURE netcdf_data_input_surface_data
792	END INTERFACE netcdf_data_input_surface_data
793
794	INTERFACE netcdf_data_input_var
795	MODULE PROCEDURE netcdf_data_input_var_char
796	MODULE PROCEDURE netcdf_data_input_var_real_1d
797	MODULE PROCEDURE netcdf_data_input_var_real_2d
798	END INTERFACE netcdf_data_input_var
799
800	INTERFACE netcdf_data_input_uvem
801	MODULE PROCEDURE netcdf_data_input_uvem
802	END INTERFACE netcdf_data_input_uvem
803
804	INTERFACE get_variable
805	MODULE PROCEDURE get_variable_1d_char
806	MODULE PROCEDURE get_variable_1d_int
807	MODULE PROCEDURE get_variable_1d_real
808	MODULE PROCEDURE get_variable_2d_int8
809	MODULE PROCEDURE get_variable_2d_int32
810	MODULE PROCEDURE get_variable_2d_real
811	MODULE PROCEDURE get_variable_3d_int8
812	MODULE PROCEDURE get_variable_3d_real
813	MODULE PROCEDURE get_variable_3d_real_dynamic
814	MODULE PROCEDURE get_variable_4d_to_3d_real
815	MODULE PROCEDURE get_variable_4d_real
816	MODULE PROCEDURE get_variable_5d_to_4d_real
817	MODULE PROCEDURE get_variable_string
818	END INTERFACE get_variable
819
820	INTERFACE get_variable_pr
821	MODULE PROCEDURE get_variable_pr
822	END INTERFACE get_variable_pr
823
824	INTERFACE get_attribute
825	MODULE PROCEDURE get_attribute_real
826	MODULE PROCEDURE get_attribute_int8
827	MODULE PROCEDURE get_attribute_int32
828	MODULE PROCEDURE get_attribute_string
829	END INTERFACE get_attribute
830
831	!
832	!-- Public variables
833	PUBLIC albedo_pars_f, albedo_type_f, basal_area_density_f, buildings_f, &
834	building_id_f, building_pars_f, building_type_f, &
835	chem_emis, chem_emis_att, chem_emis_att_type, chem_emis_val_type, &
836	coord_ref_sys, &
837	init_3d, init_model, input_file_atts, input_file_static, &
838	input_pids_static, &
839	input_pids_dynamic, input_pids_vm, input_file_vm, &
840	leaf_area_density_f, nest_offl, &
841	pavement_pars_f, pavement_subsurface_pars_f, pavement_type_f, &
842	root_area_density_lad_f, root_area_density_lsm_f, soil_pars_f, &
843	soil_type_f, street_crossing_f, street_type_f, surface_fraction_f, &
844	terrain_height_f, vegetation_pars_f, vegetation_type_f, &
845	water_pars_f, water_type_f
846	!
847	!-- Public uv exposure variables
848	PUBLIC building_obstruction_f, input_file_uvem, input_pids_uvem, &
849	netcdf_data_input_uvem, &
850	uvem_integration_f, uvem_irradiance_f, &
851	uvem_projarea_f, uvem_radiance_f
852
853	!
854	!-- Public subroutines
855	PUBLIC netcdf_data_input_check_dynamic, netcdf_data_input_check_static, &
856	netcdf_data_input_chemistry_data, &
857	netcdf_data_input_get_dimension_length, &
858	netcdf_data_input_inquire_file, &
859	netcdf_data_input_init, netcdf_data_input_init_lsm, &
860	netcdf_data_input_init_3d, netcdf_data_input_att, &
861	netcdf_data_input_interpolate, netcdf_data_input_offline_nesting, &
862	netcdf_data_input_surface_data, netcdf_data_input_topo, &
863	netcdf_data_input_var, get_attribute, get_variable, open_read_file
864
865
866	CONTAINS
867
868	!------------------------------------------------------------------------------!
869	! Description:
870	! ------------
871	!> Inquires whether NetCDF input files according to Palm-input-data standard
872	!> exist. Moreover, basic checks are performed.
873	!------------------------------------------------------------------------------!
874	SUBROUTINE netcdf_data_input_inquire_file
875
876	USE control_parameters, &
877	ONLY: topo_no_distinct
878
879	IMPLICIT NONE
880
881	#if defined ( __netcdf )
882	INQUIRE( FILE = TRIM( input_file_static ) // TRIM( coupling_char ), &
883	EXIST = input_pids_static )
884	INQUIRE( FILE = TRIM( input_file_dynamic ) // TRIM( coupling_char ), &
885	EXIST = input_pids_dynamic )
886	INQUIRE( FILE = TRIM( input_file_chem ) // TRIM( coupling_char ), &
887	EXIST = input_pids_chem )
888	INQUIRE( FILE = TRIM( input_file_uvem ) // TRIM( coupling_char ), &
889	EXIST = input_pids_uvem )
890	INQUIRE( FILE = TRIM( input_file_vm ) // TRIM( coupling_char ), &
891	EXIST = input_pids_vm )
892	#endif
893
894	!
895	!-- As long as topography can be input via ASCII format, no distinction
896	!-- between building and terrain can be made. This case, classify all
897	!-- surfaces as default type. Same in case land-surface and urban-surface
898	!-- model are not applied.
899	IF ( .NOT. input_pids_static ) THEN
900	topo_no_distinct = .TRUE.
901	ENDIF
902
903	END SUBROUTINE netcdf_data_input_inquire_file
904
905	!------------------------------------------------------------------------------!
906	! Description:
907	! ------------
908	!> Reads global attributes and coordinate reference system required for
909	!> initialization of the model.
910	!------------------------------------------------------------------------------!
911	SUBROUTINE netcdf_data_input_init
912
913	IMPLICIT NONE
914
915	INTEGER(iwp) :: id_mod !< NetCDF id of input file
916	INTEGER(iwp) :: var_id_crs !< NetCDF id of variable crs
917
918	IF ( .NOT. input_pids_static ) RETURN
919
920	#if defined ( __netcdf )
921	!
922	!-- Open file in read-only mode
923	CALL open_read_file( TRIM( input_file_static ) // &
924	TRIM( coupling_char ), id_mod )
925	!
926	!-- Read global attributes
927	CALL get_attribute( id_mod, input_file_atts%origin_lat_char, &
928	input_file_atts%origin_lat, .TRUE. )
929
930	CALL get_attribute( id_mod, input_file_atts%origin_lon_char, &
931	input_file_atts%origin_lon, .TRUE. )
932
933	CALL get_attribute( id_mod, input_file_atts%origin_time_char, &
934	input_file_atts%origin_time, .TRUE. )
935
936	CALL get_attribute( id_mod, input_file_atts%origin_x_char, &
937	input_file_atts%origin_x, .TRUE. )
938
939	CALL get_attribute( id_mod, input_file_atts%origin_y_char, &
940	input_file_atts%origin_y, .TRUE. )
941
942	CALL get_attribute( id_mod, input_file_atts%origin_z_char, &
943	input_file_atts%origin_z, .TRUE. )
944
945	CALL get_attribute( id_mod, input_file_atts%rotation_angle_char, &
946	input_file_atts%rotation_angle, .TRUE. )
947
948	CALL get_attribute( id_mod, input_file_atts%author_char, &
949	input_file_atts%author, .TRUE., no_abort=.FALSE. )
950	CALL get_attribute( id_mod, input_file_atts%contact_person_char, &
951	input_file_atts%contact_person, .TRUE., no_abort=.FALSE. )
952	CALL get_attribute( id_mod, input_file_atts%institution_char, &
953	input_file_atts%institution, .TRUE., no_abort=.FALSE. )
954	CALL get_attribute( id_mod, input_file_atts%acronym_char, &
955	input_file_atts%acronym, .TRUE., no_abort=.FALSE. )
956
957	CALL get_attribute( id_mod, input_file_atts%campaign_char, &
958	input_file_atts%campaign, .TRUE., no_abort=.FALSE. )
959	CALL get_attribute( id_mod, input_file_atts%location_char, &
960	input_file_atts%location, .TRUE., no_abort=.FALSE. )
961	CALL get_attribute( id_mod, input_file_atts%site_char, &
962	input_file_atts%site, .TRUE., no_abort=.FALSE. )
963
964	CALL get_attribute( id_mod, input_file_atts%source_char, &
965	input_file_atts%source, .TRUE., no_abort=.FALSE. )
966	CALL get_attribute( id_mod, input_file_atts%references_char, &
967	input_file_atts%references, .TRUE., no_abort=.FALSE. )
968	CALL get_attribute( id_mod, input_file_atts%keywords_char, &
969	input_file_atts%keywords, .TRUE., no_abort=.FALSE. )
970	CALL get_attribute( id_mod, input_file_atts%licence_char, &
971	input_file_atts%licence, .TRUE., no_abort=.FALSE. )
972	CALL get_attribute( id_mod, input_file_atts%comment_char, &
973	input_file_atts%comment, .TRUE., no_abort=.FALSE. )
974	!
975	!-- Read coordinate reference system if available
976	nc_stat = NF90_INQ_VARID( id_mod, 'crs', var_id_crs )
977	IF ( nc_stat == NF90_NOERR ) THEN
978	CALL get_attribute( id_mod, 'epsg_code', &
979	coord_ref_sys%epsg_code, &
980	.FALSE., 'crs' )
981	CALL get_attribute( id_mod, 'false_easting', &
982	coord_ref_sys%false_easting, &
983	.FALSE., 'crs' )
984	CALL get_attribute( id_mod, 'false_northing', &
985	coord_ref_sys%false_northing, &
986	.FALSE., 'crs' )
987	CALL get_attribute( id_mod, 'grid_mapping_name', &
988	coord_ref_sys%grid_mapping_name, &
989	.FALSE., 'crs' )
990	CALL get_attribute( id_mod, 'inverse_flattening', &
991	coord_ref_sys%inverse_flattening, &
992	.FALSE., 'crs' )
993	CALL get_attribute( id_mod, 'latitude_of_projection_origin', &
994	coord_ref_sys%latitude_of_projection_origin, &
995	.FALSE., 'crs' )
996	CALL get_attribute( id_mod, 'long_name', &
997	coord_ref_sys%long_name, &
998	.FALSE., 'crs' )
999	CALL get_attribute( id_mod, 'longitude_of_central_meridian', &
1000	coord_ref_sys%longitude_of_central_meridian, &
1001	.FALSE., 'crs' )
1002	CALL get_attribute( id_mod, 'longitude_of_prime_meridian', &
1003	coord_ref_sys%longitude_of_prime_meridian, &
1004	.FALSE., 'crs' )
1005	CALL get_attribute( id_mod, 'scale_factor_at_central_meridian', &
1006	coord_ref_sys%scale_factor_at_central_meridian, &
1007	.FALSE., 'crs' )
1008	CALL get_attribute( id_mod, 'semi_major_axis', &
1009	coord_ref_sys%semi_major_axis, &
1010	.FALSE., 'crs' )
1011	CALL get_attribute( id_mod, 'units', &
1012	coord_ref_sys%units, &
1013	.FALSE., 'crs' )
1014	ELSE
1015	!
1016	!-- Calculate central meridian from origin_lon
1017	coord_ref_sys%longitude_of_central_meridian = &
1018	CEILING( input_file_atts%origin_lon / 6.0_wp ) * 6.0_wp - 3.0_wp
1019	ENDIF
1020	!
1021	!-- Finally, close input file
1022	CALL close_input_file( id_mod )
1023	#endif
1024	!
1025	!-- Copy latitude, longitude, origin_z, rotation angle on init type
1026	init_model%latitude = input_file_atts%origin_lat
1027	init_model%longitude = input_file_atts%origin_lon
1028	init_model%origin_time = input_file_atts%origin_time
1029	init_model%origin_x = input_file_atts%origin_x
1030	init_model%origin_y = input_file_atts%origin_y
1031	init_model%origin_z = input_file_atts%origin_z
1032	init_model%rotation_angle = input_file_atts%rotation_angle
1033
1034	!
1035	!-- In case of nested runs, each model domain might have different longitude
1036	!-- and latitude, which would result in different Coriolis parameters and
1037	!-- sun-zenith angles. To avoid this, longitude and latitude in each model
1038	!-- domain will be set to the values of the root model. Please note, this
1039	!-- synchronization is required already here.
1040	#if defined( __parallel )
1041	CALL MPI_BCAST( init_model%latitude, 1, MPI_REAL, 0, &
1042	MPI_COMM_WORLD, ierr )
1043	CALL MPI_BCAST( init_model%longitude, 1, MPI_REAL, 0, &
1044	MPI_COMM_WORLD, ierr )
1045	#endif
1046
1047	END SUBROUTINE netcdf_data_input_init
1048
1049	!------------------------------------------------------------------------------!
1050	! Description:
1051	! ------------
1052	!> Read an array of characters.
1053	!------------------------------------------------------------------------------!
1054	SUBROUTINE netcdf_data_input_var_char( val, search_string, id_mod )
1055
1056	IMPLICIT NONE
1057
1058	CHARACTER(LEN=*) :: search_string !< name of the variable
1059	CHARACTER(LEN=*), DIMENSION(:) :: val !< variable which should be read
1060
1061	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1062
1063	#if defined ( __netcdf )
1064	!
1065	!-- Read variable
1066	CALL get_variable( id_mod, search_string, val )
1067	#endif
1068
1069	END SUBROUTINE netcdf_data_input_var_char
1070
1071	!------------------------------------------------------------------------------!
1072	! Description:
1073	! ------------
1074	!> Read an 1D array of REAL values.
1075	!------------------------------------------------------------------------------!
1076	SUBROUTINE netcdf_data_input_var_real_1d( val, search_string, id_mod )
1077
1078	IMPLICIT NONE
1079
1080	CHARACTER(LEN=*) :: search_string !< name of the variable
1081
1082	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1083
1084	REAL(wp), DIMENSION(:) :: val !< variable which should be read
1085
1086	#if defined ( __netcdf )
1087	!
1088	!-- Read variable
1089	CALL get_variable( id_mod, search_string, val )
1090	#endif
1091
1092	END SUBROUTINE netcdf_data_input_var_real_1d
1093
1094	!------------------------------------------------------------------------------!
1095	! Description:
1096	! ------------
1097	!> Read an 1D array of REAL values.
1098	!------------------------------------------------------------------------------!
1099	SUBROUTINE netcdf_data_input_var_real_2d( val, search_string, &
1100	id_mod, d1s, d1e, d2s, d2e )
1101
1102	IMPLICIT NONE
1103
1104	CHARACTER(LEN=*) :: search_string !< name of the variable
1105
1106	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1107	INTEGER(iwp) :: d1e !< end index of first dimension to be read
1108	INTEGER(iwp) :: d2e !< end index of second dimension to be read
1109	INTEGER(iwp) :: d1s !< start index of first dimension to be read
1110	INTEGER(iwp) :: d2s !< start index of second dimension to be read
1111
1112	REAL(wp), DIMENSION(:,:) :: val !< variable which should be read
1113
1114	#if defined ( __netcdf )
1115	!
1116	!-- Read character variable
1117	CALL get_variable( id_mod, search_string, val, d1s, d1e, d2s, d2e )
1118	#endif
1119
1120	END SUBROUTINE netcdf_data_input_var_real_2d
1121
1122	!------------------------------------------------------------------------------!
1123	! Description:
1124	! ------------
1125	!> Read a global string attribute
1126	!------------------------------------------------------------------------------!
1127	SUBROUTINE netcdf_data_input_att_string( val, search_string, id_mod, &
1128	input_file, global, openclose, &
1129	variable_name )
1130
1131	IMPLICIT NONE
1132
1133	CHARACTER(LEN=*) :: search_string !< name of the attribue
1134	CHARACTER(LEN=*) :: val !< attribute
1135
1136	CHARACTER(LEN=*) :: input_file !< name of input file
1137	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1138	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1139
1140	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1141
1142	LOGICAL :: global !< flag indicating a global or a variable's attribute
1143
1144	#if defined ( __netcdf )
1145	!
1146	!-- Open file in read-only mode if necessary
1147	IF ( openclose == 'open' ) THEN
1148	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1149	id_mod )
1150	ENDIF
1151	!
1152	!-- Read global attribute
1153	IF ( global ) THEN
1154	CALL get_attribute( id_mod, search_string, val, global )
1155	!
1156	!-- Read variable attribute
1157	ELSE
1158	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1159	ENDIF
1160	!
1161	!-- Close input file
1162	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1163	#endif
1164
1165	END SUBROUTINE netcdf_data_input_att_string
1166
1167	!------------------------------------------------------------------------------!
1168	! Description:
1169	! ------------
1170	!> Read a global integer attribute
1171	!------------------------------------------------------------------------------!
1172	SUBROUTINE netcdf_data_input_att_int( val, search_string, id_mod, &
1173	input_file, global, openclose, &
1174	variable_name )
1175
1176	IMPLICIT NONE
1177
1178	CHARACTER(LEN=*) :: search_string !< name of the attribue
1179
1180	CHARACTER(LEN=*) :: input_file !< name of input file
1181	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1182	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1183
1184	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1185	INTEGER(iwp) :: val !< value of the attribute
1186
1187	LOGICAL :: global !< flag indicating a global or a variable's attribute
1188
1189	#if defined ( __netcdf )
1190	!
1191	!-- Open file in read-only mode
1192	IF ( openclose == 'open' ) THEN
1193	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1194	id_mod )
1195	ENDIF
1196	!
1197	!-- Read global attribute
1198	IF ( global ) THEN
1199	CALL get_attribute( id_mod, search_string, val, global )
1200	!
1201	!-- Read variable attribute
1202	ELSE
1203	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1204	ENDIF
1205	!
1206	!-- Finally, close input file
1207	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1208	#endif
1209
1210	END SUBROUTINE netcdf_data_input_att_int
1211
1212	!------------------------------------------------------------------------------!
1213	! Description:
1214	! ------------
1215	!> Read a global real attribute
1216	!------------------------------------------------------------------------------!
1217	SUBROUTINE netcdf_data_input_att_real( val, search_string, id_mod, &
1218	input_file, global, openclose, &
1219	variable_name )
1220
1221	IMPLICIT NONE
1222
1223	CHARACTER(LEN=*) :: search_string !< name of the attribue
1224
1225	CHARACTER(LEN=*) :: input_file !< name of input file
1226	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1227	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1228
1229	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1230
1231	LOGICAL :: global !< flag indicating a global or a variable's attribute
1232
1233	REAL(wp) :: val !< value of the attribute
1234
1235	#if defined ( __netcdf )
1236	!
1237	!-- Open file in read-only mode
1238	IF ( openclose == 'open' ) THEN
1239	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1240	id_mod )
1241	ENDIF
1242	!
1243	!-- Read global attribute
1244	IF ( global ) THEN
1245	CALL get_attribute( id_mod, search_string, val, global )
1246	!
1247	!-- Read variable attribute
1248	ELSE
1249	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1250	ENDIF
1251	!
1252	!-- Finally, close input file
1253	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1254	#endif
1255
1256	END SUBROUTINE netcdf_data_input_att_real
1257
1258	!------------------------------------------------------------------------------!
1259	! Description:
1260	! ------------
1261	!> Reads Chemistry NETCDF Input data, such as emission values, emission species, etc. .
1262	!------------------------------------------------------------------------------!
1263	SUBROUTINE netcdf_data_input_chemistry_data(emt_att,emt)
1264
1265	USE chem_modules, &
1266	ONLY: do_emis, mode_emis, time_fac_type, &
1267	surface_csflux_name
1268
1269	USE control_parameters, &
1270	ONLY: message_string
1271
1272	USE indices, &
1273	ONLY: nz, nx, ny, nxl, nxr, nys, nyn, nzb, nzt
1274
1275	IMPLICIT NONE
1276
1277	TYPE(chem_emis_att_type), INTENT(INOUT) :: emt_att
1278	TYPE(chem_emis_val_type), ALLOCATABLE, DIMENSION(:), INTENT(INOUT) :: emt
1279
1280	CHARACTER (LEN=80) :: units='' !< units of chemistry inputs
1281
1282	INTEGER(iwp) :: ispec !< index for number of emission species in input
1283
1284	INTEGER(iwp), ALLOCATABLE, DIMENSION(:) :: dum_var !< value of variable read from netcdf input
1285	INTEGER(iwp) :: errno !< error number NF90_???? function
1286	INTEGER(iwp) :: id_var !< variable id
1287	! INTEGER(iwp) :: id_emis !< NetCDF id of input file
1288	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
1289	INTEGER(iwp) :: len_dims,len_dims_2 !< Length of dimensions
1290
1291	INTEGER(iwp) :: max_string_length=25 !< Variable for the maximum length of a string
1292
1293	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< Name of Variables
1294
1295	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:) :: dum_var_3d !< variable for storing temporary data of 3-dimensional
1296	! variables read from netcdf for chemistry emissions
1297
1298	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: dum_var_4d !< variable for storing temporary data of 5-dimensional
1299	!< variables read from netcdf for chemistry emissions
1300	!--
1301	!> Start the processing of the data
1302	CALL location_message( 'starting allocation of chemistry emissions arrays', .FALSE. )
1303
1304	!> Parameterized mode of the emissions
1305	IF (TRIM(mode_emis)=="PARAMETERIZED" .OR. TRIM(mode_emis)=="parameterized") THEN
1306
1307	ispec=1
1308	emt_att%nspec=0
1309
1310	!number of species
1311	DO WHILE (TRIM( surface_csflux_name( ispec ) ) /= 'novalue' )
1312
1313	emt_att%nspec=emt_att%nspec+1
1314	ispec=ispec+1
1315
1316	ENDDO
1317
1318	!-- allocate emission values data type arrays
1319	ALLOCATE(emt(emt_att%nspec))
1320
1321	!-- Read EMISSION SPECIES NAMES
1322
1323	!Assign values
1324	ALLOCATE(emt_att%species_name(emt_att%nspec))
1325
1326	DO ispec=1,emt_att%nspec
1327	emt_att%species_name(ispec) = TRIM(surface_csflux_name(ispec))
1328	ENDDO
1329
1330
1331	!> DEFAULT AND PRE-PROCESSED MODE
1332	ELSE
1333
1334	#if defined ( __netcdf )
1335	IF ( .NOT. input_pids_chem ) RETURN
1336
1337	!-- Open file in read-only mode
1338	CALL open_read_file( TRIM( input_file_chem ) // &
1339	TRIM( coupling_char ), id_emis )
1340	!-- inquire number of variables
1341	CALL inquire_num_variables( id_emis, num_vars )
1342
1343	!-- Get General Dimension Lengths: only number of species and number of categories.
1344	! the other dimensions depend on the mode of the emissions or on the presence of specific components
1345	!nspecies
1346	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nspec, 'nspecies' )
1347
1348
1349	!-- Allocate emission values data type arrays
1350	ALLOCATE(emt(1:emt_att%nspec))
1351
1352
1353	!-- Read EMISSION SPECIES NAMES
1354	!Allocate Arrays
1355	ALLOCATE(emt_att%species_name(emt_att%nspec))
1356
1357	!Call get Variable
1358	CALL get_variable( id_emis, 'emission_name', string_values, emt_att%nspec )
1359	emt_att%species_name=string_values
1360	! If allocated, Deallocate var_string, an array only used for reading-in strings
1361	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1362
1363	!-- Read EMISSION SPECIES INDEX
1364	!Allocate Arrays
1365	ALLOCATE(emt_att%species_index(emt_att%nspec))
1366	!Call get Variable
1367	CALL get_variable( id_emis, 'emission_index', emt_att%species_index )
1368
1369
1370	!-- Now the routine has to distinguish between DEFAULT and PRE-PROCESSED chemistry emission modes
1371
1372	IF (TRIM(mode_emis)=="DEFAULT" .OR. TRIM(mode_emis)=="default") THEN
1373
1374	!number of categories
1375	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%ncat, 'ncat' )
1376
1377	!-- Read EMISSION CATEGORIES INDEX
1378	!Allocate Arrays
1379	ALLOCATE(emt_att%cat_index(emt_att%ncat))
1380	!Call get Variable
1381	CALL get_variable( id_emis, 'emission_cat_index', emt_att%cat_index )
1382
1383
1384	DO ispec=1,emt_att%nspec
1385	!-- EMISSION_VOC_NAME (1-DIMENSIONAL)
1386	IF (TRIM(emt_att%species_name(ispec))=="VOC" .OR. TRIM(emt_att%species_name(ispec))=="voc") THEN
1387	!Allocate Array
1388	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nvoc, 'nvoc' )
1389	ALLOCATE(emt_att%voc_name(1:emt_att%nvoc))
1390	!Read-in Variable
1391	CALL get_variable( id_emis,"emission_voc_name",string_values, emt_att%nvoc)
1392	emt_att%voc_name=string_values
1393	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1394
1395	!-- COMPOSITION VOC (2-DIMENSIONAL)
1396	!Allocate Array
1397	ALLOCATE(emt_att%voc_comp(1:emt_att%ncat,1:emt_att%nvoc))
1398	!Read-in Variable
1399	! CALL get_variable(id_emis,"composition_voc",emt%voc_comp,1,1,emt%ncat,emt%nvoc)
1400	CALL get_variable(id_emis,"composition_voc",emt_att%voc_comp,1,emt_att%ncat,1,emt_att%nvoc)
1401	ENDIF
1402
1403	!-- EMISSION_PM_NAME (1-DIMENSIONAL)
1404	IF (TRIM(emt_att%species_name(ispec))=="PM" .OR. TRIM(emt_att%species_name(ispec))=="pm") THEN
1405	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%npm, 'npm' )
1406	ALLOCATE(emt_att%pm_name(1:emt_att%npm))
1407	!Read-in Variable
1408	CALL get_variable( id_emis,"pm_name",string_values, emt_att%npm)
1409	emt_att%pm_name=string_values
1410	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1411
1412	!-- COMPOSITION PM (3-DIMENSIONAL)
1413	!Allocate
1414	len_dims=3 !> number of PMs: PM1, PM2.5 and PM10
1415	ALLOCATE(emt_att%pm_comp(1:emt_att%ncat,1:emt_att%npm,1:len_dims))
1416	!Read-in Variable
1417	CALL get_variable(id_emis,"composition_pm",emt_att%pm_comp,1,emt_att%ncat,1,emt_att%npm,1,len_dims)
1418	ENDIF
1419
1420	!-- COMPOSITION_NOX (2-DIMENSIONAL)
1421	IF (TRIM(emt_att%species_name(ispec))=="NOx" .OR. TRIM(emt_att%species_name(ispec))=="nox") THEN
1422	!Allocate array
1423	ALLOCATE(emt_att%nox_comp(1:emt_att%ncat,1:emt_att%nnox))
1424	!Read-in Variable
1425	CALL get_variable(id_emis,"composition_nox",emt_att%nox_comp,1,emt_att%ncat,1,emt_att%nnox)
1426	ENDIF
1427
1428	!-- COMPOSITION-SOX (2-DIMENSIONAL)
1429	IF (TRIM(emt_att%species_name(ispec))=="SOx" .OR. TRIM(emt_att%species_name(ispec))=="sox") THEN
1430	ALLOCATE(emt_att%sox_comp(1:emt_att%ncat,1:emt_att%nsox))
1431	!Read-in Variable
1432	CALL get_variable(id_emis,"composition_sox",emt_att%sox_comp,1,emt_att%ncat,1,emt_att%nsox)
1433	ENDIF
1434	ENDDO !>ispec
1435
1436	!-- For reading the emission time factors, the distinction between HOUR and MDH data is necessary
1437
1438	!-- EMISSION_TIME_SCALING_FACTORS
1439	!-- HOUR
1440	IF (TRIM(time_fac_type)=="HOUR" .OR. TRIM(time_fac_type)=="hour") THEN
1441	!-- Allocate Array
1442	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nhoursyear, 'nhoursyear' )
1443	ALLOCATE(emt_att%hourly_emis_time_factor(1:emt_att%ncat,1:emt_att%nhoursyear))
1444	!Read-in Variable
1445	CALL get_variable(id_emis,"emission_time_factors",emt_att%hourly_emis_time_factor,1, &
1446	emt_att%ncat,1,emt_att%nhoursyear)
1447
1448	!-- MDH
1449	ELSE IF (TRIM(time_fac_type) == "MDH" .OR. TRIM(time_fac_type) == "mdh") THEN
1450	!-- Allocate Array
1451	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nmonthdayhour, 'nmonthdayhour' )
1452	ALLOCATE(emt_att%mdh_emis_time_factor(1:emt_att%ncat,1:emt_att%nmonthdayhour))
1453	!-- Read-in Variable
1454	CALL get_variable(id_emis,"emission_time_factors",emt_att%mdh_emis_time_factor,1, &
1455	emt_att%ncat,1,emt_att%nmonthdayhour)
1456
1457	ELSE
1458
1459	message_string = 'We are in the DEFAULT chemistry emissions mode: ' // &
1460	' !no time-factor type specified!' // &
1461	'Please, specify the value of time_fac_type:' // &
1462	' either "MDH" or "HOUR"'
1463	CALL message( 'netcdf_data_input_chemistry_data', 'CM0200', 2, 2, 0, 6, 0 )
1464
1465
1466	ENDIF
1467
1468	!-- Finally read-in the emission values and their units (DEFAULT mode)
1469
1470	DO ispec=1,emt_att%nspec
1471
1472	IF ( .NOT. ALLOCATED( emt(ispec)%default_emission_data ) ) &
1473	ALLOCATE(emt(ispec)%default_emission_data(1:emt_att%ncat,1:ny+1,1:nx+1))
1474
1475	ALLOCATE(dum_var_3d(1:emt_att%ncat,nys+1:nyn+1,nxl+1:nxr+1))
1476
1477	CALL get_variable(id_emis,"emission_values",dum_var_3d,ispec,1,emt_att%ncat,nys,nyn,nxl,nxr)
1478
1479	emt(ispec)%default_emission_data(:,nys+1:nyn+1,nxl+1:nxr+1) = &
1480	dum_var_3d(1:emt_att%ncat,nys+1:nyn+1,nxl+1:nxr+1)
1481
1482	DEALLOCATE (dum_var_3d)
1483
1484	ENDDO
1485
1486	!-- UNITS
1487	CALL get_attribute(id_emis,"units",emt_att%units,.FALSE.,"emission_values")
1488
1489
1490	!-- PRE-PROCESSED MODE --
1491
1492	ELSE IF (TRIM(mode_emis)=="PRE-PROCESSED" .OR. TRIM(mode_emis)=="pre-processed") THEN
1493	!-- In the PRE-PROCESSED mode, only the VOC names, the VOC_composition, the emission values and their units remain to be read at this point
1494
1495	DO ispec=1,emt_att%nspec
1496
1497	!-- EMISSION_VOC_NAME (1-DIMENSIONAL)
1498	IF (TRIM(emt_att%species_name(ispec))=="VOC" .OR. TRIM(emt_att%species_name(ispec))=="voc") THEN
1499	!Allocate Array
1500	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nvoc, 'nvoc' )
1501	ALLOCATE(emt_att%voc_name(1:emt_att%nvoc))
1502	!Read-in Variable
1503	CALL get_variable( id_emis,"emission_voc_name",string_values, emt_att%nvoc)
1504	emt_att%voc_name=string_values
1505	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1506
1507	!-- COMPOSITION VOC (2-DIMENSIONAL)
1508	!Allocate Array
1509	ALLOCATE(emt_att%voc_comp(1:emt_att%ncat,1:emt_att%nvoc))
1510	!Read-in Variable
1511	CALL get_variable(id_emis,"composition_voc",emt_att%voc_comp,1,emt_att%ncat,1,emt_att%nvoc)
1512	ENDIF
1513
1514	ENDDO !> ispec
1515
1516	!-- EMISSION_VALUES (4-DIMENSIONAL)
1517	!Calculate temporal dimension length
1518	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%dt_emission, 'time' )
1519
1520
1521	DO ispec=1,emt_att%nspec
1522
1523	!Allocation for the entire domain has to be done only for the first processor between all the subdomains
1524	IF ( .NOT. ALLOCATED( emt(ispec)%preproc_emission_data ) ) &
1525	ALLOCATE(emt(ispec)%preproc_emission_data(emt_att%dt_emission,1,1:ny+1,1:nx+1))
1526
1527	!> allocate variable where to pass emission values read from netcdf
1528	ALLOCATE(dum_var_4d(1:emt_att%dt_emission,1,nys+1:nyn+1,nxl+1:nxr+1))
1529
1530	!Read-in Variable
1531	CALL get_variable(id_emis,"emission_values",dum_var_4d,ispec,1,emt_att%dt_emission,1,1,nys,nyn,nxl,nxr)
1532
1533
1534	emt(ispec)%preproc_emission_data(:,1,nys+1:nyn+1,nxl+1:nxr+1) = &
1535	dum_var_4d(1:emt_att%dt_emission,1,nys+1:nyn+1,nxl+1:nxr+1)
1536
1537	DEALLOCATE ( dum_var_4d )
1538
1539	ENDDO
1540
1541	!-- UNITS
1542	CALL get_attribute(id_emis,"units",emt_att%units,.FALSE.,"emission_values")
1543
1544	ENDIF
1545
1546	CALL close_input_file( id_emis )
1547
1548	#endif
1549	ENDIF
1550
1551	END SUBROUTINE netcdf_data_input_chemistry_data
1552
1553	!------------------------------------------------------------------------------!
1554	! Description:
1555	! ------------
1556	!> Reads surface classification data, such as vegetation and soil type, etc. .
1557	!------------------------------------------------------------------------------!
1558	SUBROUTINE netcdf_data_input_surface_data
1559
1560	USE control_parameters, &
1561	ONLY: bc_lr_cyc, bc_ns_cyc, land_surface, plant_canopy, &
1562	urban_surface
1563
1564	USE indices, &
1565	ONLY: nbgp, nx, nxl, nxr,ny, nyn, nys
1566
1567
1568	IMPLICIT NONE
1569
1570	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
1571
1572	INTEGER(iwp) :: id_surf !< NetCDF id of input file
1573	INTEGER(iwp) :: k !< running index along z-direction
1574	INTEGER(iwp) :: k2 !< running index
1575	INTEGER(iwp) :: num_vars !< number of variables in input file
1576	INTEGER(iwp) :: nz_soil !< number of soil layers in file
1577
1578	!
1579	!-- If not static input file is available, skip this routine
1580	IF ( .NOT. input_pids_static ) RETURN
1581	!
1582	!-- Measure CPU time
1583	CALL cpu_log( log_point_s(82), 'NetCDF input', 'start' )
1584	!
1585	!-- Read plant canopy variables.
1586	IF ( plant_canopy ) THEN
1587	#if defined ( __netcdf )
1588	!
1589	!-- Open file in read-only mode
1590	CALL open_read_file( TRIM( input_file_static ) // &
1591	TRIM( coupling_char ) , id_surf )
1592	!
1593	!-- At first, inquire all variable names.
1594	!-- This will be used to check whether an optional input variable
1595	!-- exist or not.
1596	CALL inquire_num_variables( id_surf, num_vars )
1597
1598	ALLOCATE( var_names(1:num_vars) )
1599	CALL inquire_variable_names( id_surf, var_names )
1600
1601	!
1602	!-- Read leaf area density - resolved vegetation
1603	IF ( check_existence( var_names, 'lad' ) ) THEN
1604	leaf_area_density_f%from_file = .TRUE.
1605	CALL get_attribute( id_surf, char_fill, &
1606	leaf_area_density_f%fill, &
1607	.FALSE., 'lad' )
1608	!
1609	!-- Inquire number of vertical vegetation layer
1610	CALL netcdf_data_input_get_dimension_length( id_surf, &
1611	leaf_area_density_f%nz, &
1612	'zlad' )
1613	!
1614	!-- Allocate variable for leaf-area density
1615	ALLOCATE( leaf_area_density_f%var( 0:leaf_area_density_f%nz-1, &
1616	nys:nyn,nxl:nxr) )
1617
1618	CALL get_variable( id_surf, 'lad', leaf_area_density_f%var, &
1619	nxl, nxr, nys, nyn, &
1620	0, leaf_area_density_f%nz-1 )
1621
1622	ELSE
1623	leaf_area_density_f%from_file = .FALSE.
1624	ENDIF
1625
1626	!
1627	!-- Read basal area density - resolved vegetation
1628	IF ( check_existence( var_names, 'bad' ) ) THEN
1629	basal_area_density_f%from_file = .TRUE.
1630	CALL get_attribute( id_surf, char_fill, &
1631	basal_area_density_f%fill, &
1632	.FALSE., 'bad' )
1633	!
1634	!-- Inquire number of vertical vegetation layer
1635	CALL netcdf_data_input_get_dimension_length( id_surf, &
1636	basal_area_density_f%nz, &
1637	'zlad' )
1638	!
1639	!-- Allocate variable
1640	ALLOCATE( basal_area_density_f%var(0:basal_area_density_f%nz-1, &
1641	nys:nyn,nxl:nxr) )
1642
1643	CALL get_variable( id_surf, 'bad', basal_area_density_f%var, &
1644	nxl, nxr, nys, nyn, &
1645	0, basal_area_density_f%nz-1 )
1646	ELSE
1647	basal_area_density_f%from_file = .FALSE.
1648	ENDIF
1649
1650	!
1651	!-- Read root area density - resolved vegetation
1652	IF ( check_existence( var_names, 'root_area_dens_r' ) ) THEN
1653	root_area_density_lad_f%from_file = .TRUE.
1654	CALL get_attribute( id_surf, char_fill, &
1655	root_area_density_lad_f%fill, &
1656	.FALSE., 'root_area_dens_r' )
1657	!
1658	!-- Inquire number of vertical soil layers
1659	CALL netcdf_data_input_get_dimension_length( id_surf, &
1660	root_area_density_lad_f%nz, &
1661	'zsoil' )
1662	!
1663	!-- Allocate variable
1664	ALLOCATE( root_area_density_lad_f%var &
1665	(0:root_area_density_lad_f%nz-1, &
1666	nys:nyn,nxl:nxr) )
1667
1668	CALL get_variable( id_surf, 'root_area_dens_r', &
1669	root_area_density_lad_f%var, &
1670	nxl, nxr, nys, nyn, &
1671	0, root_area_density_lad_f%nz-1 )
1672	ELSE
1673	root_area_density_lad_f%from_file = .FALSE.
1674	ENDIF
1675	!
1676	!-- Finally, close input file
1677	CALL close_input_file( id_surf )
1678	#endif
1679	ENDIF
1680	!
1681	!-- Deallocate variable list. Will be re-allocated in case further
1682	!-- variables are read from file.
1683	IF ( ALLOCATED( var_names ) ) DEALLOCATE( var_names )
1684	!
1685	!-- Skip the following if no land-surface or urban-surface module are
1686	!-- applied. This case, no one of the following variables is used anyway.
1687	IF ( .NOT. land_surface .AND. .NOT. urban_surface ) RETURN
1688
1689	#if defined ( __netcdf )
1690	!
1691	!-- Open file in read-only mode
1692	CALL open_read_file( TRIM( input_file_static ) // &
1693	TRIM( coupling_char ) , id_surf )
1694	!
1695	!-- Inquire all variable names.
1696	!-- This will be used to check whether an optional input variable exist
1697	!-- or not.
1698	CALL inquire_num_variables( id_surf, num_vars )
1699
1700	ALLOCATE( var_names(1:num_vars) )
1701	CALL inquire_variable_names( id_surf, var_names )
1702	!
1703	!-- Read vegetation type and required attributes
1704	IF ( check_existence( var_names, 'vegetation_type' ) ) THEN
1705	vegetation_type_f%from_file = .TRUE.
1706	CALL get_attribute( id_surf, char_fill, &
1707	vegetation_type_f%fill, &
1708	.FALSE., 'vegetation_type' )
1709
1710	ALLOCATE ( vegetation_type_f%var(nys:nyn,nxl:nxr) )
1711
1712	CALL get_variable( id_surf, 'vegetation_type', &
1713	vegetation_type_f%var, nxl, nxr, nys, nyn )
1714	ELSE
1715	vegetation_type_f%from_file = .FALSE.
1716	ENDIF
1717
1718	!
1719	!-- Read soil type and required attributes
1720	IF ( check_existence( var_names, 'soil_type' ) ) THEN
1721	soil_type_f%from_file = .TRUE.
1722	!
1723	!-- Note, lod is currently not on file; skip for the moment
1724	! CALL get_attribute( id_surf, char_lod, &
1725	! soil_type_f%lod, &
1726	! .FALSE., 'soil_type' )
1727	CALL get_attribute( id_surf, char_fill, &
1728	soil_type_f%fill, &
1729	.FALSE., 'soil_type' )
1730
1731	IF ( soil_type_f%lod == 1 ) THEN
1732
1733	ALLOCATE ( soil_type_f%var_2d(nys:nyn,nxl:nxr) )
1734
1735	CALL get_variable( id_surf, 'soil_type', soil_type_f%var_2d, &
1736	nxl, nxr, nys, nyn )
1737
1738	ELSEIF ( soil_type_f%lod == 2 ) THEN
1739	!
1740	!-- Obtain number of soil layers from file.
1741	CALL netcdf_data_input_get_dimension_length( id_surf, nz_soil, &
1742	'zsoil' )
1743
1744	ALLOCATE ( soil_type_f%var_3d(0:nz_soil,nys:nyn,nxl:nxr) )
1745
1746	CALL get_variable( id_surf, 'soil_type', soil_type_f%var_3d, &
1747	nxl, nxr, nys, nyn, 0, nz_soil )
1748
1749	ENDIF
1750	ELSE
1751	soil_type_f%from_file = .FALSE.
1752	ENDIF
1753
1754	!
1755	!-- Read pavement type and required attributes
1756	IF ( check_existence( var_names, 'pavement_type' ) ) THEN
1757	pavement_type_f%from_file = .TRUE.
1758	CALL get_attribute( id_surf, char_fill, &
1759	pavement_type_f%fill, .FALSE., &
1760	'pavement_type' )
1761
1762	ALLOCATE ( pavement_type_f%var(nys:nyn,nxl:nxr) )
1763
1764	CALL get_variable( id_surf, 'pavement_type', pavement_type_f%var, &
1765	nxl, nxr, nys, nyn )
1766	ELSE
1767	pavement_type_f%from_file = .FALSE.
1768	ENDIF
1769
1770	!
1771	!-- Read water type and required attributes
1772	IF ( check_existence( var_names, 'water_type' ) ) THEN
1773	water_type_f%from_file = .TRUE.
1774	CALL get_attribute( id_surf, char_fill, water_type_f%fill, &
1775	.FALSE., 'water_type' )
1776
1777	ALLOCATE ( water_type_f%var(nys:nyn,nxl:nxr) )
1778
1779	CALL get_variable( id_surf, 'water_type', water_type_f%var, &
1780	nxl, nxr, nys, nyn )
1781
1782	ELSE
1783	water_type_f%from_file = .FALSE.
1784	ENDIF
1785	!
1786	!-- Read relative surface fractions of vegetation, pavement and water.
1787	IF ( check_existence( var_names, 'surface_fraction' ) ) THEN
1788	surface_fraction_f%from_file = .TRUE.
1789	CALL get_attribute( id_surf, char_fill, &
1790	surface_fraction_f%fill, &
1791	.FALSE., 'surface_fraction' )
1792	!
1793	!-- Inquire number of surface fractions
1794	CALL netcdf_data_input_get_dimension_length( id_surf, &
1795	surface_fraction_f%nf, &
1796	'nsurface_fraction' )
1797	!
1798	!-- Allocate dimension array and input array for surface fractions
1799	ALLOCATE( surface_fraction_f%nfracs(0:surface_fraction_f%nf-1) )
1800	ALLOCATE( surface_fraction_f%frac(0:surface_fraction_f%nf-1, &
1801	nys:nyn,nxl:nxr) )
1802	!
1803	!-- Get dimension of surface fractions
1804	CALL get_variable( id_surf, 'nsurface_fraction', &
1805	surface_fraction_f%nfracs )
1806	!
1807	!-- Read surface fractions
1808	CALL get_variable( id_surf, 'surface_fraction', &
1809	surface_fraction_f%frac, nxl, nxr, nys, nyn, &
1810	0, surface_fraction_f%nf-1 )
1811	ELSE
1812	surface_fraction_f%from_file = .FALSE.
1813	ENDIF
1814	!
1815	!-- Read building parameters and related information
1816	IF ( check_existence( var_names, 'building_pars' ) ) THEN
1817	building_pars_f%from_file = .TRUE.
1818	CALL get_attribute( id_surf, char_fill, &
1819	building_pars_f%fill, &
1820	.FALSE., 'building_pars' )
1821	!
1822	!-- Inquire number of building parameters
1823	CALL netcdf_data_input_get_dimension_length( id_surf, &
1824	building_pars_f%np, &
1825	'nbuilding_pars' )
1826	!
1827	!-- Allocate dimension array and input array for building parameters
1828	ALLOCATE( building_pars_f%pars(0:building_pars_f%np-1) )
1829	ALLOCATE( building_pars_f%pars_xy(0:building_pars_f%np-1, &
1830	nys:nyn,nxl:nxr) )
1831	!
1832	!-- Get dimension of building parameters
1833	CALL get_variable( id_surf, 'nbuilding_pars', &
1834	building_pars_f%pars )
1835	!
1836	!-- Read building_pars
1837	CALL get_variable( id_surf, 'building_pars', &
1838	building_pars_f%pars_xy, nxl, nxr, nys, nyn, &
1839	0, building_pars_f%np-1 )
1840	ELSE
1841	building_pars_f%from_file = .FALSE.
1842	ENDIF
1843
1844	!
1845	!-- Read albedo type and required attributes
1846	IF ( check_existence( var_names, 'albedo_type' ) ) THEN
1847	albedo_type_f%from_file = .TRUE.
1848	CALL get_attribute( id_surf, char_fill, albedo_type_f%fill, &
1849	.FALSE., 'albedo_type' )
1850
1851	ALLOCATE ( albedo_type_f%var(nys:nyn,nxl:nxr) )
1852
1853	CALL get_variable( id_surf, 'albedo_type', albedo_type_f%var, &
1854	nxl, nxr, nys, nyn )
1855	ELSE
1856	albedo_type_f%from_file = .FALSE.
1857	ENDIF
1858	!
1859	!-- Read albedo parameters and related information
1860	IF ( check_existence( var_names, 'albedo_pars' ) ) THEN
1861	albedo_pars_f%from_file = .TRUE.
1862	CALL get_attribute( id_surf, char_fill, albedo_pars_f%fill, &
1863	.FALSE., 'albedo_pars' )
1864	!
1865	!-- Inquire number of albedo parameters
1866	CALL netcdf_data_input_get_dimension_length( id_surf, &
1867	albedo_pars_f%np, &
1868	'nalbedo_pars' )
1869	!
1870	!-- Allocate dimension array and input array for albedo parameters
1871	ALLOCATE( albedo_pars_f%pars(0:albedo_pars_f%np-1) )
1872	ALLOCATE( albedo_pars_f%pars_xy(0:albedo_pars_f%np-1, &
1873	nys:nyn,nxl:nxr) )
1874	!
1875	!-- Get dimension of albedo parameters
1876	CALL get_variable( id_surf, 'nalbedo_pars', albedo_pars_f%pars )
1877
1878	CALL get_variable( id_surf, 'albedo_pars', albedo_pars_f%pars_xy, &
1879	nxl, nxr, nys, nyn, &
1880	0, albedo_pars_f%np-1 )
1881	ELSE
1882	albedo_pars_f%from_file = .FALSE.
1883	ENDIF
1884
1885	!
1886	!-- Read pavement parameters and related information
1887	IF ( check_existence( var_names, 'pavement_pars' ) ) THEN
1888	pavement_pars_f%from_file = .TRUE.
1889	CALL get_attribute( id_surf, char_fill, &
1890	pavement_pars_f%fill, &
1891	.FALSE., 'pavement_pars' )
1892	!
1893	!-- Inquire number of pavement parameters
1894	CALL netcdf_data_input_get_dimension_length( id_surf, &
1895	pavement_pars_f%np, &
1896	'npavement_pars' )
1897	!
1898	!-- Allocate dimension array and input array for pavement parameters
1899	ALLOCATE( pavement_pars_f%pars(0:pavement_pars_f%np-1) )
1900	ALLOCATE( pavement_pars_f%pars_xy(0:pavement_pars_f%np-1, &
1901	nys:nyn,nxl:nxr) )
1902	!
1903	!-- Get dimension of pavement parameters
1904	CALL get_variable( id_surf, 'npavement_pars', pavement_pars_f%pars )
1905
1906	CALL get_variable( id_surf, 'pavement_pars', pavement_pars_f%pars_xy,&
1907	nxl, nxr, nys, nyn, &
1908	0, pavement_pars_f%np-1 )
1909	ELSE
1910	pavement_pars_f%from_file = .FALSE.
1911	ENDIF
1912
1913	!
1914	!-- Read pavement subsurface parameters and related information
1915	IF ( check_existence( var_names, 'pavement_subsurface_pars' ) ) &
1916	THEN
1917	pavement_subsurface_pars_f%from_file = .TRUE.
1918	CALL get_attribute( id_surf, char_fill, &
1919	pavement_subsurface_pars_f%fill, &
1920	.FALSE., 'pavement_subsurface_pars' )
1921	!
1922	!-- Inquire number of parameters
1923	CALL netcdf_data_input_get_dimension_length( id_surf, &
1924	pavement_subsurface_pars_f%np, &
1925	'npavement_subsurface_pars' )
1926	!
1927	!-- Inquire number of soil layers
1928	CALL netcdf_data_input_get_dimension_length( id_surf, &
1929	pavement_subsurface_pars_f%nz, &
1930	'zsoil' )
1931	!
1932	!-- Allocate dimension array and input array for pavement parameters
1933	ALLOCATE( pavement_subsurface_pars_f%pars &
1934	(0:pavement_subsurface_pars_f%np-1) )
1935	ALLOCATE( pavement_subsurface_pars_f%pars_xyz &
1936	(0:pavement_subsurface_pars_f%np-1, &
1937	0:pavement_subsurface_pars_f%nz-1, &
1938	nys:nyn,nxl:nxr) )
1939	!
1940	!-- Get dimension of pavement parameters
1941	CALL get_variable( id_surf, 'npavement_subsurface_pars', &
1942	pavement_subsurface_pars_f%pars )
1943
1944	CALL get_variable( id_surf, 'pavement_subsurface_pars', &
1945	pavement_subsurface_pars_f%pars_xyz, &
1946	nxl, nxr, nys, nyn, &
1947	0, pavement_subsurface_pars_f%nz-1, &
1948	0, pavement_subsurface_pars_f%np-1 )
1949	ELSE
1950	pavement_subsurface_pars_f%from_file = .FALSE.
1951	ENDIF
1952
1953
1954	!
1955	!-- Read vegetation parameters and related information
1956	IF ( check_existence( var_names, 'vegetation_pars' ) ) THEN
1957	vegetation_pars_f%from_file = .TRUE.
1958	CALL get_attribute( id_surf, char_fill, &
1959	vegetation_pars_f%fill, &
1960	.FALSE., 'vegetation_pars' )
1961	!
1962	!-- Inquire number of vegetation parameters
1963	CALL netcdf_data_input_get_dimension_length( id_surf, &
1964	vegetation_pars_f%np, &
1965	'nvegetation_pars' )
1966	!
1967	!-- Allocate dimension array and input array for surface fractions
1968	ALLOCATE( vegetation_pars_f%pars(0:vegetation_pars_f%np-1) )
1969	ALLOCATE( vegetation_pars_f%pars_xy(0:vegetation_pars_f%np-1, &
1970	nys:nyn,nxl:nxr) )
1971	!
1972	!-- Get dimension of the parameters
1973	CALL get_variable( id_surf, 'nvegetation_pars', &
1974	vegetation_pars_f%pars )
1975
1976	CALL get_variable( id_surf, 'vegetation_pars', &
1977	vegetation_pars_f%pars_xy, nxl, nxr, nys, nyn, &
1978	0, vegetation_pars_f%np-1 )
1979	ELSE
1980	vegetation_pars_f%from_file = .FALSE.
1981	ENDIF
1982
1983	!
1984	!-- Read root parameters/distribution and related information
1985	IF ( check_existence( var_names, 'soil_pars' ) ) THEN
1986	soil_pars_f%from_file = .TRUE.
1987	CALL get_attribute( id_surf, char_fill, &
1988	soil_pars_f%fill, &
1989	.FALSE., 'soil_pars' )
1990
1991	CALL get_attribute( id_surf, char_lod, &
1992	soil_pars_f%lod, &
1993	.FALSE., 'soil_pars' )
1994
1995	!
1996	!-- Inquire number of soil parameters
1997	CALL netcdf_data_input_get_dimension_length( id_surf, &
1998	soil_pars_f%np, &
1999	'nsoil_pars' )
2000	!
2001	!-- Read parameters array
2002	ALLOCATE( soil_pars_f%pars(0:soil_pars_f%np-1) )
2003	CALL get_variable( id_surf, 'nsoil_pars', soil_pars_f%pars )
2004
2005	!
2006	!-- In case of level of detail 2, also inquire number of vertical
2007	!-- soil layers, allocate memory and read the respective dimension
2008	IF ( soil_pars_f%lod == 2 ) THEN
2009	CALL netcdf_data_input_get_dimension_length( id_surf, &
2010	soil_pars_f%nz, &
2011	'zsoil' )
2012
2013	ALLOCATE( soil_pars_f%layers(0:soil_pars_f%nz-1) )
2014	CALL get_variable( id_surf, 'zsoil', soil_pars_f%layers )
2015
2016	ENDIF
2017
2018	!
2019	!-- Read soil parameters, depending on level of detail
2020	IF ( soil_pars_f%lod == 1 ) THEN
2021	ALLOCATE( soil_pars_f%pars_xy(0:soil_pars_f%np-1, &
2022	nys:nyn,nxl:nxr) )
2023
2024	CALL get_variable( id_surf, 'soil_pars', soil_pars_f%pars_xy, &
2025	nxl, nxr, nys, nyn, 0, soil_pars_f%np-1 )
2026
2027	ELSEIF ( soil_pars_f%lod == 2 ) THEN
2028	ALLOCATE( soil_pars_f%pars_xyz(0:soil_pars_f%np-1, &
2029	0:soil_pars_f%nz-1, &
2030	nys:nyn,nxl:nxr) )
2031	CALL get_variable( id_surf, 'soil_pars', &
2032	soil_pars_f%pars_xyz, &
2033	nxl, nxr, nys, nyn, 0, soil_pars_f%nz-1, &
2034	0, soil_pars_f%np-1 )
2035
2036	ENDIF
2037	ELSE
2038	soil_pars_f%from_file = .FALSE.
2039	ENDIF
2040
2041	!
2042	!-- Read water parameters and related information
2043	IF ( check_existence( var_names, 'water_pars' ) ) THEN
2044	water_pars_f%from_file = .TRUE.
2045	CALL get_attribute( id_surf, char_fill, &
2046	water_pars_f%fill, &
2047	.FALSE., 'water_pars' )
2048	!
2049	!-- Inquire number of water parameters
2050	CALL netcdf_data_input_get_dimension_length( id_surf, &
2051	water_pars_f%np, &
2052	'nwater_pars' )
2053	!
2054	!-- Allocate dimension array and input array for water parameters
2055	ALLOCATE( water_pars_f%pars(0:water_pars_f%np-1) )
2056	ALLOCATE( water_pars_f%pars_xy(0:water_pars_f%np-1, &
2057	nys:nyn,nxl:nxr) )
2058	!
2059	!-- Get dimension of water parameters
2060	CALL get_variable( id_surf, 'nwater_pars', water_pars_f%pars )
2061
2062	CALL get_variable( id_surf, 'water_pars', water_pars_f%pars_xy, &
2063	nxl, nxr, nys, nyn, 0, water_pars_f%np-1 )
2064	ELSE
2065	water_pars_f%from_file = .FALSE.
2066	ENDIF
2067	!
2068	!-- Read root area density - parametrized vegetation
2069	IF ( check_existence( var_names, 'root_area_dens_s' ) ) THEN
2070	root_area_density_lsm_f%from_file = .TRUE.
2071	CALL get_attribute( id_surf, char_fill, &
2072	root_area_density_lsm_f%fill, &
2073	.FALSE., 'root_area_dens_s' )
2074	!
2075	!-- Obtain number of soil layers from file and allocate variable
2076	CALL netcdf_data_input_get_dimension_length( id_surf, &
2077	root_area_density_lsm_f%nz, &
2078	'zsoil' )
2079	ALLOCATE( root_area_density_lsm_f%var &
2080	(0:root_area_density_lsm_f%nz-1, &
2081	nys:nyn,nxl:nxr) )
2082
2083	!
2084	!-- Read root-area density
2085	CALL get_variable( id_surf, 'root_area_dens_s', &
2086	root_area_density_lsm_f%var, &
2087	nxl, nxr, nys, nyn, &
2088	0, root_area_density_lsm_f%nz-1 )
2089
2090	ELSE
2091	root_area_density_lsm_f%from_file = .FALSE.
2092	ENDIF
2093	!
2094	!-- Read street type and street crossing
2095	IF ( check_existence( var_names, 'street_type' ) ) THEN
2096	street_type_f%from_file = .TRUE.
2097	CALL get_attribute( id_surf, char_fill, &
2098	street_type_f%fill, .FALSE., &
2099	'street_type' )
2100
2101	ALLOCATE ( street_type_f%var(nys:nyn,nxl:nxr) )
2102
2103	CALL get_variable( id_surf, 'street_type', street_type_f%var, &
2104	nxl, nxr, nys, nyn )
2105	ELSE
2106	street_type_f%from_file = .FALSE.
2107	ENDIF
2108
2109	IF ( check_existence( var_names, 'street_crossing' ) ) THEN
2110	street_crossing_f%from_file = .TRUE.
2111	CALL get_attribute( id_surf, char_fill, &
2112	street_crossing_f%fill, .FALSE., &
2113	'street_crossing' )
2114
2115	ALLOCATE ( street_crossing_f%var(nys:nyn,nxl:nxr) )
2116
2117	CALL get_variable( id_surf, 'street_crossing', &
2118	street_crossing_f%var, nxl, nxr, nys, nyn )
2119
2120	ELSE
2121	street_crossing_f%from_file = .FALSE.
2122	ENDIF
2123	!
2124	!-- Still missing: root_resolved and building_surface_pars.
2125	!-- Will be implemented as soon as they are available.
2126
2127	!
2128	!-- Finally, close input file
2129	CALL close_input_file( id_surf )
2130	#endif
2131	!
2132	!-- End of CPU measurement
2133	CALL cpu_log( log_point_s(82), 'NetCDF input', 'stop' )
2134	!
2135	!-- Exchange ghost points for surface variables. Therefore, resize
2136	!-- variables.
2137	IF ( albedo_type_f%from_file ) THEN
2138	CALL resize_array_2d_int8( albedo_type_f%var, nys, nyn, nxl, nxr )
2139	CALL exchange_horiz_2d_byte( albedo_type_f%var, nys, nyn, nxl, nxr, &
2140	nbgp )
2141	ENDIF
2142	IF ( pavement_type_f%from_file ) THEN
2143	CALL resize_array_2d_int8( pavement_type_f%var, nys, nyn, nxl, nxr )
2144	CALL exchange_horiz_2d_byte( pavement_type_f%var, nys, nyn, nxl, nxr,&
2145	nbgp )
2146	ENDIF
2147	IF ( soil_type_f%from_file .AND. ALLOCATED( soil_type_f%var_2d ) ) THEN
2148	CALL resize_array_2d_int8( soil_type_f%var_2d, nys, nyn, nxl, nxr )
2149	CALL exchange_horiz_2d_byte( soil_type_f%var_2d, nys, nyn, nxl, nxr, &
2150	nbgp )
2151	ENDIF
2152	IF ( vegetation_type_f%from_file ) THEN
2153	CALL resize_array_2d_int8( vegetation_type_f%var, nys, nyn, nxl, nxr )
2154	CALL exchange_horiz_2d_byte( vegetation_type_f%var, nys, nyn, nxl, &
2155	nxr, nbgp )
2156	ENDIF
2157	IF ( water_type_f%from_file ) THEN
2158	CALL resize_array_2d_int8( water_type_f%var, nys, nyn, nxl, nxr )
2159	CALL exchange_horiz_2d_byte( water_type_f%var, nys, nyn, nxl, nxr, &
2160	nbgp )
2161	ENDIF
2162	!
2163	!-- Exchange ghost points for 3/4-D variables. For the sake of simplicity,
2164	!-- loop further dimensions to use 2D exchange routines. Unfortunately this
2165	!-- is necessary, else new MPI-data types need to be introduced just for
2166	!-- 2 variables.
2167	IF ( soil_type_f%from_file .AND. ALLOCATED( soil_type_f%var_3d ) ) &
2168	THEN
2169	CALL resize_array_3d_int8( soil_type_f%var_3d, 0, nz_soil, &
2170	nys, nyn, nxl, nxr )
2171	DO k = 0, nz_soil
2172	CALL exchange_horiz_2d_int( &
2173	soil_type_f%var_3d(k,:,:), nys, nyn, nxl, nxr, nbgp )
2174	ENDDO
2175	ENDIF
2176
2177	IF ( surface_fraction_f%from_file ) THEN
2178	CALL resize_array_3d_real( surface_fraction_f%frac, &
2179	0, surface_fraction_f%nf-1, &
2180	nys, nyn, nxl, nxr )
2181	DO k = 0, surface_fraction_f%nf-1
2182	CALL exchange_horiz_2d( surface_fraction_f%frac(k,:,:), nbgp )
2183	ENDDO
2184	ENDIF
2185
2186	IF ( building_pars_f%from_file ) THEN
2187	CALL resize_array_3d_real( building_pars_f%pars_xy, &
2188	0, building_pars_f%np-1, &
2189	nys, nyn, nxl, nxr )
2190	DO k = 0, building_pars_f%np-1
2191	CALL exchange_horiz_2d( building_pars_f%pars_xy(k,:,:), nbgp )
2192	ENDDO
2193	ENDIF
2194
2195	IF ( albedo_pars_f%from_file ) THEN
2196	CALL resize_array_3d_real( albedo_pars_f%pars_xy, &
2197	0, albedo_pars_f%np-1, &
2198	nys, nyn, nxl, nxr )
2199	DO k = 0, albedo_pars_f%np-1
2200	CALL exchange_horiz_2d( albedo_pars_f%pars_xy(k,:,:), nbgp )
2201	ENDDO
2202	ENDIF
2203
2204	IF ( pavement_pars_f%from_file ) THEN
2205	CALL resize_array_3d_real( pavement_pars_f%pars_xy, &
2206	0, pavement_pars_f%np-1, &
2207	nys, nyn, nxl, nxr )
2208	DO k = 0, pavement_pars_f%np-1
2209	CALL exchange_horiz_2d( pavement_pars_f%pars_xy(k,:,:), nbgp )
2210	ENDDO
2211	ENDIF
2212
2213	IF ( vegetation_pars_f%from_file ) THEN
2214	CALL resize_array_3d_real( vegetation_pars_f%pars_xy, &
2215	0, vegetation_pars_f%np-1, &
2216	nys, nyn, nxl, nxr )
2217	DO k = 0, vegetation_pars_f%np-1
2218	CALL exchange_horiz_2d( vegetation_pars_f%pars_xy(k,:,:), nbgp )
2219	ENDDO
2220	ENDIF
2221
2222	IF ( water_pars_f%from_file ) THEN
2223	CALL resize_array_3d_real( water_pars_f%pars_xy, &
2224	0, water_pars_f%np-1, &
2225	nys, nyn, nxl, nxr )
2226	DO k = 0, water_pars_f%np-1
2227	CALL exchange_horiz_2d( water_pars_f%pars_xy(k,:,:), nbgp )
2228	ENDDO
2229	ENDIF
2230
2231	IF ( root_area_density_lsm_f%from_file ) THEN
2232	CALL resize_array_3d_real( root_area_density_lsm_f%var, &
2233	0, root_area_density_lsm_f%nz-1, &
2234	nys, nyn, nxl, nxr )
2235	DO k = 0, root_area_density_lsm_f%nz-1
2236	CALL exchange_horiz_2d( root_area_density_lsm_f%var(k,:,:), nbgp )
2237	ENDDO
2238	ENDIF
2239
2240	IF ( soil_pars_f%from_file ) THEN
2241	IF ( soil_pars_f%lod == 1 ) THEN
2242
2243	CALL resize_array_3d_real( soil_pars_f%pars_xy, &
2244	0, soil_pars_f%np-1, &
2245	nys, nyn, nxl, nxr )
2246	DO k = 0, soil_pars_f%np-1
2247	CALL exchange_horiz_2d( soil_pars_f%pars_xy(k,:,:), nbgp )
2248	ENDDO
2249
2250	ELSEIF ( soil_pars_f%lod == 2 ) THEN
2251	CALL resize_array_4d_real( soil_pars_f%pars_xyz, &
2252	0, soil_pars_f%np-1, &
2253	0, soil_pars_f%nz-1, &
2254	nys, nyn, nxl, nxr )
2255
2256	DO k2 = 0, soil_pars_f%nz-1
2257	DO k = 0, soil_pars_f%np-1
2258	CALL exchange_horiz_2d( soil_pars_f%pars_xyz(k,k2,:,:), &
2259	nbgp )
2260	ENDDO
2261	ENDDO
2262	ENDIF
2263	ENDIF
2264
2265	IF ( pavement_subsurface_pars_f%from_file ) THEN
2266	CALL resize_array_4d_real( pavement_subsurface_pars_f%pars_xyz, &
2267	0, pavement_subsurface_pars_f%np-1, &
2268	0, pavement_subsurface_pars_f%nz-1, &
2269	nys, nyn, nxl, nxr )
2270
2271	DO k2 = 0, pavement_subsurface_pars_f%nz-1
2272	DO k = 0, pavement_subsurface_pars_f%np-1
2273	CALL exchange_horiz_2d( &
2274	pavement_subsurface_pars_f%pars_xyz(k,k2,:,:), nbgp )
2275	ENDDO
2276	ENDDO
2277	ENDIF
2278
2279	END SUBROUTINE netcdf_data_input_surface_data
2280
2281	!------------------------------------------------------------------------------!
2282	! Description:
2283	! ------------
2284	!> Reads uvem lookup table information.
2285	!------------------------------------------------------------------------------!
2286	SUBROUTINE netcdf_data_input_uvem
2287
2288	USE indices, &
2289	ONLY: nxl, nxr, nyn, nys
2290
2291	IMPLICIT NONE
2292
2293	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
2294
2295
2296	INTEGER(iwp) :: id_uvem !< NetCDF id of uvem lookup table input file
2297	INTEGER(iwp) :: nli = 35 !< dimension length of lookup table in x
2298	INTEGER(iwp) :: nlj = 9 !< dimension length of lookup table in y
2299	INTEGER(iwp) :: nlk = 90 !< dimension length of lookup table in z
2300	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2301	!
2302	!-- Input via uv exposure model lookup table input
2303	IF ( input_pids_uvem ) THEN
2304
2305	#if defined ( __netcdf )
2306	!
2307	!-- Open file in read-only mode
2308	CALL open_read_file( TRIM( input_file_uvem ) // &
2309	TRIM( coupling_char ), id_uvem )
2310	!
2311	!-- At first, inquire all variable names.
2312	!-- This will be used to check whether an input variable exist or not.
2313	CALL inquire_num_variables( id_uvem, num_vars )
2314	!
2315	!-- Allocate memory to store variable names and inquire them.
2316	ALLOCATE( var_names(1:num_vars) )
2317	CALL inquire_variable_names( id_uvem, var_names )
2318	!
2319	!-- uvem integration
2320	IF ( check_existence( var_names, 'int_factors' ) ) THEN
2321	uvem_integration_f%from_file = .TRUE.
2322	!
2323	!-- Input 2D uvem integration.
2324	ALLOCATE ( uvem_integration_f%var(0:nlj,0:nli) )
2325
2326	CALL get_variable( id_uvem, 'int_factors', uvem_integration_f%var, 0, nli, 0, nlj )
2327	ELSE
2328	uvem_integration_f%from_file = .FALSE.
2329	ENDIF
2330	!
2331	!-- uvem irradiance
2332	IF ( check_existence( var_names, 'irradiance' ) ) THEN
2333	uvem_irradiance_f%from_file = .TRUE.
2334	!
2335	!-- Input 2D uvem irradiance.
2336	ALLOCATE ( uvem_irradiance_f%var(0:nlk, 0:2) )
2337
2338	CALL get_variable( id_uvem, 'irradiance', uvem_irradiance_f%var, 0, 2, 0, nlk )
2339	ELSE
2340	uvem_irradiance_f%from_file = .FALSE.
2341	ENDIF
2342	!
2343	!-- uvem porjection areas
2344	IF ( check_existence( var_names, 'projarea' ) ) THEN
2345	uvem_projarea_f%from_file = .TRUE.
2346	!
2347	!-- Input 3D uvem projection area (human geometgry)
2348	ALLOCATE ( uvem_projarea_f%var(0:2,0:nlj,0:nli) )
2349
2350	CALL get_variable( id_uvem, 'projarea', uvem_projarea_f%var, 0, nli, 0, nlj, 0, 2 )
2351	ELSE
2352	uvem_projarea_f%from_file = .FALSE.
2353	ENDIF
2354	!
2355	!-- uvem radiance
2356	IF ( check_existence( var_names, 'radiance' ) ) THEN
2357	uvem_radiance_f%from_file = .TRUE.
2358	!
2359	!-- Input 3D uvem radiance
2360	ALLOCATE ( uvem_radiance_f%var(0:nlk,0:nlj,0:nli) )
2361
2362	CALL get_variable( id_uvem, 'radiance', uvem_radiance_f%var, 0, nli, 0, nlj, 0, nlk )
2363	ELSE
2364	uvem_radiance_f%from_file = .FALSE.
2365	ENDIF
2366	!
2367	!-- Read building obstruction
2368	IF ( check_existence( var_names, 'obstruction' ) ) THEN
2369	building_obstruction_full%from_file = .TRUE.
2370	!-- Input 3D uvem building obstruction
2371	ALLOCATE ( building_obstruction_full%var_3d(0:44,0:2,0:2) )
2372	CALL get_variable( id_uvem, 'obstruction', building_obstruction_full%var_3d,0, 2, 0, 2, 0, 44 )
2373	ELSE
2374	building_obstruction_full%from_file = .FALSE.
2375	ENDIF
2376	!
2377	IF ( check_existence( var_names, 'obstruction' ) ) THEN
2378	building_obstruction_f%from_file = .TRUE.
2379	!
2380	!-- Input 3D uvem building obstruction
2381	ALLOCATE ( building_obstruction_f%var_3d(0:44,nys:nyn,nxl:nxr) )
2382	!
2383	CALL get_variable( id_uvem, 'obstruction', building_obstruction_f%var_3d, &
2384	nxl, nxr, nys, nyn, 0, 44 )
2385	ELSE
2386	building_obstruction_f%from_file = .FALSE.
2387	ENDIF
2388	!
2389	!-- Close uvem lookup table input file
2390	CALL close_input_file( id_uvem )
2391	#else
2392	CONTINUE
2393	#endif
2394	ENDIF
2395	END SUBROUTINE netcdf_data_input_uvem
2396
2397	!------------------------------------------------------------------------------!
2398	! Description:
2399	! ------------
2400	!> Reads orography and building information.
2401	!------------------------------------------------------------------------------!
2402	SUBROUTINE netcdf_data_input_topo
2403
2404	USE control_parameters, &
2405	ONLY: bc_lr_cyc, bc_ns_cyc, message_string, topography
2406
2407	USE indices, &
2408	ONLY: nbgp, nx, nxl, nxr, ny, nyn, nys, nzb
2409
2410
2411	IMPLICIT NONE
2412
2413	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
2414
2415
2416	INTEGER(iwp) :: i !< running index along x-direction
2417	INTEGER(iwp) :: ii !< running index for IO blocks
2418	INTEGER(iwp) :: id_topo !< NetCDF id of topograhy input file
2419	INTEGER(iwp) :: j !< running index along y-direction
2420	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2421	INTEGER(iwp) :: skip_n_rows !< counting variable to skip rows while reading topography file
2422
2423	REAL(wp) :: dum !< dummy variable to skip columns while reading topography file
2424	!
2425	!-- CPU measurement
2426	CALL cpu_log( log_point_s(83), 'NetCDF/ASCII input topo', 'start' )
2427
2428	!
2429	!-- Input via palm-input data standard
2430	IF ( input_pids_static ) THEN
2431	#if defined ( __netcdf )
2432	!
2433	!-- Open file in read-only mode
2434	CALL open_read_file( TRIM( input_file_static ) // &
2435	TRIM( coupling_char ), id_topo )
2436	!
2437	!-- At first, inquire all variable names.
2438	!-- This will be used to check whether an input variable exist
2439	!-- or not.
2440	CALL inquire_num_variables( id_topo, num_vars )
2441	!
2442	!-- Allocate memory to store variable names and inquire them.
2443	ALLOCATE( var_names(1:num_vars) )
2444	CALL inquire_variable_names( id_topo, var_names )
2445	!
2446	!-- Read x, y - dimensions. Only required for consistency checks.
2447	CALL netcdf_data_input_get_dimension_length( id_topo, dim_static%nx, 'x' )
2448	CALL netcdf_data_input_get_dimension_length( id_topo, dim_static%ny, 'y' )
2449	ALLOCATE( dim_static%x(0:dim_static%nx-1) )
2450	ALLOCATE( dim_static%y(0:dim_static%ny-1) )
2451	CALL get_variable( id_topo, 'x', dim_static%x )
2452	CALL get_variable( id_topo, 'y', dim_static%y )
2453	!
2454	!-- Terrain height. First, get variable-related _FillValue attribute
2455	IF ( check_existence( var_names, 'zt' ) ) THEN
2456	terrain_height_f%from_file = .TRUE.
2457	CALL get_attribute( id_topo, char_fill, terrain_height_f%fill, &
2458	.FALSE., 'zt' )
2459	!
2460	!-- Input 2D terrain height.
2461	ALLOCATE ( terrain_height_f%var(nys:nyn,nxl:nxr) )
2462
2463	CALL get_variable( id_topo, 'zt', terrain_height_f%var, &
2464	nxl, nxr, nys, nyn )
2465
2466	ELSE
2467	terrain_height_f%from_file = .FALSE.
2468	ENDIF
2469
2470	!
2471	!-- Read building height. First, read its _FillValue attribute,
2472	!-- as well as lod attribute
2473	buildings_f%from_file = .FALSE.
2474	IF ( check_existence( var_names, 'buildings_2d' ) ) THEN
2475	buildings_f%from_file = .TRUE.
2476	CALL get_attribute( id_topo, char_lod, buildings_f%lod, &
2477	.FALSE., 'buildings_2d' )
2478
2479	CALL get_attribute( id_topo, char_fill, buildings_f%fill1, &
2480	.FALSE., 'buildings_2d' )
2481
2482	!
2483	!-- Read 2D buildings
2484	IF ( buildings_f%lod == 1 ) THEN
2485	ALLOCATE ( buildings_f%var_2d(nys:nyn,nxl:nxr) )
2486
2487	CALL get_variable( id_topo, 'buildings_2d', &
2488	buildings_f%var_2d, &
2489	nxl, nxr, nys, nyn )
2490	ELSE
2491	message_string = 'NetCDF attribute lod ' // &
2492	'(level of detail) is not set ' // &
2493	'properly for buildings_2d.'
2494	CALL message( 'netcdf_data_input_mod', 'PA0540', &
2495	1, 2, 0, 6, 0 )
2496	ENDIF
2497	ENDIF
2498	!
2499	!-- If available, also read 3D building information. If both are
2500	!-- available, use 3D information.
2501	IF ( check_existence( var_names, 'buildings_3d' ) ) THEN
2502	buildings_f%from_file = .TRUE.
2503	CALL get_attribute( id_topo, char_lod, buildings_f%lod, &
2504	.FALSE., 'buildings_3d' )
2505
2506	CALL get_attribute( id_topo, char_fill, buildings_f%fill2, &
2507	.FALSE., 'buildings_3d' )
2508
2509	CALL netcdf_data_input_get_dimension_length( id_topo, &
2510	buildings_f%nz, 'z' )
2511	!
2512	!-- Read 3D buildings
2513	IF ( buildings_f%lod == 2 ) THEN
2514	ALLOCATE( buildings_f%z(nzb:buildings_f%nz-1) )
2515	CALL get_variable( id_topo, 'z', buildings_f%z )
2516
2517	ALLOCATE( buildings_f%var_3d(nzb:buildings_f%nz-1, &
2518	nys:nyn,nxl:nxr) )
2519	buildings_f%var_3d = 0
2520
2521	CALL get_variable( id_topo, 'buildings_3d', &
2522	buildings_f%var_3d, &
2523	nxl, nxr, nys, nyn, 0, buildings_f%nz-1 )
2524	ELSE
2525	message_string = 'NetCDF attribute lod ' // &
2526	'(level of detail) is not set ' // &
2527	'properly for buildings_3d.'
2528	CALL message( 'netcdf_data_input_mod', 'PA0541', &
2529	1, 2, 0, 6, 0 )
2530	ENDIF
2531	ENDIF
2532	!
2533	!-- Read building IDs and its FillValue attribute. Further required
2534	!-- for mapping buildings on top of orography.
2535	IF ( check_existence( var_names, 'building_id' ) ) THEN
2536	building_id_f%from_file = .TRUE.
2537	CALL get_attribute( id_topo, char_fill, &
2538	building_id_f%fill, .FALSE., &
2539	'building_id' )
2540
2541	ALLOCATE ( building_id_f%var(nys:nyn,nxl:nxr) )
2542
2543	CALL get_variable( id_topo, 'building_id', building_id_f%var, &
2544	nxl, nxr, nys, nyn )
2545	ELSE
2546	building_id_f%from_file = .FALSE.
2547	ENDIF
2548	!
2549	!-- Read building_type and required attributes.
2550	IF ( check_existence( var_names, 'building_type' ) ) THEN
2551	building_type_f%from_file = .TRUE.
2552	CALL get_attribute( id_topo, char_fill, &
2553	building_type_f%fill, .FALSE., &
2554	'building_type' )
2555
2556	ALLOCATE ( building_type_f%var(nys:nyn,nxl:nxr) )
2557
2558	CALL get_variable( id_topo, 'building_type', building_type_f%var, &
2559	nxl, nxr, nys, nyn )
2560
2561	ELSE
2562	building_type_f%from_file = .FALSE.
2563	ENDIF
2564	!
2565	!-- Close topography input file
2566	CALL close_input_file( id_topo )
2567	#else
2568	CONTINUE
2569	#endif
2570	!
2571	!-- ASCII input
2572	ELSEIF ( TRIM( topography ) == 'read_from_file' ) THEN
2573
2574	DO ii = 0, io_blocks-1
2575	IF ( ii == io_group ) THEN
2576
2577	OPEN( 90, FILE='TOPOGRAPHY_DATA'//TRIM( coupling_char ), &
2578	STATUS='OLD', FORM='FORMATTED', ERR=10 )
2579	!
2580	!-- Read topography PE-wise. Rows are read from nyn to nys, columns
2581	!-- are read from nxl to nxr. At first, ny-nyn rows need to be skipped.
2582	skip_n_rows = 0
2583	DO WHILE ( skip_n_rows < ny - nyn )
2584	READ( 90, * )
2585	skip_n_rows = skip_n_rows + 1
2586	ENDDO
2587	!
2588	!-- Read data from nyn to nys and nxl to nxr. Therefore, skip
2589	!-- column until nxl-1 is reached
2590	ALLOCATE ( buildings_f%var_2d(nys:nyn,nxl:nxr) )
2591	DO j = nyn, nys, -1
2592	READ( 90, *, ERR=11, END=11 ) &
2593	( dum, i = 0, nxl-1 ), &
2594	( buildings_f%var_2d(j,i), i = nxl, nxr )
2595	ENDDO
2596
2597	GOTO 12
2598
2599	10 message_string = 'file TOPOGRAPHY_DATA'// &
2600	TRIM( coupling_char )// ' does not exist'
2601	CALL message( 'netcdf_data_input_mod', 'PA0208', 1, 2, 0, 6, 0 )
2602
2603	11 message_string = 'errors in file TOPOGRAPHY_DATA'// &
2604	TRIM( coupling_char )
2605	CALL message( 'netcdf_data_input_mod', 'PA0209', 2, 2, 0, 6, 0 )
2606
2607	12 CLOSE( 90 )
2608	buildings_f%from_file = .TRUE.
2609
2610	ENDIF
2611	#if defined( __parallel )
2612	CALL MPI_BARRIER( comm2d, ierr )
2613	#endif
2614	ENDDO
2615
2616	ENDIF
2617	!
2618	!-- End of CPU measurement
2619	CALL cpu_log( log_point_s(83), 'NetCDF/ASCII input topo', 'stop' )
2620	!
2621	!-- Check for minimum requirement to setup building topography. If buildings
2622	!-- are provided, also an ID and a type are required.
2623	!-- Note, doing this check in check_parameters
2624	!-- will be too late (data will be used for grid inititialization before).
2625	IF ( input_pids_static ) THEN
2626	IF ( buildings_f%from_file .AND. &
2627	.NOT. building_id_f%from_file ) THEN
2628	message_string = 'If building heigths are prescribed in ' // &
2629	'static input file, also an ID is required.'
2630	CALL message( 'netcdf_data_input_mod', 'PA0542', 1, 2, 0, 6, 0 )
2631	ENDIF
2632	ENDIF
2633	!
2634	!-- In case no terrain height is provided by static input file, allocate
2635	!-- array nevertheless and set terrain height to 0, which simplifies
2636	!-- topography initialization.
2637	IF ( .NOT. terrain_height_f%from_file ) THEN
2638	ALLOCATE ( terrain_height_f%var(nys:nyn,nxl:nxr) )
2639	terrain_height_f%var = 0.0_wp
2640	ENDIF
2641	!
2642	!-- Finally, exchange 1 ghost point for building ID and type.
2643	!-- In case of non-cyclic boundary conditions set Neumann conditions at the
2644	!-- lateral boundaries.
2645	IF ( building_id_f%from_file ) THEN
2646	CALL resize_array_2d_int32( building_id_f%var, nys, nyn, nxl, nxr )
2647	CALL exchange_horiz_2d_int( building_id_f%var, nys, nyn, nxl, nxr, &
2648	nbgp )
2649	ENDIF
2650
2651	IF ( building_type_f%from_file ) THEN
2652	CALL resize_array_2d_int8( building_type_f%var, nys, nyn, nxl, nxr )
2653	CALL exchange_horiz_2d_byte( building_type_f%var, nys, nyn, nxl, nxr, &
2654	nbgp )
2655	ENDIF
2656
2657	END SUBROUTINE netcdf_data_input_topo
2658
2659	!------------------------------------------------------------------------------!
2660	! Description:
2661	! ------------
2662	!> Reads initialization data of u, v, w, pt, q, geostrophic wind components,
2663	!> as well as soil moisture and soil temperature, derived from larger-scale
2664	!> model (COSMO) by Inifor.
2665	!------------------------------------------------------------------------------!
2666	SUBROUTINE netcdf_data_input_init_3d
2667
2668	USE arrays_3d, &
2669	ONLY: q, pt, u, v, w, zu, zw
2670
2671	USE control_parameters, &
2672	ONLY: bc_lr_cyc, bc_ns_cyc, humidity, message_string, neutral
2673
2674	USE indices, &
2675	ONLY: nx, nxl, nxlu, nxr, ny, nyn, nys, nysv, nzb, nz, nzt
2676
2677	IMPLICIT NONE
2678
2679	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names
2680
2681	LOGICAL :: dynamic_3d = .TRUE. !< flag indicating that 3D data is read from dynamic file
2682
2683	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
2684	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2685
2686	LOGICAL :: check_passed !< flag indicating if a check passed
2687
2688	!
2689	!-- Skip routine if no input file with dynamic input data is available.
2690	IF ( .NOT. input_pids_dynamic ) RETURN
2691	!
2692	!-- Please note, Inifor is designed to provide initial data for u and v for
2693	!-- the prognostic grid points in case of lateral Dirichlet conditions.
2694	!-- This means that Inifor provides data from nxlu:nxr (for u) and
2695	!-- from nysv:nyn (for v) at the left and south domain boundary, respectively.
2696	!-- However, as work-around for the moment, PALM will run with cyclic
2697	!-- conditions and will be initialized with data provided by Inifor
2698	!-- boundaries in case of Dirichlet.
2699	!-- Hence, simply set set nxlu/nysv to 1 (will be reset to its original value
2700	!-- at the end of this routine.
2701	IF ( bc_lr_cyc .AND. nxl == 0 ) nxlu = 1
2702	IF ( bc_ns_cyc .AND. nys == 0 ) nysv = 1
2703
2704	!
2705	!-- CPU measurement
2706	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'start' )
2707
2708	#if defined ( __netcdf )
2709	!
2710	!-- Open file in read-only mode
2711	CALL open_read_file( TRIM( input_file_dynamic ) // &
2712	TRIM( coupling_char ), id_dynamic )
2713
2714	!
2715	!-- At first, inquire all variable names.
2716	CALL inquire_num_variables( id_dynamic, num_vars )
2717	!
2718	!-- Allocate memory to store variable names.
2719	ALLOCATE( var_names(1:num_vars) )
2720	CALL inquire_variable_names( id_dynamic, var_names )
2721	!
2722	!-- Read vertical dimension of scalar und w grid.
2723	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzu, 'z' )
2724	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzw, 'zw' )
2725	!
2726	!-- Read also the horizontal dimensions. These are used just used fo
2727	!-- checking the compatibility with the PALM grid before reading.
2728	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nx, 'x' )
2729	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nxu, 'xu' )
2730	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%ny, 'y' )
2731	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nyv, 'yv' )
2732
2733	!
2734	!-- Check for correct horizontal and vertical dimension. Please note,
2735	!-- checks are performed directly here and not called from
2736	!-- check_parameters as some varialbes are still not allocated there.
2737	!-- Moreover, please note, u- and v-grid has 1 grid point less on
2738	!-- Inifor grid.
2739	IF ( init_3d%nx-1 /= nx .OR. init_3d%nxu-1 /= nx - 1 .OR. &
2740	init_3d%ny-1 /= ny .OR. init_3d%nyv-1 /= ny - 1 ) THEN
2741	message_string = 'Number of inifor horizontal grid points '// &
2742	'does not match the number of numeric grid '// &
2743	'points.'
2744	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
2745	ENDIF
2746
2747	IF ( init_3d%nzu /= nz ) THEN
2748	message_string = 'Number of inifor vertical grid points ' // &
2749	'does not match the number of numeric grid '// &
2750	'points.'
2751	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
2752	ENDIF
2753	!
2754	!-- Read vertical dimensions. Later, these are required for eventual
2755	!-- inter- and extrapolations of the initialization data.
2756	IF ( check_existence( var_names, 'z' ) ) THEN
2757	ALLOCATE( init_3d%zu_atmos(1:init_3d%nzu) )
2758	CALL get_variable( id_dynamic, 'z', init_3d%zu_atmos )
2759	ENDIF
2760	IF ( check_existence( var_names, 'zw' ) ) THEN
2761	ALLOCATE( init_3d%zw_atmos(1:init_3d%nzw) )
2762	CALL get_variable( id_dynamic, 'zw', init_3d%zw_atmos )
2763	ENDIF
2764	!
2765	!-- Check for consistency between vertical coordinates in dynamic
2766	!-- driver and numeric grid.
2767	!-- Please note, depending on compiler options both may be
2768	!-- equal up to a certain threshold, and differences between
2769	!-- the numeric grid and vertical coordinate in the driver can built-
2770	!-- up to 10E-1-10E-0 m. For this reason, the check is performed not
2771	!-- for exactly matching values.
2772	IF ( ANY( ABS( zu(1:nzt) - init_3d%zu_atmos(1:init_3d%nzu) ) &
2773	> 10E-1 ) .OR. &
2774	ANY( ABS( zw(1:nzt-1) - init_3d%zw_atmos(1:init_3d%nzw) ) &
2775	> 10E-1 ) ) THEN
2776	message_string = 'Vertical grid in dynamic driver does not '// &
2777	'match the numeric grid.'
2778	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
2779	ENDIF
2780	!
2781	!-- Read initial geostrophic wind components at
2782	!-- t = 0 (index 1 in file).
2783	IF ( check_existence( var_names, 'ls_forcing_ug' ) ) THEN
2784	ALLOCATE( init_3d%ug_init(nzb:nzt+1) )
2785	init_3d%ug_init = 0.0_wp
2786
2787	CALL get_variable_pr( id_dynamic, 'ls_forcing_ug', 1, &
2788	init_3d%ug_init(1:nzt) )
2789	!
2790	!-- Set top-boundary condition (Neumann)
2791	init_3d%ug_init(nzt+1) = init_3d%ug_init(nzt)
2792
2793	init_3d%from_file_ug = .TRUE.
2794	ELSE
2795	init_3d%from_file_ug = .FALSE.
2796	ENDIF
2797	IF ( check_existence( var_names, 'ls_forcing_vg' ) ) THEN
2798	ALLOCATE( init_3d%vg_init(nzb:nzt+1) )
2799	init_3d%vg_init = 0.0_wp
2800
2801	CALL get_variable_pr( id_dynamic, 'ls_forcing_vg', 1, &
2802	init_3d%vg_init(1:nzt) )
2803	!
2804	!-- Set top-boundary condition (Neumann)
2805	init_3d%vg_init(nzt+1) = init_3d%vg_init(nzt)
2806
2807	init_3d%from_file_vg = .TRUE.
2808	ELSE
2809	init_3d%from_file_vg = .FALSE.
2810	ENDIF
2811	!
2812	!-- Read inital 3D data of u, v, w, pt and q,
2813	!-- derived from COSMO model. Read PE-wise yz-slices.
2814	!-- Please note, the u-, v- and w-component are defined on different
2815	!-- grids with one element less in the x-, y-,
2816	!-- and z-direction, respectively. Hence, reading is subdivided
2817	!-- into separate loops.
2818	!-- Read u-component
2819	IF ( check_existence( var_names, 'init_atmosphere_u' ) ) THEN
2820	!
2821	!-- Read attributes for the fill value and level-of-detail
2822	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_u, &
2823	.FALSE., 'init_atmosphere_u' )
2824	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_u, &
2825	.FALSE., 'init_atmosphere_u' )
2826	!
2827	!-- level-of-detail 1 - read initialization profile
2828	IF ( init_3d%lod_u == 1 ) THEN
2829	ALLOCATE( init_3d%u_init(nzb:nzt+1) )
2830	init_3d%u_init = 0.0_wp
2831
2832	CALL get_variable( id_dynamic, 'init_atmosphere_u', &
2833	init_3d%u_init(nzb+1:nzt) )
2834	!
2835	!-- Set top-boundary condition (Neumann)
2836	init_3d%u_init(nzt+1) = init_3d%u_init(nzt)
2837	!
2838	!-- level-of-detail 2 - read 3D initialization data
2839	ELSEIF ( init_3d%lod_u == 2 ) THEN
2840	CALL get_variable( id_dynamic, 'init_atmosphere_u', &
2841	u(nzb+1:nzt,nys:nyn,nxlu:nxr), &
2842	nxlu, nys+1, nzb+1, &
2843	nxr-nxlu+1, nyn-nys+1, init_3d%nzu, &
2844	dynamic_3d )
2845	!
2846	!-- Set value at leftmost model grid point nxl = 0. This is because
2847	!-- Inifor provides data only from 1:nx-1 since it assumes non-cyclic
2848	!-- conditions.
2849	IF ( nxl == 0 ) &
2850	u(nzb+1:nzt,nys:nyn,nxl) = u(nzb+1:nzt,nys:nyn,nxlu)
2851	!
2852	!-- Set bottom and top-boundary
2853	u(nzb,:,:) = u(nzb+1,:,:)
2854	u(nzt+1,:,:) = u(nzt,:,:)
2855
2856	ENDIF
2857	init_3d%from_file_u = .TRUE.
2858	ELSE
2859	message_string = 'Missing initial data for u-component'
2860	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
2861	ENDIF
2862	!
2863	!-- Read v-component
2864	IF ( check_existence( var_names, 'init_atmosphere_v' ) ) THEN
2865	!
2866	!-- Read attributes for the fill value and level-of-detail
2867	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_v, &
2868	.FALSE., 'init_atmosphere_v' )
2869	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_v, &
2870	.FALSE., 'init_atmosphere_v' )
2871	!
2872	!-- level-of-detail 1 - read initialization profile
2873	IF ( init_3d%lod_v == 1 ) THEN
2874	ALLOCATE( init_3d%v_init(nzb:nzt+1) )
2875	init_3d%v_init = 0.0_wp
2876
2877	CALL get_variable( id_dynamic, 'init_atmosphere_v', &
2878	init_3d%v_init(nzb+1:nzt) )
2879	!
2880	!-- Set top-boundary condition (Neumann)
2881	init_3d%v_init(nzt+1) = init_3d%v_init(nzt)
2882	!
2883	!-- level-of-detail 2 - read 3D initialization data
2884	ELSEIF ( init_3d%lod_v == 2 ) THEN
2885
2886	CALL get_variable( id_dynamic, 'init_atmosphere_v', &
2887	v(nzb+1:nzt,nysv:nyn,nxl:nxr), &
2888	nxl+1, nysv, nzb+1, &
2889	nxr-nxl+1, nyn-nysv+1, init_3d%nzu, &
2890	dynamic_3d )
2891	!
2892	!-- Set value at southmost model grid point nys = 0. This is because
2893	!-- Inifor provides data only from 1:ny-1 since it assumes non-cyclic
2894	!-- conditions.
2895	IF ( nys == 0 ) &
2896	v(nzb+1:nzt,nys,nxl:nxr) = v(nzb+1:nzt,nysv,nxl:nxr)
2897	!
2898	!-- Set bottom and top-boundary
2899	v(nzb,:,:) = v(nzb+1,:,:)
2900	v(nzt+1,:,:) = v(nzt,:,:)
2901
2902	ENDIF
2903	init_3d%from_file_v = .TRUE.
2904	ELSE
2905	message_string = 'Missing initial data for v-component'
2906	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
2907	ENDIF
2908	!
2909	!-- Read w-component
2910	IF ( check_existence( var_names, 'init_atmosphere_w' ) ) THEN
2911	!
2912	!-- Read attributes for the fill value and level-of-detail
2913	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_w, &
2914	.FALSE., 'init_atmosphere_w' )
2915	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_w, &
2916	.FALSE., 'init_atmosphere_w' )
2917	!
2918	!-- level-of-detail 1 - read initialization profile
2919	IF ( init_3d%lod_w == 1 ) THEN
2920	ALLOCATE( init_3d%w_init(nzb:nzt+1) )
2921	init_3d%w_init = 0.0_wp
2922
2923	CALL get_variable( id_dynamic, 'init_atmosphere_w', &
2924	init_3d%w_init(nzb+1:nzt-1) )
2925	!
2926	!-- Set top-boundary condition (Neumann)
2927	init_3d%w_init(nzt:nzt+1) = init_3d%w_init(nzt-1)
2928	!
2929	!-- level-of-detail 2 - read 3D initialization data
2930	ELSEIF ( init_3d%lod_w == 2 ) THEN
2931
2932	CALL get_variable( id_dynamic, 'init_atmosphere_w', &
2933	w(nzb+1:nzt-1,nys:nyn,nxl:nxr), &
2934	nxl+1, nys+1, nzb+1, &
2935	nxr-nxl+1, nyn-nys+1, init_3d%nzw, &
2936	dynamic_3d )
2937	!
2938	!-- Set bottom and top-boundary
2939	w(nzb,:,:) = 0.0_wp
2940	w(nzt,:,:) = w(nzt-1,:,:)
2941	w(nzt+1,:,:) = w(nzt-1,:,:)
2942
2943	ENDIF
2944	init_3d%from_file_w = .TRUE.
2945	ELSE
2946	message_string = 'Missing initial data for w-component'
2947	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
2948	ENDIF
2949	!
2950	!-- Read potential temperature
2951	IF ( .NOT. neutral ) THEN
2952	IF ( check_existence( var_names, 'init_atmosphere_pt' ) ) THEN
2953	!
2954	!-- Read attributes for the fill value and level-of-detail
2955	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_pt, &
2956	.FALSE., 'init_atmosphere_pt' )
2957	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_pt, &
2958	.FALSE., 'init_atmosphere_pt' )
2959	!
2960	!-- level-of-detail 1 - read initialization profile
2961	IF ( init_3d%lod_pt == 1 ) THEN
2962	ALLOCATE( init_3d%pt_init(nzb:nzt+1) )
2963
2964	CALL get_variable( id_dynamic, 'init_atmosphere_pt', &
2965	init_3d%pt_init(nzb+1:nzt) )
2966	!
2967	!-- Set Neumann top and surface boundary condition for initial
2968	!-- profil
2969	init_3d%pt_init(nzb) = init_3d%pt_init(nzb+1)
2970	init_3d%pt_init(nzt+1) = init_3d%pt_init(nzt)
2971	!
2972	!-- level-of-detail 2 - read 3D initialization data
2973	ELSEIF ( init_3d%lod_pt == 2 ) THEN
2974
2975	CALL get_variable( id_dynamic, 'init_atmosphere_pt', &
2976	pt(nzb+1:nzt,nys:nyn,nxl:nxr), &
2977	nxl+1, nys+1, nzb+1, &
2978	nxr-nxl+1, nyn-nys+1, init_3d%nzu, &
2979	dynamic_3d )
2980
2981	!
2982	!-- Set bottom and top-boundary
2983	pt(nzb,:,:) = pt(nzb+1,:,:)
2984	pt(nzt+1,:,:) = pt(nzt,:,:)
2985
2986	ENDIF
2987	init_3d%from_file_pt = .TRUE.
2988	ELSE
2989	message_string = 'Missing initial data for ' // &
2990	'potential temperature'
2991	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
2992	ENDIF
2993	ENDIF
2994	!
2995	!-- Read mixing ratio
2996	IF ( humidity ) THEN
2997	IF ( check_existence( var_names, 'init_atmosphere_qv' ) ) THEN
2998	!
2999	!-- Read attributes for the fill value and level-of-detail
3000	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_q, &
3001	.FALSE., 'init_atmosphere_qv' )
3002	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_q, &
3003	.FALSE., 'init_atmosphere_qv' )
3004	!
3005	!-- level-of-detail 1 - read initialization profile
3006	IF ( init_3d%lod_q == 1 ) THEN
3007	ALLOCATE( init_3d%q_init(nzb:nzt+1) )
3008
3009	CALL get_variable( id_dynamic, 'init_atmosphere_qv', &
3010	init_3d%q_init(nzb+1:nzt) )
3011	!
3012	!-- Set bottom and top boundary condition (Neumann)
3013	init_3d%q_init(nzb) = init_3d%q_init(nzb+1)
3014	init_3d%q_init(nzt+1) = init_3d%q_init(nzt)
3015	!
3016	!-- level-of-detail 2 - read 3D initialization data
3017	ELSEIF ( init_3d%lod_q == 2 ) THEN
3018
3019	CALL get_variable( id_dynamic, 'init_atmosphere_qv', &
3020	q(nzb+1:nzt,nys:nyn,nxl:nxr), &
3021	nxl+1, nys+1, nzb+1, &
3022	nxr-nxl+1, nyn-nys+1, init_3d%nzu, &
3023	dynamic_3d )
3024
3025	!
3026	!-- Set bottom and top-boundary
3027	q(nzb,:,:) = q(nzb+1,:,:)
3028	q(nzt+1,:,:) = q(nzt,:,:)
3029
3030	ENDIF
3031	init_3d%from_file_q = .TRUE.
3032	ELSE
3033	message_string = 'Missing initial data for ' // &
3034	'mixing ratio'
3035	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3036	ENDIF
3037	ENDIF
3038	!
3039	!-- Close input file
3040	CALL close_input_file( id_dynamic )
3041	#endif
3042	!
3043	!-- End of CPU measurement
3044	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'stop' )
3045	!
3046	!-- Finally, check if the input data has any fill values. Please note,
3047	!-- checks depend on the LOD of the input data.
3048	IF ( init_3d%from_file_u ) THEN
3049	check_passed = .TRUE.
3050	IF ( init_3d%lod_u == 1 ) THEN
3051	IF ( ANY( init_3d%u_init(nzb+1:nzt+1) == init_3d%fill_u ) ) &
3052	check_passed = .FALSE.
3053	ELSEIF ( init_3d%lod_u == 2 ) THEN
3054	IF ( ANY( u(nzb+1:nzt+1,nys:nyn,nxlu:nxr) == init_3d%fill_u ) ) &
3055	check_passed = .FALSE.
3056	ENDIF
3057	IF ( .NOT. check_passed ) THEN
3058	message_string = 'NetCDF input for init_atmosphere_u must ' // &
3059	'not contain any _FillValues'
3060	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3061	ENDIF
3062	ENDIF
3063
3064	IF ( init_3d%from_file_v ) THEN
3065	check_passed = .TRUE.
3066	IF ( init_3d%lod_v == 1 ) THEN
3067	IF ( ANY( init_3d%v_init(nzb+1:nzt+1) == init_3d%fill_v ) ) &
3068	check_passed = .FALSE.
3069	ELSEIF ( init_3d%lod_v == 2 ) THEN
3070	IF ( ANY( v(nzb+1:nzt+1,nysv:nyn,nxl:nxr) == init_3d%fill_v ) ) &
3071	check_passed = .FALSE.
3072	ENDIF
3073	IF ( .NOT. check_passed ) THEN
3074	message_string = 'NetCDF input for init_atmosphere_v must ' // &
3075	'not contain any _FillValues'
3076	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3077	ENDIF
3078	ENDIF
3079
3080	IF ( init_3d%from_file_w ) THEN
3081	check_passed = .TRUE.
3082	IF ( init_3d%lod_w == 1 ) THEN
3083	IF ( ANY( init_3d%w_init(nzb+1:nzt) == init_3d%fill_w ) ) &
3084	check_passed = .FALSE.
3085	ELSEIF ( init_3d%lod_w == 2 ) THEN
3086	IF ( ANY( w(nzb+1:nzt,nys:nyn,nxl:nxr) == init_3d%fill_w ) ) &
3087	check_passed = .FALSE.
3088	ENDIF
3089	IF ( .NOT. check_passed ) THEN
3090	message_string = 'NetCDF input for init_atmosphere_w must ' // &
3091	'not contain any _FillValues'
3092	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3093	ENDIF
3094	ENDIF
3095
3096	IF ( init_3d%from_file_pt ) THEN
3097	check_passed = .TRUE.
3098	IF ( init_3d%lod_pt == 1 ) THEN
3099	IF ( ANY( init_3d%pt_init(nzb+1:nzt+1) == init_3d%fill_pt ) ) &
3100	check_passed = .FALSE.
3101	ELSEIF ( init_3d%lod_pt == 2 ) THEN
3102	IF ( ANY( pt(nzb+1:nzt+1,nys:nyn,nxl:nxr) == init_3d%fill_pt ) ) &
3103	check_passed = .FALSE.
3104	ENDIF
3105	IF ( .NOT. check_passed ) THEN
3106	message_string = 'NetCDF input for init_atmosphere_pt must ' // &
3107	'not contain any _FillValues'
3108	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3109	ENDIF
3110	ENDIF
3111
3112	IF ( init_3d%from_file_q ) THEN
3113	check_passed = .TRUE.
3114	IF ( init_3d%lod_q == 1 ) THEN
3115	IF ( ANY( init_3d%q_init(nzb+1:nzt+1) == init_3d%fill_q ) ) &
3116	check_passed = .FALSE.
3117	ELSEIF ( init_3d%lod_q == 2 ) THEN
3118	IF ( ANY( q(nzb+1:nzt+1,nys:nyn,nxl:nxr) == init_3d%fill_q ) ) &
3119	check_passed = .FALSE.
3120	ENDIF
3121	IF ( .NOT. check_passed ) THEN
3122	message_string = 'NetCDF input for init_atmosphere_q must ' // &
3123	'not contain any _FillValues'
3124	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3125	ENDIF
3126	ENDIF
3127	!
3128	!-- Workaround for cyclic conditions. Please see above for further explanation.
3129	IF ( bc_lr_cyc .AND. nxl == 0 ) nxlu = nxl
3130	IF ( bc_ns_cyc .AND. nys == 0 ) nysv = nys
3131
3132	END SUBROUTINE netcdf_data_input_init_3d
3133
3134	!------------------------------------------------------------------------------!
3135	! Description:
3136	! ------------
3137	!> Reads initialization data of u, v, w, pt, q, geostrophic wind components,
3138	!> as well as soil moisture and soil temperature, derived from larger-scale
3139	!> model (COSMO) by Inifor.
3140	!------------------------------------------------------------------------------!
3141	SUBROUTINE netcdf_data_input_init_lsm
3142
3143	USE control_parameters, &
3144	ONLY: message_string
3145
3146	USE indices, &
3147	ONLY: nx, nxl, nxr, ny, nyn, nys
3148
3149	IMPLICIT NONE
3150
3151	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< string containing all variables on file
3152
3153	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
3154	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
3155
3156	!
3157	!-- Skip routine if no input file with dynamic input data is available.
3158	IF ( .NOT. input_pids_dynamic ) RETURN
3159	!
3160	!-- CPU measurement
3161	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'start' )
3162
3163	#if defined ( __netcdf )
3164	!
3165	!-- Open file in read-only mode
3166	CALL open_read_file( TRIM( input_file_dynamic ) // &
3167	TRIM( coupling_char ), id_dynamic )
3168
3169	!
3170	!-- At first, inquire all variable names.
3171	CALL inquire_num_variables( id_dynamic, num_vars )
3172	!
3173	!-- Allocate memory to store variable names.
3174	ALLOCATE( var_names(1:num_vars) )
3175	CALL inquire_variable_names( id_dynamic, var_names )
3176	!
3177	!-- Read vertical dimension for soil depth.
3178	IF ( check_existence( var_names, 'zsoil' ) ) &
3179	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzs,&
3180	'zsoil' )
3181	!
3182	!-- Read also the horizontal dimensions required for soil initialization.
3183	!-- Please note, in case of non-nested runs or in case of root domain,
3184	!-- these data is already available, but will be read again for the sake
3185	!-- of clearness.
3186	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nx, &
3187	'x' )
3188	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%ny, &
3189	'y' )
3190	!
3191	!-- Check for correct horizontal and vertical dimension. Please note,
3192	!-- in case of non-nested runs or in case of root domain, these checks
3193	!-- are already performed
3194	IF ( init_3d%nx-1 /= nx .OR. init_3d%ny-1 /= ny ) THEN
3195	message_string = 'Number of inifor horizontal grid points '// &
3196	'does not match the number of numeric grid points.'
3197	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
3198	ENDIF
3199	!
3200	!-- Read vertical dimensions. Later, these are required for eventual
3201	!-- inter- and extrapolations of the initialization data.
3202	IF ( check_existence( var_names, 'zsoil' ) ) THEN
3203	ALLOCATE( init_3d%z_soil(1:init_3d%nzs) )
3204	CALL get_variable( id_dynamic, 'zsoil', init_3d%z_soil )
3205	ENDIF
3206	!
3207	!-- Read initial data for soil moisture
3208	IF ( check_existence( var_names, 'init_soil_m' ) ) THEN
3209	!
3210	!-- Read attributes for the fill value and level-of-detail
3211	CALL get_attribute( id_dynamic, char_fill, &
3212	init_3d%fill_msoil, &
3213	.FALSE., 'init_soil_m' )
3214	CALL get_attribute( id_dynamic, char_lod, &
3215	init_3d%lod_msoil, &
3216	.FALSE., 'init_soil_m' )
3217	!
3218	!-- level-of-detail 1 - read initialization profile
3219	IF ( init_3d%lod_msoil == 1 ) THEN
3220	ALLOCATE( init_3d%msoil_1d(0:init_3d%nzs-1) )
3221
3222	CALL get_variable( id_dynamic, 'init_soil_m', &
3223	init_3d%msoil_1d(0:init_3d%nzs-1) )
3224	!
3225	!-- level-of-detail 2 - read 3D initialization data
3226	ELSEIF ( init_3d%lod_msoil == 2 ) THEN
3227	ALLOCATE ( init_3d%msoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr) )
3228
3229	CALL get_variable( id_dynamic, 'init_soil_m', &
3230	init_3d%msoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr),&
3231	nxl, nxr, nys, nyn, 0, init_3d%nzs-1 )
3232
3233	ENDIF
3234	init_3d%from_file_msoil = .TRUE.
3235	ENDIF
3236	!
3237	!-- Read soil temperature
3238	IF ( check_existence( var_names, 'init_soil_t' ) ) THEN
3239	!
3240	!-- Read attributes for the fill value and level-of-detail
3241	CALL get_attribute( id_dynamic, char_fill, &
3242	init_3d%fill_tsoil, &
3243	.FALSE., 'init_soil_t' )
3244	CALL get_attribute( id_dynamic, char_lod, &
3245	init_3d%lod_tsoil, &
3246	.FALSE., 'init_soil_t' )
3247	!
3248	!-- level-of-detail 1 - read initialization profile
3249	IF ( init_3d%lod_tsoil == 1 ) THEN
3250	ALLOCATE( init_3d%tsoil_1d(0:init_3d%nzs-1) )
3251
3252	CALL get_variable( id_dynamic, 'init_soil_t', &
3253	init_3d%tsoil_1d(0:init_3d%nzs-1) )
3254
3255	!
3256	!-- level-of-detail 2 - read 3D initialization data
3257	ELSEIF ( init_3d%lod_tsoil == 2 ) THEN
3258	ALLOCATE ( init_3d%tsoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr) )
3259
3260	CALL get_variable( id_dynamic, 'init_soil_t', &
3261	init_3d%tsoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr),&
3262	nxl, nxr, nys, nyn, 0, init_3d%nzs-1 )
3263	ENDIF
3264	init_3d%from_file_tsoil = .TRUE.
3265	ENDIF
3266	!
3267	!-- Close input file
3268	CALL close_input_file( id_dynamic )
3269	#endif
3270	!
3271	!-- End of CPU measurement
3272	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'stop' )
3273
3274	END SUBROUTINE netcdf_data_input_init_lsm
3275
3276	!------------------------------------------------------------------------------!
3277	! Description:
3278	! ------------
3279	!> Reads data at lateral and top boundaries derived from larger-scale model
3280	!> (COSMO) by Inifor.
3281	!------------------------------------------------------------------------------!
3282	SUBROUTINE netcdf_data_input_offline_nesting
3283
3284	USE control_parameters, &
3285	ONLY: bc_dirichlet_l, bc_dirichlet_n, bc_dirichlet_r, &
3286	bc_dirichlet_s, humidity, neutral, nesting_offline, &
3287	time_since_reference_point
3288
3289	USE indices, &
3290	ONLY: nxl, nxlu, nxr, nyn, nys, nysv, nzb, nzt
3291
3292	IMPLICIT NONE
3293
3294	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
3295	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
3296	INTEGER(iwp) :: t !< running index time dimension
3297	!
3298	!-- Skip input if no forcing from larger-scale models is applied.
3299	IF ( .NOT. nesting_offline ) RETURN
3300
3301	!
3302	!-- CPU measurement
3303	CALL cpu_log( log_point_s(86), 'NetCDF input forcing', 'start' )
3304
3305	#if defined ( __netcdf )
3306	!
3307	!-- Open file in read-only mode
3308	CALL open_read_file( TRIM( input_file_dynamic ) // &
3309	TRIM( coupling_char ), id_dynamic )
3310	!
3311	!-- Initialize INIFOR forcing.
3312	IF ( .NOT. nest_offl%init ) THEN
3313	!
3314	!-- At first, inquire all variable names.
3315	CALL inquire_num_variables( id_dynamic, num_vars )
3316	!
3317	!-- Allocate memory to store variable names.
3318	ALLOCATE( nest_offl%var_names(1:num_vars) )
3319	CALL inquire_variable_names( id_dynamic, nest_offl%var_names )
3320	!
3321	!-- Read time dimension, allocate memory and finally read time array
3322	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3323	nest_offl%nt, 'time' )
3324
3325	IF ( check_existence( nest_offl%var_names, 'time' ) ) THEN
3326	ALLOCATE( nest_offl%time(0:nest_offl%nt-1) )
3327	CALL get_variable( id_dynamic, 'time', nest_offl%time )
3328	ENDIF
3329	!
3330	!-- Read vertical dimension of scalar und w grid
3331	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3332	nest_offl%nzu, 'z' )
3333	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3334	nest_offl%nzw, 'zw' )
3335
3336	IF ( check_existence( nest_offl%var_names, 'z' ) ) THEN
3337	ALLOCATE( nest_offl%zu_atmos(1:nest_offl%nzu) )
3338	CALL get_variable( id_dynamic, 'z', nest_offl%zu_atmos )
3339	ENDIF
3340	IF ( check_existence( nest_offl%var_names, 'zw' ) ) THEN
3341	ALLOCATE( nest_offl%zw_atmos(1:nest_offl%nzw) )
3342	CALL get_variable( id_dynamic, 'zw', nest_offl%zw_atmos )
3343	ENDIF
3344
3345	!
3346	!-- Read surface pressure
3347	IF ( check_existence( nest_offl%var_names, &
3348	'surface_forcing_surface_pressure' ) ) THEN
3349	ALLOCATE( nest_offl%surface_pressure(0:nest_offl%nt-1) )
3350	CALL get_variable( id_dynamic, &
3351	'surface_forcing_surface_pressure', &
3352	nest_offl%surface_pressure )
3353	ENDIF
3354	!
3355	!-- Set control flag to indicate that initialization is already done
3356	nest_offl%init = .TRUE.
3357
3358	ENDIF
3359
3360	!
3361	!-- Obtain time index for current input starting at 0.
3362	!-- @todo: At the moment INIFOR and simulated time correspond
3363	!-- to each other. If required, adjust to daytime.
3364	nest_offl%tind = MINLOC( ABS( nest_offl%time - &
3365	time_since_reference_point ), DIM = 1 ) &
3366	- 1
3367	nest_offl%tind_p = nest_offl%tind + 1
3368	!
3369	!-- Read geostrophic wind components
3370	DO t = nest_offl%tind, nest_offl%tind_p
3371	CALL get_variable_pr( id_dynamic, 'ls_forcing_ug', t+1, &
3372	nest_offl%ug(t-nest_offl%tind,nzb+1:nzt) )
3373	CALL get_variable_pr( id_dynamic, 'ls_forcing_vg', t+1, &
3374	nest_offl%vg(t-nest_offl%tind,nzb+1:nzt) )
3375	ENDDO
3376	!
3377	!-- Read data at lateral and top boundaries. Please note, at left and
3378	!-- right domain boundary, yz-layers are read for u, v, w, pt and q.
3379	!-- For the v-component, the data starts at nysv, while for the other
3380	!-- quantities the data starts at nys. This is equivalent at the north
3381	!-- and south domain boundary for the u-component.
3382	!-- Further, lateral data is not accessed by parallel IO, indicated by the
3383	!-- last passed flag in the subroutine get_variable(). This is because
3384	!-- not every PE participates in this collective blocking read operation.
3385	IF ( bc_dirichlet_l ) THEN
3386	CALL get_variable( id_dynamic, 'ls_forcing_left_u', &
3387	nest_offl%u_left(0:1,nzb+1:nzt,nys:nyn), &
3388	nys+1, nzb+1, nest_offl%tind+1, &
3389	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3390
3391	CALL get_variable( id_dynamic, 'ls_forcing_left_v', &
3392	nest_offl%v_left(0:1,nzb+1:nzt,nysv:nyn), &
3393	nysv, nzb+1, nest_offl%tind+1, &
3394	nyn-nysv+1, nest_offl%nzu, 2, .FALSE. )
3395
3396	CALL get_variable( id_dynamic, 'ls_forcing_left_w', &
3397	nest_offl%w_left(0:1,nzb+1:nzt-1,nys:nyn), &
3398	nys+1, nzb+1, nest_offl%tind+1, &
3399	nyn-nys+1, nest_offl%nzw, 2, .FALSE. )
3400
3401	IF ( .NOT. neutral ) THEN
3402	CALL get_variable( id_dynamic, 'ls_forcing_left_pt', &
3403	nest_offl%pt_left(0:1,nzb+1:nzt,nys:nyn), &
3404	nys+1, nzb+1, nest_offl%tind+1, &
3405	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3406	ENDIF
3407
3408	IF ( humidity ) THEN
3409	CALL get_variable( id_dynamic, 'ls_forcing_left_qv', &
3410	nest_offl%q_left(0:1,nzb+1:nzt,nys:nyn), &
3411	nys+1, nzb+1, nest_offl%tind+1, &
3412	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3413	ENDIF
3414
3415	ENDIF
3416
3417	IF ( bc_dirichlet_r ) THEN
3418	CALL get_variable( id_dynamic, 'ls_forcing_right_u', &
3419	nest_offl%u_right(0:1,nzb+1:nzt,nys:nyn), &
3420	nys+1, nzb+1, nest_offl%tind+1, &
3421	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3422
3423	CALL get_variable( id_dynamic, 'ls_forcing_right_v', &
3424	nest_offl%v_right(0:1,nzb+1:nzt,nysv:nyn), &
3425	nysv, nzb+1, nest_offl%tind+1, &
3426	nyn-nysv+1, nest_offl%nzu, 2, .FALSE. )
3427
3428	CALL get_variable( id_dynamic, 'ls_forcing_right_w', &
3429	nest_offl%w_right(0:1,nzb+1:nzt-1,nys:nyn), &
3430	nys+1, nzb+1, nest_offl%tind+1, &
3431	nyn-nys+1, nest_offl%nzw, 2, .FALSE. )
3432
3433	IF ( .NOT. neutral ) THEN
3434	CALL get_variable( id_dynamic, 'ls_forcing_right_pt', &
3435	nest_offl%pt_right(0:1,nzb+1:nzt,nys:nyn), &
3436	nys+1, nzb+1, nest_offl%tind+1, &
3437	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3438	ENDIF
3439	IF ( humidity ) THEN
3440	CALL get_variable( id_dynamic, 'ls_forcing_right_qv', &
3441	nest_offl%q_right(0:1,nzb+1:nzt,nys:nyn), &
3442	nys+1, nzb+1, nest_offl%tind+1, &
3443	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3444	ENDIF
3445	ENDIF
3446
3447	IF ( bc_dirichlet_n ) THEN
3448
3449	CALL get_variable( id_dynamic, 'ls_forcing_north_u', &
3450	nest_offl%u_north(0:1,nzb+1:nzt,nxlu:nxr), &
3451	nxlu, nzb+1, nest_offl%tind+1, &
3452	nxr-nxlu+1, nest_offl%nzu, 2, .FALSE. )
3453
3454	CALL get_variable( id_dynamic, 'ls_forcing_north_v', &
3455	nest_offl%v_north(0:1,nzb+1:nzt,nxl:nxr), &
3456	nxl+1, nzb+1, nest_offl%tind+1, &
3457	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3458
3459	CALL get_variable( id_dynamic, 'ls_forcing_north_w', &
3460	nest_offl%w_north(0:1,nzb+1:nzt-1,nxl:nxr), &
3461	nxl+1, nzb+1, nest_offl%tind+1, &
3462	nxr-nxl+1, nest_offl%nzw, 2, .FALSE. )
3463
3464	IF ( .NOT. neutral ) THEN
3465	CALL get_variable( id_dynamic, 'ls_forcing_north_pt', &
3466	nest_offl%pt_north(0:1,nzb+1:nzt,nxl:nxr), &
3467	nxl+1, nzb+1, nest_offl%tind+1, &
3468	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3469	ENDIF
3470	IF ( humidity ) THEN
3471	CALL get_variable( id_dynamic, 'ls_forcing_north_qv', &
3472	nest_offl%q_north(0:1,nzb+1:nzt,nxl:nxr), &
3473	nxl+1, nzb+1, nest_offl%tind+1, &
3474	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3475	ENDIF
3476	ENDIF
3477
3478	IF ( bc_dirichlet_s ) THEN
3479	CALL get_variable( id_dynamic, 'ls_forcing_south_u', &
3480	nest_offl%u_south(0:1,nzb+1:nzt,nxlu:nxr), &
3481	nxlu, nzb+1, nest_offl%tind+1, &
3482	nxr-nxlu+1, nest_offl%nzu, 2, .FALSE. )
3483
3484	CALL get_variable( id_dynamic, 'ls_forcing_south_v', &
3485	nest_offl%v_south(0:1,nzb+1:nzt,nxl:nxr), &
3486	nxl+1, nzb+1, nest_offl%tind+1, &
3487	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3488
3489	CALL get_variable( id_dynamic, 'ls_forcing_south_w', &
3490	nest_offl%w_south(0:1,nzb+1:nzt-1,nxl:nxr), &
3491	nxl+1, nzb+1, nest_offl%tind+1, &
3492	nxr-nxl+1, nest_offl%nzw, 2, .FALSE. )
3493
3494	IF ( .NOT. neutral ) THEN
3495	CALL get_variable( id_dynamic, 'ls_forcing_south_pt', &
3496	nest_offl%pt_south(0:1,nzb+1:nzt,nxl:nxr), &
3497	nxl+1, nzb+1, nest_offl%tind+1, &
3498	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3499	ENDIF
3500	IF ( humidity ) THEN
3501	CALL get_variable( id_dynamic, 'ls_forcing_south_qv', &
3502	nest_offl%q_south(0:1,nzb+1:nzt,nxl:nxr), &
3503	nxl+1, nzb+1, nest_offl%tind+1, &
3504	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3505	ENDIF
3506	ENDIF
3507
3508	!
3509	!-- Top boundary
3510	CALL get_variable( id_dynamic, 'ls_forcing_top_u', &
3511	nest_offl%u_top(0:1,nys:nyn,nxlu:nxr), &
3512	nxlu, nys+1, nest_offl%tind+1, &
3513	nxr-nxlu+1, nyn-nys+1, 2, .TRUE. )
3514
3515	CALL get_variable( id_dynamic, 'ls_forcing_top_v', &
3516	nest_offl%v_top(0:1,nysv:nyn,nxl:nxr), &
3517	nxl+1, nysv, nest_offl%tind+1, &
3518	nxr-nxl+1, nyn-nysv+1, 2, .TRUE. )
3519
3520	CALL get_variable( id_dynamic, 'ls_forcing_top_w', &
3521	nest_offl%w_top(0:1,nys:nyn,nxl:nxr), &
3522	nxl+1, nys+1, nest_offl%tind+1, &
3523	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3524
3525	IF ( .NOT. neutral ) THEN
3526	CALL get_variable( id_dynamic, 'ls_forcing_top_pt', &
3527	nest_offl%pt_top(0:1,nys:nyn,nxl:nxr), &
3528	nxl+1, nys+1, nest_offl%tind+1, &
3529	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3530	ENDIF
3531	IF ( humidity ) THEN
3532	CALL get_variable( id_dynamic, 'ls_forcing_top_qv', &
3533	nest_offl%q_top(0:1,nys:nyn,nxl:nxr), &
3534	nxl+1, nys+1, nest_offl%tind+1, &
3535	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3536	ENDIF
3537
3538	!
3539	!-- Close input file
3540	CALL close_input_file( id_dynamic )
3541	#endif
3542	!
3543	!-- End of CPU measurement
3544	CALL cpu_log( log_point_s(86), 'NetCDF input forcing', 'stop' )
3545
3546	END SUBROUTINE netcdf_data_input_offline_nesting
3547
3548
3549	!------------------------------------------------------------------------------!
3550	! Description:
3551	! ------------
3552	!> Checks input file for consistency and minimum requirements.
3553	!------------------------------------------------------------------------------!
3554	SUBROUTINE netcdf_data_input_check_dynamic
3555
3556	USE control_parameters, &
3557	ONLY: initializing_actions, message_string, nesting_offline
3558
3559	IMPLICIT NONE
3560
3561	!
3562	!-- In case of forcing, check whether dynamic input file is present
3563	IF ( .NOT. input_pids_dynamic .AND. nesting_offline ) THEN
3564	message_string = 'nesting_offline = .TRUE. requires dynamic ' // &
3565	'input file ' // &
3566	TRIM( input_file_dynamic ) // TRIM( coupling_char )
3567	CALL message( 'netcdf_data_input_mod', 'PA0546', 1, 2, 0, 6, 0 )
3568	ENDIF
3569	!
3570	!-- Dynamic input file must also be present if initialization via inifor is
3571	!-- prescribed.
3572	IF ( .NOT. input_pids_dynamic .AND. &
3573	TRIM( initializing_actions ) == 'inifor' ) THEN
3574	message_string = 'initializing_actions = inifor requires dynamic ' //&
3575	'input file ' // TRIM( input_file_dynamic ) // &
3576	TRIM( coupling_char )
3577	CALL message( 'netcdf_data_input_mod', 'PA0547', 1, 2, 0, 6, 0 )
3578	ENDIF
3579
3580	END SUBROUTINE netcdf_data_input_check_dynamic
3581
3582	!------------------------------------------------------------------------------!
3583	! Description:
3584	! ------------
3585	!> Checks input file for consistency and minimum requirements.
3586	!------------------------------------------------------------------------------!
3587	SUBROUTINE netcdf_data_input_check_static
3588
3589	USE arrays_3d, &
3590	ONLY: zu
3591
3592	USE control_parameters, &
3593	ONLY: land_surface, message_string, urban_surface
3594
3595	USE grid_variables, &
3596	ONLY: dx, dy
3597
3598	USE indices, &
3599	ONLY: nx, nxl, nxr, ny, nyn, nys
3600
3601	IMPLICIT NONE
3602
3603	INTEGER(iwp) :: i !< loop index along x-direction
3604	INTEGER(iwp) :: j !< loop index along y-direction
3605	INTEGER(iwp) :: n_surf !< number of different surface types at given location
3606
3607	LOGICAL :: check_passed !< flag indicating if a check passed
3608
3609	!
3610	!-- Return if no static input file is available
3611	IF ( .NOT. input_pids_static ) RETURN
3612	!
3613	!-- Check whether dimension size in input file matches the model dimensions
3614	IF ( dim_static%nx-1 /= nx .OR. dim_static%ny-1 /= ny ) THEN
3615	message_string = 'Static input file: horizontal dimension in ' // &
3616	'x- and/or y-direction ' // &
3617	'do not match the respective model dimension'
3618	CALL message( 'netcdf_data_input_mod', 'PA0548', 1, 2, 0, 6, 0 )
3619	ENDIF
3620	!
3621	!-- Check if grid spacing of provided input data matches the respective
3622	!-- grid spacing in the model.
3623	IF ( ABS( dim_static%x(1) - dim_static%x(0) - dx ) > 10E-6_wp .OR. &
3624	ABS( dim_static%y(1) - dim_static%y(0) - dy ) > 10E-6_wp ) THEN
3625	message_string = 'Static input file: horizontal grid spacing ' // &
3626	'in x- and/or y-direction ' // &
3627	'do not match the respective model grid spacing.'
3628	CALL message( 'netcdf_data_input_mod', 'PA0549', 1, 2, 0, 6, 0 )
3629	ENDIF
3630	!
3631	!-- Check for correct dimension of surface_fractions, should run from 0-2.
3632	IF ( surface_fraction_f%from_file ) THEN
3633	IF ( surface_fraction_f%nf-1 > 2 ) THEN
3634	message_string = 'nsurface_fraction must not be larger than 3.'
3635	CALL message( 'netcdf_data_input_mod', 'PA0580', 1, 2, 0, 6, 0 )
3636	ENDIF
3637	ENDIF
3638	!
3639	!-- Check orography for fill-values. For the moment, give an error message.
3640	!-- More advanced methods, e.g. a nearest neighbor algorithm as used in GIS
3641	!-- systems might be implemented later.
3642	!-- Please note, if no terrain height is provided, it is set to 0.
3643	IF ( ANY( terrain_height_f%var == terrain_height_f%fill ) ) THEN
3644	message_string = 'NetCDF variable zt is not ' // &
3645	'allowed to have missing data'
3646	CALL message( 'netcdf_data_input_mod', 'PA0550', 2, 2, myid, 6, 0 )
3647	ENDIF
3648	!
3649	!-- Check for negative terrain heights
3650	IF ( ANY( terrain_height_f%var < 0.0_wp ) ) THEN
3651	message_string = 'NetCDF variable zt is not ' // &
3652	'allowed to have negative values'
3653	CALL message( 'netcdf_data_input_mod', 'PA0551', 2, 2, myid, 6, 0 )
3654	ENDIF
3655	!
3656	!-- If 3D buildings are read, check if building information is consistent
3657	!-- to numeric grid.
3658	IF ( buildings_f%from_file ) THEN
3659	IF ( buildings_f%lod == 2 ) THEN
3660	IF ( buildings_f%nz > SIZE( zu ) ) THEN
3661	message_string = 'Reading 3D building data - too much ' // &
3662	'data points along the vertical coordinate.'
3663	CALL message( 'netcdf_data_input_mod', 'PA0552', 2, 2, 0, 6, 0 )
3664	ENDIF
3665
3666	IF ( ANY( ABS( buildings_f%z(0:buildings_f%nz-1) - &
3667	zu(0:buildings_f%nz-1) ) > 1E-6_wp ) ) THEN
3668	message_string = 'Reading 3D building data - vertical ' // &
3669	'coordinate do not match numeric grid.'
3670	CALL message( 'netcdf_data_input_mod', 'PA0553', 2, 2, myid, 6, 0 )
3671	ENDIF
3672	ENDIF
3673	ENDIF
3674
3675	!
3676	!-- Skip further checks concerning buildings and natural surface properties
3677	!-- if no urban surface and land surface model are applied.
3678	IF ( .NOT. land_surface .AND. .NOT. urban_surface ) RETURN
3679	!
3680	!-- Check for minimum requirement of surface-classification data in case
3681	!-- static input file is used.
3682	IF ( ( .NOT. vegetation_type_f%from_file .OR. &
3683	.NOT. pavement_type_f%from_file .OR. &
3684	.NOT. water_type_f%from_file .OR. &
3685	.NOT. soil_type_f%from_file ) .OR. &
3686	( urban_surface .AND. .NOT. building_type_f%from_file ) ) THEN
3687	message_string = 'Minimum requirement for surface classification ' //&
3688	'is not fulfilled. At least ' // &
3689	'vegetation_type, pavement_type, ' // &
3690	'soil_type and water_type are '// &
3691	'required. If urban-surface model is applied, ' // &
3692	'also building_type ist required'
3693	CALL message( 'netcdf_data_input_mod', 'PA0554', 1, 2, 0, 6, 0 )
3694	ENDIF
3695	!
3696	!-- Check for general availability of input variables.
3697	!-- If vegetation_type is 0 at any location, vegetation_pars as well as
3698	!-- root_area_dens_s are required.
3699	IF ( vegetation_type_f%from_file ) THEN
3700	IF ( ANY( vegetation_type_f%var == 0 ) ) THEN
3701	IF ( .NOT. vegetation_pars_f%from_file ) THEN
3702	message_string = 'If vegetation_type = 0 at any location, ' // &
3703	'vegetation_pars is required'
3704	CALL message( 'netcdf_data_input_mod', 'PA0555', 2, 2, -1, 6, 0 )
3705	ENDIF
3706	IF ( .NOT. root_area_density_lsm_f%from_file ) THEN
3707	message_string = 'If vegetation_type = 0 at any location, ' // &
3708	'root_area_dens_s is required'
3709	CALL message( 'netcdf_data_input_mod', 'PA0556', 2, 2, myid, 6, 0 )
3710	ENDIF
3711	ENDIF
3712	ENDIF
3713	!
3714	!-- If soil_type is zero at any location, soil_pars is required.
3715	IF ( soil_type_f%from_file ) THEN
3716	check_passed = .TRUE.
3717	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
3718	IF ( ANY( soil_type_f%var_2d == 0 ) ) THEN
3719	IF ( .NOT. soil_pars_f%from_file ) check_passed = .FALSE.
3720	ENDIF
3721	ELSE
3722	IF ( ANY( soil_type_f%var_3d == 0 ) ) THEN
3723	IF ( .NOT. soil_pars_f%from_file ) check_passed = .FALSE.
3724	ENDIF
3725	ENDIF
3726	IF ( .NOT. check_passed ) THEN
3727	message_string = 'If soil_type = 0 at any location, ' // &
3728	'soil_pars is required'
3729	CALL message( 'netcdf_data_input_mod', 'PA0557', 2, 2, myid, 6, 0 )
3730	ENDIF
3731	ENDIF
3732	!
3733	!-- Buildings require a type in case of urban-surface model.
3734	IF ( buildings_f%from_file .AND. .NOT. building_type_f%from_file ) THEN
3735	message_string = 'If buildings are provided, also building_type ' // &
3736	'is required'
3737	CALL message( 'netcdf_data_input_mod', 'PA0581', 2, 2, myid, 6, 0 )
3738	ENDIF
3739	!
3740	!-- Buildings require an ID.
3741	IF ( buildings_f%from_file .AND. .NOT. building_id_f%from_file ) THEN
3742	message_string = 'If buildings are provided, also building_id ' // &
3743	'is required'
3744	CALL message( 'netcdf_data_input_mod', 'PA0582', 2, 2, myid, 6, 0 )
3745	ENDIF
3746	!
3747	!-- If building_type is zero at any location, building_pars is required.
3748	IF ( building_type_f%from_file ) THEN
3749	IF ( ANY( building_type_f%var == 0 ) ) THEN
3750	IF ( .NOT. building_pars_f%from_file ) THEN
3751	message_string = 'If building_type = 0 at any location, ' // &
3752	'building_pars is required'
3753	CALL message( 'netcdf_data_input_mod', 'PA0558', 2, 2, myid, 6, 0 )
3754	ENDIF
3755	ENDIF
3756	ENDIF
3757	!
3758	!-- If building_type is provided, also building_id is needed (due to the
3759	!-- filtering algorithm).
3760	IF ( building_type_f%from_file .AND. .NOT. building_id_f%from_file ) &
3761	THEN
3762	message_string = 'If building_type is provided, also building_id '// &
3763	'is required'
3764	CALL message( 'netcdf_data_input_mod', 'PA0519', 2, 2, myid, 6, 0 )
3765	ENDIF
3766	!
3767	!-- If albedo_type is zero at any location, albedo_pars is required.
3768	IF ( albedo_type_f%from_file ) THEN
3769	IF ( ANY( albedo_type_f%var == 0 ) ) THEN
3770	IF ( .NOT. albedo_pars_f%from_file ) THEN
3771	message_string = 'If albedo_type = 0 at any location, ' // &
3772	'albedo_pars is required'
3773	CALL message( 'netcdf_data_input_mod', 'PA0559', 2, 2, myid, 6, 0 )
3774	ENDIF
3775	ENDIF
3776	ENDIF
3777	!
3778	!-- If pavement_type is zero at any location, pavement_pars is required.
3779	IF ( pavement_type_f%from_file ) THEN
3780	IF ( ANY( pavement_type_f%var == 0 ) ) THEN
3781	IF ( .NOT. pavement_pars_f%from_file ) THEN
3782	message_string = 'If pavement_type = 0 at any location, ' // &
3783	'pavement_pars is required'
3784	CALL message( 'netcdf_data_input_mod', 'PA0560', 2, 2, myid, 6, 0 )
3785	ENDIF
3786	ENDIF
3787	ENDIF
3788	!
3789	!-- If pavement_type is zero at any location, also pavement_subsurface_pars
3790	!-- is required.
3791	IF ( pavement_type_f%from_file ) THEN
3792	IF ( ANY( pavement_type_f%var == 0 ) ) THEN
3793	IF ( .NOT. pavement_subsurface_pars_f%from_file ) THEN
3794	message_string = 'If pavement_type = 0 at any location, ' // &
3795	'pavement_subsurface_pars is required'
3796	CALL message( 'netcdf_data_input_mod', 'PA0561', 2, 2, myid, 6, 0 )
3797	ENDIF
3798	ENDIF
3799	ENDIF
3800	!
3801	!-- If water_type is zero at any location, water_pars is required.
3802	IF ( water_type_f%from_file ) THEN
3803	IF ( ANY( water_type_f%var == 0 ) ) THEN
3804	IF ( .NOT. water_pars_f%from_file ) THEN
3805	message_string = 'If water_type = 0 at any location, ' // &
3806	'water_pars is required'
3807	CALL message( 'netcdf_data_input_mod', 'PA0562', 2, 2,myid, 6, 0 )
3808	ENDIF
3809	ENDIF
3810	ENDIF
3811	!
3812	!-- Check for local consistency of the input data.
3813	DO i = nxl, nxr
3814	DO j = nys, nyn
3815	!
3816	!-- For each (y,x)-location at least one of the parameters
3817	!-- vegetation_type, pavement_type, building_type, or water_type
3818	!-- must be set to a nonÂmissing value.
3819	IF ( vegetation_type_f%var(j,i) == vegetation_type_f%fill .AND. &
3820	pavement_type_f%var(j,i) == pavement_type_f%fill .AND. &
3821	building_type_f%var(j,i) == building_type_f%fill .AND. &
3822	water_type_f%var(j,i) == water_type_f%fill ) THEN
3823	WRITE( message_string, * ) 'At least one of the parameters '// &
3824	'vegetation_type, pavement_type, ' // &
3825	'building_type, or water_type must be set '// &
3826	'to a non-missing value. Grid point: ', j, i
3827	CALL message( 'netcdf_data_input_mod', 'PA0563', 2, 2, myid, 6, 0 )
3828	ENDIF
3829	!
3830	!-- Note that a soil_type is required for each location (y,x) where
3831	!-- either vegetation_type or pavement_type is a nonÂmissing value.
3832	IF ( ( vegetation_type_f%var(j,i) /= vegetation_type_f%fill .OR. &
3833	pavement_type_f%var(j,i) /= pavement_type_f%fill ) ) THEN
3834	check_passed = .TRUE.
3835	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
3836	IF ( soil_type_f%var_2d(j,i) == soil_type_f%fill ) &
3837	check_passed = .FALSE.
3838	ELSE
3839	IF ( ANY( soil_type_f%var_3d(:,j,i) == soil_type_f%fill) ) &
3840	check_passed = .FALSE.
3841	ENDIF
3842
3843	IF ( .NOT. check_passed ) THEN
3844	message_string = 'soil_type is required for each '// &
3845	'location (y,x) where vegetation_type or ' // &
3846	'pavement_type is a non-missing value.'
3847	CALL message( 'netcdf_data_input_mod', 'PA0564', &
3848	2, 2, myid, 6, 0 )
3849	ENDIF
3850	ENDIF
3851	!
3852	!-- Check for consistency of surface fraction. If more than one type
3853	!-- is set, surface fraction need to be given and the sum must not
3854	!-- be larger than 1.
3855	n_surf = 0
3856	IF ( vegetation_type_f%var(j,i) /= vegetation_type_f%fill ) &
3857	n_surf = n_surf + 1
3858	IF ( water_type_f%var(j,i) /= water_type_f%fill ) &
3859	n_surf = n_surf + 1
3860	IF ( pavement_type_f%var(j,i) /= pavement_type_f%fill ) &
3861	n_surf = n_surf + 1
3862
3863	IF ( n_surf > 1 ) THEN
3864	IF ( .NOT. surface_fraction_f%from_file ) THEN
3865	message_string = 'If more than one surface type is ' // &
3866	'given at a location, surface_fraction ' // &
3867	'must be provided.'
3868	CALL message( 'netcdf_data_input_mod', 'PA0565', &
3869	2, 2, myid, 6, 0 )
3870	ELSEIF ( ANY ( surface_fraction_f%frac(:,j,i) == &
3871	surface_fraction_f%fill ) ) THEN
3872	message_string = 'If more than one surface type is ' // &
3873	'given at a location, surface_fraction ' // &
3874	'must be provided.'
3875	CALL message( 'netcdf_data_input_mod', 'PA0565', &
3876	2, 2, myid, 6, 0 )
3877	ENDIF
3878	ENDIF
3879	!
3880	!-- Check for further mismatches. e.g. relative fractions exceed 1 or
3881	!-- vegetation_type is set but surface vegetation fraction is zero,
3882	!-- etc..
3883	IF ( surface_fraction_f%from_file ) THEN
3884	!
3885	!-- Sum of relative fractions must not exceed 1.
3886	IF ( SUM ( surface_fraction_f%frac(0:2,j,i) ) > 1.0_wp ) THEN
3887	message_string = 'surface_fraction must not exceed 1'
3888	CALL message( 'netcdf_data_input_mod', 'PA0566', &
3889	2, 2, myid, 6, 0 )
3890	ENDIF
3891	!
3892	!-- Relative fraction for a type must not be zero at locations where
3893	!-- this type is set.
3894	IF ( &
3895	( vegetation_type_f%var(j,i) /= vegetation_type_f%fill .AND.&
3896	( surface_fraction_f%frac(ind_veg_wall,j,i) == 0.0_wp .OR. &
3897	surface_fraction_f%frac(ind_veg_wall,j,i) == &
3898	surface_fraction_f%fill ) &
3899	) .OR. &
3900	( pavement_type_f%var(j,i) /= pavement_type_f%fill .AND. &
3901	( surface_fraction_f%frac(ind_pav_green,j,i) == 0.0_wp .OR. &
3902	surface_fraction_f%frac(ind_pav_green,j,i) == &
3903	surface_fraction_f%fill ) &
3904	) .OR. &
3905	( water_type_f%var(j,i) /= water_type_f%fill .AND. &
3906	( surface_fraction_f%frac(ind_wat_win,j,i) == 0.0_wp .OR. &
3907	surface_fraction_f%frac(ind_wat_win,j,i) == &
3908	surface_fraction_f%fill ) &
3909	) ) THEN
3910	WRITE( message_string, * ) 'Mismatch in setting of ' // &
3911	'surface_fraction. Vegetation-, pavement-, or '// &
3912	'water surface is given at (i,j) = ( ', i, j, &
3913	' ), but surface fraction is 0 for the given type.'
3914	CALL message( 'netcdf_data_input_mod', 'PA0567', &
3915	2, 2, myid, 6, 0 )
3916	ENDIF
3917	!
3918	!-- Relative fraction for a type must not contain non-zero values
3919	!-- if this type is not set.
3920	IF ( &
3921	( vegetation_type_f%var(j,i) == vegetation_type_f%fill .AND.&
3922	( surface_fraction_f%frac(ind_veg_wall,j,i) /= 0.0_wp .AND. &
3923	surface_fraction_f%frac(ind_veg_wall,j,i) /= &
3924	surface_fraction_f%fill ) &
3925	) .OR. &
3926	( pavement_type_f%var(j,i) == pavement_type_f%fill .AND. &
3927	( surface_fraction_f%frac(ind_pav_green,j,i) /= 0.0_wp .AND. &
3928	surface_fraction_f%frac(ind_pav_green,j,i) /= &
3929	surface_fraction_f%fill ) &
3930	) .OR. &
3931	( water_type_f%var(j,i) == water_type_f%fill .AND. &
3932	( surface_fraction_f%frac(ind_wat_win,j,i) /= 0.0_wp .AND. &
3933	surface_fraction_f%frac(ind_wat_win,j,i) /= &
3934	surface_fraction_f%fill ) &
3935	) ) THEN
3936	WRITE( message_string, * ) 'Mismatch in setting of ' // &
3937	'surface_fraction. Vegetation-, pavement-, or '// &
3938	'water surface is not given at (i,j) = ( ', i, j, &
3939	' ), but surface fraction is not 0 for the ' // &
3940	'given type.'
3941	CALL message( 'netcdf_data_input_mod', 'PA0568', &
3942	2, 2, myid, 6, 0 )
3943	ENDIF
3944	ENDIF
3945	!
3946	!-- Check vegetation_pars. If vegetation_type is 0, all parameters
3947	!-- need to be set, otherwise, single parameters set by
3948	!-- vegetation_type can be overwritten.
3949	IF ( vegetation_type_f%from_file ) THEN
3950	IF ( vegetation_type_f%var(j,i) == 0 ) THEN
3951	IF ( ANY( vegetation_pars_f%pars_xy(:,j,i) == &
3952	vegetation_pars_f%fill ) ) THEN
3953	message_string = 'If vegetation_type(y,x) = 0, all ' // &
3954	'parameters of vegetation_pars at '// &
3955	'this location must be set.'
3956	CALL message( 'netcdf_data_input_mod', 'PA0569', &
3957	2, 2, myid, 6, 0 )
3958	ENDIF
3959	ENDIF
3960	ENDIF
3961	!
3962	!-- Check root distribution. If vegetation_type is 0, all levels must
3963	!-- be set.
3964	IF ( vegetation_type_f%from_file ) THEN
3965	IF ( vegetation_type_f%var(j,i) == 0 ) THEN
3966	IF ( ANY( root_area_density_lsm_f%var(:,j,i) == &
3967	root_area_density_lsm_f%fill ) ) THEN
3968	message_string = 'If vegetation_type(y,x) = 0, all ' // &
3969	'levels of root_area_dens_s ' // &
3970	'must be set at this location.'
3971	CALL message( 'netcdf_data_input_mod', 'PA0570', &
3972	2, 2, myid, 6, 0 )
3973	ENDIF
3974	ENDIF
3975	ENDIF
3976	!
3977	!-- Check soil parameters. If soil_type is 0, all parameters
3978	!-- must be set.
3979	IF ( soil_type_f%from_file ) THEN
3980	check_passed = .TRUE.
3981	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
3982	IF ( soil_type_f%var_2d(j,i) == 0 ) THEN
3983	IF ( ANY( soil_pars_f%pars_xy(:,j,i) == &
3984	soil_pars_f%fill ) ) check_passed = .FALSE.
3985	ENDIF
3986	ELSE
3987	IF ( ANY( soil_type_f%var_3d(:,j,i) == 0 ) ) THEN
3988	IF ( ANY( soil_pars_f%pars_xy(:,j,i) == &
3989	soil_pars_f%fill ) ) check_passed = .FALSE.
3990	ENDIF
3991	ENDIF
3992	IF ( .NOT. check_passed ) THEN
3993	message_string = 'If soil_type(y,x) = 0, all levels of ' //&
3994	'soil_pars at this location must be set.'
3995	CALL message( 'netcdf_data_input_mod', 'PA0571', &
3996	2, 2, myid, 6, 0 )
3997	ENDIF
3998	ENDIF
3999
4000	!
4001	!-- Check building parameters. If building_type is 0, all parameters
4002	!-- must be set.
4003	IF ( building_type_f%from_file ) THEN
4004	IF ( building_type_f%var(j,i) == 0 ) THEN
4005	IF ( ANY( building_pars_f%pars_xy(:,j,i) == &
4006	building_pars_f%fill ) ) THEN
4007	message_string = 'If building_type(y,x) = 0, all ' // &
4008	'parameters of building_pars at this '//&
4009	'location must be set.'
4010	CALL message( 'netcdf_data_input_mod', 'PA0572', &
4011	2, 2, myid, 6, 0 )
4012	ENDIF
4013	ENDIF
4014	ENDIF
4015	!
4016	!-- Check if building_type is set at each building and vice versa.
4017	IF ( building_type_f%from_file .AND. buildings_f%from_file ) THEN
4018	IF ( buildings_f%lod == 1 ) THEN
4019	IF ( buildings_f%var_2d(j,i) /= buildings_f%fill1 .AND. &
4020	building_type_f%var(j,i) == building_type_f%fill ) THEN
4021	WRITE( message_string, * ) 'Each location where a ' // &
4022	'building is set requires a type ' // &
4023	'( and vice versa ) in case the ' // &
4024	'urban-surface model is applied. ' // &
4025	'i, j = ', i, j
4026	CALL message( 'netcdf_data_input_mod', 'PA0573', &
4027	2, 2, myid, 6, 0 )
4028	ENDIF
4029	ENDIF
4030	IF ( buildings_f%lod == 2 ) THEN
4031	IF ( ANY( buildings_f%var_3d(:,j,i) == 1 ) .AND. &
4032	building_type_f%var(j,i) == building_type_f%fill ) THEN
4033	WRITE( message_string, * ) 'Each location where a ' // &
4034	'building is set requires a type ' // &
4035	'( and vice versa ) in case the ' // &
4036	'urban-surface model is applied. ' // &
4037	'i, j = ', i, j
4038	CALL message( 'netcdf_data_input_mod', 'PA0573', &
4039	2, 2, myid, 6, 0 )
4040	ENDIF
4041	ENDIF
4042	ENDIF
4043	!
4044	!-- Check if at each location where a building is present also an ID
4045	!-- is set and vice versa.
4046	IF ( buildings_f%from_file ) THEN
4047	IF ( buildings_f%lod == 1 ) THEN
4048	IF ( buildings_f%var_2d(j,i) /= buildings_f%fill1 .AND. &
4049	building_id_f%var(j,i) == building_id_f%fill ) THEN
4050	WRITE( message_string, * ) 'Each location where a ' // &
4051	'building is set requires an ID ' // &
4052	'( and vice versa ). i, j = ', i, j
4053	CALL message( 'netcdf_data_input_mod', 'PA0574', &
4054	2, 2, myid, 6, 0 )
4055	ENDIF
4056	ELSEIF ( buildings_f%lod == 2 ) THEN
4057	IF ( ANY( buildings_f%var_3d(:,j,i) == 1 ) .AND. &
4058	building_id_f%var(j,i) == building_id_f%fill ) THEN
4059	WRITE( message_string, * ) 'Each location where a ' // &
4060	'building is set requires an ID ' // &
4061	'( and vice versa ). i, j = ', i, j
4062	CALL message( 'netcdf_data_input_mod', 'PA0574', &
4063	2, 2, myid, 6, 0 )
4064	ENDIF
4065	ENDIF
4066	ENDIF
4067	!
4068	!-- Check if building ID is set where a bulding is defined.
4069	IF ( buildings_f%from_file ) THEN
4070	IF ( buildings_f%lod == 1 ) THEN
4071	IF ( buildings_f%var_2d(j,i) /= buildings_f%fill1 .AND. &
4072	building_id_f%var(j,i) == building_id_f%fill ) THEN
4073	WRITE( message_string, * ) 'Each building grid point '// &
4074	'requires an ID.', i, j
4075	CALL message( 'netcdf_data_input_mod', 'PA0575', &
4076	2, 2, myid, 6, 0 )
4077	ENDIF
4078	ELSEIF ( buildings_f%lod == 2 ) THEN
4079	IF ( ANY( buildings_f%var_3d(:,j,i) == 1 ) .AND. &
4080	building_id_f%var(j,i) == building_id_f%fill ) THEN
4081	WRITE( message_string, * ) 'Each building grid point '// &
4082	'requires an ID.', i, j
4083	CALL message( 'netcdf_data_input_mod', 'PA0575', &
4084	2, 2, myid, 6, 0 )
4085	ENDIF
4086	ENDIF
4087	ENDIF
4088	!
4089	!-- Check albedo parameters. If albedo_type is 0, all parameters
4090	!-- must be set.
4091	IF ( albedo_type_f%from_file ) THEN
4092	IF ( albedo_type_f%var(j,i) == 0 ) THEN
4093	IF ( ANY( albedo_pars_f%pars_xy(:,j,i) == &
4094	albedo_pars_f%fill ) ) THEN
4095	message_string = 'If albedo_type(y,x) = 0, all ' // &
4096	'parameters of albedo_pars at this ' // &
4097	'location must be set.'
4098	CALL message( 'netcdf_data_input_mod', 'PA0576', &
4099	2, 2, myid, 6, 0 )
4100	ENDIF
4101	ENDIF
4102	ENDIF
4103
4104	!
4105	!-- Check pavement parameters. If pavement_type is 0, all parameters
4106	!-- of pavement_pars must be set at this location.
4107	IF ( pavement_type_f%from_file ) THEN
4108	IF ( pavement_type_f%var(j,i) == 0 ) THEN
4109	IF ( ANY( pavement_pars_f%pars_xy(:,j,i) == &
4110	pavement_pars_f%fill ) ) THEN
4111	message_string = 'If pavement_type(y,x) = 0, all ' // &
4112	'parameters of pavement_pars at this '//&
4113	'location must be set.'
4114	CALL message( 'netcdf_data_input_mod', 'PA0577', &
4115	2, 2, myid, 6, 0 )
4116	ENDIF
4117	ENDIF
4118	ENDIF
4119	!
4120	!-- Check pavement-subsurface parameters. If pavement_type is 0,
4121	!-- all parameters of pavement_subsurface_pars must be set at this
4122	!-- location.
4123	IF ( pavement_type_f%from_file ) THEN
4124	IF ( pavement_type_f%var(j,i) == 0 ) THEN
4125	IF ( ANY( pavement_subsurface_pars_f%pars_xyz(:,:,j,i) == &
4126	pavement_subsurface_pars_f%fill ) ) THEN
4127	message_string = 'If pavement_type(y,x) = 0, all ' // &
4128	'parameters of ' // &
4129	'pavement_subsurface_pars at this '// &
4130	'location must be set.'
4131	CALL message( 'netcdf_data_input_mod', 'PA0578', &
4132	2, 2, myid, 6, 0 )
4133	ENDIF
4134	ENDIF
4135	ENDIF
4136
4137	!
4138	!-- Check water parameters. If water_type is 0, all parameters
4139	!-- must be set at this location.
4140	IF ( water_type_f%from_file ) THEN
4141	IF ( water_type_f%var(j,i) == 0 ) THEN
4142	IF ( ANY( water_pars_f%pars_xy(:,j,i) == &
4143	water_pars_f%fill ) ) THEN
4144	message_string = 'If water_type(y,x) = 0, all ' // &
4145	'parameters of water_pars at this ' // &
4146	'location must be set.'
4147	CALL message( 'netcdf_data_input_mod', 'PA0579', &
4148	2, 2, myid, 6, 0 )
4149	ENDIF
4150	ENDIF
4151	ENDIF
4152
4153	ENDDO
4154	ENDDO
4155
4156	END SUBROUTINE netcdf_data_input_check_static
4157
4158	!------------------------------------------------------------------------------!
4159	! Description:
4160	! ------------
4161	!> Resize 8-bit 2D Integer array: (nys:nyn,nxl:nxr) -> (nysg:nyng,nxlg:nxrg)
4162	!------------------------------------------------------------------------------!
4163	SUBROUTINE resize_array_2d_int8( var, js, je, is, ie )
4164
4165	IMPLICIT NONE
4166
4167	INTEGER(iwp) :: je !< upper index bound along y direction
4168	INTEGER(iwp) :: js !< lower index bound along y direction
4169	INTEGER(iwp) :: ie !< upper index bound along x direction
4170	INTEGER(iwp) :: is !< lower index bound along x direction
4171
4172	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var !< treated variable
4173	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var_tmp !< temporary copy
4174	!
4175	!-- Allocate temporary variable
4176	ALLOCATE( var_tmp(js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4177	!
4178	!-- Temporary copy of the variable
4179	var_tmp(js:je,is:ie) = var(js:je,is:ie)
4180	!
4181	!-- Resize the array
4182	DEALLOCATE( var )
4183	ALLOCATE( var(js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4184	!
4185	!-- Transfer temporary copy back to original array
4186	var(js:je,is:ie) = var_tmp(js:je,is:ie)
4187
4188	END SUBROUTINE resize_array_2d_int8
4189
4190	!------------------------------------------------------------------------------!
4191	! Description:
4192	! ------------
4193	!> Resize 32-bit 2D Integer array: (nys:nyn,nxl:nxr) -> (nysg:nyng,nxlg:nxrg)
4194	!------------------------------------------------------------------------------!
4195	SUBROUTINE resize_array_2d_int32( var, js, je, is, ie )
4196
4197	IMPLICIT NONE
4198
4199	INTEGER(iwp) :: je !< upper index bound along y direction
4200	INTEGER(iwp) :: js !< lower index bound along y direction
4201	INTEGER(iwp) :: ie !< upper index bound along x direction
4202	INTEGER(iwp) :: is !< lower index bound along x direction
4203
4204	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: var !< treated variable
4205	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: var_tmp !< temporary copy
4206	!
4207	!-- Allocate temporary variable
4208	ALLOCATE( var_tmp(js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4209	!
4210	!-- Temporary copy of the variable
4211	var_tmp(js:je,is:ie) = var(js:je,is:ie)
4212	!
4213	!-- Resize the array
4214	DEALLOCATE( var )
4215	ALLOCATE( var(js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4216	!
4217	!-- Transfer temporary copy back to original array
4218	var(js:je,is:ie) = var_tmp(js:je,is:ie)
4219
4220	END SUBROUTINE resize_array_2d_int32
4221
4222	!------------------------------------------------------------------------------!
4223	! Description:
4224	! ------------
4225	!> Resize 8-bit 3D Integer array: (:,nys:nyn,nxl:nxr) -> (:,nysg:nyng,nxlg:nxrg)
4226	!------------------------------------------------------------------------------!
4227	SUBROUTINE resize_array_3d_int8( var, ks, ke, js, je, is, ie )
4228
4229	IMPLICIT NONE
4230
4231	INTEGER(iwp) :: je !< upper index bound along y direction
4232	INTEGER(iwp) :: js !< lower index bound along y direction
4233	INTEGER(iwp) :: ie !< upper index bound along x direction
4234	INTEGER(iwp) :: is !< lower index bound along x direction
4235	INTEGER(iwp) :: ke !< upper bound of treated array in z-direction
4236	INTEGER(iwp) :: ks !< lower bound of treated array in z-direction
4237
4238	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var !< treated variable
4239	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_tmp !< temporary copy
4240	!
4241	!-- Allocate temporary variable
4242	ALLOCATE( var_tmp(ks:ke,js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4243	!
4244	!-- Temporary copy of the variable
4245	var_tmp(ks:ke,js:je,is:ie) = var(ks:ke,js:je,is:ie)
4246	!
4247	!-- Resize the array
4248	DEALLOCATE( var )
4249	ALLOCATE( var(ks:ke,js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4250	!
4251	!-- Transfer temporary copy back to original array
4252	var(ks:ke,js:je,is:ie) = var_tmp(ks:ke,js:je,is:ie)
4253
4254	END SUBROUTINE resize_array_3d_int8
4255
4256	!------------------------------------------------------------------------------!
4257	! Description:
4258	! ------------
4259	!> Resize 3D Real array: (:,nys:nyn,nxl:nxr) -> (:,nysg:nyng,nxlg:nxrg)
4260	!------------------------------------------------------------------------------!
4261	SUBROUTINE resize_array_3d_real( var, ks, ke, js, je, is, ie )
4262
4263	IMPLICIT NONE
4264
4265	INTEGER(iwp) :: je !< upper index bound along y direction
4266	INTEGER(iwp) :: js !< lower index bound along y direction
4267	INTEGER(iwp) :: ie !< upper index bound along x direction
4268	INTEGER(iwp) :: is !< lower index bound along x direction
4269	INTEGER(iwp) :: ke !< upper bound of treated array in z-direction
4270	INTEGER(iwp) :: ks !< lower bound of treated array in z-direction
4271
4272	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: var !< treated variable
4273	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: var_tmp !< temporary copy
4274	!
4275	!-- Allocate temporary variable
4276	ALLOCATE( var_tmp(ks:ke,js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4277	!
4278	!-- Temporary copy of the variable
4279	var_tmp(ks:ke,js:je,is:ie) = var(ks:ke,js:je,is:ie)
4280	!
4281	!-- Resize the array
4282	DEALLOCATE( var )
4283	ALLOCATE( var(ks:ke,js-nbgp:je+nbgp,is-nbgp:ie+nbgp) )
4284	!
4285	!-- Transfer temporary copy back to original array
4286	var(ks:ke,js:je,is:ie) = var_tmp(ks:ke,js:je,is:ie)
4287
4288	END SUBROUTINE resize_array_3d_real
4289
4290	!------------------------------------------------------------------------------!
4291	! Description:
4292	! ------------
4293	!> Resize 4D Real array: (:,:,nys:nyn,nxl:nxr) -> (:,nysg:nyng,nxlg:nxrg)
4294	!------------------------------------------------------------------------------!
4295	SUBROUTINE resize_array_4d_real( var, k1s, k1e, k2s, k2e, js, je, is, ie )
4296
4297	IMPLICIT NONE
4298
4299	INTEGER(iwp) :: je !< upper index bound along y direction
4300	INTEGER(iwp) :: js !< lower index bound along y direction
4301	INTEGER(iwp) :: ie !< upper index bound along x direction
4302	INTEGER(iwp) :: is !< lower index bound along x direction
4303	INTEGER(iwp) :: k1e !< upper bound of treated array in z-direction
4304	INTEGER(iwp) :: k1s !< lower bound of treated array in z-direction
4305	INTEGER(iwp) :: k2e !< upper bound of treated array along parameter space
4306	�