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netcdf_data_input_mod.f90 @ 3518

Last change on this file since 3518 was 3518, checked in by suehring, 6 years ago
additional checks for static input file
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1	!> @file netcdf_data_input_mod.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! -----------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: netcdf_data_input_mod.f90 3518 2018-11-12 18:10:23Z suehring $
27	! Additional checks
28	!
29	! 3516 2018-11-12 15:49:39Z gronemeier
30	! bugfix: - difference in z coordinate between file and PALM must be <1e-6
31	! - output of error 553 for all PEs
32	!
33	! 3498 2018-11-07 10:53:03Z gronemeier
34	! Bugfix: print error message by processor which encounters the error
35	!
36	! 3485 2018-11-03 17:09:40Z gronemeier
37	! - get central meridian from origin_lon if crs does not exist
38	! - set default origin_lon to 0
39	!
40	! 3483 2018-11-02 14:19:26Z raasch
41	! bugfix: misplaced directives for netCDF fixed
42	!
43	! 3474 2018-10-30 21:07:39Z kanani
44	! Add UV exposure model input (Schrempf)
45	!
46	! 3472 2018-10-30 20:43:50Z suehring
47	! Salsa implemented
48	!
49	! 3464 2018-10-30 18:08:55Z kanani
50	! Define coordinate reference system (crs) and read from input dataset
51	! Revise default values for reference coordinates
52	!
53	! 3459 2018-10-30 15:04:11Z gronemeier
54	! from chemistry branch r3443, banzhafs, Russo:
55	! Uncommented lines on dimension of surface_fractions
56	! Removed par_emis_time_factor variable, moved to chem_emissions_mod
57	! Initialized nspec and other emission variables at time of declaration
58	! Modified EXPERT mode to PRE-PROCESSED mode
59	! Introduced Chemistry static netcdf file
60	! Added the routine for reading-in netcdf data for chemistry
61	! Added routines to get_variable interface specific for chemistry files
62	!
63	! 3429 2018-10-25 13:04:23Z knoop
64	! add default values of origin_x/y/z
65	!
66	! 3404 2018-10-23 13:29:11Z suehring
67	! Consider time-dependent geostrophic wind components in offline nesting
68	!
69	! 3376 2018-10-19 10:15:32Z suehring
70	! Additional check for consistent building initialization implemented
71	!
72	! 3347 2018-10-15 14:21:08Z suehring
73	! Subroutine renamed
74	!
75	! 3257 2018-09-17 17:11:46Z suehring
76	! (from branch resler)
77	! Formatting
78	!
79	! 3298 2018-10-02 12:21:11Z kanani
80	! Modified EXPERT mode to PRE-PROCESSED mode (Russo)
81	! Introduced Chemistry static netcdf file (Russo)
82	! Added the routine for reading-in netcdf data for chemistry (Russo)
83	! Added routines to get_variable interface specific for chemistry files (Russo)
84	!
85	! 3257 2018-09-17 17:11:46Z suehring
86	! Adjust checks for building_type and building_id, which is necessary after
87	! topography filtering (building_type and id can be modified by the filtering).
88	!
89	! 3254 2018-09-17 10:53:57Z suehring
90	! Additional check for surface_fractions and and checks for building_id and
91	! building_type extended.
92	!
93	! 3241 2018-09-12 15:02:00Z raasch
94	! unused variables removed
95	!
96	! 3215 2018-08-29 09:58:59Z suehring
97	! - Separate input of soil properties from input of atmospheric data. This
98	! enables input of soil properties also in child domains without any
99	! dependence on atmospheric input
100	! - Check for missing initial 1D/3D data in dynamic input file
101	! - Revise checks for matching grid spacing in model and input file
102	! - Bugfix, add netcdf4_parallel directive for collective read operation
103	! - Revise error message numbers
104	!
105	! 3209 2018-08-27 16:58:37Z suehring
106	! Read zsoil dimension length only if soil variables are provided
107	!
108	! 3183 2018-07-27 14:25:55Z suehring
109	! Adjust input of dynamic driver according to revised Inifor version.
110	! Replace simulated_time by time_since_reference_point.
111	! Rename variables in mesoscale-offline nesting mode.
112	!
113	! 3182 2018-07-27 13:36:03Z suehring
114	! Slightly revise check for surface_fraction in order to check only the relevant
115	! fractions
116	!
117	! 3103 2018-07-04 17:30:52Z suehring
118	! New check for negative terrain heights
119	!
120	! 3089 2018-06-27 13:20:38Z suehring
121	! Revise call for message routine in case of local data inconsistencies.
122	!
123	! 3054 2018-06-01 16:08:59Z gronemeier
124	! Bugfix: force an MPI abort if errors occur while reading building heights
125	! from ASCII file
126	!
127	! 3053 2018-06-01 12:59:07Z suehring
128	! Revise checks for variable surface_fraction
129	!
130	! 3051 2018-05-30 17:43:55Z suehring
131	! - Speed-up NetCDF input
132	! - Revise input routines and remove NetCDF input via IO-blocks since this is
133	! not working in parallel mode in case blocking collective read operations
134	! are done
135	! - Temporarily revoke renaming of input variables in dynamic driver (tend_ug,
136	! tend_vg, zsoil) in order to keep dynamic input file working with current
137	! model version
138	! - More detailed error messages created
139	!
140	! 3045 2018-05-28 07:55:41Z Giersch
141	! Error messages revised
142	!
143	! 3041 2018-05-25 10:39:54Z gronemeier
144	! Add data type for global file attributes
145	! Add read of global attributes of static driver
146	!
147	! 3037 2018-05-24 10:39:29Z gronemeier
148	! renamed 'depth' to 'zsoil'
149	!
150	! 3036 2018-05-24 10:18:26Z gronemeier
151	! Revision of input vars according to UC2 data standard
152	! - renamed 'orography_2D' to 'zt'
153	! - renamed 'buildings_2D' to 'buildings_2d'
154	! - renamed 'buildings_3D' to 'buildings_3d'
155	! - renamed 'leaf_are_density' to 'lad'
156	! - renamed 'basal_are_density' to 'bad'
157	! - renamed 'root_are_density_lad' to 'root_area_dens_r'
158	! - renamed 'root_are_density_lsm' to 'root_area_dens_s'
159	! - renamed 'ls_forcing_ug' to 'tend_ug'
160	! - renamed 'ls_forcing_vg' to 'tend_vg'
161	!
162	! 3019 2018-05-13 07:05:43Z maronga
163	! Improved reading speed of large NetCDF files
164	!
165	! 2963 2018-04-12 14:47:44Z suehring
166	! - Revise checks for static input variables.
167	! - Introduce index for vegetation/wall, pavement/green-wall and water/window
168	! surfaces, for clearer access of surface fraction, albedo, emissivity, etc. .
169	!
170	! 2958 2018-04-11 15:38:13Z suehring
171	! Synchronize longitude and latitude between nested model domains, values are
172	! taken from the root model.
173	!
174	! 2955 2018-04-09 15:14:01Z suehring
175	! Extend checks for consistent setting of buildings, its ID and type.
176	! Add log-points to measure CPU time of NetCDF data input.
177	!
178	! 2953 2018-04-09 11:26:02Z suehring
179	! Bugfix in checks for initialization data
180	!
181	! 2947 2018-04-04 18:01:41Z suehring
182	! Checks for dynamic input revised
183	!
184	! 2946 2018-04-04 17:01:23Z suehring
185	! Bugfix for revision 2945, perform checks only if dynamic input file is
186	! available.
187	!
188	! 2945 2018-04-04 16:27:14Z suehring
189	! - Mimic for topography input slightly revised, in order to enable consistency
190	! checks
191	! - Add checks for dimensions in dynamic input file and move already existing
192	! checks
193	!
194	! 2938 2018-03-27 15:52:42Z suehring
195	! Initial read of geostrophic wind components from dynamic driver.
196	!
197	! 2773 2018-01-30 14:12:54Z suehring
198	! Revise checks for surface_fraction.
199	!
200	! 2925 2018-03-23 14:54:11Z suehring
201	! Check for further inconsistent settings of surface_fractions.
202	! Some messages slightly rephrased and error numbers renamed.
203	!
204	! 2898 2018-03-15 13:03:01Z suehring
205	! Check if each building has a type. Further, check if dimensions in static
206	! input file match the model dimensions.
207	!
208	! 2897 2018-03-15 11:47:16Z suehring
209	! Relax restrictions for topography input, terrain and building heights can be
210	! input separately and are not mandatory any more.
211	!
212	! 2874 2018-03-13 10:55:42Z knoop
213	! Bugfix: wrong placement of netcdf cpp-macros fixed
214	!
215	! 2794 2018-02-07 14:09:43Z knoop
216	! Check if 3D building input is consistent to numeric grid.
217	!
218	! 2773 2018-01-30 14:12:54Z suehring
219	! - Enable initialization with 3D topography.
220	! - Move check for correct initialization in nesting mode to check_parameters.
221	!
222	! 2772 2018-01-29 13:10:35Z suehring
223	! Initialization of simulation independent on land-surface model.
224	!
225	! 2746 2018-01-15 12:06:04Z suehring
226	! Read plant-canopy variables independently on land-surface model usage
227	!
228	! 2718 2018-01-02 08:49:38Z maronga
229	! Corrected "Former revisions" section
230	!
231	! 2711 2017-12-20 17:04:49Z suehring
232	! Rename subroutine close_file to avoid double-naming.
233	!
234	! 2700 2017-12-15 14:12:35Z suehring
235	!
236	! 2696 2017-12-14 17:12:51Z kanani
237	! Initial revision (suehring)
238	!
239	!
240	!
241	!
242	! Authors:
243	! --------
244	! @author Matthias Suehring
245	!
246	! Description:
247	! ------------
248	!> Modulue contains routines to input data according to Palm input data
249	!> standart using dynamic and static input files.
250	!> @todo - Chemistry: revise reading of netcdf file and ajdust formatting according to standard!!!
251	!> @todo - Order input alphabetically
252	!> @todo - Revise error messages and error numbers
253	!> @todo - Input of missing quantities (chemical species, emission rates)
254	!> @todo - Defninition and input of still missing variable attributes
255	!> @todo - Input of initial geostrophic wind profiles with cyclic conditions.
256	!------------------------------------------------------------------------------!
257	MODULE netcdf_data_input_mod
258
259	USE control_parameters, &
260	ONLY: coupling_char, io_blocks, io_group
261
262	USE cpulog, &
263	ONLY: cpu_log, log_point_s
264
265	USE kinds
266
267	#if defined ( __netcdf )
268	USE NETCDF
269	#endif
270
271	USE pegrid
272
273	USE surface_mod, &
274	ONLY: ind_pav_green, ind_veg_wall, ind_wat_win
275	!
276	!-- Define type for dimensions.
277	TYPE dims_xy
278	INTEGER(iwp) :: nx !< dimension length in x
279	INTEGER(iwp) :: ny !< dimension length in y
280	INTEGER(iwp) :: nz !< dimension length in z
281	REAL(wp), DIMENSION(:), ALLOCATABLE :: x !< dimension array in x
282	REAL(wp), DIMENSION(:), ALLOCATABLE :: y !< dimension array in y
283	REAL(wp), DIMENSION(:), ALLOCATABLE :: z !< dimension array in z
284	END TYPE dims_xy
285	!
286	!-- Define data type for nesting in larger-scale models like COSMO.
287	!-- Data type comprises u, v, w, pt, and q at lateral and top boundaries.
288	TYPE nest_offl_type
289
290	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names
291
292	INTEGER(iwp) :: nt !< number of time levels in dynamic input file
293	INTEGER(iwp) :: nzu !< number of vertical levels on scalar grid in dynamic input file
294	INTEGER(iwp) :: nzw !< number of vertical levels on w grid in dynamic input file
295	INTEGER(iwp) :: tind !< time index for reference time in mesoscale-offline nesting
296	INTEGER(iwp) :: tind_p !< time index for following time in mesoscale-offline nesting
297
298	LOGICAL :: init = .FALSE.
299	LOGICAL :: from_file = .FALSE.
300
301	REAL(wp), DIMENSION(:), ALLOCATABLE :: surface_pressure !< time dependent surface pressure
302	REAL(wp), DIMENSION(:), ALLOCATABLE :: time !< time levels in dynamic input file
303	REAL(wp), DIMENSION(:), ALLOCATABLE :: zu_atmos !< vertical levels at scalar grid in dynamic input file
304	REAL(wp), DIMENSION(:), ALLOCATABLE :: zw_atmos !< vertical levels at w grid in dynamic input file
305
306	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: ug !< domain-averaged geostrophic component
307	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: vg !< domain-averaged geostrophic component
308
309	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_left !< u-component at left boundary
310	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_left !< v-component at left boundary
311	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_left !< w-component at left boundary
312	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_left !< mixing ratio at left boundary
313	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_left !< potentital temperautre at left boundary
314
315	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_north !< u-component at north boundary
316	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_north !< v-component at north boundary
317	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_north !< w-component at north boundary
318	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_north !< mixing ratio at north boundary
319	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_north !< potentital temperautre at north boundary
320
321	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_right !< u-component at right boundary
322	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_right !< v-component at right boundary
323	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_right !< w-component at right boundary
324	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_right !< mixing ratio at right boundary
325	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_right !< potentital temperautre at right boundary
326
327	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_south !< u-component at south boundary
328	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_south !< v-component at south boundary
329	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_south !< w-component at south boundary
330	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_south !< mixing ratio at south boundary
331	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_south !< potentital temperautre at south boundary
332
333	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: u_top !< u-component at top boundary
334	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: v_top !< v-component at top boundary
335	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: w_top !< w-component at top boundary
336	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: q_top !< mixing ratio at top boundary
337	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pt_top !< potentital temperautre at top boundary
338
339	END TYPE nest_offl_type
340
341	TYPE init_type
342
343	CHARACTER(LEN=23) :: origin_time !< reference time of input data
344
345	INTEGER(iwp) :: lod_msoil !< level of detail - soil moisture
346	INTEGER(iwp) :: lod_pt !< level of detail - pt
347	INTEGER(iwp) :: lod_q !< level of detail - q
348	INTEGER(iwp) :: lod_tsoil !< level of detail - soil temperature
349	INTEGER(iwp) :: lod_u !< level of detail - u-component
350	INTEGER(iwp) :: lod_v !< level of detail - v-component
351	INTEGER(iwp) :: lod_w !< level of detail - w-component
352	INTEGER(iwp) :: nx !< number of scalar grid points along x in dynamic input file
353	INTEGER(iwp) :: nxu !< number of u grid points along x in dynamic input file
354	INTEGER(iwp) :: ny !< number of scalar grid points along y in dynamic input file
355	INTEGER(iwp) :: nyv !< number of v grid points along y in dynamic input file
356	INTEGER(iwp) :: nzs !< number of vertical soil levels in dynamic input file
357	INTEGER(iwp) :: nzu !< number of vertical levels on scalar grid in dynamic input file
358	INTEGER(iwp) :: nzw !< number of vertical levels on w grid in dynamic input file
359
360	LOGICAL :: from_file_msoil = .FALSE. !< flag indicating whether soil moisture is already initialized from file
361	LOGICAL :: from_file_pt = .FALSE. !< flag indicating whether pt is already initialized from file
362	LOGICAL :: from_file_q = .FALSE. !< flag indicating whether q is already initialized from file
363	LOGICAL :: from_file_tsoil = .FALSE. !< flag indicating whether soil temperature is already initialized from file
364	LOGICAL :: from_file_u = .FALSE. !< flag indicating whether u is already initialized from file
365	LOGICAL :: from_file_ug = .FALSE. !< flag indicating whether ug is already initialized from file
366	LOGICAL :: from_file_v = .FALSE. !< flag indicating whether v is already initialized from file
367	LOGICAL :: from_file_vg = .FALSE. !< flag indicating whether ug is already initialized from file
368	LOGICAL :: from_file_w = .FALSE. !< flag indicating whether w is already initialized from file
369
370	REAL(wp) :: fill_msoil !< fill value for soil moisture
371	REAL(wp) :: fill_pt !< fill value for pt
372	REAL(wp) :: fill_q !< fill value for q
373	REAL(wp) :: fill_tsoil !< fill value for soil temperature
374	REAL(wp) :: fill_u !< fill value for u
375	REAL(wp) :: fill_v !< fill value for v
376	REAL(wp) :: fill_w !< fill value for w
377	REAL(wp) :: latitude = 0.0_wp !< latitude of the lower left corner
378	REAL(wp) :: longitude = 0.0_wp !< longitude of the lower left corner
379	REAL(wp) :: origin_x = 500000.0_wp !< UTM easting of the lower left corner
380	REAL(wp) :: origin_y = 0.0_wp !< UTM northing of the lower left corner
381	REAL(wp) :: origin_z = 0.0_wp !< reference height of input data
382	REAL(wp) :: rotation_angle = 0.0_wp !< rotation angle of input data
383
384	REAL(wp), DIMENSION(:), ALLOCATABLE :: msoil_1d !< initial vertical profile of soil moisture
385	REAL(wp), DIMENSION(:), ALLOCATABLE :: pt_init !< initial vertical profile of pt
386	REAL(wp), DIMENSION(:), ALLOCATABLE :: q_init !< initial vertical profile of q
387	REAL(wp), DIMENSION(:), ALLOCATABLE :: tsoil_1d !< initial vertical profile of soil temperature
388	REAL(wp), DIMENSION(:), ALLOCATABLE :: u_init !< initial vertical profile of u
389	REAL(wp), DIMENSION(:), ALLOCATABLE :: ug_init !< initial vertical profile of ug
390	REAL(wp), DIMENSION(:), ALLOCATABLE :: v_init !< initial vertical profile of v
391	REAL(wp), DIMENSION(:), ALLOCATABLE :: vg_init !< initial vertical profile of ug
392	REAL(wp), DIMENSION(:), ALLOCATABLE :: w_init !< initial vertical profile of w
393	REAL(wp), DIMENSION(:), ALLOCATABLE :: z_soil !< vertical levels in soil in dynamic input file, used for interpolation
394	REAL(wp), DIMENSION(:), ALLOCATABLE :: zu_atmos !< vertical levels at scalar grid in dynamic input file, used for interpolation
395	REAL(wp), DIMENSION(:), ALLOCATABLE :: zw_atmos !< vertical levels at w grid in dynamic input file, used for interpolation
396
397
398	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: msoil_3d !< initial 3d soil moisture provide by Inifor and interpolated onto soil grid
399	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: tsoil_3d !< initial 3d soil temperature provide by Inifor and interpolated onto soil grid
400
401	END TYPE init_type
402
403	!-- Data type for the general information of chemistry emissions, do not dependent on the particular chemical species
404	TYPE chem_emis_att_type
405
406	!-DIMENSIONS
407	INTEGER(iwp) :: nspec=0 !< number of chem species for which emission values are provided
408	INTEGER(iwp) :: ncat=0 !< number of emission categories
409	INTEGER(iwp) :: nvoc=0 !< number of VOCs components
410	INTEGER(iwp) :: npm=0 !< number of PMs components
411	INTEGER(iwp) :: nnox=2 !< number of NOx components: NO and NO2
412	INTEGER(iwp) :: nsox=2 !< number of SOx components: SO and SO4
413	INTEGER(iwp) :: nhoursyear !< number of hours of a specific year in the HOURLY mode
414	! of the default mode
415	INTEGER(iwp) :: nmonthdayhour !< number of month days and hours in the MDH mode
416	! of the default mode
417	INTEGER(iwp) :: dt_emission !< Number of emissions timesteps for one year
418	! in the pre-processed emissions case
419	!-- 1d emission input variables
420	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: pm_name !< Names of PMs components
421	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: cat_name !< Emission categories names
422	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: species_name !< Names of emission chemical species
423	CHARACTER (LEN=25),ALLOCATABLE, DIMENSION(:) :: voc_name !< Names of VOCs components
424	CHARACTER (LEN=25) :: units !< Units
425
426	INTEGER(iwp) :: i_hour !< indices for assigning the emission values at different timesteps
427	INTEGER(iwp),ALLOCATABLE, DIMENSION(:) :: cat_index !< Index of emission categories
428	INTEGER(iwp),ALLOCATABLE, DIMENSION(:) :: species_index !< Index of emission chem species
429
430	REAL(wp),ALLOCATABLE, DIMENSION(:) :: xm !< Molecular masses of emission chem species
431
432	!-- 2d emission input variables
433	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: hourly_emis_time_factor !< Time factors for HOURLY emissions (DEFAULT mode)
434	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: mdh_emis_time_factor !< Time factors for MDH emissions (DEFAULT mode)
435	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: nox_comp !< Composition of NO and NO2
436	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: sox_comp !< Composition of SO2 and SO4
437	REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: voc_comp !< Composition of different VOC components (number not fixed)
438
439	!-- 3d emission input variables
440	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:) :: pm_comp !< Composition of different PMs components (number not fixed)
441
442	END TYPE chem_emis_att_type
443
444
445	!-- Data type for the values of chemistry emissions ERUSSO
446	TYPE chem_emis_val_type
447
448	!REAL(wp),ALLOCATABLE, DIMENSION(:,:) :: stack_height !< stack height
449
450	!-- 3d emission input variables
451	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:) :: default_emission_data !< Input Values emissions DEFAULT mode
452
453	!-- 4d emission input variables
454	REAL(wp),ALLOCATABLE, DIMENSION(:,:,:,:) :: preproc_emission_data !< Input Values emissions PRE-PROCESSED mode
455
456	END TYPE chem_emis_val_type
457
458	!
459	!-- Define data structures for different input data types.
460	!-- 8-bit Integer 2D
461	TYPE int_2d_8bit
462	INTEGER(KIND=1) :: fill = -127 !< fill value
463	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
464
465	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
466	END TYPE int_2d_8bit
467	!
468	!-- 8-bit Integer 3D
469	TYPE int_3d_8bit
470	INTEGER(KIND=1) :: fill = -127 !< fill value
471	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< respective variable
472
473	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
474	END TYPE int_3d_8bit
475	!
476	!-- 32-bit Integer 2D
477	TYPE int_2d_32bit
478	INTEGER(iwp) :: fill = -9999 !< fill value
479	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
480
481	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
482	END TYPE int_2d_32bit
483
484	!
485	!-- Define data type to read 2D real variables
486	TYPE real_2d
487	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
488
489	REAL(wp) :: fill = -9999.9_wp !< fill value
490	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: var !< respective variable
491	END TYPE real_2d
492
493	!
494	!-- Define data type to read 3D real variables
495	TYPE real_3d
496	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
497
498	INTEGER(iwp) :: nz !< number of grid points along vertical dimension
499
500	REAL(wp) :: fill = -9999.9_wp !< fill value
501	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: var !< respective variable
502	END TYPE real_3d
503	!
504	!-- Define data structure where the dimension and type of the input depends
505	!-- on the given level of detail.
506	!-- For buildings, the input is either 2D float, or 3d byte.
507	TYPE build_in
508	INTEGER(iwp) :: lod = 1 !< level of detail
509	INTEGER(KIND=1) :: fill2 = -127 !< fill value for lod = 2
510	INTEGER(iwp) :: nz !< number of vertical layers in file
511	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< 3d variable (lod = 2)
512
513	REAL(wp), DIMENSION(:), ALLOCATABLE :: z !< vertical coordinate for 3D building, used for consistency check
514
515	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
516
517	REAL(wp) :: fill1 = -9999.9_wp !< fill values for lod = 1
518	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: var_2d !< 2d variable (lod = 1)
519	END TYPE build_in
520
521	!
522	!-- For soil_type, the input is either 2D or 3D one-byte integer.
523	TYPE soil_in
524	INTEGER(iwp) :: lod = 1 !< level of detail
525	INTEGER(KIND=1) :: fill = -127 !< fill value for lod = 2
526	INTEGER(KIND=1), DIMENSION(:,:), ALLOCATABLE :: var_2d !< 2d variable (lod = 1)
527	INTEGER(KIND=1), DIMENSION(:,:,:), ALLOCATABLE :: var_3d !< 3d variable (lod = 2)
528
529	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
530	END TYPE soil_in
531
532	!
533	!-- Define data type for fractions between surface types
534	TYPE fracs
535	INTEGER(iwp) :: nf !< total number of fractions
536	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: nfracs !< dimension array for fraction
537
538	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
539
540	REAL(wp) :: fill = -9999.9_wp !< fill value
541	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: frac !< respective fraction between different surface types
542	END TYPE fracs
543	!
544	!-- Data type for parameter lists, Depending on the given level of detail,
545	!-- the input is 3D or 4D
546	TYPE pars
547	INTEGER(iwp) :: lod = 1 !< level of detail
548	INTEGER(iwp) :: np !< total number of parameters
549	INTEGER(iwp) :: nz !< vertical dimension - number of soil layers
550	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: layers !< dimension array for soil layers
551	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: pars !< dimension array for parameters
552
553	LOGICAL :: from_file = .FALSE. !< flag indicating whether an input variable is available and read from file or default values are used
554
555	REAL(wp) :: fill = -9999.9_wp !< fill value
556	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pars_xy !< respective parameters, level of detail = 1
557	REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: pars_xyz !< respective parameters, level of detail = 2
558	END TYPE pars
559	!
560	!-- Define type for global file attributes
561	!-- Please refer to the PALM data standard for a detailed description of each
562	!-- attribute.
563	TYPE global_atts_type
564	CHARACTER(LEN=12 ) :: acronym !< acronym of institution
565	CHARACTER(LEN=7) :: acronym_char = 'acronym' !< name of attribute
566	CHARACTER(LEN=200) :: author !< first name, last name, email adress
567	CHARACTER(LEN=6) :: author_char = 'author' !< name of attribute
568	CHARACTER(LEN=12 ) :: campaign !< name of campaign
569	CHARACTER(LEN=8) :: campaign_char = 'campaign' !< name of attribute
570	CHARACTER(LEN=200) :: comment !< comment to data
571	CHARACTER(LEN=7) :: comment_char = 'comment' !< name of attribute
572	CHARACTER(LEN=200) :: contact_person !< first name, last name, email adress
573	CHARACTER(LEN=14) :: contact_person_char = 'contact_person' !< name of attribute
574	CHARACTER(LEN=200) :: conventions = 'CF-1.7' !< netCDF convention
575	CHARACTER(LEN=11) :: conventions_char = 'Conventions' !< name of attribute
576	CHARACTER(LEN=23 ) :: creation_time !< creation time of data set
577	CHARACTER(LEN=13) :: creation_time_char = 'creation_time' !< name of attribute
578	CHARACTER(LEN=16 ) :: data_content !< content of data set
579	CHARACTER(LEN=12) :: data_content_char = 'data_content' !< name of attribute
580	CHARACTER(LEN=200) :: dependencies !< dependencies of data set
581	CHARACTER(LEN=12) :: dependencies_char = 'dependencies' !< name of attribute
582	CHARACTER(LEN=200) :: history !< information about data processing
583	CHARACTER(LEN=7) :: history_char = 'history' !< name of attribute
584	CHARACTER(LEN=200) :: institution !< name of responsible institution
585	CHARACTER(LEN=11) :: institution_char = 'institution' !< name of attribute
586	CHARACTER(LEN=200) :: keywords !< keywords of data set
587	CHARACTER(LEN=8) :: keywords_char = 'keywords' !< name of attribute
588	CHARACTER(LEN=200) :: license !< license of data set
589	CHARACTER(LEN=7) :: license_char = 'license' !< name of attribute
590	CHARACTER(LEN=200) :: location !< place which refers to data set
591	CHARACTER(LEN=8) :: location_char = 'location' !< name of attribute
592	CHARACTER(LEN=10) :: origin_lat_char = 'origin_lat' !< name of attribute
593	CHARACTER(LEN=10) :: origin_lon_char = 'origin_lon' !< name of attribute
594	CHARACTER(LEN=23 ) :: origin_time !< reference time
595	CHARACTER(LEN=11) :: origin_time_char = 'origin_time' !< name of attribute
596	CHARACTER(LEN=8) :: origin_x_char = 'origin_x' !< name of attribute
597	CHARACTER(LEN=8) :: origin_y_char = 'origin_y' !< name of attribute
598	CHARACTER(LEN=8) :: origin_z_char = 'origin_z' !< name of attribute
599	CHARACTER(LEN=12) :: palm_version_char = 'palm_version' !< name of attribute
600	CHARACTER(LEN=200) :: references !< literature referring to data set
601	CHARACTER(LEN=10) :: references_char = 'references' !< name of attribute
602	CHARACTER(LEN=14) :: rotation_angle_char = 'rotation_angle' !< name of attribute
603	CHARACTER(LEN=12 ) :: site !< name of model domain
604	CHARACTER(LEN=4) :: site_char = 'site' !< name of attribute
605	CHARACTER(LEN=200) :: source !< source of data set
606	CHARACTER(LEN=6) :: source_char = 'source' !< name of attribute
607	CHARACTER(LEN=200) :: title !< title of data set
608	CHARACTER(LEN=5) :: title_char = 'title' !< name of attribute
609	CHARACTER(LEN=7) :: version_char = 'version' !< name of attribute
610
611	INTEGER(iwp) :: version !< version of data set
612
613	REAL(wp) :: origin_lat !< latitude of lower left corner
614	REAL(wp) :: origin_lon !< longitude of lower left corner
615	REAL(wp) :: origin_x !< easting (UTM coordinate) of lower left corner
616	REAL(wp) :: origin_y !< northing (UTM coordinate) of lower left corner
617	REAL(wp) :: origin_z !< reference height
618	REAL(wp) :: palm_version !< PALM version of data set
619	REAL(wp) :: rotation_angle !< rotation angle of coordinate system of data set
620	END TYPE global_atts_type
621	!
622	!-- Define type for coordinate reference system (crs)
623	TYPE crs_type
624	CHARACTER(LEN=200) :: epsg_code = 'EPSG:25831' !< EPSG code
625	CHARACTER(LEN=200) :: grid_mapping_name = 'transverse_mercator' !< name of grid mapping
626	CHARACTER(LEN=200) :: long_name = 'coordinate reference system' !< name of variable crs
627	CHARACTER(LEN=200) :: units = 'm' !< unit of crs
628
629	REAL(wp) :: false_easting = 500000.0_wp !< false easting
630	REAL(wp) :: false_northing = 0.0_wp !< false northing
631	REAL(wp) :: inverse_flattening = 298.257223563_wp !< 1/f (default for WGS84)
632	REAL(wp) :: latitude_of_projection_origin = 0.0_wp !< latitude of projection origin
633	REAL(wp) :: longitude_of_central_meridian = 3.0_wp !< longitude of central meridian of UTM zone (default: zone 31)
634	REAL(wp) :: longitude_of_prime_meridian = 0.0_wp !< longitude of prime meridian
635	REAL(wp) :: scale_factor_at_central_meridian = 0.9996_wp !< scale factor of UTM coordinates
636	REAL(wp) :: semi_major_axis = 6378137.0_wp !< length of semi major axis (default for WGS84)
637	END TYPE crs_type
638
639	!
640	!-- Define variables
641	TYPE(crs_type) :: coord_ref_sys !< coordinate reference system
642
643	TYPE(dims_xy) :: dim_static !< data structure for x, y-dimension in static input file
644
645	TYPE(nest_offl_type) :: nest_offl !< data structure for data input at lateral and top boundaries (provided by Inifor)
646
647	TYPE(init_type) :: init_3d !< data structure for the initialization of the 3D flow and soil fields
648	TYPE(init_type) :: init_model !< data structure for the initialization of the model
649
650	!
651	!-- Define 2D variables of type NC_BYTE
652	TYPE(int_2d_8bit) :: albedo_type_f !< input variable for albedo type
653	TYPE(int_2d_8bit) :: building_type_f !< input variable for building type
654	TYPE(int_2d_8bit) :: pavement_type_f !< input variable for pavenment type
655	TYPE(int_2d_8bit) :: street_crossing_f !< input variable for water type
656	TYPE(int_2d_8bit) :: street_type_f !< input variable for water type
657	TYPE(int_2d_8bit) :: vegetation_type_f !< input variable for vegetation type
658	TYPE(int_2d_8bit) :: water_type_f !< input variable for water type
659	!
660	!-- Define 3D variables of type NC_BYTE
661	TYPE(int_3d_8bit) :: building_obstruction_f !< input variable for building obstruction
662	TYPE(int_3d_8bit) :: building_obstruction_full !< input variable for building obstruction
663	!
664	!-- Define 2D variables of type NC_INT
665	TYPE(int_2d_32bit) :: building_id_f !< input variable for building ID
666	!
667	!-- Define 2D variables of type NC_FLOAT
668	TYPE(real_2d) :: terrain_height_f !< input variable for terrain height
669	TYPE(real_2d) :: uvem_irradiance_f !< input variable for uvem irradiance lookup table
670	TYPE(real_2d) :: uvem_integration_f !< input variable for uvem integration
671	!
672	!-- Define 3D variables of type NC_FLOAT
673	TYPE(real_3d) :: basal_area_density_f !< input variable for basal area density - resolved vegetation
674	TYPE(real_3d) :: leaf_area_density_f !< input variable for leaf area density - resolved vegetation
675	TYPE(real_3d) :: root_area_density_lad_f !< input variable for root area density - resolved vegetation
676	TYPE(real_3d) :: root_area_density_lsm_f !< input variable for root area density - parametrized vegetation
677	TYPE(real_3d) :: uvem_radiance_f !< input variable for uvem radiance lookup table
678	TYPE(real_3d) :: uvem_projarea_f !< input variable for uvem projection area lookup table
679	!
680	!-- Define input variable for buildings
681	TYPE(build_in) :: buildings_f !< input variable for buildings
682	!
683	!-- Define input variables for soil_type
684	TYPE(soil_in) :: soil_type_f !< input variable for soil type
685
686	TYPE(fracs) :: surface_fraction_f !< input variable for surface fraction
687
688	TYPE(pars) :: albedo_pars_f !< input variable for albedo parameters
689	TYPE(pars) :: building_pars_f !< input variable for building parameters
690	TYPE(pars) :: pavement_pars_f !< input variable for pavement parameters
691	TYPE(pars) :: pavement_subsurface_pars_f !< input variable for pavement parameters
692	TYPE(pars) :: soil_pars_f !< input variable for soil parameters
693	TYPE(pars) :: vegetation_pars_f !< input variable for vegetation parameters
694	TYPE(pars) :: water_pars_f !< input variable for water parameters
695
696	TYPE(chem_emis_att_type) :: chem_emis_att !< Input Information of Chemistry Emission Data from netcdf
697	TYPE(chem_emis_val_type), ALLOCATABLE, DIMENSION(:) :: chem_emis !< Input Chemistry Emission Data from netcdf
698
699	CHARACTER(LEN=3) :: char_lod = 'lod' !< name of level-of-detail attribute in NetCDF file
700
701	CHARACTER(LEN=10) :: char_fill = '_FillValue' !< name of fill value attribute in NetCDF file
702
703	CHARACTER(LEN=100) :: input_file_static = 'PIDS_STATIC' !< Name of file which comprises static input data
704	CHARACTER(LEN=100) :: input_file_dynamic = 'PIDS_DYNAMIC' !< Name of file which comprises dynamic input data
705	CHARACTER(LEN=100) :: input_file_chem = 'PIDS_CHEM' !< Name of file which comprises chemistry input data
706	CHARACTER(LEN=100) :: input_file_uvem = 'PIDS_UVEM' !< Name of file which comprises static uv_exposure model input data
707	CHARACTER(LEN=100) :: input_file_vm = 'PIDS_VM' !< Name of file which comprises virtual measurement data
708
709	CHARACTER (LEN=25), ALLOCATABLE, DIMENSION(:) :: string_values !< output of string variables read from netcdf input files
710
711	INTEGER(iwp) :: id_emis !< NetCDF id of input file for chemistry emissions: TBD: It has to be removed
712
713	INTEGER(iwp) :: nc_stat !< return value of nf90 function call
714
715	LOGICAL :: input_pids_static = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing static information exists
716	LOGICAL :: input_pids_dynamic = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing dynamic information exists
717	LOGICAL :: input_pids_chem = .FALSE. !< Flag indicating whether Palm-input-data-standard file containing chemistry information exists
718	LOGICAL :: input_pids_uvem = .FALSE. !< Flag indicating whether uv-expoure-model input file containing static information exists
719	LOGICAL :: input_pids_vm = .FALSE. !< Flag indicating whether input file for virtual measurements exist
720
721	LOGICAL :: collective_read = .FALSE. !< Enable NetCDF collective read
722
723	TYPE(global_atts_type) :: input_file_atts !< global attributes of input file
724
725	SAVE
726
727	PRIVATE
728
729	INTERFACE netcdf_data_input_interpolate
730	MODULE PROCEDURE netcdf_data_input_interpolate_1d
731	MODULE PROCEDURE netcdf_data_input_interpolate_1d_soil
732	MODULE PROCEDURE netcdf_data_input_interpolate_2d
733	MODULE PROCEDURE netcdf_data_input_interpolate_3d
734	END INTERFACE netcdf_data_input_interpolate
735
736	INTERFACE netcdf_data_input_check_dynamic
737	MODULE PROCEDURE netcdf_data_input_check_dynamic
738	END INTERFACE netcdf_data_input_check_dynamic
739
740	INTERFACE netcdf_data_input_check_static
741	MODULE PROCEDURE netcdf_data_input_check_static
742	END INTERFACE netcdf_data_input_check_static
743
744	INTERFACE netcdf_data_input_chemistry_data
745	MODULE PROCEDURE netcdf_data_input_chemistry_data
746	END INTERFACE netcdf_data_input_chemistry_data
747
748	INTERFACE netcdf_data_input_get_dimension_length
749	MODULE PROCEDURE netcdf_data_input_get_dimension_length
750	END INTERFACE netcdf_data_input_get_dimension_length
751
752	INTERFACE netcdf_data_input_inquire_file
753	MODULE PROCEDURE netcdf_data_input_inquire_file
754	END INTERFACE netcdf_data_input_inquire_file
755
756	INTERFACE netcdf_data_input_init
757	MODULE PROCEDURE netcdf_data_input_init
758	END INTERFACE netcdf_data_input_init
759
760	INTERFACE netcdf_data_input_att
761	MODULE PROCEDURE netcdf_data_input_att_int
762	MODULE PROCEDURE netcdf_data_input_att_real
763	MODULE PROCEDURE netcdf_data_input_att_string
764	END INTERFACE netcdf_data_input_att
765
766	INTERFACE netcdf_data_input_init_3d
767	MODULE PROCEDURE netcdf_data_input_init_3d
768	END INTERFACE netcdf_data_input_init_3d
769
770	INTERFACE netcdf_data_input_init_lsm
771	MODULE PROCEDURE netcdf_data_input_init_lsm
772	END INTERFACE netcdf_data_input_init_lsm
773
774	INTERFACE netcdf_data_input_offline_nesting
775	MODULE PROCEDURE netcdf_data_input_offline_nesting
776	END INTERFACE netcdf_data_input_offline_nesting
777
778	INTERFACE netcdf_data_input_surface_data
779	MODULE PROCEDURE netcdf_data_input_surface_data
780	END INTERFACE netcdf_data_input_surface_data
781
782	INTERFACE netcdf_data_input_var
783	MODULE PROCEDURE netcdf_data_input_var_char
784	MODULE PROCEDURE netcdf_data_input_var_real_1d
785	MODULE PROCEDURE netcdf_data_input_var_real_2d
786	END INTERFACE netcdf_data_input_var
787
788	INTERFACE netcdf_data_input_uvem
789	MODULE PROCEDURE netcdf_data_input_uvem
790	END INTERFACE netcdf_data_input_uvem
791
792	INTERFACE get_variable
793	MODULE PROCEDURE get_variable_1d_char
794	MODULE PROCEDURE get_variable_1d_int
795	MODULE PROCEDURE get_variable_1d_real
796	MODULE PROCEDURE get_variable_2d_int8
797	MODULE PROCEDURE get_variable_2d_int32
798	MODULE PROCEDURE get_variable_2d_real
799	MODULE PROCEDURE get_variable_3d_int8
800	MODULE PROCEDURE get_variable_3d_real
801	MODULE PROCEDURE get_variable_3d_real_dynamic
802	MODULE PROCEDURE get_variable_4d_to_3d_real
803	MODULE PROCEDURE get_variable_4d_real
804	MODULE PROCEDURE get_variable_5d_to_4d_real
805	MODULE PROCEDURE get_variable_string
806	END INTERFACE get_variable
807
808	INTERFACE get_variable_pr
809	MODULE PROCEDURE get_variable_pr
810	END INTERFACE get_variable_pr
811
812	INTERFACE get_attribute
813	MODULE PROCEDURE get_attribute_real
814	MODULE PROCEDURE get_attribute_int8
815	MODULE PROCEDURE get_attribute_int32
816	MODULE PROCEDURE get_attribute_string
817	END INTERFACE get_attribute
818
819	!
820	!-- Public variables
821	PUBLIC albedo_pars_f, albedo_type_f, basal_area_density_f, buildings_f, &
822	building_id_f, building_pars_f, building_type_f, &
823	chem_emis, chem_emis_att, chem_emis_att_type, chem_emis_val_type, &
824	coord_ref_sys, &
825	init_3d, init_model, input_file_static, input_pids_static, &
826	input_pids_dynamic, input_pids_vm, input_file_vm, &
827	leaf_area_density_f, nest_offl, &
828	pavement_pars_f, pavement_subsurface_pars_f, pavement_type_f, &
829	root_area_density_lad_f, root_area_density_lsm_f, soil_pars_f, &
830	soil_type_f, street_crossing_f, street_type_f, surface_fraction_f, &
831	terrain_height_f, vegetation_pars_f, vegetation_type_f, &
832	water_pars_f, water_type_f
833	!
834	!-- Public uv exposure variables
835	PUBLIC building_obstruction_f, input_file_uvem, input_pids_uvem, &
836	netcdf_data_input_uvem, &
837	uvem_integration_f, uvem_irradiance_f, &
838	uvem_projarea_f, uvem_radiance_f
839
840	!
841	!-- Public subroutines
842	PUBLIC netcdf_data_input_check_dynamic, netcdf_data_input_check_static, &
843	netcdf_data_input_chemistry_data, &
844	netcdf_data_input_get_dimension_length, &
845	netcdf_data_input_inquire_file, &
846	netcdf_data_input_init, netcdf_data_input_init_lsm, &
847	netcdf_data_input_init_3d, netcdf_data_input_att, &
848	netcdf_data_input_interpolate, netcdf_data_input_offline_nesting, &
849	netcdf_data_input_surface_data, netcdf_data_input_topo, &
850	netcdf_data_input_var, get_attribute, get_variable, open_read_file
851
852
853	CONTAINS
854
855	!------------------------------------------------------------------------------!
856	! Description:
857	! ------------
858	!> Inquires whether NetCDF input files according to Palm-input-data standard
859	!> exist. Moreover, basic checks are performed.
860	!------------------------------------------------------------------------------!
861	SUBROUTINE netcdf_data_input_inquire_file
862
863	USE control_parameters, &
864	ONLY: topo_no_distinct
865
866	IMPLICIT NONE
867
868	#if defined ( __netcdf )
869	INQUIRE( FILE = TRIM( input_file_static ) // TRIM( coupling_char ), &
870	EXIST = input_pids_static )
871	INQUIRE( FILE = TRIM( input_file_dynamic ) // TRIM( coupling_char ), &
872	EXIST = input_pids_dynamic )
873	INQUIRE( FILE = TRIM( input_file_chem ) // TRIM( coupling_char ), &
874	EXIST = input_pids_chem )
875	INQUIRE( FILE = TRIM( input_file_uvem ) // TRIM( coupling_char ), &
876	EXIST = input_pids_uvem )
877	INQUIRE( FILE = TRIM( input_file_vm ) // TRIM( coupling_char ), &
878	EXIST = input_pids_vm )
879	#endif
880
881	!
882	!-- As long as topography can be input via ASCII format, no distinction
883	!-- between building and terrain can be made. This case, classify all
884	!-- surfaces as default type. Same in case land-surface and urban-surface
885	!-- model are not applied.
886	IF ( .NOT. input_pids_static ) THEN
887	topo_no_distinct = .TRUE.
888	ENDIF
889
890	END SUBROUTINE netcdf_data_input_inquire_file
891
892	!------------------------------------------------------------------------------!
893	! Description:
894	! ------------
895	!> Reads global attributes and coordinate reference system required for
896	!> initialization of the model.
897	!------------------------------------------------------------------------------!
898	SUBROUTINE netcdf_data_input_init
899
900	IMPLICIT NONE
901
902	INTEGER(iwp) :: id_mod !< NetCDF id of input file
903	INTEGER(iwp) :: var_id_crs !< NetCDF id of variable crs
904
905	IF ( .NOT. input_pids_static ) RETURN
906
907	#if defined ( __netcdf )
908	!
909	!-- Open file in read-only mode
910	CALL open_read_file( TRIM( input_file_static ) // &
911	TRIM( coupling_char ), id_mod )
912	!
913	!-- Read global attributes
914	CALL get_attribute( id_mod, input_file_atts%origin_lat_char, &
915	input_file_atts%origin_lat, .TRUE. )
916
917	CALL get_attribute( id_mod, input_file_atts%origin_lon_char, &
918	input_file_atts%origin_lon, .TRUE. )
919
920	CALL get_attribute( id_mod, input_file_atts%origin_time_char, &
921	input_file_atts%origin_time, .TRUE. )
922
923	CALL get_attribute( id_mod, input_file_atts%origin_x_char, &
924	input_file_atts%origin_x, .TRUE. )
925
926	CALL get_attribute( id_mod, input_file_atts%origin_y_char, &
927	input_file_atts%origin_y, .TRUE. )
928
929	CALL get_attribute( id_mod, input_file_atts%origin_z_char, &
930	input_file_atts%origin_z, .TRUE. )
931
932	CALL get_attribute( id_mod, input_file_atts%rotation_angle_char, &
933	input_file_atts%rotation_angle, .TRUE. )
934	!
935	!-- Read coordinate reference system if available
936	nc_stat = NF90_INQ_VARID( id_mod, 'crs', var_id_crs )
937	IF ( nc_stat == NF90_NOERR ) THEN
938	CALL get_attribute( id_mod, 'epsg_code', &
939	coord_ref_sys%epsg_code, &
940	.FALSE., 'crs' )
941	CALL get_attribute( id_mod, 'false_easting', &
942	coord_ref_sys%false_easting, &
943	.FALSE., 'crs' )
944	CALL get_attribute( id_mod, 'false_northing', &
945	coord_ref_sys%false_northing, &
946	.FALSE., 'crs' )
947	CALL get_attribute( id_mod, 'grid_mapping_name', &
948	coord_ref_sys%grid_mapping_name, &
949	.FALSE., 'crs' )
950	CALL get_attribute( id_mod, 'inverse_flattening', &
951	coord_ref_sys%inverse_flattening, &
952	.FALSE., 'crs' )
953	CALL get_attribute( id_mod, 'latitude_of_projection_origin', &
954	coord_ref_sys%latitude_of_projection_origin, &
955	.FALSE., 'crs' )
956	CALL get_attribute( id_mod, 'long_name', &
957	coord_ref_sys%long_name, &
958	.FALSE., 'crs' )
959	CALL get_attribute( id_mod, 'longitude_of_central_meridian', &
960	coord_ref_sys%longitude_of_central_meridian, &
961	.FALSE., 'crs' )
962	CALL get_attribute( id_mod, 'longitude_of_prime_meridian', &
963	coord_ref_sys%longitude_of_prime_meridian, &
964	.FALSE., 'crs' )
965	CALL get_attribute( id_mod, 'scale_factor_at_central_meridian', &
966	coord_ref_sys%scale_factor_at_central_meridian, &
967	.FALSE., 'crs' )
968	CALL get_attribute( id_mod, 'semi_major_axis', &
969	coord_ref_sys%semi_major_axis, &
970	.FALSE., 'crs' )
971	CALL get_attribute( id_mod, 'units', &
972	coord_ref_sys%units, &
973	.FALSE., 'crs' )
974	ELSE
975	!
976	!-- Calculate central meridian from origin_lon
977	coord_ref_sys%longitude_of_central_meridian = &
978	CEILING( input_file_atts%origin_lon / 6.0_wp ) * 6.0_wp - 3.0_wp
979	ENDIF
980	!
981	!-- Finally, close input file
982	CALL close_input_file( id_mod )
983	#endif
984	!
985	!-- Copy latitude, longitude, origin_z, rotation angle on init type
986	init_model%latitude = input_file_atts%origin_lat
987	init_model%longitude = input_file_atts%origin_lon
988	init_model%origin_time = input_file_atts%origin_time
989	init_model%origin_x = input_file_atts%origin_x
990	init_model%origin_y = input_file_atts%origin_y
991	init_model%origin_z = input_file_atts%origin_z
992	init_model%rotation_angle = input_file_atts%rotation_angle
993
994	!
995	!-- In case of nested runs, each model domain might have different longitude
996	!-- and latitude, which would result in different Coriolis parameters and
997	!-- sun-zenith angles. To avoid this, longitude and latitude in each model
998	!-- domain will be set to the values of the root model. Please note, this
999	!-- synchronization is required already here.
1000	#if defined( __parallel )
1001	CALL MPI_BCAST( init_model%latitude, 1, MPI_REAL, 0, &
1002	MPI_COMM_WORLD, ierr )
1003	CALL MPI_BCAST( init_model%longitude, 1, MPI_REAL, 0, &
1004	MPI_COMM_WORLD, ierr )
1005	#endif
1006
1007	END SUBROUTINE netcdf_data_input_init
1008
1009	!------------------------------------------------------------------------------!
1010	! Description:
1011	! ------------
1012	!> Read an array of characters.
1013	!------------------------------------------------------------------------------!
1014	SUBROUTINE netcdf_data_input_var_char( val, search_string, id_mod )
1015
1016	IMPLICIT NONE
1017
1018	CHARACTER(LEN=*) :: search_string !< name of the variable
1019	CHARACTER(LEN=*), DIMENSION(:) :: val !< variable which should be read
1020
1021	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1022
1023	#if defined ( __netcdf )
1024	!
1025	!-- Read variable
1026	CALL get_variable( id_mod, search_string, val )
1027	#endif
1028
1029	END SUBROUTINE netcdf_data_input_var_char
1030
1031	!------------------------------------------------------------------------------!
1032	! Description:
1033	! ------------
1034	!> Read an 1D array of REAL values.
1035	!------------------------------------------------------------------------------!
1036	SUBROUTINE netcdf_data_input_var_real_1d( val, search_string, id_mod )
1037
1038	IMPLICIT NONE
1039
1040	CHARACTER(LEN=*) :: search_string !< name of the variable
1041
1042	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1043
1044	REAL(wp), DIMENSION(:) :: val !< variable which should be read
1045
1046	#if defined ( __netcdf )
1047	!
1048	!-- Read variable
1049	CALL get_variable( id_mod, search_string, val )
1050	#endif
1051
1052	END SUBROUTINE netcdf_data_input_var_real_1d
1053
1054	!------------------------------------------------------------------------------!
1055	! Description:
1056	! ------------
1057	!> Read an 1D array of REAL values.
1058	!------------------------------------------------------------------------------!
1059	SUBROUTINE netcdf_data_input_var_real_2d( val, search_string, &
1060	id_mod, d1s, d1e, d2s, d2e )
1061
1062	IMPLICIT NONE
1063
1064	CHARACTER(LEN=*) :: search_string !< name of the variable
1065
1066	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1067	INTEGER(iwp) :: d1e !< end index of first dimension to be read
1068	INTEGER(iwp) :: d2e !< end index of second dimension to be read
1069	INTEGER(iwp) :: d1s !< start index of first dimension to be read
1070	INTEGER(iwp) :: d2s !< start index of second dimension to be read
1071
1072	REAL(wp), DIMENSION(:,:) :: val !< variable which should be read
1073
1074	#if defined ( __netcdf )
1075	!
1076	!-- Read character variable
1077	CALL get_variable( id_mod, search_string, val, d1s, d1e, d2s, d2e )
1078	#endif
1079
1080	END SUBROUTINE netcdf_data_input_var_real_2d
1081
1082	!------------------------------------------------------------------------------!
1083	! Description:
1084	! ------------
1085	!> Read a global string attribute
1086	!------------------------------------------------------------------------------!
1087	SUBROUTINE netcdf_data_input_att_string( val, search_string, id_mod, &
1088	input_file, global, openclose, &
1089	variable_name )
1090
1091	IMPLICIT NONE
1092
1093	CHARACTER(LEN=*) :: search_string !< name of the attribue
1094	CHARACTER(LEN=*) :: val !< attribute
1095
1096	CHARACTER(LEN=*) :: input_file !< name of input file
1097	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1098	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1099
1100	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1101
1102	LOGICAL :: global !< flag indicating a global or a variable's attribute
1103
1104	#if defined ( __netcdf )
1105	!
1106	!-- Open file in read-only mode if necessary
1107	IF ( openclose == 'open' ) THEN
1108	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1109	id_mod )
1110	ENDIF
1111	!
1112	!-- Read global attribute
1113	IF ( global ) THEN
1114	CALL get_attribute( id_mod, search_string, val, global )
1115	!
1116	!-- Read variable attribute
1117	ELSE
1118	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1119	ENDIF
1120	!
1121	!-- Close input file
1122	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1123	#endif
1124
1125	END SUBROUTINE netcdf_data_input_att_string
1126
1127	!------------------------------------------------------------------------------!
1128	! Description:
1129	! ------------
1130	!> Read a global integer attribute
1131	!------------------------------------------------------------------------------!
1132	SUBROUTINE netcdf_data_input_att_int( val, search_string, id_mod, &
1133	input_file, global, openclose, &
1134	variable_name )
1135
1136	IMPLICIT NONE
1137
1138	CHARACTER(LEN=*) :: search_string !< name of the attribue
1139
1140	CHARACTER(LEN=*) :: input_file !< name of input file
1141	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1142	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1143
1144	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1145	INTEGER(iwp) :: val !< value of the attribute
1146
1147	LOGICAL :: global !< flag indicating a global or a variable's attribute
1148
1149	#if defined ( __netcdf )
1150	!
1151	!-- Open file in read-only mode
1152	IF ( openclose == 'open' ) THEN
1153	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1154	id_mod )
1155	ENDIF
1156	!
1157	!-- Read global attribute
1158	IF ( global ) THEN
1159	CALL get_attribute( id_mod, search_string, val, global )
1160	!
1161	!-- Read variable attribute
1162	ELSE
1163	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1164	ENDIF
1165	!
1166	!-- Finally, close input file
1167	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1168	#endif
1169
1170	END SUBROUTINE netcdf_data_input_att_int
1171
1172	!------------------------------------------------------------------------------!
1173	! Description:
1174	! ------------
1175	!> Read a global real attribute
1176	!------------------------------------------------------------------------------!
1177	SUBROUTINE netcdf_data_input_att_real( val, search_string, id_mod, &
1178	input_file, global, openclose, &
1179	variable_name )
1180
1181	IMPLICIT NONE
1182
1183	CHARACTER(LEN=*) :: search_string !< name of the attribue
1184
1185	CHARACTER(LEN=*) :: input_file !< name of input file
1186	CHARACTER(LEN=*) :: openclose !< string indicating whether NetCDF needs to be opend or closed
1187	CHARACTER(LEN=*) :: variable_name !< string indicating whether NetCDF needs to be opend or closed
1188
1189	INTEGER(iwp) :: id_mod !< NetCDF id of input file
1190
1191	LOGICAL :: global !< flag indicating a global or a variable's attribute
1192
1193	REAL(wp) :: val !< value of the attribute
1194
1195	#if defined ( __netcdf )
1196	!
1197	!-- Open file in read-only mode
1198	IF ( openclose == 'open' ) THEN
1199	CALL open_read_file( TRIM( input_file ) // TRIM( coupling_char ), &
1200	id_mod )
1201	ENDIF
1202	!
1203	!-- Read global attribute
1204	IF ( global ) THEN
1205	CALL get_attribute( id_mod, search_string, val, global )
1206	!
1207	!-- Read variable attribute
1208	ELSE
1209	CALL get_attribute( id_mod, search_string, val, global, variable_name )
1210	ENDIF
1211	!
1212	!-- Finally, close input file
1213	IF ( openclose == 'close' ) CALL close_input_file( id_mod )
1214	#endif
1215
1216	END SUBROUTINE netcdf_data_input_att_real
1217
1218	!------------------------------------------------------------------------------!
1219	! Description:
1220	! ------------
1221	!> Reads Chemistry NETCDF Input data, such as emission values, emission species, etc. .
1222	!------------------------------------------------------------------------------!
1223	SUBROUTINE netcdf_data_input_chemistry_data(emt_att,emt)
1224
1225	USE chem_modules, &
1226	ONLY: do_emis, mode_emis, time_fac_type, &
1227	surface_csflux_name
1228
1229	USE control_parameters, &
1230	ONLY: message_string
1231
1232	USE indices, &
1233	ONLY: nz, nx, ny, nxl, nxr, nys, nyn, nzb, nzt
1234
1235	IMPLICIT NONE
1236
1237	TYPE(chem_emis_att_type), INTENT(INOUT) :: emt_att
1238	TYPE(chem_emis_val_type), ALLOCATABLE, DIMENSION(:), INTENT(INOUT) :: emt
1239
1240	CHARACTER (LEN=80) :: units='' !< units of chemistry inputs
1241
1242	INTEGER(iwp) :: ispec !< index for number of emission species in input
1243
1244	INTEGER(iwp), ALLOCATABLE, DIMENSION(:) :: dum_var !< value of variable read from netcdf input
1245	INTEGER(iwp) :: errno !< error number NF90_???? function
1246	INTEGER(iwp) :: id_var !< variable id
1247	! INTEGER(iwp) :: id_emis !< NetCDF id of input file
1248	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
1249	INTEGER(iwp) :: len_dims,len_dims_2 !< Length of dimensions
1250
1251	INTEGER(iwp) :: max_string_length=25 !< Variable for the maximum length of a string
1252
1253	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< Name of Variables
1254
1255	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:) :: dum_var_3d !< variable for storing temporary data of 3-dimensional
1256	! variables read from netcdf for chemistry emissions
1257
1258	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: dum_var_4d !< variable for storing temporary data of 5-dimensional
1259	!< variables read from netcdf for chemistry emissions
1260	!--
1261	!> Start the processing of the data
1262	CALL location_message( 'starting allocation of chemistry emissions arrays', .FALSE. )
1263
1264	!> Parameterized mode of the emissions
1265	IF (TRIM(mode_emis)=="PARAMETERIZED" .OR. TRIM(mode_emis)=="parameterized") THEN
1266
1267	ispec=1
1268	emt_att%nspec=0
1269
1270	!number of species
1271	DO WHILE (TRIM( surface_csflux_name( ispec ) ) /= 'novalue' )
1272
1273	emt_att%nspec=emt_att%nspec+1
1274	ispec=ispec+1
1275
1276	ENDDO
1277
1278	!-- allocate emission values data type arrays
1279	ALLOCATE(emt(emt_att%nspec))
1280
1281	!-- Read EMISSION SPECIES NAMES
1282
1283	!Assign values
1284	ALLOCATE(emt_att%species_name(emt_att%nspec))
1285
1286	DO ispec=1,emt_att%nspec
1287	emt_att%species_name(ispec) = TRIM(surface_csflux_name(ispec))
1288	ENDDO
1289
1290
1291	!> DEFAULT AND PRE-PROCESSED MODE
1292	ELSE
1293
1294	#if defined ( __netcdf )
1295	IF ( .NOT. input_pids_chem ) RETURN
1296
1297	!-- Open file in read-only mode
1298	CALL open_read_file( TRIM( input_file_chem ) // &
1299	TRIM( coupling_char ), id_emis )
1300	!-- inquire number of variables
1301	CALL inquire_num_variables( id_emis, num_vars )
1302
1303	!-- Get General Dimension Lengths: only number of species and number of categories.
1304	! the other dimensions depend on the mode of the emissions or on the presence of specific components
1305	!nspecies
1306	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nspec, 'nspecies' )
1307
1308
1309	!-- Allocate emission values data type arrays
1310	ALLOCATE(emt(1:emt_att%nspec))
1311
1312
1313	!-- Read EMISSION SPECIES NAMES
1314	!Allocate Arrays
1315	ALLOCATE(emt_att%species_name(emt_att%nspec))
1316
1317	!Call get Variable
1318	CALL get_variable( id_emis, 'emission_name', string_values, emt_att%nspec )
1319	emt_att%species_name=string_values
1320	! If allocated, Deallocate var_string, an array only used for reading-in strings
1321	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1322
1323	!-- Read EMISSION SPECIES INDEX
1324	!Allocate Arrays
1325	ALLOCATE(emt_att%species_index(emt_att%nspec))
1326	!Call get Variable
1327	CALL get_variable( id_emis, 'emission_index', emt_att%species_index )
1328
1329
1330	!-- Now the routine has to distinguish between DEFAULT and PRE-PROCESSED chemistry emission modes
1331
1332	IF (TRIM(mode_emis)=="DEFAULT" .OR. TRIM(mode_emis)=="default") THEN
1333
1334	!number of categories
1335	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%ncat, 'ncat' )
1336
1337	!-- Read EMISSION CATEGORIES INDEX
1338	!Allocate Arrays
1339	ALLOCATE(emt_att%cat_index(emt_att%ncat))
1340	!Call get Variable
1341	CALL get_variable( id_emis, 'emission_cat_index', emt_att%cat_index )
1342
1343
1344	DO ispec=1,emt_att%nspec
1345	!-- EMISSION_VOC_NAME (1-DIMENSIONAL)
1346	IF (TRIM(emt_att%species_name(ispec))=="VOC" .OR. TRIM(emt_att%species_name(ispec))=="voc") THEN
1347	!Allocate Array
1348	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nvoc, 'nvoc' )
1349	ALLOCATE(emt_att%voc_name(1:emt_att%nvoc))
1350	!Read-in Variable
1351	CALL get_variable( id_emis,"emission_voc_name",string_values, emt_att%nvoc)
1352	emt_att%voc_name=string_values
1353	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1354
1355	!-- COMPOSITION VOC (2-DIMENSIONAL)
1356	!Allocate Array
1357	ALLOCATE(emt_att%voc_comp(1:emt_att%ncat,1:emt_att%nvoc))
1358	!Read-in Variable
1359	! CALL get_variable(id_emis,"composition_voc",emt%voc_comp,1,1,emt%ncat,emt%nvoc)
1360	CALL get_variable(id_emis,"composition_voc",emt_att%voc_comp,1,emt_att%ncat,1,emt_att%nvoc)
1361	ENDIF
1362
1363	!-- EMISSION_PM_NAME (1-DIMENSIONAL)
1364	IF (TRIM(emt_att%species_name(ispec))=="PM" .OR. TRIM(emt_att%species_name(ispec))=="pm") THEN
1365	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%npm, 'npm' )
1366	ALLOCATE(emt_att%pm_name(1:emt_att%npm))
1367	!Read-in Variable
1368	CALL get_variable( id_emis,"pm_name",string_values, emt_att%npm)
1369	emt_att%pm_name=string_values
1370	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1371
1372	!-- COMPOSITION PM (3-DIMENSIONAL)
1373	!Allocate
1374	len_dims=3 !> number of PMs: PM1, PM2.5 and PM10
1375	ALLOCATE(emt_att%pm_comp(1:emt_att%ncat,1:emt_att%npm,1:len_dims))
1376	!Read-in Variable
1377	CALL get_variable(id_emis,"composition_pm",emt_att%pm_comp,1,emt_att%ncat,1,emt_att%npm,1,len_dims)
1378	ENDIF
1379
1380	!-- COMPOSITION_NOX (2-DIMENSIONAL)
1381	IF (TRIM(emt_att%species_name(ispec))=="NOx" .OR. TRIM(emt_att%species_name(ispec))=="nox") THEN
1382	!Allocate array
1383	ALLOCATE(emt_att%nox_comp(1:emt_att%ncat,1:emt_att%nnox))
1384	!Read-in Variable
1385	CALL get_variable(id_emis,"composition_nox",emt_att%nox_comp,1,emt_att%ncat,1,emt_att%nnox)
1386	ENDIF
1387
1388	!-- COMPOSITION-SOX (2-DIMENSIONAL)
1389	IF (TRIM(emt_att%species_name(ispec))=="SOx" .OR. TRIM(emt_att%species_name(ispec))=="sox") THEN
1390	ALLOCATE(emt_att%sox_comp(1:emt_att%ncat,1:emt_att%nsox))
1391	!Read-in Variable
1392	CALL get_variable(id_emis,"composition_sox",emt_att%sox_comp,1,emt_att%ncat,1,emt_att%nsox)
1393	ENDIF
1394	ENDDO !>ispec
1395
1396	!-- For reading the emission time factors, the distinction between HOUR and MDH data is necessary
1397
1398	!-- EMISSION_TIME_SCALING_FACTORS
1399	!-- HOUR
1400	IF (TRIM(time_fac_type)=="HOUR" .OR. TRIM(time_fac_type)=="hour") THEN
1401	!-- Allocate Array
1402	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nhoursyear, 'nhoursyear' )
1403	ALLOCATE(emt_att%hourly_emis_time_factor(1:emt_att%ncat,1:emt_att%nhoursyear))
1404	!Read-in Variable
1405	CALL get_variable(id_emis,"emission_time_factors",emt_att%hourly_emis_time_factor,1, &
1406	emt_att%ncat,1,emt_att%nhoursyear)
1407
1408	!-- MDH
1409	ELSE IF (TRIM(time_fac_type) == "MDH" .OR. TRIM(time_fac_type) == "mdh") THEN
1410	!-- Allocate Array
1411	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nmonthdayhour, 'nmonthdayhour' )
1412	ALLOCATE(emt_att%mdh_emis_time_factor(1:emt_att%ncat,1:emt_att%nmonthdayhour))
1413	!-- Read-in Variable
1414	CALL get_variable(id_emis,"emission_time_factors",emt_att%mdh_emis_time_factor,1, &
1415	emt_att%ncat,1,emt_att%nmonthdayhour)
1416
1417	ELSE
1418
1419	message_string = 'We are in the DEFAULT chemistry emissions mode: ' // &
1420	' !no time-factor type specified!' // &
1421	'Please, specify the value of time_fac_type:' // &
1422	' either "MDH" or "HOUR"'
1423	CALL message( 'netcdf_data_input_chemistry_data', 'CM0200', 2, 2, 0, 6, 0 )
1424
1425
1426	ENDIF
1427
1428	!-- Finally read-in the emission values and their units (DEFAULT mode)
1429
1430	DO ispec=1,emt_att%nspec
1431
1432	IF ( .NOT. ALLOCATED( emt(ispec)%default_emission_data ) ) &
1433	ALLOCATE(emt(ispec)%default_emission_data(1:emt_att%ncat,1:ny+1,1:nx+1))
1434
1435	ALLOCATE(dum_var_3d(1:emt_att%ncat,nys+1:nyn+1,nxl+1:nxr+1))
1436
1437	CALL get_variable(id_emis,"emission_values",dum_var_3d,ispec,1,emt_att%ncat,nys,nyn,nxl,nxr)
1438
1439	emt(ispec)%default_emission_data(:,nys+1:nyn+1,nxl+1:nxr+1) = &
1440	dum_var_3d(1:emt_att%ncat,nys+1:nyn+1,nxl+1:nxr+1)
1441
1442	DEALLOCATE (dum_var_3d)
1443
1444	ENDDO
1445
1446	!-- UNITS
1447	CALL get_attribute(id_emis,"units",emt_att%units,.FALSE.,"emission_values")
1448
1449
1450	!-- PRE-PROCESSED MODE --
1451
1452	ELSE IF (TRIM(mode_emis)=="PRE-PROCESSED" .OR. TRIM(mode_emis)=="pre-processed") THEN
1453	!-- In the PRE-PROCESSED mode, only the VOC names, the VOC_composition, the emission values and their units remain to be read at this point
1454
1455	DO ispec=1,emt_att%nspec
1456
1457	!-- EMISSION_VOC_NAME (1-DIMENSIONAL)
1458	IF (TRIM(emt_att%species_name(ispec))=="VOC" .OR. TRIM(emt_att%species_name(ispec))=="voc") THEN
1459	!Allocate Array
1460	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%nvoc, 'nvoc' )
1461	ALLOCATE(emt_att%voc_name(1:emt_att%nvoc))
1462	!Read-in Variable
1463	CALL get_variable( id_emis,"emission_voc_name",string_values, emt_att%nvoc)
1464	emt_att%voc_name=string_values
1465	IF (ALLOCATED(string_values)) DEALLOCATE(string_values)
1466
1467	!-- COMPOSITION VOC (2-DIMENSIONAL)
1468	!Allocate Array
1469	ALLOCATE(emt_att%voc_comp(1:emt_att%ncat,1:emt_att%nvoc))
1470	!Read-in Variable
1471	CALL get_variable(id_emis,"composition_voc",emt_att%voc_comp,1,emt_att%ncat,1,emt_att%nvoc)
1472	ENDIF
1473
1474	ENDDO !> ispec
1475
1476	!-- EMISSION_VALUES (4-DIMENSIONAL)
1477	!Calculate temporal dimension length
1478	CALL netcdf_data_input_get_dimension_length( id_emis, emt_att%dt_emission, 'time' )
1479
1480
1481	DO ispec=1,emt_att%nspec
1482
1483	!Allocation for the entire domain has to be done only for the first processor between all the subdomains
1484	IF ( .NOT. ALLOCATED( emt(ispec)%preproc_emission_data ) ) &
1485	ALLOCATE(emt(ispec)%preproc_emission_data(emt_att%dt_emission,1,1:ny+1,1:nx+1))
1486
1487	!> allocate variable where to pass emission values read from netcdf
1488	ALLOCATE(dum_var_4d(1:emt_att%dt_emission,1,nys+1:nyn+1,nxl+1:nxr+1))
1489
1490	!Read-in Variable
1491	CALL get_variable(id_emis,"emission_values",dum_var_4d,ispec,1,emt_att%dt_emission,1,1,nys,nyn,nxl,nxr)
1492
1493
1494	emt(ispec)%preproc_emission_data(:,1,nys+1:nyn+1,nxl+1:nxr+1) = &
1495	dum_var_4d(1:emt_att%dt_emission,1,nys+1:nyn+1,nxl+1:nxr+1)
1496
1497	DEALLOCATE ( dum_var_4d )
1498
1499	ENDDO
1500
1501	!-- UNITS
1502	CALL get_attribute(id_emis,"units",emt_att%units,.FALSE.,"emission_values")
1503
1504	ENDIF
1505
1506	CALL close_input_file( id_emis )
1507
1508	#endif
1509	ENDIF
1510
1511	END SUBROUTINE netcdf_data_input_chemistry_data
1512
1513	!------------------------------------------------------------------------------!
1514	! Description:
1515	! ------------
1516	!> Reads surface classification data, such as vegetation and soil type, etc. .
1517	!------------------------------------------------------------------------------!
1518	SUBROUTINE netcdf_data_input_surface_data
1519
1520	USE control_parameters, &
1521	ONLY: bc_lr_cyc, bc_ns_cyc, land_surface, plant_canopy, &
1522	urban_surface
1523
1524	USE indices, &
1525	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg
1526
1527
1528	IMPLICIT NONE
1529
1530	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
1531
1532	INTEGER(iwp) :: id_surf !< NetCDF id of input file
1533	INTEGER(iwp) :: k !< running index along z-direction
1534	INTEGER(iwp) :: k2 !< running index
1535	INTEGER(iwp) :: num_vars !< number of variables in input file
1536	INTEGER(iwp) :: nz_soil !< number of soil layers in file
1537
1538	INTEGER(iwp), DIMENSION(nysg:nyng,nxlg:nxrg) :: var_exchange_int !< dummy variables used to exchange 32-bit Integer arrays
1539	INTEGER(iwp), DIMENSION(:,:,:), ALLOCATABLE :: var_dum_int_3d !< dummy variables used to exchange real arrays
1540
1541	REAL(wp), DIMENSION(nysg:nyng,nxlg:nxrg) :: var_exchange_real !< dummy variables used to exchange real arrays
1542
1543	REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: var_dum_real_3d !< dummy variables used to exchange real arrays
1544	REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: var_dum_real_4d !< dummy variables used to exchange real arrays
1545
1546	!
1547	!-- If not static input file is available, skip this routine
1548	IF ( .NOT. input_pids_static ) RETURN
1549	!
1550	!-- Measure CPU time
1551	CALL cpu_log( log_point_s(82), 'NetCDF input', 'start' )
1552	!
1553	!-- Read plant canopy variables.
1554	IF ( plant_canopy ) THEN
1555	#if defined ( __netcdf )
1556	!
1557	!-- Open file in read-only mode
1558	CALL open_read_file( TRIM( input_file_static ) // &
1559	TRIM( coupling_char ) , id_surf )
1560	!
1561	!-- At first, inquire all variable names.
1562	!-- This will be used to check whether an optional input variable
1563	!-- exist or not.
1564	CALL inquire_num_variables( id_surf, num_vars )
1565
1566	ALLOCATE( var_names(1:num_vars) )
1567	CALL inquire_variable_names( id_surf, var_names )
1568
1569	!
1570	!-- Read leaf area density - resolved vegetation
1571	IF ( check_existence( var_names, 'lad' ) ) THEN
1572	leaf_area_density_f%from_file = .TRUE.
1573	CALL get_attribute( id_surf, char_fill, &
1574	leaf_area_density_f%fill, &
1575	.FALSE., 'lad' )
1576	!
1577	!-- Inquire number of vertical vegetation layer
1578	CALL netcdf_data_input_get_dimension_length( id_surf, &
1579	leaf_area_density_f%nz, &
1580	'zlad' )
1581	!
1582	!-- Allocate variable for leaf-area density
1583	ALLOCATE( leaf_area_density_f%var( 0:leaf_area_density_f%nz-1, &
1584	nys:nyn,nxl:nxr) )
1585
1586	CALL get_variable( id_surf, 'lad', leaf_area_density_f%var, &
1587	nxl, nxr, nys, nyn, &
1588	0, leaf_area_density_f%nz-1 )
1589
1590	ELSE
1591	leaf_area_density_f%from_file = .FALSE.
1592	ENDIF
1593
1594	!
1595	!-- Read basal area density - resolved vegetation
1596	IF ( check_existence( var_names, 'bad' ) ) THEN
1597	basal_area_density_f%from_file = .TRUE.
1598	CALL get_attribute( id_surf, char_fill, &
1599	basal_area_density_f%fill, &
1600	.FALSE., 'bad' )
1601	!
1602	!-- Inquire number of vertical vegetation layer
1603	CALL netcdf_data_input_get_dimension_length( id_surf, &
1604	basal_area_density_f%nz, &
1605	'zlad' )
1606	!
1607	!-- Allocate variable
1608	ALLOCATE( basal_area_density_f%var(0:basal_area_density_f%nz-1, &
1609	nys:nyn,nxl:nxr) )
1610
1611	CALL get_variable( id_surf, 'bad', basal_area_density_f%var, &
1612	nxl, nxr, nys, nyn, &
1613	0, basal_area_density_f%nz-1 )
1614	ELSE
1615	basal_area_density_f%from_file = .FALSE.
1616	ENDIF
1617
1618	!
1619	!-- Read root area density - resolved vegetation
1620	IF ( check_existence( var_names, 'root_area_dens_r' ) ) THEN
1621	root_area_density_lad_f%from_file = .TRUE.
1622	CALL get_attribute( id_surf, char_fill, &
1623	root_area_density_lad_f%fill, &
1624	.FALSE., 'root_area_dens_r' )
1625	!
1626	!-- Inquire number of vertical soil layers
1627	CALL netcdf_data_input_get_dimension_length( id_surf, &
1628	root_area_density_lad_f%nz, &
1629	'zsoil' )
1630	!
1631	!-- Allocate variable
1632	ALLOCATE( root_area_density_lad_f%var &
1633	(0:root_area_density_lad_f%nz-1, &
1634	nys:nyn,nxl:nxr) )
1635
1636	CALL get_variable( id_surf, 'root_area_dens_r', &
1637	root_area_density_lad_f%var, &
1638	nxl, nxr, nys, nyn, &
1639	0, root_area_density_lad_f%nz-1 )
1640	ELSE
1641	root_area_density_lad_f%from_file = .FALSE.
1642	ENDIF
1643	!
1644	!-- Finally, close input file
1645	CALL close_input_file( id_surf )
1646	#endif
1647	ENDIF
1648	!
1649	!-- Deallocate variable list. Will be re-allocated in case further
1650	!-- variables are read from file.
1651	IF ( ALLOCATED( var_names ) ) DEALLOCATE( var_names )
1652	!
1653	!-- Skip the following if no land-surface or urban-surface module are
1654	!-- applied. This case, no one of the following variables is used anyway.
1655	IF ( .NOT. land_surface .AND. .NOT. urban_surface ) RETURN
1656	!
1657	!-- Initialize dummy arrays used for ghost-point exchange
1658	var_exchange_int = 0
1659	var_exchange_real = 0.0_wp
1660
1661	#if defined ( __netcdf )
1662	!
1663	!-- Open file in read-only mode
1664	CALL open_read_file( TRIM( input_file_static ) // &
1665	TRIM( coupling_char ) , id_surf )
1666	!
1667	!-- Inquire all variable names.
1668	!-- This will be used to check whether an optional input variable exist
1669	!-- or not.
1670	CALL inquire_num_variables( id_surf, num_vars )
1671
1672	ALLOCATE( var_names(1:num_vars) )
1673	CALL inquire_variable_names( id_surf, var_names )
1674	!
1675	!-- Read vegetation type and required attributes
1676	IF ( check_existence( var_names, 'vegetation_type' ) ) THEN
1677	vegetation_type_f%from_file = .TRUE.
1678	CALL get_attribute( id_surf, char_fill, &
1679	vegetation_type_f%fill, &
1680	.FALSE., 'vegetation_type' )
1681
1682	ALLOCATE ( vegetation_type_f%var(nys:nyn,nxl:nxr) )
1683
1684	CALL get_variable( id_surf, 'vegetation_type', &
1685	vegetation_type_f%var, nxl, nxr, nys, nyn )
1686	ELSE
1687	vegetation_type_f%from_file = .FALSE.
1688	ENDIF
1689
1690	!
1691	!-- Read soil type and required attributes
1692	IF ( check_existence( var_names, 'soil_type' ) ) THEN
1693	soil_type_f%from_file = .TRUE.
1694	!
1695	!-- Note, lod is currently not on file; skip for the moment
1696	! CALL get_attribute( id_surf, char_lod, &
1697	! soil_type_f%lod, &
1698	! .FALSE., 'soil_type' )
1699	CALL get_attribute( id_surf, char_fill, &
1700	soil_type_f%fill, &
1701	.FALSE., 'soil_type' )
1702
1703	IF ( soil_type_f%lod == 1 ) THEN
1704
1705	ALLOCATE ( soil_type_f%var_2d(nys:nyn,nxl:nxr) )
1706
1707	CALL get_variable( id_surf, 'soil_type', soil_type_f%var_2d, &
1708	nxl, nxr, nys, nyn )
1709
1710	ELSEIF ( soil_type_f%lod == 2 ) THEN
1711	!
1712	!-- Obtain number of soil layers from file.
1713	CALL netcdf_data_input_get_dimension_length( id_surf, nz_soil, &
1714	'zsoil' )
1715
1716	ALLOCATE ( soil_type_f%var_3d(0:nz_soil,nys:nyn,nxl:nxr) )
1717
1718	CALL get_variable( id_surf, 'soil_type', soil_type_f%var_3d, &
1719	nxl, nxr, nys, nyn, 0, nz_soil )
1720
1721	ENDIF
1722	ELSE
1723	soil_type_f%from_file = .FALSE.
1724	ENDIF
1725
1726	!
1727	!-- Read pavement type and required attributes
1728	IF ( check_existence( var_names, 'pavement_type' ) ) THEN
1729	pavement_type_f%from_file = .TRUE.
1730	CALL get_attribute( id_surf, char_fill, &
1731	pavement_type_f%fill, .FALSE., &
1732	'pavement_type' )
1733
1734	ALLOCATE ( pavement_type_f%var(nys:nyn,nxl:nxr) )
1735
1736	CALL get_variable( id_surf, 'pavement_type', pavement_type_f%var, &
1737	nxl, nxr, nys, nyn )
1738	ELSE
1739	pavement_type_f%from_file = .FALSE.
1740	ENDIF
1741
1742	!
1743	!-- Read water type and required attributes
1744	IF ( check_existence( var_names, 'water_type' ) ) THEN
1745	water_type_f%from_file = .TRUE.
1746	CALL get_attribute( id_surf, char_fill, water_type_f%fill, &
1747	.FALSE., 'water_type' )
1748
1749	ALLOCATE ( water_type_f%var(nys:nyn,nxl:nxr) )
1750
1751	CALL get_variable( id_surf, 'water_type', water_type_f%var, &
1752	nxl, nxr, nys, nyn )
1753
1754	ELSE
1755	water_type_f%from_file = .FALSE.
1756	ENDIF
1757	!
1758	!-- Read relative surface fractions of vegetation, pavement and water.
1759	IF ( check_existence( var_names, 'surface_fraction' ) ) THEN
1760	surface_fraction_f%from_file = .TRUE.
1761	CALL get_attribute( id_surf, char_fill, &
1762	surface_fraction_f%fill, &
1763	.FALSE., 'surface_fraction' )
1764	!
1765	!-- Inquire number of surface fractions
1766	CALL netcdf_data_input_get_dimension_length( id_surf, &
1767	surface_fraction_f%nf, &
1768	'nsurface_fraction' )
1769	!
1770	!-- Allocate dimension array and input array for surface fractions
1771	ALLOCATE( surface_fraction_f%nfracs(0:surface_fraction_f%nf-1) )
1772	ALLOCATE( surface_fraction_f%frac(0:surface_fraction_f%nf-1, &
1773	nys:nyn,nxl:nxr) )
1774	!
1775	!-- Get dimension of surface fractions
1776	CALL get_variable( id_surf, 'nsurface_fraction', &
1777	surface_fraction_f%nfracs )
1778	!
1779	!-- Read surface fractions
1780	CALL get_variable( id_surf, 'surface_fraction', &
1781	surface_fraction_f%frac, nxl, nxr, nys, nyn, &
1782	0, surface_fraction_f%nf-1 )
1783	ELSE
1784	surface_fraction_f%from_file = .FALSE.
1785	ENDIF
1786	!
1787	!-- Read building parameters and related information
1788	IF ( check_existence( var_names, 'building_pars' ) ) THEN
1789	building_pars_f%from_file = .TRUE.
1790	CALL get_attribute( id_surf, char_fill, &
1791	building_pars_f%fill, &
1792	.FALSE., 'building_pars' )
1793	!
1794	!-- Inquire number of building parameters
1795	CALL netcdf_data_input_get_dimension_length( id_surf, &
1796	building_pars_f%np, &
1797	'nbuilding_pars' )
1798	!
1799	!-- Allocate dimension array and input array for building parameters
1800	ALLOCATE( building_pars_f%pars(0:building_pars_f%np-1) )
1801	ALLOCATE( building_pars_f%pars_xy(0:building_pars_f%np-1, &
1802	nys:nyn,nxl:nxr) )
1803	!
1804	!-- Get dimension of building parameters
1805	CALL get_variable( id_surf, 'nbuilding_pars', &
1806	building_pars_f%pars )
1807	!
1808	!-- Read building_pars
1809	CALL get_variable( id_surf, 'building_pars', &
1810	building_pars_f%pars_xy, nxl, nxr, nys, nyn, &
1811	0, building_pars_f%np-1 )
1812	ELSE
1813	building_pars_f%from_file = .FALSE.
1814	ENDIF
1815
1816	!
1817	!-- Read albedo type and required attributes
1818	IF ( check_existence( var_names, 'albedo_type' ) ) THEN
1819	albedo_type_f%from_file = .TRUE.
1820	CALL get_attribute( id_surf, char_fill, albedo_type_f%fill, &
1821	.FALSE., 'albedo_type' )
1822
1823	ALLOCATE ( albedo_type_f%var(nys:nyn,nxl:nxr) )
1824
1825	CALL get_variable( id_surf, 'albedo_type', albedo_type_f%var, &
1826	nxl, nxr, nys, nyn )
1827	ELSE
1828	albedo_type_f%from_file = .FALSE.
1829	ENDIF
1830	!
1831	!-- Read albedo parameters and related information
1832	IF ( check_existence( var_names, 'albedo_pars' ) ) THEN
1833	albedo_pars_f%from_file = .TRUE.
1834	CALL get_attribute( id_surf, char_fill, albedo_pars_f%fill, &
1835	.FALSE., 'albedo_pars' )
1836	!
1837	!-- Inquire number of albedo parameters
1838	CALL netcdf_data_input_get_dimension_length( id_surf, &
1839	albedo_pars_f%np, &
1840	'nalbedo_pars' )
1841	!
1842	!-- Allocate dimension array and input array for albedo parameters
1843	ALLOCATE( albedo_pars_f%pars(0:albedo_pars_f%np-1) )
1844	ALLOCATE( albedo_pars_f%pars_xy(0:albedo_pars_f%np-1, &
1845	nys:nyn,nxl:nxr) )
1846	!
1847	!-- Get dimension of albedo parameters
1848	CALL get_variable( id_surf, 'nalbedo_pars', albedo_pars_f%pars )
1849
1850	CALL get_variable( id_surf, 'albedo_pars', albedo_pars_f%pars_xy, &
1851	nxl, nxr, nys, nyn, &
1852	0, albedo_pars_f%np-1 )
1853	ELSE
1854	albedo_pars_f%from_file = .FALSE.
1855	ENDIF
1856
1857	!
1858	!-- Read pavement parameters and related information
1859	IF ( check_existence( var_names, 'pavement_pars' ) ) THEN
1860	pavement_pars_f%from_file = .TRUE.
1861	CALL get_attribute( id_surf, char_fill, &
1862	pavement_pars_f%fill, &
1863	.FALSE., 'pavement_pars' )
1864	!
1865	!-- Inquire number of pavement parameters
1866	CALL netcdf_data_input_get_dimension_length( id_surf, &
1867	pavement_pars_f%np, &
1868	'npavement_pars' )
1869	!
1870	!-- Allocate dimension array and input array for pavement parameters
1871	ALLOCATE( pavement_pars_f%pars(0:pavement_pars_f%np-1) )
1872	ALLOCATE( pavement_pars_f%pars_xy(0:pavement_pars_f%np-1, &
1873	nys:nyn,nxl:nxr) )
1874	!
1875	!-- Get dimension of pavement parameters
1876	CALL get_variable( id_surf, 'npavement_pars', pavement_pars_f%pars )
1877
1878	CALL get_variable( id_surf, 'pavement_pars', pavement_pars_f%pars_xy,&
1879	nxl, nxr, nys, nyn, &
1880	0, pavement_pars_f%np-1 )
1881	ELSE
1882	pavement_pars_f%from_file = .FALSE.
1883	ENDIF
1884
1885	!
1886	!-- Read pavement subsurface parameters and related information
1887	IF ( check_existence( var_names, 'pavement_subsurface_pars' ) ) &
1888	THEN
1889	pavement_subsurface_pars_f%from_file = .TRUE.
1890	CALL get_attribute( id_surf, char_fill, &
1891	pavement_subsurface_pars_f%fill, &
1892	.FALSE., 'pavement_subsurface_pars' )
1893	!
1894	!-- Inquire number of parameters
1895	CALL netcdf_data_input_get_dimension_length( id_surf, &
1896	pavement_subsurface_pars_f%np, &
1897	'npavement_subsurface_pars' )
1898	!
1899	!-- Inquire number of soil layers
1900	CALL netcdf_data_input_get_dimension_length( id_surf, &
1901	pavement_subsurface_pars_f%nz, &
1902	'zsoil' )
1903	!
1904	!-- Allocate dimension array and input array for pavement parameters
1905	ALLOCATE( pavement_subsurface_pars_f%pars &
1906	(0:pavement_subsurface_pars_f%np-1) )
1907	ALLOCATE( pavement_subsurface_pars_f%pars_xyz &
1908	(0:pavement_subsurface_pars_f%np-1, &
1909	0:pavement_subsurface_pars_f%nz-1, &
1910	nys:nyn,nxl:nxr) )
1911	!
1912	!-- Get dimension of pavement parameters
1913	CALL get_variable( id_surf, 'npavement_subsurface_pars', &
1914	pavement_subsurface_pars_f%pars )
1915
1916	CALL get_variable( id_surf, 'pavement_subsurface_pars', &
1917	pavement_subsurface_pars_f%pars_xyz, &
1918	nxl, nxr, nys, nyn, &
1919	0, pavement_subsurface_pars_f%nz-1, &
1920	0, pavement_subsurface_pars_f%np-1 )
1921	ELSE
1922	pavement_subsurface_pars_f%from_file = .FALSE.
1923	ENDIF
1924
1925
1926	!
1927	!-- Read vegetation parameters and related information
1928	IF ( check_existence( var_names, 'vegetation_pars' ) ) THEN
1929	vegetation_pars_f%from_file = .TRUE.
1930	CALL get_attribute( id_surf, char_fill, &
1931	vegetation_pars_f%fill, &
1932	.FALSE., 'vegetation_pars' )
1933	!
1934	!-- Inquire number of vegetation parameters
1935	CALL netcdf_data_input_get_dimension_length( id_surf, &
1936	vegetation_pars_f%np, &
1937	'nvegetation_pars' )
1938	!
1939	!-- Allocate dimension array and input array for surface fractions
1940	ALLOCATE( vegetation_pars_f%pars(0:vegetation_pars_f%np-1) )
1941	ALLOCATE( vegetation_pars_f%pars_xy(0:vegetation_pars_f%np-1, &
1942	nys:nyn,nxl:nxr) )
1943	!
1944	!-- Get dimension of the parameters
1945	CALL get_variable( id_surf, 'nvegetation_pars', &
1946	vegetation_pars_f%pars )
1947
1948	CALL get_variable( id_surf, 'vegetation_pars', &
1949	vegetation_pars_f%pars_xy, nxl, nxr, nys, nyn, &
1950	0, vegetation_pars_f%np-1 )
1951	ELSE
1952	vegetation_pars_f%from_file = .FALSE.
1953	ENDIF
1954
1955	!
1956	!-- Read root parameters/distribution and related information
1957	IF ( check_existence( var_names, 'soil_pars' ) ) THEN
1958	soil_pars_f%from_file = .TRUE.
1959	CALL get_attribute( id_surf, char_fill, &
1960	soil_pars_f%fill, &
1961	.FALSE., 'soil_pars' )
1962
1963	CALL get_attribute( id_surf, char_lod, &
1964	soil_pars_f%lod, &
1965	.FALSE., 'soil_pars' )
1966
1967	!
1968	!-- Inquire number of soil parameters
1969	CALL netcdf_data_input_get_dimension_length( id_surf, &
1970	soil_pars_f%np, &
1971	'nsoil_pars' )
1972	!
1973	!-- Read parameters array
1974	ALLOCATE( soil_pars_f%pars(0:soil_pars_f%np-1) )
1975	CALL get_variable( id_surf, 'nsoil_pars', soil_pars_f%pars )
1976
1977	!
1978	!-- In case of level of detail 2, also inquire number of vertical
1979	!-- soil layers, allocate memory and read the respective dimension
1980	IF ( soil_pars_f%lod == 2 ) THEN
1981	CALL netcdf_data_input_get_dimension_length( id_surf, &
1982	soil_pars_f%nz, &
1983	'zsoil' )
1984
1985	ALLOCATE( soil_pars_f%layers(0:soil_pars_f%nz-1) )
1986	CALL get_variable( id_surf, 'zsoil', soil_pars_f%layers )
1987
1988	ENDIF
1989
1990	!
1991	!-- Read soil parameters, depending on level of detail
1992	IF ( soil_pars_f%lod == 1 ) THEN
1993	ALLOCATE( soil_pars_f%pars_xy(0:soil_pars_f%np-1, &
1994	nys:nyn,nxl:nxr) )
1995
1996	CALL get_variable( id_surf, 'soil_pars', soil_pars_f%pars_xy, &
1997	nxl, nxr, nys, nyn, 0, soil_pars_f%np-1 )
1998
1999	ELSEIF ( soil_pars_f%lod == 2 ) THEN
2000	ALLOCATE( soil_pars_f%pars_xyz(0:soil_pars_f%np-1, &
2001	0:soil_pars_f%nz-1, &
2002	nys:nyn,nxl:nxr) )
2003	CALL get_variable( id_surf, 'soil_pars', &
2004	soil_pars_f%pars_xyz, &
2005	nxl, nxr, nys, nyn, 0, soil_pars_f%nz-1, &
2006	0, soil_pars_f%np-1 )
2007
2008	ENDIF
2009	ELSE
2010	soil_pars_f%from_file = .FALSE.
2011	ENDIF
2012
2013	!
2014	!-- Read water parameters and related information
2015	IF ( check_existence( var_names, 'water_pars' ) ) THEN
2016	water_pars_f%from_file = .TRUE.
2017	CALL get_attribute( id_surf, char_fill, &
2018	water_pars_f%fill, &
2019	.FALSE., 'water_pars' )
2020	!
2021	!-- Inquire number of water parameters
2022	CALL netcdf_data_input_get_dimension_length( id_surf, &
2023	water_pars_f%np, &
2024	'nwater_pars' )
2025	!
2026	!-- Allocate dimension array and input array for water parameters
2027	ALLOCATE( water_pars_f%pars(0:water_pars_f%np-1) )
2028	ALLOCATE( water_pars_f%pars_xy(0:water_pars_f%np-1, &
2029	nys:nyn,nxl:nxr) )
2030	!
2031	!-- Get dimension of water parameters
2032	CALL get_variable( id_surf, 'nwater_pars', water_pars_f%pars )
2033
2034	CALL get_variable( id_surf, 'water_pars', water_pars_f%pars_xy, &
2035	nxl, nxr, nys, nyn, 0, water_pars_f%np-1 )
2036	ELSE
2037	water_pars_f%from_file = .FALSE.
2038	ENDIF
2039	!
2040	!-- Read root area density - parametrized vegetation
2041	IF ( check_existence( var_names, 'root_area_dens_s' ) ) THEN
2042	root_area_density_lsm_f%from_file = .TRUE.
2043	CALL get_attribute( id_surf, char_fill, &
2044	root_area_density_lsm_f%fill, &
2045	.FALSE., 'root_area_dens_s' )
2046	!
2047	!-- Obtain number of soil layers from file and allocate variable
2048	CALL netcdf_data_input_get_dimension_length( id_surf, &
2049	root_area_density_lsm_f%nz, &
2050	'zsoil' )
2051	ALLOCATE( root_area_density_lsm_f%var &
2052	(0:root_area_density_lsm_f%nz-1, &
2053	nys:nyn,nxl:nxr) )
2054
2055	!
2056	!-- Read root-area density
2057	CALL get_variable( id_surf, 'root_area_dens_s', &
2058	root_area_density_lsm_f%var, &
2059	nxl, nxr, nys, nyn, &
2060	0, root_area_density_lsm_f%nz-1 )
2061
2062	ELSE
2063	root_area_density_lsm_f%from_file = .FALSE.
2064	ENDIF
2065	!
2066	!-- Read street type and street crossing
2067	IF ( check_existence( var_names, 'street_type' ) ) THEN
2068	street_type_f%from_file = .TRUE.
2069	CALL get_attribute( id_surf, char_fill, &
2070	street_type_f%fill, .FALSE., &
2071	'street_type' )
2072
2073	ALLOCATE ( street_type_f%var(nys:nyn,nxl:nxr) )
2074
2075	CALL get_variable( id_surf, 'street_type', street_type_f%var, &
2076	nxl, nxr, nys, nyn )
2077	ELSE
2078	street_type_f%from_file = .FALSE.
2079	ENDIF
2080
2081	IF ( check_existence( var_names, 'street_crossing' ) ) THEN
2082	street_crossing_f%from_file = .TRUE.
2083	CALL get_attribute( id_surf, char_fill, &
2084	street_crossing_f%fill, .FALSE., &
2085	'street_crossing' )
2086
2087	ALLOCATE ( street_crossing_f%var(nys:nyn,nxl:nxr) )
2088
2089	CALL get_variable( id_surf, 'street_crossing', &
2090	street_crossing_f%var, nxl, nxr, nys, nyn )
2091
2092	ELSE
2093	street_crossing_f%from_file = .FALSE.
2094	ENDIF
2095	!
2096	!-- Still missing: root_resolved and building_surface_pars.
2097	!-- Will be implemented as soon as they are available.
2098
2099	!
2100	!-- Finally, close input file
2101	CALL close_input_file( id_surf )
2102	#endif
2103	!
2104	!-- End of CPU measurement
2105	CALL cpu_log( log_point_s(82), 'NetCDF input', 'stop' )
2106	!
2107	!-- Exchange 1 ghost points for surface variables. Please note, ghost point
2108	!-- exchange for 3D parameter lists should be revised by using additional
2109	!-- MPI datatypes or rewriting exchange_horiz.
2110	!-- Moreover, varialbes will be resized in the following, including ghost
2111	!-- points.
2112	!-- Start with 2D Integer variables. Please note, for 8-bit integer
2113	!-- variables must be swapt to 32-bit integer before calling exchange_horiz.
2114	IF ( albedo_type_f%from_file ) THEN
2115	var_exchange_int = INT( albedo_type_f%fill, KIND = 1 )
2116	var_exchange_int(nys:nyn,nxl:nxr) = &
2117	INT( albedo_type_f%var(nys:nyn,nxl:nxr), KIND = 4 )
2118	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2119	DEALLOCATE( albedo_type_f%var )
2120	ALLOCATE( albedo_type_f%var(nysg:nyng,nxlg:nxrg) )
2121	albedo_type_f%var = INT( var_exchange_int, KIND = 1 )
2122	ENDIF
2123	IF ( pavement_type_f%from_file ) THEN
2124	var_exchange_int = INT( pavement_type_f%fill, KIND = 1 )
2125	var_exchange_int(nys:nyn,nxl:nxr) = &
2126	INT( pavement_type_f%var(nys:nyn,nxl:nxr), KIND = 4 )
2127	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2128	DEALLOCATE( pavement_type_f%var )
2129	ALLOCATE( pavement_type_f%var(nysg:nyng,nxlg:nxrg) )
2130	pavement_type_f%var = INT( var_exchange_int, KIND = 1 )
2131	ENDIF
2132	IF ( soil_type_f%from_file .AND. ALLOCATED( soil_type_f%var_2d ) ) THEN
2133	var_exchange_int = INT( soil_type_f%fill, KIND = 1 )
2134	var_exchange_int(nys:nyn,nxl:nxr) = &
2135	INT( soil_type_f%var_2d(nys:nyn,nxl:nxr), KIND = 4 )
2136	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2137	DEALLOCATE( soil_type_f%var_2d )
2138	ALLOCATE( soil_type_f%var_2d(nysg:nyng,nxlg:nxrg) )
2139	soil_type_f%var_2d = INT( var_exchange_int, KIND = 1 )
2140	ENDIF
2141	IF ( vegetation_type_f%from_file ) THEN
2142	var_exchange_int = INT( vegetation_type_f%fill, KIND = 1 )
2143	var_exchange_int(nys:nyn,nxl:nxr) = &
2144	INT( vegetation_type_f%var(nys:nyn,nxl:nxr), KIND = 4 )
2145	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2146	DEALLOCATE( vegetation_type_f%var )
2147	ALLOCATE( vegetation_type_f%var(nysg:nyng,nxlg:nxrg) )
2148	vegetation_type_f%var = INT( var_exchange_int, KIND = 1 )
2149	ENDIF
2150	IF ( water_type_f%from_file ) THEN
2151	var_exchange_int = INT( water_type_f%fill, KIND = 1 )
2152	var_exchange_int(nys:nyn,nxl:nxr) = &
2153	INT( water_type_f%var(nys:nyn,nxl:nxr), KIND = 4 )
2154	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2155	DEALLOCATE( water_type_f%var )
2156	ALLOCATE( water_type_f%var(nysg:nyng,nxlg:nxrg) )
2157	water_type_f%var = INT( var_exchange_int, KIND = 1 )
2158	ENDIF
2159	!
2160	!-- Exchange 1 ghost point for 3/4-D variables. For the sake of simplicity,
2161	!-- loop further dimensions to use 2D exchange routines.
2162	!-- This should be revised later by introducing new MPI datatypes.
2163	IF ( soil_type_f%from_file .AND. ALLOCATED( soil_type_f%var_3d ) ) &
2164	THEN
2165	ALLOCATE( var_dum_int_3d(0:nz_soil,nys:nyn,nxl:nxr) )
2166	var_dum_int_3d = soil_type_f%var_3d
2167	DEALLOCATE( soil_type_f%var_3d )
2168	ALLOCATE( soil_type_f%var_3d(0:nz_soil,nysg:nyng,nxlg:nxrg) )
2169	soil_type_f%var_3d = soil_type_f%fill
2170
2171	DO k = 0, nz_soil
2172	var_exchange_int(nys:nyn,nxl:nxr) = var_dum_int_3d(k,nys:nyn,nxl:nxr)
2173	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2174	soil_type_f%var_3d(k,:,:) = INT( var_exchange_int(:,:), KIND = 1 )
2175	ENDDO
2176	DEALLOCATE( var_dum_int_3d )
2177	ENDIF
2178
2179	IF ( surface_fraction_f%from_file ) THEN
2180	ALLOCATE( var_dum_real_3d(0:surface_fraction_f%nf-1,nys:nyn,nxl:nxr) )
2181	var_dum_real_3d = surface_fraction_f%frac
2182	DEALLOCATE( surface_fraction_f%frac )
2183	ALLOCATE( surface_fraction_f%frac(0:surface_fraction_f%nf-1, &
2184	nysg:nyng,nxlg:nxrg) )
2185	surface_fraction_f%frac = surface_fraction_f%fill
2186
2187	DO k = 0, surface_fraction_f%nf-1
2188	var_exchange_real(nys:nyn,nxl:nxr) = var_dum_real_3d(k,nys:nyn,nxl:nxr)
2189	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2190	surface_fraction_f%frac(k,:,:) = var_exchange_real(:,:)
2191	ENDDO
2192	DEALLOCATE( var_dum_real_3d )
2193	ENDIF
2194
2195	IF ( building_pars_f%from_file ) THEN
2196	ALLOCATE( var_dum_real_3d(0:building_pars_f%np-1,nys:nyn,nxl:nxr) )
2197	var_dum_real_3d = building_pars_f%pars_xy
2198	DEALLOCATE( building_pars_f%pars_xy )
2199	ALLOCATE( building_pars_f%pars_xy(0:building_pars_f%np-1, &
2200	nysg:nyng,nxlg:nxrg) )
2201	building_pars_f%pars_xy = building_pars_f%fill
2202	DO k = 0, building_pars_f%np-1
2203	var_exchange_real(nys:nyn,nxl:nxr) = &
2204	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2205	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2206	building_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2207	ENDDO
2208	DEALLOCATE( var_dum_real_3d )
2209	ENDIF
2210
2211	IF ( albedo_pars_f%from_file ) THEN
2212	ALLOCATE( var_dum_real_3d(0:albedo_pars_f%np-1,nys:nyn,nxl:nxr) )
2213	var_dum_real_3d = albedo_pars_f%pars_xy
2214	DEALLOCATE( albedo_pars_f%pars_xy )
2215	ALLOCATE( albedo_pars_f%pars_xy(0:albedo_pars_f%np-1, &
2216	nysg:nyng,nxlg:nxrg) )
2217	albedo_pars_f%pars_xy = albedo_pars_f%fill
2218	DO k = 0, albedo_pars_f%np-1
2219	var_exchange_real(nys:nyn,nxl:nxr) = &
2220	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2221	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2222	albedo_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2223	ENDDO
2224	DEALLOCATE( var_dum_real_3d )
2225	ENDIF
2226
2227	IF ( pavement_pars_f%from_file ) THEN
2228	ALLOCATE( var_dum_real_3d(0:pavement_pars_f%np-1,nys:nyn,nxl:nxr) )
2229	var_dum_real_3d = pavement_pars_f%pars_xy
2230	DEALLOCATE( pavement_pars_f%pars_xy )
2231	ALLOCATE( pavement_pars_f%pars_xy(0:pavement_pars_f%np-1, &
2232	nysg:nyng,nxlg:nxrg) )
2233	pavement_pars_f%pars_xy = pavement_pars_f%fill
2234	DO k = 0, pavement_pars_f%np-1
2235	var_exchange_real(nys:nyn,nxl:nxr) = &
2236	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2237	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2238	pavement_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2239	ENDDO
2240	DEALLOCATE( var_dum_real_3d )
2241	ENDIF
2242
2243	IF ( vegetation_pars_f%from_file ) THEN
2244	ALLOCATE( var_dum_real_3d(0:vegetation_pars_f%np-1,nys:nyn,nxl:nxr) )
2245	var_dum_real_3d = vegetation_pars_f%pars_xy
2246	DEALLOCATE( vegetation_pars_f%pars_xy )
2247	ALLOCATE( vegetation_pars_f%pars_xy(0:vegetation_pars_f%np-1, &
2248	nysg:nyng,nxlg:nxrg) )
2249	vegetation_pars_f%pars_xy = vegetation_pars_f%fill
2250	DO k = 0, vegetation_pars_f%np-1
2251	var_exchange_real(nys:nyn,nxl:nxr) = &
2252	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2253	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2254	vegetation_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2255	ENDDO
2256	DEALLOCATE( var_dum_real_3d )
2257	ENDIF
2258
2259	IF ( water_pars_f%from_file ) THEN
2260	ALLOCATE( var_dum_real_3d(0:water_pars_f%np-1,nys:nyn,nxl:nxr) )
2261	var_dum_real_3d = water_pars_f%pars_xy
2262	DEALLOCATE( water_pars_f%pars_xy )
2263	ALLOCATE( water_pars_f%pars_xy(0:water_pars_f%np-1, &
2264	nysg:nyng,nxlg:nxrg) )
2265	water_pars_f%pars_xy = water_pars_f%fill
2266	DO k = 0, water_pars_f%np-1
2267	var_exchange_real(nys:nyn,nxl:nxr) = &
2268	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2269	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2270	water_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2271	ENDDO
2272	DEALLOCATE( var_dum_real_3d )
2273	ENDIF
2274
2275	IF ( root_area_density_lsm_f%from_file ) THEN
2276	ALLOCATE( var_dum_real_3d(0:root_area_density_lsm_f%nz-1,nys:nyn,nxl:nxr) )
2277	var_dum_real_3d = root_area_density_lsm_f%var
2278	DEALLOCATE( root_area_density_lsm_f%var )
2279	ALLOCATE( root_area_density_lsm_f%var(0:root_area_density_lsm_f%nz-1,&
2280	nysg:nyng,nxlg:nxrg) )
2281	root_area_density_lsm_f%var = root_area_density_lsm_f%fill
2282
2283	DO k = 0, root_area_density_lsm_f%nz-1
2284	var_exchange_real(nys:nyn,nxl:nxr) = &
2285	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2286	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2287	root_area_density_lsm_f%var(k,:,:) = var_exchange_real(:,:)
2288	ENDDO
2289	DEALLOCATE( var_dum_real_3d )
2290	ENDIF
2291
2292	IF ( soil_pars_f%from_file ) THEN
2293	IF ( soil_pars_f%lod == 1 ) THEN
2294
2295	ALLOCATE( var_dum_real_3d(0:soil_pars_f%np-1,nys:nyn,nxl:nxr) )
2296	var_dum_real_3d = soil_pars_f%pars_xy
2297	DEALLOCATE( soil_pars_f%pars_xy )
2298	ALLOCATE( soil_pars_f%pars_xy(0:soil_pars_f%np-1, &
2299	nysg:nyng,nxlg:nxrg) )
2300	soil_pars_f%pars_xy = soil_pars_f%fill
2301
2302	DO k = 0, soil_pars_f%np-1
2303	var_exchange_real(nys:nyn,nxl:nxr) = &
2304	var_dum_real_3d(k,nys:nyn,nxl:nxr)
2305	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2306	soil_pars_f%pars_xy(k,:,:) = var_exchange_real(:,:)
2307	ENDDO
2308	DEALLOCATE( var_dum_real_3d )
2309	ELSEIF ( soil_pars_f%lod == 2 ) THEN
2310	ALLOCATE( var_dum_real_4d(0:soil_pars_f%np-1, &
2311	0:soil_pars_f%nz-1, &
2312	nys:nyn,nxl:nxr) )
2313	var_dum_real_4d = soil_pars_f%pars_xyz
2314	DEALLOCATE( soil_pars_f%pars_xyz )
2315	ALLOCATE( soil_pars_f%pars_xyz(0:soil_pars_f%np-1, &
2316	0:soil_pars_f%nz-1, &
2317	nysg:nyng,nxlg:nxrg) )
2318	soil_pars_f%pars_xyz = soil_pars_f%fill
2319
2320	DO k2 = 0, soil_pars_f%nz-1
2321	DO k = 0, soil_pars_f%np-1
2322	var_exchange_real(nys:nyn,nxl:nxr) = &
2323	var_dum_real_4d(k,k2,nys:nyn,nxl:nxr)
2324	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2325
2326	soil_pars_f%pars_xyz(k,k2,:,:) = var_exchange_real(:,:)
2327	ENDDO
2328	ENDDO
2329	DEALLOCATE( var_dum_real_4d )
2330	ENDIF
2331	ENDIF
2332
2333	IF ( pavement_subsurface_pars_f%from_file ) THEN
2334	ALLOCATE( var_dum_real_4d(0:pavement_subsurface_pars_f%np-1, &
2335	0:pavement_subsurface_pars_f%nz-1, &
2336	nys:nyn,nxl:nxr) )
2337	var_dum_real_4d = pavement_subsurface_pars_f%pars_xyz
2338	DEALLOCATE( pavement_subsurface_pars_f%pars_xyz )
2339	ALLOCATE( pavement_subsurface_pars_f%pars_xyz &
2340	(0:pavement_subsurface_pars_f%np-1, &
2341	0:pavement_subsurface_pars_f%nz-1, &
2342	nysg:nyng,nxlg:nxrg) )
2343	pavement_subsurface_pars_f%pars_xyz = pavement_subsurface_pars_f%fill
2344
2345	DO k2 = 0, pavement_subsurface_pars_f%nz-1
2346	DO k = 0, pavement_subsurface_pars_f%np-1
2347	var_exchange_real(nys:nyn,nxl:nxr) = &
2348	var_dum_real_4d(k,k2,nys:nyn,nxl:nxr)
2349	CALL exchange_horiz_2d( var_exchange_real, nbgp )
2350	pavement_subsurface_pars_f%pars_xyz(k,k2,:,:) = &
2351	var_exchange_real(:,:)
2352	ENDDO
2353	ENDDO
2354	DEALLOCATE( var_dum_real_4d )
2355	ENDIF
2356
2357	!
2358	!-- In case of non-cyclic boundary conditions, set Neumann conditions at the
2359	!-- lateral boundaries.
2360	IF ( .NOT. bc_ns_cyc ) THEN
2361	IF ( nys == 0 ) THEN
2362	IF ( albedo_type_f%from_file ) &
2363	albedo_type_f%var(-1,:) = albedo_type_f%var(0,:)
2364	IF ( pavement_type_f%from_file ) &
2365	pavement_type_f%var(-1,:) = pavement_type_f%var(0,:)
2366	IF ( soil_type_f%from_file ) THEN
2367	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
2368	soil_type_f%var_2d(-1,:) = soil_type_f%var_2d(0,:)
2369	ELSE
2370	soil_type_f%var_3d(:,-1,:) = soil_type_f%var_3d(:,0,:)
2371	ENDIF
2372	ENDIF
2373	IF ( vegetation_type_f%from_file ) &
2374	vegetation_type_f%var(-1,:) = vegetation_type_f%var(0,:)
2375	IF ( water_type_f%from_file ) &
2376	water_type_f%var(-1,:) = water_type_f%var(0,:)
2377	IF ( surface_fraction_f%from_file ) &
2378	surface_fraction_f%frac(:,-1,:) = surface_fraction_f%frac(:,0,:)
2379	IF ( building_pars_f%from_file ) &
2380	building_pars_f%pars_xy(:,-1,:) = building_pars_f%pars_xy(:,0,:)
2381	IF ( albedo_pars_f%from_file ) &
2382	albedo_pars_f%pars_xy(:,-1,:) = albedo_pars_f%pars_xy(:,0,:)
2383	IF ( pavement_pars_f%from_file ) &
2384	pavement_pars_f%pars_xy(:,-1,:) = pavement_pars_f%pars_xy(:,0,:)
2385	IF ( vegetation_pars_f%from_file ) &
2386	vegetation_pars_f%pars_xy(:,-1,:) = &
2387	vegetation_pars_f%pars_xy(:,0,:)
2388	IF ( water_pars_f%from_file ) &
2389	water_pars_f%pars_xy(:,-1,:) = water_pars_f%pars_xy(:,0,:)
2390	IF ( root_area_density_lsm_f%from_file ) &
2391	root_area_density_lsm_f%var(:,-1,:) = &
2392	root_area_density_lsm_f%var(:,0,:)
2393	IF ( soil_pars_f%from_file ) THEN
2394	IF ( soil_pars_f%lod == 1 ) THEN
2395	soil_pars_f%pars_xy(:,-1,:) = soil_pars_f%pars_xy(:,0,:)
2396	ELSE
2397	soil_pars_f%pars_xyz(:,:,-1,:) = soil_pars_f%pars_xyz(:,:,0,:)
2398	ENDIF
2399	ENDIF
2400	IF ( pavement_subsurface_pars_f%from_file ) &
2401	pavement_subsurface_pars_f%pars_xyz(:,:,-1,:) = &
2402	pavement_subsurface_pars_f%pars_xyz(:,:,0,:)
2403	ENDIF
2404
2405	IF ( nyn == ny ) THEN
2406	IF ( albedo_type_f%from_file ) &
2407	albedo_type_f%var(ny+1,:) = albedo_type_f%var(ny,:)
2408	IF ( pavement_type_f%from_file ) &
2409	pavement_type_f%var(ny+1,:) = pavement_type_f%var(ny,:)
2410	IF ( soil_type_f%from_file ) THEN
2411	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
2412	soil_type_f%var_2d(ny+1,:) = soil_type_f%var_2d(ny,:)
2413	ELSE
2414	soil_type_f%var_3d(:,ny+1,:) = soil_type_f%var_3d(:,ny,:)
2415	ENDIF
2416	ENDIF
2417	IF ( vegetation_type_f%from_file ) &
2418	vegetation_type_f%var(ny+1,:) = vegetation_type_f%var(ny,:)
2419	IF ( water_type_f%from_file ) &
2420	water_type_f%var(ny+1,:) = water_type_f%var(ny,:)
2421	IF ( surface_fraction_f%from_file ) &
2422	surface_fraction_f%frac(:,ny+1,:) = &
2423	surface_fraction_f%frac(:,ny,:)
2424	IF ( building_pars_f%from_file ) &
2425	building_pars_f%pars_xy(:,ny+1,:) = &
2426	building_pars_f%pars_xy(:,ny,:)
2427	IF ( albedo_pars_f%from_file ) &
2428	albedo_pars_f%pars_xy(:,ny+1,:) = albedo_pars_f%pars_xy(:,ny,:)
2429	IF ( pavement_pars_f%from_file ) &
2430	pavement_pars_f%pars_xy(:,ny+1,:) = &
2431	pavement_pars_f%pars_xy(:,ny,:)
2432	IF ( vegetation_pars_f%from_file ) &
2433	vegetation_pars_f%pars_xy(:,ny+1,:) = &
2434	vegetation_pars_f%pars_xy(:,ny,:)
2435	IF ( water_pars_f%from_file ) &
2436	water_pars_f%pars_xy(:,ny+1,:) = water_pars_f%pars_xy(:,ny,:)
2437	IF ( root_area_density_lsm_f%from_file ) &
2438	root_area_density_lsm_f%var(:,ny+1,:) = &
2439	root_area_density_lsm_f%var(:,ny,:)
2440	IF ( soil_pars_f%from_file ) THEN
2441	IF ( soil_pars_f%lod == 1 ) THEN
2442	soil_pars_f%pars_xy(:,ny+1,:) = soil_pars_f%pars_xy(:,ny,:)
2443	ELSE
2444	soil_pars_f%pars_xyz(:,:,ny+1,:) = &
2445	soil_pars_f%pars_xyz(:,:,ny,:)
2446	ENDIF
2447	ENDIF
2448	IF ( pavement_subsurface_pars_f%from_file ) &
2449	pavement_subsurface_pars_f%pars_xyz(:,:,ny+1,:) = &
2450	pavement_subsurface_pars_f%pars_xyz(:,:,ny,:)
2451	ENDIF
2452	ENDIF
2453
2454	IF ( .NOT. bc_lr_cyc ) THEN
2455	IF ( nxl == 0 ) THEN
2456	IF ( albedo_type_f%from_file ) &
2457	albedo_type_f%var(:,-1) = albedo_type_f%var(:,0)
2458	IF ( pavement_type_f%from_file ) &
2459	pavement_type_f%var(:,-1) = pavement_type_f%var(:,0)
2460	IF ( soil_type_f%from_file ) THEN
2461	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
2462	soil_type_f%var_2d(:,-1) = soil_type_f%var_2d(:,0)
2463	ELSE
2464	soil_type_f%var_3d(:,:,-1) = soil_type_f%var_3d(:,:,0)
2465	ENDIF
2466	ENDIF
2467	IF ( vegetation_type_f%from_file ) &
2468	vegetation_type_f%var(:,-1) = vegetation_type_f%var(:,0)
2469	IF ( water_type_f%from_file ) &
2470	water_type_f%var(:,-1) = water_type_f%var(:,0)
2471	IF ( surface_fraction_f%from_file ) &
2472	surface_fraction_f%frac(:,:,-1) = surface_fraction_f%frac(:,:,0)
2473	IF ( building_pars_f%from_file ) &
2474	building_pars_f%pars_xy(:,:,-1) = building_pars_f%pars_xy(:,:,0)
2475	IF ( albedo_pars_f%from_file ) &
2476	albedo_pars_f%pars_xy(:,:,-1) = albedo_pars_f%pars_xy(:,:,0)
2477	IF ( pavement_pars_f%from_file ) &
2478	pavement_pars_f%pars_xy(:,:,-1) = pavement_pars_f%pars_xy(:,:,0)
2479	IF ( vegetation_pars_f%from_file ) &
2480	vegetation_pars_f%pars_xy(:,:,-1) = &
2481	vegetation_pars_f%pars_xy(:,:,0)
2482	IF ( water_pars_f%from_file ) &
2483	water_pars_f%pars_xy(:,:,-1) = water_pars_f%pars_xy(:,:,0)
2484	IF ( root_area_density_lsm_f%from_file ) &
2485	root_area_density_lsm_f%var(:,:,-1) = &
2486	root_area_density_lsm_f%var(:,:,0)
2487	IF ( soil_pars_f%from_file ) THEN
2488	IF ( soil_pars_f%lod == 1 ) THEN
2489	soil_pars_f%pars_xy(:,:,-1) = soil_pars_f%pars_xy(:,:,0)
2490	ELSE
2491	soil_pars_f%pars_xyz(:,:,:,-1) = soil_pars_f%pars_xyz(:,:,:,0)
2492	ENDIF
2493	ENDIF
2494	IF ( pavement_subsurface_pars_f%from_file ) &
2495	pavement_subsurface_pars_f%pars_xyz(:,:,:,-1) = &
2496	pavement_subsurface_pars_f%pars_xyz(:,:,:,0)
2497	ENDIF
2498
2499	IF ( nxr == nx ) THEN
2500	IF ( albedo_type_f%from_file ) &
2501	albedo_type_f%var(:,nx+1) = albedo_type_f%var(:,nx)
2502	IF ( pavement_type_f%from_file ) &
2503	pavement_type_f%var(:,nx+1) = pavement_type_f%var(:,nx)
2504	IF ( soil_type_f%from_file ) THEN
2505	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
2506	soil_type_f%var_2d(:,nx+1) = soil_type_f%var_2d(:,nx)
2507	ELSE
2508	soil_type_f%var_3d(:,:,nx+1) = soil_type_f%var_3d(:,:,nx)
2509	ENDIF
2510	ENDIF
2511	IF ( vegetation_type_f%from_file ) &
2512	vegetation_type_f%var(:,nx+1) = vegetation_type_f%var(:,nx)
2513	IF ( water_type_f%from_file ) &
2514	water_type_f%var(:,nx+1) = water_type_f%var(:,nx)
2515	IF ( surface_fraction_f%from_file ) &
2516	surface_fraction_f%frac(:,:,nx+1) = &
2517	surface_fraction_f%frac(:,:,nx)
2518	IF ( building_pars_f%from_file ) &
2519	building_pars_f%pars_xy(:,:,nx+1) = &
2520	building_pars_f%pars_xy(:,:,nx)
2521	IF ( albedo_pars_f%from_file ) &
2522	albedo_pars_f%pars_xy(:,:,nx+1) = albedo_pars_f%pars_xy(:,:,nx)
2523	IF ( pavement_pars_f%from_file ) &
2524	pavement_pars_f%pars_xy(:,:,nx+1) = &
2525	pavement_pars_f%pars_xy(:,:,nx)
2526	IF ( vegetation_pars_f%from_file ) &
2527	vegetation_pars_f%pars_xy(:,:,nx+1) = &
2528	vegetation_pars_f%pars_xy(:,:,nx)
2529	IF ( water_pars_f%from_file ) &
2530	water_pars_f%pars_xy(:,:,nx+1) = water_pars_f%pars_xy(:,:,nx)
2531	IF ( root_area_density_lsm_f%from_file ) &
2532	root_area_density_lsm_f%var(:,:,nx+1) = &
2533	root_area_density_lsm_f%var(:,:,nx)
2534	IF ( soil_pars_f%from_file ) THEN
2535	IF ( soil_pars_f%lod == 1 ) THEN
2536	soil_pars_f%pars_xy(:,:,nx+1) = soil_pars_f%pars_xy(:,:,nx)
2537	ELSE
2538	soil_pars_f%pars_xyz(:,:,:,nx+1) = &
2539	soil_pars_f%pars_xyz(:,:,:,nx)
2540	ENDIF
2541	ENDIF
2542	IF ( pavement_subsurface_pars_f%from_file ) &
2543	pavement_subsurface_pars_f%pars_xyz(:,:,:,nx+1) = &
2544	pavement_subsurface_pars_f%pars_xyz(:,:,:,nx)
2545	ENDIF
2546	ENDIF
2547
2548	END SUBROUTINE netcdf_data_input_surface_data
2549
2550	!------------------------------------------------------------------------------!
2551	! Description:
2552	! ------------
2553	!> Reads uvem lookup table information.
2554	!------------------------------------------------------------------------------!
2555	SUBROUTINE netcdf_data_input_uvem
2556
2557	USE indices, &
2558	ONLY: nxl, nxr, nyn, nys
2559
2560	IMPLICIT NONE
2561
2562	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
2563
2564
2565	INTEGER(iwp) :: id_uvem !< NetCDF id of uvem lookup table input file
2566	INTEGER(iwp) :: nli = 35 !< dimension length of lookup table in x
2567	INTEGER(iwp) :: nlj = 9 !< dimension length of lookup table in y
2568	INTEGER(iwp) :: nlk = 90 !< dimension length of lookup table in z
2569	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2570	!
2571	!-- Input via uv exposure model lookup table input
2572	IF ( input_pids_uvem ) THEN
2573
2574	#if defined ( __netcdf )
2575	!
2576	!-- Open file in read-only mode
2577	CALL open_read_file( TRIM( input_file_uvem ) // &
2578	TRIM( coupling_char ), id_uvem )
2579	!
2580	!-- At first, inquire all variable names.
2581	!-- This will be used to check whether an input variable exist or not.
2582	CALL inquire_num_variables( id_uvem, num_vars )
2583	!
2584	!-- Allocate memory to store variable names and inquire them.
2585	ALLOCATE( var_names(1:num_vars) )
2586	CALL inquire_variable_names( id_uvem, var_names )
2587	!
2588	!-- uvem integration
2589	IF ( check_existence( var_names, 'int_factors' ) ) THEN
2590	uvem_integration_f%from_file = .TRUE.
2591	!
2592	!-- Input 2D uvem integration.
2593	ALLOCATE ( uvem_integration_f%var(0:nlj,0:nli) )
2594
2595	CALL get_variable( id_uvem, 'int_factors', uvem_integration_f%var, 0, nli, 0, nlj )
2596	ELSE
2597	uvem_integration_f%from_file = .FALSE.
2598	ENDIF
2599	!
2600	!-- uvem irradiance
2601	IF ( check_existence( var_names, 'irradiance' ) ) THEN
2602	uvem_irradiance_f%from_file = .TRUE.
2603	!
2604	!-- Input 2D uvem irradiance.
2605	ALLOCATE ( uvem_irradiance_f%var(0:nlk, 0:2) )
2606
2607	CALL get_variable( id_uvem, 'irradiance', uvem_irradiance_f%var, 0, 2, 0, nlk )
2608	ELSE
2609	uvem_irradiance_f%from_file = .FALSE.
2610	ENDIF
2611	!
2612	!-- uvem porjection areas
2613	IF ( check_existence( var_names, 'projarea' ) ) THEN
2614	uvem_projarea_f%from_file = .TRUE.
2615	!
2616	!-- Input 3D uvem projection area (human geometgry)
2617	ALLOCATE ( uvem_projarea_f%var(0:2,0:nlj,0:nli) )
2618
2619	CALL get_variable( id_uvem, 'projarea', uvem_projarea_f%var, 0, nli, 0, nlj, 0, 2 )
2620	ELSE
2621	uvem_projarea_f%from_file = .FALSE.
2622	ENDIF
2623	!
2624	!-- uvem radiance
2625	IF ( check_existence( var_names, 'radiance' ) ) THEN
2626	uvem_radiance_f%from_file = .TRUE.
2627	!
2628	!-- Input 3D uvem radiance
2629	ALLOCATE ( uvem_radiance_f%var(0:nlk,0:nlj,0:nli) )
2630
2631	CALL get_variable( id_uvem, 'radiance', uvem_radiance_f%var, 0, nli, 0, nlj, 0, nlk )
2632	ELSE
2633	uvem_radiance_f%from_file = .FALSE.
2634	ENDIF
2635	!
2636	!-- Read building obstruction
2637	IF ( check_existence( var_names, 'obstruction' ) ) THEN
2638	building_obstruction_full%from_file = .TRUE.
2639	!-- Input 3D uvem building obstruction
2640	ALLOCATE ( building_obstruction_full%var_3d(0:44,0:2,0:2) )
2641	CALL get_variable( id_uvem, 'obstruction', building_obstruction_full%var_3d,0, 2, 0, 2, 0, 44 )
2642	ELSE
2643	building_obstruction_full%from_file = .FALSE.
2644	ENDIF
2645	!
2646	IF ( check_existence( var_names, 'obstruction' ) ) THEN
2647	building_obstruction_f%from_file = .TRUE.
2648	!
2649	!-- Input 3D uvem building obstruction
2650	ALLOCATE ( building_obstruction_f%var_3d(0:44,nys:nyn,nxl:nxr) )
2651	!
2652	CALL get_variable( id_uvem, 'obstruction', building_obstruction_f%var_3d, &
2653	nxl, nxr, nys, nyn, 0, 44 )
2654	ELSE
2655	building_obstruction_f%from_file = .FALSE.
2656	ENDIF
2657	!
2658	!-- Close uvem lookup table input file
2659	CALL close_input_file( id_uvem )
2660	#else
2661	CONTINUE
2662	#endif
2663	ENDIF
2664	END SUBROUTINE netcdf_data_input_uvem
2665
2666	!------------------------------------------------------------------------------!
2667	! Description:
2668	! ------------
2669	!> Reads orography and building information.
2670	!------------------------------------------------------------------------------!
2671	SUBROUTINE netcdf_data_input_topo
2672
2673	USE control_parameters, &
2674	ONLY: bc_lr_cyc, bc_ns_cyc, message_string, topography
2675
2676	USE indices, &
2677	ONLY: nbgp, nx, nxl, nxr, ny, nyn, nys, nzb
2678
2679
2680	IMPLICIT NONE
2681
2682	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names !< variable names in static input file
2683
2684
2685	INTEGER(iwp) :: i !< running index along x-direction
2686	INTEGER(iwp) :: ii !< running index for IO blocks
2687	INTEGER(iwp) :: id_topo !< NetCDF id of topograhy input file
2688	INTEGER(iwp) :: j !< running index along y-direction
2689	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2690	INTEGER(iwp) :: skip_n_rows !< counting variable to skip rows while reading topography file
2691
2692	INTEGER(iwp), DIMENSION(nys-nbgp:nyn+nbgp,nxl-nbgp:nxr+nbgp) :: var_exchange_int !< dummy variables used to exchange 32-bit Integer arrays
2693
2694	REAL(wp) :: dum !< dummy variable to skip columns while reading topography file
2695	!
2696	!-- CPU measurement
2697	CALL cpu_log( log_point_s(83), 'NetCDF/ASCII input topo', 'start' )
2698
2699	!
2700	!-- Input via palm-input data standard
2701	IF ( input_pids_static ) THEN
2702	#if defined ( __netcdf )
2703	!
2704	!-- Open file in read-only mode
2705	CALL open_read_file( TRIM( input_file_static ) // &
2706	TRIM( coupling_char ), id_topo )
2707	!
2708	!-- At first, inquire all variable names.
2709	!-- This will be used to check whether an input variable exist
2710	!-- or not.
2711	CALL inquire_num_variables( id_topo, num_vars )
2712	!
2713	!-- Allocate memory to store variable names and inquire them.
2714	ALLOCATE( var_names(1:num_vars) )
2715	CALL inquire_variable_names( id_topo, var_names )
2716	!
2717	!-- Read x, y - dimensions. Only required for consistency checks.
2718	CALL netcdf_data_input_get_dimension_length( id_topo, dim_static%nx, 'x' )
2719	CALL netcdf_data_input_get_dimension_length( id_topo, dim_static%ny, 'y' )
2720	ALLOCATE( dim_static%x(0:dim_static%nx-1) )
2721	ALLOCATE( dim_static%y(0:dim_static%ny-1) )
2722	CALL get_variable( id_topo, 'x', dim_static%x )
2723	CALL get_variable( id_topo, 'y', dim_static%y )
2724	!
2725	!-- Terrain height. First, get variable-related _FillValue attribute
2726	IF ( check_existence( var_names, 'zt' ) ) THEN
2727	terrain_height_f%from_file = .TRUE.
2728	CALL get_attribute( id_topo, char_fill, terrain_height_f%fill, &
2729	.FALSE., 'zt' )
2730	!
2731	!-- Input 2D terrain height.
2732	ALLOCATE ( terrain_height_f%var(nys:nyn,nxl:nxr) )
2733
2734	CALL get_variable( id_topo, 'zt', terrain_height_f%var, &
2735	nxl, nxr, nys, nyn )
2736
2737	ELSE
2738	terrain_height_f%from_file = .FALSE.
2739	ENDIF
2740
2741	!
2742	!-- Read building height. First, read its _FillValue attribute,
2743	!-- as well as lod attribute
2744	buildings_f%from_file = .FALSE.
2745	IF ( check_existence( var_names, 'buildings_2d' ) ) THEN
2746	buildings_f%from_file = .TRUE.
2747	CALL get_attribute( id_topo, char_lod, buildings_f%lod, &
2748	.FALSE., 'buildings_2d' )
2749
2750	CALL get_attribute( id_topo, char_fill, buildings_f%fill1, &
2751	.FALSE., 'buildings_2d' )
2752
2753	!
2754	!-- Read 2D buildings
2755	IF ( buildings_f%lod == 1 ) THEN
2756	ALLOCATE ( buildings_f%var_2d(nys:nyn,nxl:nxr) )
2757
2758	CALL get_variable( id_topo, 'buildings_2d', &
2759	buildings_f%var_2d, &
2760	nxl, nxr, nys, nyn )
2761	ELSE
2762	message_string = 'NetCDF attribute lod ' // &
2763	'(level of detail) is not set ' // &
2764	'properly for buildings_2d.'
2765	CALL message( 'netcdf_data_input_mod', 'PA0540', &
2766	1, 2, 0, 6, 0 )
2767	ENDIF
2768	ENDIF
2769	!
2770	!-- If available, also read 3D building information. If both are
2771	!-- available, use 3D information.
2772	IF ( check_existence( var_names, 'buildings_3d' ) ) THEN
2773	buildings_f%from_file = .TRUE.
2774	CALL get_attribute( id_topo, char_lod, buildings_f%lod, &
2775	.FALSE., 'buildings_3d' )
2776
2777	CALL get_attribute( id_topo, char_fill, buildings_f%fill2, &
2778	.FALSE., 'buildings_3d' )
2779
2780	CALL netcdf_data_input_get_dimension_length( id_topo, &
2781	buildings_f%nz, 'z' )
2782	!
2783	!-- Read 3D buildings
2784	IF ( buildings_f%lod == 2 ) THEN
2785	ALLOCATE( buildings_f%z(nzb:buildings_f%nz-1) )
2786	CALL get_variable( id_topo, 'z', buildings_f%z )
2787
2788	ALLOCATE( buildings_f%var_3d(nzb:buildings_f%nz-1, &
2789	nys:nyn,nxl:nxr) )
2790	buildings_f%var_3d = 0
2791
2792	CALL get_variable( id_topo, 'buildings_3d', &
2793	buildings_f%var_3d, &
2794	nxl, nxr, nys, nyn, 0, buildings_f%nz-1 )
2795	ELSE
2796	message_string = 'NetCDF attribute lod ' // &
2797	'(level of detail) is not set ' // &
2798	'properly for buildings_3d.'
2799	CALL message( 'netcdf_data_input_mod', 'PA0541', &
2800	1, 2, 0, 6, 0 )
2801	ENDIF
2802	ENDIF
2803	!
2804	!-- Read building IDs and its FillValue attribute. Further required
2805	!-- for mapping buildings on top of orography.
2806	IF ( check_existence( var_names, 'building_id' ) ) THEN
2807	building_id_f%from_file = .TRUE.
2808	CALL get_attribute( id_topo, char_fill, &
2809	building_id_f%fill, .FALSE., &
2810	'building_id' )
2811
2812	ALLOCATE ( building_id_f%var(nys:nyn,nxl:nxr) )
2813
2814	CALL get_variable( id_topo, 'building_id', building_id_f%var, &
2815	nxl, nxr, nys, nyn )
2816	ELSE
2817	building_id_f%from_file = .FALSE.
2818	ENDIF
2819	!
2820	!-- Read building_type and required attributes.
2821	IF ( check_existence( var_names, 'building_type' ) ) THEN
2822	building_type_f%from_file = .TRUE.
2823	CALL get_attribute( id_topo, char_fill, &
2824	building_type_f%fill, .FALSE., &
2825	'building_type' )
2826
2827	ALLOCATE ( building_type_f%var(nys:nyn,nxl:nxr) )
2828
2829	CALL get_variable( id_topo, 'building_type', building_type_f%var, &
2830	nxl, nxr, nys, nyn )
2831
2832	ELSE
2833	building_type_f%from_file = .FALSE.
2834	ENDIF
2835	!
2836	!-- Close topography input file
2837	CALL close_input_file( id_topo )
2838	#else
2839	CONTINUE
2840	#endif
2841	!
2842	!-- ASCII input
2843	ELSEIF ( TRIM( topography ) == 'read_from_file' ) THEN
2844
2845	DO ii = 0, io_blocks-1
2846	IF ( ii == io_group ) THEN
2847
2848	OPEN( 90, FILE='TOPOGRAPHY_DATA'//TRIM( coupling_char ), &
2849	STATUS='OLD', FORM='FORMATTED', ERR=10 )
2850	!
2851	!-- Read topography PE-wise. Rows are read from nyn to nys, columns
2852	!-- are read from nxl to nxr. At first, ny-nyn rows need to be skipped.
2853	skip_n_rows = 0
2854	DO WHILE ( skip_n_rows < ny - nyn )
2855	READ( 90, * )
2856	skip_n_rows = skip_n_rows + 1
2857	ENDDO
2858	!
2859	!-- Read data from nyn to nys and nxl to nxr. Therefore, skip
2860	!-- column until nxl-1 is reached
2861	ALLOCATE ( buildings_f%var_2d(nys:nyn,nxl:nxr) )
2862	DO j = nyn, nys, -1
2863	READ( 90, *, ERR=11, END=11 ) &
2864	( dum, i = 0, nxl-1 ), &
2865	( buildings_f%var_2d(j,i), i = nxl, nxr )
2866	ENDDO
2867
2868	GOTO 12
2869
2870	10 message_string = 'file TOPOGRAPHY_DATA'// &
2871	TRIM( coupling_char )// ' does not exist'
2872	CALL message( 'netcdf_data_input_mod', 'PA0208', 1, 2, 0, 6, 0 )
2873
2874	11 message_string = 'errors in file TOPOGRAPHY_DATA'// &
2875	TRIM( coupling_char )
2876	CALL message( 'netcdf_data_input_mod', 'PA0209', 2, 2, 0, 6, 0 )
2877
2878	12 CLOSE( 90 )
2879	buildings_f%from_file = .TRUE.
2880
2881	ENDIF
2882	#if defined( __parallel )
2883	CALL MPI_BARRIER( comm2d, ierr )
2884	#endif
2885	ENDDO
2886
2887	ENDIF
2888	!
2889	!-- End of CPU measurement
2890	CALL cpu_log( log_point_s(83), 'NetCDF/ASCII input topo', 'stop' )
2891	!
2892	!-- Check for minimum requirement to setup building topography. If buildings
2893	!-- are provided, also an ID and a type are required.
2894	!-- Note, doing this check in check_parameters
2895	!-- will be too late (data will be used for grid inititialization before).
2896	IF ( input_pids_static ) THEN
2897	IF ( buildings_f%from_file .AND. &
2898	.NOT. building_id_f%from_file ) THEN
2899	message_string = 'If building heigths are prescribed in ' // &
2900	'static input file, also an ID is required.'
2901	CALL message( 'netcdf_data_input_mod', 'PA0542', 1, 2, 0, 6, 0 )
2902	ENDIF
2903	ENDIF
2904	!
2905	!-- In case no terrain height is provided by static input file, allocate
2906	!-- array nevertheless and set terrain height to 0, which simplifies
2907	!-- topography initialization.
2908	IF ( .NOT. terrain_height_f%from_file ) THEN
2909	ALLOCATE ( terrain_height_f%var(nys:nyn,nxl:nxr) )
2910	terrain_height_f%var = 0.0_wp
2911	ENDIF
2912	!
2913	!-- Finally, exchange 1 ghost point for building ID and type.
2914	!-- In case of non-cyclic boundary conditions set Neumann conditions at the
2915	!-- lateral boundaries.
2916	IF ( building_id_f%from_file ) THEN
2917	var_exchange_int = building_id_f%fill
2918	var_exchange_int(nys:nyn,nxl:nxr) = building_id_f%var(nys:nyn,nxl:nxr)
2919	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2920	DEALLOCATE( building_id_f%var )
2921	ALLOCATE( building_id_f%var(nys-nbgp:nyn+nbgp,nxl-nbgp:nxr+nbgp) )
2922	building_id_f%var = var_exchange_int
2923
2924	IF ( .NOT. bc_ns_cyc ) THEN
2925	IF ( nys == 0 ) building_id_f%var(-1,:) = building_id_f%var(0,:)
2926	IF ( nyn == ny ) building_id_f%var(ny+1,:) = building_id_f%var(ny,:)
2927	ENDIF
2928	IF ( .NOT. bc_lr_cyc ) THEN
2929	IF ( nxl == 0 ) building_id_f%var(:,-1) = building_id_f%var(:,0)
2930	IF ( nxr == nx ) building_id_f%var(:,nx+1) = building_id_f%var(:,nx)
2931	ENDIF
2932	ENDIF
2933
2934	IF ( building_type_f%from_file ) THEN
2935	var_exchange_int = INT( building_type_f%fill, KIND = 4 )
2936	var_exchange_int(nys:nyn,nxl:nxr) = &
2937	INT( building_type_f%var(nys:nyn,nxl:nxr), KIND = 4 )
2938	CALL exchange_horiz_2d_int( var_exchange_int, nys, nyn, nxl, nxr, nbgp )
2939	DEALLOCATE( building_type_f%var )
2940	ALLOCATE( building_type_f%var(nys-nbgp:nyn+nbgp,nxl-nbgp:nxr+nbgp) )
2941	building_type_f%var = INT( var_exchange_int, KIND = 1 )
2942
2943	IF ( .NOT. bc_ns_cyc ) THEN
2944	IF ( nys == 0 ) building_type_f%var(-1,:) = building_type_f%var(0,:)
2945	IF ( nyn == ny ) building_type_f%var(ny+1,:) = building_type_f%var(ny,:)
2946	ENDIF
2947	IF ( .NOT. bc_lr_cyc ) THEN
2948	IF ( nxl == 0 ) building_type_f%var(:,-1) = building_type_f%var(:,0)
2949	IF ( nxr == nx ) building_type_f%var(:,nx+1) = building_type_f%var(:,nx)
2950	ENDIF
2951	ENDIF
2952
2953	END SUBROUTINE netcdf_data_input_topo
2954
2955	!------------------------------------------------------------------------------!
2956	! Description:
2957	! ------------
2958	!> Reads initialization data of u, v, w, pt, q, geostrophic wind components,
2959	!> as well as soil moisture and soil temperature, derived from larger-scale
2960	!> model (COSMO) by Inifor.
2961	!------------------------------------------------------------------------------!
2962	SUBROUTINE netcdf_data_input_init_3d
2963
2964	USE arrays_3d, &
2965	ONLY: q, pt, u, v, w, zu, zw
2966
2967	USE control_parameters, &
2968	ONLY: bc_lr_cyc, bc_ns_cyc, humidity, message_string, neutral
2969
2970	USE indices, &
2971	ONLY: nx, nxl, nxlu, nxr, ny, nyn, nys, nysv, nzb, nz, nzt
2972
2973	IMPLICIT NONE
2974
2975	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names
2976
2977	LOGICAL :: dynamic_3d = .TRUE. !< flag indicating that 3D data is read from dynamic file
2978
2979	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
2980	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
2981
2982	LOGICAL :: check_passed !< flag indicating if a check passed
2983
2984	!
2985	!-- Skip routine if no input file with dynamic input data is available.
2986	IF ( .NOT. input_pids_dynamic ) RETURN
2987	!
2988	!-- Please note, Inifor is designed to provide initial data for u and v for
2989	!-- the prognostic grid points in case of lateral Dirichlet conditions.
2990	!-- This means that Inifor provides data from nxlu:nxr (for u) and
2991	!-- from nysv:nyn (for v) at the left and south domain boundary, respectively.
2992	!-- However, as work-around for the moment, PALM will run with cyclic
2993	!-- conditions and will be initialized with data provided by Inifor
2994	!-- boundaries in case of Dirichlet.
2995	!-- Hence, simply set set nxlu/nysv to 1 (will be reset to its original value
2996	!-- at the end of this routine.
2997	IF ( bc_lr_cyc .AND. nxl == 0 ) nxlu = 1
2998	IF ( bc_ns_cyc .AND. nys == 0 ) nysv = 1
2999
3000	!
3001	!-- CPU measurement
3002	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'start' )
3003
3004	#if defined ( __netcdf )
3005	!
3006	!-- Open file in read-only mode
3007	CALL open_read_file( TRIM( input_file_dynamic ) // &
3008	TRIM( coupling_char ), id_dynamic )
3009
3010	!
3011	!-- At first, inquire all variable names.
3012	CALL inquire_num_variables( id_dynamic, num_vars )
3013	!
3014	!-- Allocate memory to store variable names.
3015	ALLOCATE( var_names(1:num_vars) )
3016	CALL inquire_variable_names( id_dynamic, var_names )
3017	!
3018	!-- Read vertical dimension of scalar und w grid.
3019	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzu, 'z' )
3020	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzw, 'zw' )
3021	!
3022	!-- Read also the horizontal dimensions. These are used just used fo
3023	!-- checking the compatibility with the PALM grid before reading.
3024	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nx, 'x' )
3025	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nxu, 'xu' )
3026	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%ny, 'y' )
3027	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nyv, 'yv' )
3028
3029	!
3030	!-- Check for correct horizontal and vertical dimension. Please note,
3031	!-- checks are performed directly here and not called from
3032	!-- check_parameters as some varialbes are still not allocated there.
3033	!-- Moreover, please note, u- and v-grid has 1 grid point less on
3034	!-- Inifor grid.
3035	IF ( init_3d%nx-1 /= nx .OR. init_3d%nxu-1 /= nx - 1 .OR. &
3036	init_3d%ny-1 /= ny .OR. init_3d%nyv-1 /= ny - 1 ) THEN
3037	message_string = 'Number of inifor horizontal grid points '// &
3038	'does not match the number of numeric grid '// &
3039	'points.'
3040	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
3041	ENDIF
3042
3043	IF ( init_3d%nzu /= nz ) THEN
3044	message_string = 'Number of inifor vertical grid points ' // &
3045	'does not match the number of numeric grid '// &
3046	'points.'
3047	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
3048	ENDIF
3049	!
3050	!-- Read vertical dimensions. Later, these are required for eventual
3051	!-- inter- and extrapolations of the initialization data.
3052	IF ( check_existence( var_names, 'z' ) ) THEN
3053	ALLOCATE( init_3d%zu_atmos(1:init_3d%nzu) )
3054	CALL get_variable( id_dynamic, 'z', init_3d%zu_atmos )
3055	ENDIF
3056	IF ( check_existence( var_names, 'zw' ) ) THEN
3057	ALLOCATE( init_3d%zw_atmos(1:init_3d%nzw) )
3058	CALL get_variable( id_dynamic, 'zw', init_3d%zw_atmos )
3059	ENDIF
3060	!
3061	!-- Check for consistency between vertical coordinates in dynamic
3062	!-- driver and numeric grid.
3063	!-- Please note, depending on compiler options both may be
3064	!-- equal up to a certain threshold, and differences between
3065	!-- the numeric grid and vertical coordinate in the driver can built-
3066	!-- up to 10E-1-10E-0 m. For this reason, the check is performed not
3067	!-- for exactly matching values.
3068	IF ( ANY( ABS( zu(1:nzt) - init_3d%zu_atmos(1:init_3d%nzu) ) &
3069	> 10E-1 ) .OR. &
3070	ANY( ABS( zw(1:nzt-1) - init_3d%zw_atmos(1:init_3d%nzw) ) &
3071	> 10E-1 ) ) THEN
3072	message_string = 'Vertical grid in dynamic driver does not '// &
3073	'match the numeric grid.'
3074	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
3075	ENDIF
3076	!
3077	!-- Read initial geostrophic wind components at
3078	!-- t = 0 (index 1 in file).
3079	IF ( check_existence( var_names, 'ls_forcing_ug' ) ) THEN
3080	ALLOCATE( init_3d%ug_init(nzb:nzt+1) )
3081	init_3d%ug_init = 0.0_wp
3082
3083	CALL get_variable_pr( id_dynamic, 'ls_forcing_ug', 1, &
3084	init_3d%ug_init(1:nzt) )
3085	!
3086	!-- Set top-boundary condition (Neumann)
3087	init_3d%ug_init(nzt+1) = init_3d%ug_init(nzt)
3088
3089	init_3d%from_file_ug = .TRUE.
3090	ELSE
3091	init_3d%from_file_ug = .FALSE.
3092	ENDIF
3093	IF ( check_existence( var_names, 'ls_forcing_vg' ) ) THEN
3094	ALLOCATE( init_3d%vg_init(nzb:nzt+1) )
3095	init_3d%vg_init = 0.0_wp
3096
3097	CALL get_variable_pr( id_dynamic, 'ls_forcing_vg', 1, &
3098	init_3d%vg_init(1:nzt) )
3099	!
3100	!-- Set top-boundary condition (Neumann)
3101	init_3d%vg_init(nzt+1) = init_3d%vg_init(nzt)
3102
3103	init_3d%from_file_vg = .TRUE.
3104	ELSE
3105	init_3d%from_file_vg = .FALSE.
3106	ENDIF
3107	!
3108	!-- Read inital 3D data of u, v, w, pt and q,
3109	!-- derived from COSMO model. Read PE-wise yz-slices.
3110	!-- Please note, the u-, v- and w-component are defined on different
3111	!-- grids with one element less in the x-, y-,
3112	!-- and z-direction, respectively. Hence, reading is subdivided
3113	!-- into separate loops.
3114	!-- Read u-component
3115	IF ( check_existence( var_names, 'init_atmosphere_u' ) ) THEN
3116	!
3117	!-- Read attributes for the fill value and level-of-detail
3118	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_u, &
3119	.FALSE., 'init_atmosphere_u' )
3120	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_u, &
3121	.FALSE., 'init_atmosphere_u' )
3122	!
3123	!-- level-of-detail 1 - read initialization profile
3124	IF ( init_3d%lod_u == 1 ) THEN
3125	ALLOCATE( init_3d%u_init(nzb:nzt+1) )
3126	init_3d%u_init = 0.0_wp
3127
3128	CALL get_variable( id_dynamic, 'init_atmosphere_u', &
3129	init_3d%u_init(nzb+1:nzt) )
3130	!
3131	!-- Set top-boundary condition (Neumann)
3132	init_3d%u_init(nzt+1) = init_3d%u_init(nzt)
3133	!
3134	!-- level-of-detail 2 - read 3D initialization data
3135	ELSEIF ( init_3d%lod_u == 2 ) THEN
3136	CALL get_variable( id_dynamic, 'init_atmosphere_u', &
3137	u(nzb+1:nzt,nys:nyn,nxlu:nxr), &
3138	nxlu, nys+1, nzb+1, &
3139	nxr-nxlu+1, nyn-nys+1, init_3d%nzu, &
3140	dynamic_3d )
3141	!
3142	!-- Set value at leftmost model grid point nxl = 0. This is because
3143	!-- Inifor provides data only from 1:nx-1 since it assumes non-cyclic
3144	!-- conditions.
3145	IF ( nxl == 0 ) &
3146	u(nzb+1:nzt,nys:nyn,nxl) = u(nzb+1:nzt,nys:nyn,nxlu)
3147	!
3148	!-- Set bottom and top-boundary
3149	u(nzb,:,:) = u(nzb+1,:,:)
3150	u(nzt+1,:,:) = u(nzt,:,:)
3151
3152	ENDIF
3153	init_3d%from_file_u = .TRUE.
3154	ELSE
3155	message_string = 'Missing initial data for u-component'
3156	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3157	ENDIF
3158	!
3159	!-- Read v-component
3160	IF ( check_existence( var_names, 'init_atmosphere_v' ) ) THEN
3161	!
3162	!-- Read attributes for the fill value and level-of-detail
3163	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_v, &
3164	.FALSE., 'init_atmosphere_v' )
3165	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_v, &
3166	.FALSE., 'init_atmosphere_v' )
3167	!
3168	!-- level-of-detail 1 - read initialization profile
3169	IF ( init_3d%lod_v == 1 ) THEN
3170	ALLOCATE( init_3d%v_init(nzb:nzt+1) )
3171	init_3d%v_init = 0.0_wp
3172
3173	CALL get_variable( id_dynamic, 'init_atmosphere_v', &
3174	init_3d%v_init(nzb+1:nzt) )
3175	!
3176	!-- Set top-boundary condition (Neumann)
3177	init_3d%v_init(nzt+1) = init_3d%v_init(nzt)
3178	!
3179	!-- level-of-detail 2 - read 3D initialization data
3180	ELSEIF ( init_3d%lod_v == 2 ) THEN
3181
3182	CALL get_variable( id_dynamic, 'init_atmosphere_v', &
3183	v(nzb+1:nzt,nysv:nyn,nxl:nxr), &
3184	nxl+1, nysv, nzb+1, &
3185	nxr-nxl+1, nyn-nysv+1, init_3d%nzu, &
3186	dynamic_3d )
3187	!
3188	!-- Set value at southmost model grid point nys = 0. This is because
3189	!-- Inifor provides data only from 1:ny-1 since it assumes non-cyclic
3190	!-- conditions.
3191	IF ( nys == 0 ) &
3192	v(nzb+1:nzt,nys,nxl:nxr) = v(nzb+1:nzt,nysv,nxl:nxr)
3193	!
3194	!-- Set bottom and top-boundary
3195	v(nzb,:,:) = v(nzb+1,:,:)
3196	v(nzt+1,:,:) = v(nzt,:,:)
3197
3198	ENDIF
3199	init_3d%from_file_v = .TRUE.
3200	ELSE
3201	message_string = 'Missing initial data for v-component'
3202	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3203	ENDIF
3204	!
3205	!-- Read w-component
3206	IF ( check_existence( var_names, 'init_atmosphere_w' ) ) THEN
3207	!
3208	!-- Read attributes for the fill value and level-of-detail
3209	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_w, &
3210	.FALSE., 'init_atmosphere_w' )
3211	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_w, &
3212	.FALSE., 'init_atmosphere_w' )
3213	!
3214	!-- level-of-detail 1 - read initialization profile
3215	IF ( init_3d%lod_w == 1 ) THEN
3216	ALLOCATE( init_3d%w_init(nzb:nzt+1) )
3217	init_3d%w_init = 0.0_wp
3218
3219	CALL get_variable( id_dynamic, 'init_atmosphere_w', &
3220	init_3d%w_init(nzb+1:nzt-1) )
3221	!
3222	!-- Set top-boundary condition (Neumann)
3223	init_3d%w_init(nzt:nzt+1) = init_3d%w_init(nzt-1)
3224	!
3225	!-- level-of-detail 2 - read 3D initialization data
3226	ELSEIF ( init_3d%lod_w == 2 ) THEN
3227
3228	CALL get_variable( id_dynamic, 'init_atmosphere_w', &
3229	w(nzb+1:nzt-1,nys:nyn,nxl:nxr), &
3230	nxl+1, nys+1, nzb+1, &
3231	nxr-nxl+1, nyn-nys+1, init_3d%nzw, &
3232	dynamic_3d )
3233	!
3234	!-- Set bottom and top-boundary
3235	w(nzb,:,:) = 0.0_wp
3236	w(nzt,:,:) = w(nzt-1,:,:)
3237	w(nzt+1,:,:) = w(nzt-1,:,:)
3238
3239	ENDIF
3240	init_3d%from_file_w = .TRUE.
3241	ELSE
3242	message_string = 'Missing initial data for w-component'
3243	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3244	ENDIF
3245	!
3246	!-- Read potential temperature
3247	IF ( .NOT. neutral ) THEN
3248	IF ( check_existence( var_names, 'init_atmosphere_pt' ) ) THEN
3249	!
3250	!-- Read attributes for the fill value and level-of-detail
3251	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_pt, &
3252	.FALSE., 'init_atmosphere_pt' )
3253	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_pt, &
3254	.FALSE., 'init_atmosphere_pt' )
3255	!
3256	!-- level-of-detail 1 - read initialization profile
3257	IF ( init_3d%lod_pt == 1 ) THEN
3258	ALLOCATE( init_3d%pt_init(nzb:nzt+1) )
3259
3260	CALL get_variable( id_dynamic, 'init_atmosphere_pt', &
3261	init_3d%pt_init(nzb+1:nzt) )
3262	!
3263	!-- Set Neumann top and surface boundary condition for initial
3264	!-- profil
3265	init_3d%pt_init(nzb) = init_3d%pt_init(nzb+1)
3266	init_3d%pt_init(nzt+1) = init_3d%pt_init(nzt)
3267	!
3268	!-- level-of-detail 2 - read 3D initialization data
3269	ELSEIF ( init_3d%lod_pt == 2 ) THEN
3270
3271	CALL get_variable( id_dynamic, 'init_atmosphere_pt', &
3272	pt(nzb+1:nzt,nys:nyn,nxl:nxr), &
3273	nxl+1, nys+1, nzb+1, &
3274	nxr-nxl+1, nyn-nys+1, init_3d%nzu, &
3275	dynamic_3d )
3276
3277	!
3278	!-- Set bottom and top-boundary
3279	pt(nzb,:,:) = pt(nzb+1,:,:)
3280	pt(nzt+1,:,:) = pt(nzt,:,:)
3281
3282	ENDIF
3283	init_3d%from_file_pt = .TRUE.
3284	ELSE
3285	message_string = 'Missing initial data for ' // &
3286	'potential temperature'
3287	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3288	ENDIF
3289	ENDIF
3290	!
3291	!-- Read mixing ratio
3292	IF ( humidity ) THEN
3293	IF ( check_existence( var_names, 'init_atmosphere_qv' ) ) THEN
3294	!
3295	!-- Read attributes for the fill value and level-of-detail
3296	CALL get_attribute( id_dynamic, char_fill, init_3d%fill_q, &
3297	.FALSE., 'init_atmosphere_qv' )
3298	CALL get_attribute( id_dynamic, char_lod, init_3d%lod_q, &
3299	.FALSE., 'init_atmosphere_qv' )
3300	!
3301	!-- level-of-detail 1 - read initialization profile
3302	IF ( init_3d%lod_q == 1 ) THEN
3303	ALLOCATE( init_3d%q_init(nzb:nzt+1) )
3304
3305	CALL get_variable( id_dynamic, 'init_atmosphere_qv', &
3306	init_3d%q_init(nzb+1:nzt) )
3307	!
3308	!-- Set bottom and top boundary condition (Neumann)
3309	init_3d%q_init(nzb) = init_3d%q_init(nzb+1)
3310	init_3d%q_init(nzt+1) = init_3d%q_init(nzt)
3311	!
3312	!-- level-of-detail 2 - read 3D initialization data
3313	ELSEIF ( init_3d%lod_q == 2 ) THEN
3314
3315	CALL get_variable( id_dynamic, 'init_atmosphere_qv', &
3316	q(nzb+1:nzt,nys:nyn,nxl:nxr), &
3317	nxl+1, nys+1, nzb+1, &
3318	nxr-nxl+1, nyn-nys+1, init_3d%nzu, &
3319	dynamic_3d )
3320
3321	!
3322	!-- Set bottom and top-boundary
3323	q(nzb,:,:) = q(nzb+1,:,:)
3324	q(nzt+1,:,:) = q(nzt,:,:)
3325
3326	ENDIF
3327	init_3d%from_file_q = .TRUE.
3328	ELSE
3329	message_string = 'Missing initial data for ' // &
3330	'mixing ratio'
3331	CALL message( 'netcdf_data_input_mod', 'PA0544', 1, 2, 0, 6, 0 )
3332	ENDIF
3333	ENDIF
3334	!
3335	!-- Close input file
3336	CALL close_input_file( id_dynamic )
3337	#endif
3338	!
3339	!-- End of CPU measurement
3340	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'stop' )
3341	!
3342	!-- Finally, check if the input data has any fill values. Please note,
3343	!-- checks depend on the LOD of the input data.
3344	IF ( init_3d%from_file_u ) THEN
3345	check_passed = .TRUE.
3346	IF ( init_3d%lod_u == 1 ) THEN
3347	IF ( ANY( init_3d%u_init(nzb+1:nzt+1) == init_3d%fill_u ) ) &
3348	check_passed = .FALSE.
3349	ELSEIF ( init_3d%lod_u == 2 ) THEN
3350	IF ( ANY( u(nzb+1:nzt+1,nys:nyn,nxlu:nxr) == init_3d%fill_u ) ) &
3351	check_passed = .FALSE.
3352	ENDIF
3353	IF ( .NOT. check_passed ) THEN
3354	message_string = 'NetCDF input for init_atmosphere_u must ' // &
3355	'not contain any _FillValues'
3356	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3357	ENDIF
3358	ENDIF
3359
3360	IF ( init_3d%from_file_v ) THEN
3361	check_passed = .TRUE.
3362	IF ( init_3d%lod_v == 1 ) THEN
3363	IF ( ANY( init_3d%v_init(nzb+1:nzt+1) == init_3d%fill_v ) ) &
3364	check_passed = .FALSE.
3365	ELSEIF ( init_3d%lod_v == 2 ) THEN
3366	IF ( ANY( v(nzb+1:nzt+1,nysv:nyn,nxl:nxr) == init_3d%fill_v ) ) &
3367	check_passed = .FALSE.
3368	ENDIF
3369	IF ( .NOT. check_passed ) THEN
3370	message_string = 'NetCDF input for init_atmosphere_v must ' // &
3371	'not contain any _FillValues'
3372	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3373	ENDIF
3374	ENDIF
3375
3376	IF ( init_3d%from_file_w ) THEN
3377	check_passed = .TRUE.
3378	IF ( init_3d%lod_w == 1 ) THEN
3379	IF ( ANY( init_3d%w_init(nzb+1:nzt) == init_3d%fill_w ) ) &
3380	check_passed = .FALSE.
3381	ELSEIF ( init_3d%lod_w == 2 ) THEN
3382	IF ( ANY( w(nzb+1:nzt,nys:nyn,nxl:nxr) == init_3d%fill_w ) ) &
3383	check_passed = .FALSE.
3384	ENDIF
3385	IF ( .NOT. check_passed ) THEN
3386	message_string = 'NetCDF input for init_atmosphere_w must ' // &
3387	'not contain any _FillValues'
3388	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3389	ENDIF
3390	ENDIF
3391
3392	IF ( init_3d%from_file_pt ) THEN
3393	check_passed = .TRUE.
3394	IF ( init_3d%lod_pt == 1 ) THEN
3395	IF ( ANY( init_3d%pt_init(nzb+1:nzt+1) == init_3d%fill_pt ) ) &
3396	check_passed = .FALSE.
3397	ELSEIF ( init_3d%lod_pt == 2 ) THEN
3398	IF ( ANY( pt(nzb+1:nzt+1,nys:nyn,nxl:nxr) == init_3d%fill_pt ) ) &
3399	check_passed = .FALSE.
3400	ENDIF
3401	IF ( .NOT. check_passed ) THEN
3402	message_string = 'NetCDF input for init_atmosphere_pt must ' // &
3403	'not contain any _FillValues'
3404	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3405	ENDIF
3406	ENDIF
3407
3408	IF ( init_3d%from_file_q ) THEN
3409	check_passed = .TRUE.
3410	IF ( init_3d%lod_q == 1 ) THEN
3411	IF ( ANY( init_3d%q_init(nzb+1:nzt+1) == init_3d%fill_q ) ) &
3412	check_passed = .FALSE.
3413	ELSEIF ( init_3d%lod_q == 2 ) THEN
3414	IF ( ANY( q(nzb+1:nzt+1,nys:nyn,nxl:nxr) == init_3d%fill_q ) ) &
3415	check_passed = .FALSE.
3416	ENDIF
3417	IF ( .NOT. check_passed ) THEN
3418	message_string = 'NetCDF input for init_atmosphere_q must ' // &
3419	'not contain any _FillValues'
3420	CALL message( 'netcdf_data_input_mod', 'PA0545', 2, 2, 0, 6, 0 )
3421	ENDIF
3422	ENDIF
3423	!
3424	!-- Workaround for cyclic conditions. Please see above for further explanation.
3425	IF ( bc_lr_cyc .AND. nxl == 0 ) nxlu = nxl
3426	IF ( bc_ns_cyc .AND. nys == 0 ) nysv = nys
3427
3428	END SUBROUTINE netcdf_data_input_init_3d
3429
3430	!------------------------------------------------------------------------------!
3431	! Description:
3432	! ------------
3433	!> Reads initialization data of u, v, w, pt, q, geostrophic wind components,
3434	!> as well as soil moisture and soil temperature, derived from larger-scale
3435	!> model (COSMO) by Inifor.
3436	!------------------------------------------------------------------------------!
3437	SUBROUTINE netcdf_data_input_init_lsm
3438
3439	USE control_parameters, &
3440	ONLY: message_string
3441
3442	USE indices, &
3443	ONLY: nx, nxl, nxr, ny, nyn, nys
3444
3445	IMPLICIT NONE
3446
3447	CHARACTER(LEN=100), DIMENSION(:), ALLOCATABLE :: var_names
3448
3449	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
3450	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
3451
3452	!
3453	!-- Skip routine if no input file with dynamic input data is available.
3454	IF ( .NOT. input_pids_dynamic ) RETURN
3455	!
3456	!-- CPU measurement
3457	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'start' )
3458
3459	#if defined ( __netcdf )
3460	!
3461	!-- Open file in read-only mode
3462	CALL open_read_file( TRIM( input_file_dynamic ) // &
3463	TRIM( coupling_char ), id_dynamic )
3464
3465	!
3466	!-- At first, inquire all variable names.
3467	CALL inquire_num_variables( id_dynamic, num_vars )
3468	!
3469	!-- Allocate memory to store variable names.
3470	ALLOCATE( var_names(1:num_vars) )
3471	CALL inquire_variable_names( id_dynamic, var_names )
3472	!
3473	!-- Read vertical dimension for soil depth.
3474	IF ( check_existence( var_names, 'zsoil' ) ) &
3475	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nzs,&
3476	'zsoil' )
3477	!
3478	!-- Read also the horizontal dimensions required for soil initialization.
3479	!-- Please note, in case of non-nested runs or in case of root domain,
3480	!-- these data is already available, but will be read again for the sake
3481	!-- of clearness.
3482	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%nx, &
3483	'x' )
3484	CALL netcdf_data_input_get_dimension_length( id_dynamic, init_3d%ny, &
3485	'y' )
3486	!
3487	!-- Check for correct horizontal and vertical dimension. Please note,
3488	!-- in case of non-nested runs or in case of root domain, these checks
3489	!-- are already performed
3490	IF ( init_3d%nx-1 /= nx .OR. init_3d%ny-1 /= ny ) THEN
3491	message_string = 'Number of inifor horizontal grid points '// &
3492	'does not match the number of numeric grid points.'
3493	CALL message( 'netcdf_data_input_mod', 'PA0543', 1, 2, 0, 6, 0 )
3494	ENDIF
3495	!
3496	!-- Read vertical dimensions. Later, these are required for eventual
3497	!-- inter- and extrapolations of the initialization data.
3498	IF ( check_existence( var_names, 'zsoil' ) ) THEN
3499	ALLOCATE( init_3d%z_soil(1:init_3d%nzs) )
3500	CALL get_variable( id_dynamic, 'zsoil', init_3d%z_soil )
3501	ENDIF
3502	!
3503	!-- Read initial data for soil moisture
3504	IF ( check_existence( var_names, 'init_soil_m' ) ) THEN
3505	!
3506	!-- Read attributes for the fill value and level-of-detail
3507	CALL get_attribute( id_dynamic, char_fill, &
3508	init_3d%fill_msoil, &
3509	.FALSE., 'init_soil_m' )
3510	CALL get_attribute( id_dynamic, char_lod, &
3511	init_3d%lod_msoil, &
3512	.FALSE., 'init_soil_m' )
3513	!
3514	!-- level-of-detail 1 - read initialization profile
3515	IF ( init_3d%lod_msoil == 1 ) THEN
3516	ALLOCATE( init_3d%msoil_1d(0:init_3d%nzs-1) )
3517
3518	CALL get_variable( id_dynamic, 'init_soil_m', &
3519	init_3d%msoil_1d(0:init_3d%nzs-1) )
3520	!
3521	!-- level-of-detail 2 - read 3D initialization data
3522	ELSEIF ( init_3d%lod_msoil == 2 ) THEN
3523	ALLOCATE ( init_3d%msoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr) )
3524
3525	CALL get_variable( id_dynamic, 'init_soil_m', &
3526	init_3d%msoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr),&
3527	nxl, nxr, nys, nyn, 0, init_3d%nzs-1 )
3528
3529	ENDIF
3530	init_3d%from_file_msoil = .TRUE.
3531	ENDIF
3532	!
3533	!-- Read soil temperature
3534	IF ( check_existence( var_names, 'init_soil_t' ) ) THEN
3535	!
3536	!-- Read attributes for the fill value and level-of-detail
3537	CALL get_attribute( id_dynamic, char_fill, &
3538	init_3d%fill_tsoil, &
3539	.FALSE., 'init_soil_t' )
3540	CALL get_attribute( id_dynamic, char_lod, &
3541	init_3d%lod_tsoil, &
3542	.FALSE., 'init_soil_t' )
3543	!
3544	!-- level-of-detail 1 - read initialization profile
3545	IF ( init_3d%lod_tsoil == 1 ) THEN
3546	ALLOCATE( init_3d%tsoil_1d(0:init_3d%nzs-1) )
3547
3548	CALL get_variable( id_dynamic, 'init_soil_t', &
3549	init_3d%tsoil_1d(0:init_3d%nzs-1) )
3550
3551	!
3552	!-- level-of-detail 2 - read 3D initialization data
3553	ELSEIF ( init_3d%lod_tsoil == 2 ) THEN
3554	ALLOCATE ( init_3d%tsoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr) )
3555
3556	CALL get_variable( id_dynamic, 'init_soil_t', &
3557	init_3d%tsoil_3d(0:init_3d%nzs-1,nys:nyn,nxl:nxr),&
3558	nxl, nxr, nys, nyn, 0, init_3d%nzs-1 )
3559	ENDIF
3560	init_3d%from_file_tsoil = .TRUE.
3561	ENDIF
3562	!
3563	!-- Close input file
3564	CALL close_input_file( id_dynamic )
3565	#endif
3566	!
3567	!-- End of CPU measurement
3568	CALL cpu_log( log_point_s(85), 'NetCDF input init', 'stop' )
3569
3570	END SUBROUTINE netcdf_data_input_init_lsm
3571
3572	!------------------------------------------------------------------------------!
3573	! Description:
3574	! ------------
3575	!> Reads data at lateral and top boundaries derived from larger-scale model
3576	!> (COSMO) by Inifor.
3577	!------------------------------------------------------------------------------!
3578	SUBROUTINE netcdf_data_input_offline_nesting
3579
3580	USE control_parameters, &
3581	ONLY: bc_dirichlet_l, bc_dirichlet_n, bc_dirichlet_r, &
3582	bc_dirichlet_s, humidity, neutral, nesting_offline, &
3583	time_since_reference_point
3584
3585	USE indices, &
3586	ONLY: nxl, nxlu, nxr, nyn, nys, nysv, nzb, nzt
3587
3588	IMPLICIT NONE
3589
3590	INTEGER(iwp) :: id_dynamic !< NetCDF id of dynamic input file
3591	INTEGER(iwp) :: num_vars !< number of variables in netcdf input file
3592	INTEGER(iwp) :: t !< running index time dimension
3593
3594	nest_offl%from_file = MERGE( .TRUE., .FALSE., input_pids_dynamic )
3595	!
3596	!-- Skip input if no forcing from larger-scale models is applied.
3597	IF ( .NOT. nesting_offline ) RETURN
3598
3599	!
3600	!-- CPU measurement
3601	CALL cpu_log( log_point_s(86), 'NetCDF input forcing', 'start' )
3602
3603	#if defined ( __netcdf )
3604	!
3605	!-- Open file in read-only mode
3606	CALL open_read_file( TRIM( input_file_dynamic ) // &
3607	TRIM( coupling_char ), id_dynamic )
3608	!
3609	!-- Initialize INIFOR forcing.
3610	IF ( .NOT. nest_offl%init ) THEN
3611	!
3612	!-- At first, inquire all variable names.
3613	CALL inquire_num_variables( id_dynamic, num_vars )
3614	!
3615	!-- Allocate memory to store variable names.
3616	ALLOCATE( nest_offl%var_names(1:num_vars) )
3617	CALL inquire_variable_names( id_dynamic, nest_offl%var_names )
3618	!
3619	!-- Read time dimension, allocate memory and finally read time array
3620	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3621	nest_offl%nt, 'time' )
3622
3623	IF ( check_existence( nest_offl%var_names, 'time' ) ) THEN
3624	ALLOCATE( nest_offl%time(0:nest_offl%nt-1) )
3625	CALL get_variable( id_dynamic, 'time', nest_offl%time )
3626	ENDIF
3627	!
3628	!-- Read vertical dimension of scalar und w grid
3629	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3630	nest_offl%nzu, 'z' )
3631	CALL netcdf_data_input_get_dimension_length( id_dynamic, &
3632	nest_offl%nzw, 'zw' )
3633
3634	IF ( check_existence( nest_offl%var_names, 'z' ) ) THEN
3635	ALLOCATE( nest_offl%zu_atmos(1:nest_offl%nzu) )
3636	CALL get_variable( id_dynamic, 'z', nest_offl%zu_atmos )
3637	ENDIF
3638	IF ( check_existence( nest_offl%var_names, 'zw' ) ) THEN
3639	ALLOCATE( nest_offl%zw_atmos(1:nest_offl%nzw) )
3640	CALL get_variable( id_dynamic, 'zw', nest_offl%zw_atmos )
3641	ENDIF
3642
3643	!
3644	!-- Read surface pressure
3645	IF ( check_existence( nest_offl%var_names, &
3646	'surface_forcing_surface_pressure' ) ) THEN
3647	ALLOCATE( nest_offl%surface_pressure(0:nest_offl%nt-1) )
3648	CALL get_variable( id_dynamic, &
3649	'surface_forcing_surface_pressure', &
3650	nest_offl%surface_pressure )
3651	ENDIF
3652	!
3653	!-- Set control flag to indicate that initialization is already done
3654	nest_offl%init = .TRUE.
3655
3656	ENDIF
3657
3658	!
3659	!-- Obtain time index for current input starting at 0.
3660	!-- @todo: At the moment INIFOR and simulated time correspond
3661	!-- to each other. If required, adjust to daytime.
3662	nest_offl%tind = MINLOC( ABS( nest_offl%time - &
3663	time_since_reference_point ), DIM = 1 ) &
3664	- 1
3665	nest_offl%tind_p = nest_offl%tind + 1
3666	!
3667	!-- Read geostrophic wind components
3668	DO t = nest_offl%tind, nest_offl%tind_p
3669	CALL get_variable_pr( id_dynamic, 'ls_forcing_ug', t+1, &
3670	nest_offl%ug(t-nest_offl%tind,nzb+1:nzt) )
3671	CALL get_variable_pr( id_dynamic, 'ls_forcing_vg', t+1, &
3672	nest_offl%vg(t-nest_offl%tind,nzb+1:nzt) )
3673	ENDDO
3674	!
3675	!-- Read data at lateral and top boundaries. Please note, at left and
3676	!-- right domain boundary, yz-layers are read for u, v, w, pt and q.
3677	!-- For the v-component, the data starts at nysv, while for the other
3678	!-- quantities the data starts at nys. This is equivalent at the north
3679	!-- and south domain boundary for the u-component.
3680	!-- Further, lateral data is not accessed by parallel IO, indicated by the
3681	!-- last passed flag in the subroutine get_variable(). This is because
3682	!-- not every PE participates in this collective blocking read operation.
3683	IF ( bc_dirichlet_l ) THEN
3684	CALL get_variable( id_dynamic, 'ls_forcing_left_u', &
3685	nest_offl%u_left(0:1,nzb+1:nzt,nys:nyn), &
3686	nys+1, nzb+1, nest_offl%tind+1, &
3687	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3688
3689	CALL get_variable( id_dynamic, 'ls_forcing_left_v', &
3690	nest_offl%v_left(0:1,nzb+1:nzt,nysv:nyn), &
3691	nysv, nzb+1, nest_offl%tind+1, &
3692	nyn-nysv+1, nest_offl%nzu, 2, .FALSE. )
3693
3694	CALL get_variable( id_dynamic, 'ls_forcing_left_w', &
3695	nest_offl%w_left(0:1,nzb+1:nzt-1,nys:nyn), &
3696	nys+1, nzb+1, nest_offl%tind+1, &
3697	nyn-nys+1, nest_offl%nzw, 2, .FALSE. )
3698
3699	IF ( .NOT. neutral ) THEN
3700	CALL get_variable( id_dynamic, 'ls_forcing_left_pt', &
3701	nest_offl%pt_left(0:1,nzb+1:nzt,nys:nyn), &
3702	nys+1, nzb+1, nest_offl%tind+1, &
3703	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3704	ENDIF
3705
3706	IF ( humidity ) THEN
3707	CALL get_variable( id_dynamic, 'ls_forcing_left_qv', &
3708	nest_offl%q_left(0:1,nzb+1:nzt,nys:nyn), &
3709	nys+1, nzb+1, nest_offl%tind+1, &
3710	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3711	ENDIF
3712
3713	ENDIF
3714
3715	IF ( bc_dirichlet_r ) THEN
3716	CALL get_variable( id_dynamic, 'ls_forcing_right_u', &
3717	nest_offl%u_right(0:1,nzb+1:nzt,nys:nyn), &
3718	nys+1, nzb+1, nest_offl%tind+1, &
3719	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3720
3721	CALL get_variable( id_dynamic, 'ls_forcing_right_v', &
3722	nest_offl%v_right(0:1,nzb+1:nzt,nysv:nyn), &
3723	nysv, nzb+1, nest_offl%tind+1, &
3724	nyn-nysv+1, nest_offl%nzu, 2, .FALSE. )
3725
3726	CALL get_variable( id_dynamic, 'ls_forcing_right_w', &
3727	nest_offl%w_right(0:1,nzb+1:nzt-1,nys:nyn), &
3728	nys+1, nzb+1, nest_offl%tind+1, &
3729	nyn-nys+1, nest_offl%nzw, 2, .FALSE. )
3730
3731	IF ( .NOT. neutral ) THEN
3732	CALL get_variable( id_dynamic, 'ls_forcing_right_pt', &
3733	nest_offl%pt_right(0:1,nzb+1:nzt,nys:nyn), &
3734	nys+1, nzb+1, nest_offl%tind+1, &
3735	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3736	ENDIF
3737	IF ( humidity ) THEN
3738	CALL get_variable( id_dynamic, 'ls_forcing_right_qv', &
3739	nest_offl%q_right(0:1,nzb+1:nzt,nys:nyn), &
3740	nys+1, nzb+1, nest_offl%tind+1, &
3741	nyn-nys+1, nest_offl%nzu, 2, .FALSE. )
3742	ENDIF
3743	ENDIF
3744
3745	IF ( bc_dirichlet_n ) THEN
3746
3747	CALL get_variable( id_dynamic, 'ls_forcing_north_u', &
3748	nest_offl%u_north(0:1,nzb+1:nzt,nxlu:nxr), &
3749	nxlu, nzb+1, nest_offl%tind+1, &
3750	nxr-nxlu+1, nest_offl%nzu, 2, .FALSE. )
3751
3752	CALL get_variable( id_dynamic, 'ls_forcing_north_v', &
3753	nest_offl%v_north(0:1,nzb+1:nzt,nxl:nxr), &
3754	nxl+1, nzb+1, nest_offl%tind+1, &
3755	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3756
3757	CALL get_variable( id_dynamic, 'ls_forcing_north_w', &
3758	nest_offl%w_north(0:1,nzb+1:nzt-1,nxl:nxr), &
3759	nxl+1, nzb+1, nest_offl%tind+1, &
3760	nxr-nxl+1, nest_offl%nzw, 2, .FALSE. )
3761
3762	IF ( .NOT. neutral ) THEN
3763	CALL get_variable( id_dynamic, 'ls_forcing_north_pt', &
3764	nest_offl%pt_north(0:1,nzb+1:nzt,nxl:nxr), &
3765	nxl+1, nzb+1, nest_offl%tind+1, &
3766	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3767	ENDIF
3768	IF ( humidity ) THEN
3769	CALL get_variable( id_dynamic, 'ls_forcing_north_qv', &
3770	nest_offl%q_north(0:1,nzb+1:nzt,nxl:nxr), &
3771	nxl+1, nzb+1, nest_offl%tind+1, &
3772	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3773	ENDIF
3774	ENDIF
3775
3776	IF ( bc_dirichlet_s ) THEN
3777	CALL get_variable( id_dynamic, 'ls_forcing_south_u', &
3778	nest_offl%u_south(0:1,nzb+1:nzt,nxlu:nxr), &
3779	nxlu, nzb+1, nest_offl%tind+1, &
3780	nxr-nxlu+1, nest_offl%nzu, 2, .FALSE. )
3781
3782	CALL get_variable( id_dynamic, 'ls_forcing_south_v', &
3783	nest_offl%v_south(0:1,nzb+1:nzt,nxl:nxr), &
3784	nxl+1, nzb+1, nest_offl%tind+1, &
3785	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3786
3787	CALL get_variable( id_dynamic, 'ls_forcing_south_w', &
3788	nest_offl%w_south(0:1,nzb+1:nzt-1,nxl:nxr), &
3789	nxl+1, nzb+1, nest_offl%tind+1, &
3790	nxr-nxl+1, nest_offl%nzw, 2, .FALSE. )
3791
3792	IF ( .NOT. neutral ) THEN
3793	CALL get_variable( id_dynamic, 'ls_forcing_south_pt', &
3794	nest_offl%pt_south(0:1,nzb+1:nzt,nxl:nxr), &
3795	nxl+1, nzb+1, nest_offl%tind+1, &
3796	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3797	ENDIF
3798	IF ( humidity ) THEN
3799	CALL get_variable( id_dynamic, 'ls_forcing_south_qv', &
3800	nest_offl%q_south(0:1,nzb+1:nzt,nxl:nxr), &
3801	nxl+1, nzb+1, nest_offl%tind+1, &
3802	nxr-nxl+1, nest_offl%nzu, 2, .FALSE. )
3803	ENDIF
3804	ENDIF
3805
3806	!
3807	!-- Top boundary
3808	CALL get_variable( id_dynamic, 'ls_forcing_top_u', &
3809	nest_offl%u_top(0:1,nys:nyn,nxlu:nxr), &
3810	nxlu, nys+1, nest_offl%tind+1, &
3811	nxr-nxlu+1, nyn-nys+1, 2, .TRUE. )
3812
3813	CALL get_variable( id_dynamic, 'ls_forcing_top_v', &
3814	nest_offl%v_top(0:1,nysv:nyn,nxl:nxr), &
3815	nxl+1, nysv, nest_offl%tind+1, &
3816	nxr-nxl+1, nyn-nysv+1, 2, .TRUE. )
3817
3818	CALL get_variable( id_dynamic, 'ls_forcing_top_w', &
3819	nest_offl%w_top(0:1,nys:nyn,nxl:nxr), &
3820	nxl+1, nys+1, nest_offl%tind+1, &
3821	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3822
3823	IF ( .NOT. neutral ) THEN
3824	CALL get_variable( id_dynamic, 'ls_forcing_top_pt', &
3825	nest_offl%pt_top(0:1,nys:nyn,nxl:nxr), &
3826	nxl+1, nys+1, nest_offl%tind+1, &
3827	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3828	ENDIF
3829	IF ( humidity ) THEN
3830	CALL get_variable( id_dynamic, 'ls_forcing_top_qv', &
3831	nest_offl%q_top(0:1,nys:nyn,nxl:nxr), &
3832	nxl+1, nys+1, nest_offl%tind+1, &
3833	nxr-nxl+1, nyn-nys+1, 2, .TRUE. )
3834	ENDIF
3835
3836	!
3837	!-- Close input file
3838	CALL close_input_file( id_dynamic )
3839	#endif
3840	!
3841	!-- End of CPU measurement
3842	CALL cpu_log( log_point_s(86), 'NetCDF input forcing', 'stop' )
3843
3844	END SUBROUTINE netcdf_data_input_offline_nesting
3845
3846
3847	!------------------------------------------------------------------------------!
3848	! Description:
3849	! ------------
3850	!> Checks input file for consistency and minimum requirements.
3851	!------------------------------------------------------------------------------!
3852	SUBROUTINE netcdf_data_input_check_dynamic
3853
3854	USE control_parameters, &
3855	ONLY: initializing_actions, message_string, nesting_offline
3856
3857	IMPLICIT NONE
3858
3859	!
3860	!-- In case of forcing, check whether dynamic input file is present
3861	IF ( .NOT. input_pids_dynamic .AND. nesting_offline ) THEN
3862	message_string = 'nesting_offline = .TRUE. requires dynamic ' // &
3863	'input file ' // &
3864	TRIM( input_file_dynamic ) // TRIM( coupling_char )
3865	CALL message( 'netcdf_data_input_mod', 'PA0546', 1, 2, 0, 6, 0 )
3866	ENDIF
3867	!
3868	!-- Dynamic input file must also be present if initialization via inifor is
3869	!-- prescribed.
3870	IF ( .NOT. input_pids_dynamic .AND. &
3871	TRIM( initializing_actions ) == 'inifor' ) THEN
3872	message_string = 'initializing_actions = inifor requires dynamic ' //&
3873	'input file ' // TRIM( input_file_dynamic ) // &
3874	TRIM( coupling_char )
3875	CALL message( 'netcdf_data_input_mod', 'PA0547', 1, 2, 0, 6, 0 )
3876	ENDIF
3877
3878	END SUBROUTINE netcdf_data_input_check_dynamic
3879
3880	!------------------------------------------------------------------------------!
3881	! Description:
3882	! ------------
3883	!> Checks input file for consistency and minimum requirements.
3884	!------------------------------------------------------------------------------!
3885	SUBROUTINE netcdf_data_input_check_static
3886
3887	USE arrays_3d, &
3888	ONLY: zu
3889
3890	USE control_parameters, &
3891	ONLY: land_surface, message_string, urban_surface
3892
3893	USE grid_variables, &
3894	ONLY: dx, dy
3895
3896	USE indices, &
3897	ONLY: nx, nxl, nxr, ny, nyn, nys
3898
3899	IMPLICIT NONE
3900
3901	INTEGER(iwp) :: i !< loop index along x-direction
3902	INTEGER(iwp) :: j !< loop index along y-direction
3903	INTEGER(iwp) :: n_surf !< number of different surface types at given location
3904
3905	LOGICAL :: check_passed !< flag indicating if a check passed
3906
3907	!
3908	!-- Return if no static input file is available
3909	IF ( .NOT. input_pids_static ) RETURN
3910	!
3911	!-- Check whether dimension size in input file matches the model dimensions
3912	IF ( dim_static%nx-1 /= nx .OR. dim_static%ny-1 /= ny ) THEN
3913	message_string = 'Static input file: horizontal dimension in ' // &
3914	'x- and/or y-direction ' // &
3915	'do not match the respective model dimension'
3916	CALL message( 'netcdf_data_input_mod', 'PA0548', 1, 2, 0, 6, 0 )
3917	ENDIF
3918	!
3919	!-- Check if grid spacing of provided input data matches the respective
3920	!-- grid spacing in the model.
3921	IF ( ABS( dim_static%x(1) - dim_static%x(0) - dx ) > 10E-6_wp .OR. &
3922	ABS( dim_static%y(1) - dim_static%y(0) - dy ) > 10E-6_wp ) THEN
3923	message_string = 'Static input file: horizontal grid spacing ' // &
3924	'in x- and/or y-direction ' // &
3925	'do not match the respective model grid spacing.'
3926	CALL message( 'netcdf_data_input_mod', 'PA0549', 1, 2, 0, 6, 0 )
3927	ENDIF
3928	!
3929	!-- Check for correct dimension of surface_fractions, should run from 0-2.
3930	IF ( surface_fraction_f%from_file ) THEN
3931	IF ( surface_fraction_f%nf-1 > 2 ) THEN
3932	message_string = 'nsurface_fraction must not be larger than 3.'
3933	CALL message( 'netcdf_data_input_mod', 'PA0580', 1, 2, 0, 6, 0 )
3934	ENDIF
3935	ENDIF
3936	!
3937	!-- Check orography for fill-values. For the moment, give an error message.
3938	!-- More advanced methods, e.g. a nearest neighbor algorithm as used in GIS
3939	!-- systems might be implemented later.
3940	!-- Please note, if no terrain height is provided, it is set to 0.
3941	IF ( ANY( terrain_height_f%var == terrain_height_f%fill ) ) THEN
3942	message_string = 'NetCDF variable zt is not ' // &
3943	'allowed to have missing data'
3944	CALL message( 'netcdf_data_input_mod', 'PA0550', 2, 2, myid, 6, 0 )
3945	ENDIF
3946	!
3947	!-- Check for negative terrain heights
3948	IF ( ANY( terrain_height_f%var < 0.0_wp ) ) THEN
3949	message_string = 'NetCDF variable zt is not ' // &
3950	'allowed to have negative values'
3951	CALL message( 'netcdf_data_input_mod', 'PA0551', 2, 2, myid, 6, 0 )
3952	ENDIF
3953	!
3954	!-- If 3D buildings are read, check if building information is consistent
3955	!-- to numeric grid.
3956	IF ( buildings_f%from_file ) THEN
3957	IF ( buildings_f%lod == 2 ) THEN
3958	IF ( buildings_f%nz > SIZE( zu ) ) THEN
3959	message_string = 'Reading 3D building data - too much ' // &
3960	'data points along the vertical coordinate.'
3961	CALL message( 'netcdf_data_input_mod', 'PA0552', 2, 2, 0, 6, 0 )
3962	ENDIF
3963
3964	IF ( ANY( ABS( buildings_f%z(0:buildings_f%nz-1) - &
3965	zu(0:buildings_f%nz-1) ) > 1E-6_wp ) ) THEN
3966	message_string = 'Reading 3D building data - vertical ' // &
3967	'coordinate do not match numeric grid.'
3968	CALL message( 'netcdf_data_input_mod', 'PA0553', 2, 2, myid, 6, 0 )
3969	ENDIF
3970	ENDIF
3971	ENDIF
3972
3973	!
3974	!-- Skip further checks concerning buildings and natural surface properties
3975	!-- if no urban surface and land surface model are applied.
3976	IF ( .NOT. land_surface .AND. .NOT. urban_surface ) RETURN
3977	!
3978	!-- Check for minimum requirement of surface-classification data in case
3979	!-- static input file is used.
3980	IF ( ( .NOT. vegetation_type_f%from_file .OR. &
3981	.NOT. pavement_type_f%from_file .OR. &
3982	.NOT. water_type_f%from_file .OR. &
3983	.NOT. soil_type_f%from_file ) .OR. &
3984	( urban_surface .AND. .NOT. building_type_f%from_file ) ) THEN
3985	message_string = 'Minimum requirement for surface classification ' //&
3986	'is not fulfilled. At least ' // &
3987	'vegetation_type, pavement_type, ' // &
3988	'soil_type and water_type are '// &
3989	'required. If urban-surface model is applied, ' // &
3990	'also building_type ist required'
3991	CALL message( 'netcdf_data_input_mod', 'PA0554', 1, 2, 0, 6, 0 )
3992	ENDIF
3993	!
3994	!-- Check for general availability of input variables.
3995	!-- If vegetation_type is 0 at any location, vegetation_pars as well as
3996	!-- root_area_dens_s are required.
3997	IF ( vegetation_type_f%from_file ) THEN
3998	IF ( ANY( vegetation_type_f%var == 0 ) ) THEN
3999	IF ( .NOT. vegetation_pars_f%from_file ) THEN
4000	message_string = 'If vegetation_type = 0 at any location, ' // &
4001	'vegetation_pars is required'
4002	CALL message( 'netcdf_data_input_mod', 'PA0555', 2, 2, -1, 6, 0 )
4003	ENDIF
4004	IF ( .NOT. root_area_density_lsm_f%from_file ) THEN
4005	message_string = 'If vegetation_type = 0 at any location, ' // &
4006	'root_area_dens_s is required'
4007	CALL message( 'netcdf_data_input_mod', 'PA0556', 2, 2, myid, 6, 0 )
4008	ENDIF
4009	ENDIF
4010	ENDIF
4011	!
4012	!-- If soil_type is zero at any location, soil_pars is required.
4013	IF ( soil_type_f%from_file ) THEN
4014	check_passed = .TRUE.
4015	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
4016	IF ( ANY( soil_type_f%var_2d == 0 ) ) THEN
4017	IF ( .NOT. soil_pars_f%from_file ) check_passed = .FALSE.
4018	ENDIF
4019	ELSE
4020	IF ( ANY( soil_type_f%var_3d == 0 ) ) THEN
4021	IF ( .NOT. soil_pars_f%from_file ) check_passed = .FALSE.
4022	ENDIF
4023	ENDIF
4024	IF ( .NOT. check_passed ) THEN
4025	message_string = 'If soil_type = 0 at any location, ' // &
4026	'soil_pars is required'
4027	CALL message( 'netcdf_data_input_mod', 'PA0557', 2, 2, myid, 6, 0 )
4028	ENDIF
4029	ENDIF
4030	!
4031	!-- Buildings require a type in case of urban-surface model.
4032	IF ( buildings_f%from_file .AND. .NOT. building_type_f%from_file ) THEN
4033	message_string = 'If buildings are provided, also building_type ' // &
4034	'is required'
4035	CALL message( 'netcdf_data_input_mod', 'PA0581', 2, 2, myid, 6, 0 )
4036	ENDIF
4037	!
4038	!-- Buildings require an ID.
4039	IF ( buildings_f%from_file .AND. .NOT. building_id_f%from_file ) THEN
4040	message_string = 'If buildings are provided, also building_id ' // &
4041	'is required'
4042	CALL message( 'netcdf_data_input_mod', 'PA0582', 2, 2, myid, 6, 0 )
4043	ENDIF
4044	!
4045	!-- If building_type is zero at any location, building_pars is required.
4046	IF ( building_type_f%from_file ) THEN
4047	IF ( ANY( building_type_f%var == 0 ) ) THEN
4048	IF ( .NOT. building_pars_f%from_file ) THEN
4049	message_string = 'If building_type = 0 at any location, ' // &
4050	'building_pars is required'
4051	CALL message( 'netcdf_data_input_mod', 'PA0558', 2, 2, myid, 6, 0 )
4052	ENDIF
4053	ENDIF
4054	ENDIF
4055	!
4056	!-- If building_type is provided, also building_id is needed (due to the
4057	!-- filtering algorithm).
4058	IF ( building_type_f%from_file .AND. .NOT. building_id_f%from_file ) &
4059	THEN
4060	message_string = 'If building_type is provided, also building_id '// &
4061	'is required'
4062	CALL message( 'netcdf_data_input_mod', 'PA0519', 2, 2, myid, 6, 0 )
4063	ENDIF
4064	!
4065	!-- If albedo_type is zero at any location, albedo_pars is required.
4066	IF ( albedo_type_f%from_file ) THEN
4067	IF ( ANY( albedo_type_f%var == 0 ) ) THEN
4068	IF ( .NOT. albedo_pars_f%from_file ) THEN
4069	message_string = 'If albedo_type = 0 at any location, ' // &
4070	'albedo_pars is required'
4071	CALL message( 'netcdf_data_input_mod', 'PA0559', 2, 2, myid, 6, 0 )
4072	ENDIF
4073	ENDIF
4074	ENDIF
4075	!
4076	!-- If pavement_type is zero at any location, pavement_pars is required.
4077	IF ( pavement_type_f%from_file ) THEN
4078	IF ( ANY( pavement_type_f%var == 0 ) ) THEN
4079	IF ( .NOT. pavement_pars_f%from_file ) THEN
4080	message_string = 'If pavement_type = 0 at any location, ' // &
4081	'pavement_pars is required'
4082	CALL message( 'netcdf_data_input_mod', 'PA0560', 2, 2, myid, 6, 0 )
4083	ENDIF
4084	ENDIF
4085	ENDIF
4086	!
4087	!-- If pavement_type is zero at any location, also pavement_subsurface_pars
4088	!-- is required.
4089	IF ( pavement_type_f%from_file ) THEN
4090	IF ( ANY( pavement_type_f%var == 0 ) ) THEN
4091	IF ( .NOT. pavement_subsurface_pars_f%from_file ) THEN
4092	message_string = 'If pavement_type = 0 at any location, ' // &
4093	'pavement_subsurface_pars is required'
4094	CALL message( 'netcdf_data_input_mod', 'PA0561', 2, 2, myid, 6, 0 )
4095	ENDIF
4096	ENDIF
4097	ENDIF
4098	!
4099	!-- If water_type is zero at any location, water_pars is required.
4100	IF ( water_type_f%from_file ) THEN
4101	IF ( ANY( water_type_f%var == 0 ) ) THEN
4102	IF ( .NOT. water_pars_f%from_file ) THEN
4103	message_string = 'If water_type = 0 at any location, ' // &
4104	'water_pars is required'
4105	CALL message( 'netcdf_data_input_mod', 'PA0562', 2, 2,myid, 6, 0 )
4106	ENDIF
4107	ENDIF
4108	ENDIF
4109	!
4110	!-- Check for local consistency of the input data.
4111	DO i = nxl, nxr
4112	DO j = nys, nyn
4113	!
4114	!-- For each (y,x)-location at least one of the parameters
4115	!-- vegetation_type, pavement_type, building_type, or water_type
4116	!-- must be set to a nonÂmissing value.
4117	IF ( vegetation_type_f%var(j,i) == vegetation_type_f%fill .AND. &
4118	pavement_type_f%var(j,i) == pavement_type_f%fill .AND. &
4119	building_type_f%var(j,i) == building_type_f%fill .AND. &
4120	water_type_f%var(j,i) == water_type_f%fill ) THEN
4121	WRITE( message_string, * ) 'At least one of the parameters '// &
4122	'vegetation_type, pavement_type, ' // &
4123	'building_type, or water_type must be set '// &
4124	'to a non-missing value. Grid point: ', j, i
4125	CALL message( 'netcdf_data_input_mod', 'PA0563', 2, 2, myid, 6, 0 )
4126	ENDIF
4127	!
4128	!-- Note that a soil_type is required for each location (y,x) where
4129	!-- either vegetation_type or pavement_type is a nonÂmissing value.
4130	IF ( ( vegetation_type_f%var(j,i) /= vegetation_type_f%fill .OR. &
4131	pavement_type_f%var(j,i) /= pavement_type_f%fill ) ) THEN
4132	check_passed = .TRUE.
4133	IF ( ALLOCATED( soil_type_f%var_2d ) ) THEN
4134	IF ( soil_type_f%var_2d(j,i) == soil_type_f%fill ) &
4135	check_passed = .FALSE.
4136	ELSE
4137	IF ( ANY( soil_type_f%var_3d(:,j,i) == soil_type_f%fill) ) &
4138	check_passed = .FALSE.
4139	ENDIF
4140
4141	IF ( .NOT. check_passed ) THEN
4142	message_string = 'soil_type is required for each '// &
4143	'location (y,x) where vegetation_type or ' // &
4144	'pavement_type is a non-missing value.'
4145	CALL message( 'netcdf_data_input_mod', 'PA0564', &
4146	2, 2, myid, 6, 0 )
4147	ENDIF
4148	ENDIF
4149	!
4150	!-- Check for consistency of surface fraction. If more than one type
4151	!-- is set, surface fraction need to be given and the sum must not
4152	!-- be larger than 1.
4153	n_surf = 0
4154	IF ( vegetation_type_f%var(j,i) /= vegetation_type_f%fill ) &
4155	n_surf = n_surf + 1
4156	IF ( water_type_f%var(j,i) /= water_type_f%fill ) &
4157	n_surf = n_surf + 1
4158	IF ( pavement_type_f%var(j,i) /= pavement_type_f%fill ) &
4159	n_surf = n_surf + 1
4160
4161	IF ( n_surf > 1 ) THEN
4162	IF ( .NOT. surface_fraction_f%from_file ) THEN
4163	message_string = 'If more than one surface type is ' // &
4164	'given at a location, surface_fraction ' // &
4165	'must be provided.'
4166	CALL message( 'netcdf_data_input_mod', 'PA0565', &
4167	2, 2, myid, 6, 0 )
4168	ELSEIF ( ANY ( surface_fraction_f%frac(:,j,i) == &
4169	surface_fraction_f%fill ) ) THEN
4170	message_string = 'If more than one surface type is ' // &
4171	'given at a location, surface_fraction ' // &
4172	'must be provided.'
4173	CALL message( 'netcdf_data_input_mod', 'PA0565', &
4174	2, 2, myid, 6, 0 )
4175	ENDIF
4176	ENDIF
4177	!
4178	!-- Check for further mismatches. e.g. relative fractions exceed 1 or
4179	!-- vegetation_type is set but surface vegetation fraction is zero,
4180	!-- etc..
4181	IF ( surface_fraction_f%from_file ) THEN
4182	!
4183	!-- Sum of relative fractions must not exceed 1.
4184	IF ( SUM ( surface_fraction_f%frac(0:2,j,i) ) > 1.0_wp ) THEN
4185	message_string = 'surface_fraction must not exceed 1'
4186	CALL message( 'netcdf_data_input_mod', 'PA0566', &
4187	2, 2, myid, 6, 0 )
4188	ENDIF
4189	!
4190	!-- Relative fraction for a type must not be zero at locations where
4191	!-- this type is set.
4192	IF ( &
4193	( vegetation_type_f%var(j,i) /= vegetation_type_f%fill .AND.&
4194	( surface_fraction_f%frac(ind_veg_wall,j,i) == 0.0_wp .OR. &
4195	surface_fraction_f%frac(ind_veg_wall,j,i) == &
4196	surface_fraction_f%fill ) &
4197	) .OR. &
4198	( pavement_type_f%var(j,i) /= pavement_type_f%fill .AND. &
4199	( surface_fraction_f%frac(ind_pav_green,j,i) == 0.0_wp .OR. &
4200	surface_fraction_f%frac(ind_pav_green,j,i) == &