summary:
Gryschka:
 Coupling with different resolution and different numbers of PEs in
ocean and atmosphere is available
 Exchange of u and v from ocean surface to atmosphere surface
 Mirror boundary condition for u and v at the bottom are replaced
by dirichlet boundary conditions
 Inflow turbulence is now defined by flucuations around spanwise mean
 Bugfixes for cyclic_fill and constant_volume_flow
Suehring:
 New advection added ( Wicker and Skamarock 5th order ), therefore:
 New module advec_ws.f90
 Modified exchange of ghost boundaries.
 Modified evaluation of turbulent fluxes
 New index bounds nxlg, nxrg, nysg, nyng
advec_ws.f90
Advection scheme for scalars and momentum using the flux formulation of
Wicker and Skamarock 5th order.
Additionally the module contains of a routine using for initialisation and
steering of the statical evaluation. The computation of turbulent fluxes takes
place inside the advection routines.
In case of vector architectures Dirichlet and Radiation boundary conditions are
outstanding and not available. Furthermore simulations within topography are
not possible so far. A further routine local_diss_ij is available and is used
if a control of dissipative fluxes is desired.
check_parameters.f90
Exchange of parameters between ocean and atmosphere via PE0
Check for illegal combination of wsscheme and timestep scheme.
Check for topography and wsscheme.
Check for not cyclic boundary conditions in combination with wsscheme and
loop_optimization = 'vector'.
Check for call_psolver_at_all_substeps and wsscheme for momentum_advec.
Different processor/grid topology in atmosphere and ocean is now allowed!
Bugfixes in checking for conserve_volume_flow_mode.
exchange_horiz.f90
Dynamic exchange of ghost points with nbgp_local to ensure that no useless
ghost points exchanged in case of multigrid. type_yz(0) and type_xz(0) used for
normal grid, the remaining types used for the several grid levels.
Exchange is done via MPIVectors with a dynamic value of ghost points which
depend on the advection scheme. Exchange of left and right PEs is 10% faster
with MPIVectors than without.
flow_statistics.f90
When advection is computed with wsscheme, turbulent fluxes are already
computed in the respective advection routines and buffered in arrays
sums_xxxx_ws_l(). This is due to a consistent treatment of statistics
with the numerics and to avoid unphysical kinks near the surface. So some if
requests has to be done to dicern between fluxes from wsscheme other advection
schemes. Furthermore the computation of z_i is only done if the heat flux
exceeds a minimum value. This affects only simulations of a neutral boundary
layer and is due to reasons of computations in the advection scheme.
inflow_turbulence.f90
Using nbgp recycling planes for a better resolution of the turbulent flow near
the inflow.
init_grid.f90
Definition of new array bounds nxlg, nxrg, nysg, nyng on each PE.
Furthermore the allocation of arrays and steering of loops is done with these
parameters. Call of exchange_horiz are modified.
In case of dirichlet bounday condition at the bottom zu(0)=0.0
dzu_mg has to be set explicitly for a equally spaced grid near bottom.
ddzu_pres added to use a equally spaced grid near bottom.
init_pegrid.f90
Moved determination of target_id's from init_coupling
Determination of parameters needed for coupling (coupling_topology, ngp_a, ngp_o)
with different grid/processortopology in ocean and atmosphere
Adaption of ngp_xy, ngp_y to a dynamic number of ghost points.
The maximum_grid_level changed from 1 to 0. 0 is the normal grid, 1 to
maximum_grid_level the grids for multigrid, in which 0 and 1 are normal grids.
This distinction is due to reasons of data exchange and performance for the
normal grid and grids in poismg.
The definition of MPIVectors adapted to a dynamic numer of ghost points.
New MPIVectors for data exchange between left and right boundaries added.
This is due to reasons of performance (10% faster).
ATTENTION: nnz_x undefined problem still has to be solved!!!!!!!!
TEST OUTPUT (TO BE REMOVED) logging mpi2 ierr values
parin.f90
Steering parameter dissipation_control added in inipar.
Makefile
Module advec_ws added.
Modules
Removed u_nzb_p1_for_vfc and v_nzb_p1_for_vfc
For coupling with different resolution in ocean and atmophere:
+nx_a, +nx_o, ny_a, +ny_o, ngp_a, ngp_o, +total_2d_o, +total_2d_a,
+coupling_topology
Buffer arrays for the left sided advective fluxes added in arrays_3d.
+flux_s_u, +flux_s_v, +flux_s_w, +diss_s_u, +diss_s_v, +diss_s_w,
+flux_s_pt, +diss_s_pt, +flux_s_e, +diss_s_e, +flux_s_q, +diss_s_q,
+flux_s_sa, +diss_s_sa
3d arrays for dissipation control added. (only necessary for vector arch.)
+var_x, +var_y, +var_z, +gamma_x, +gamma_y, +gamma_z
Default of momentum_advec and scalar_advec changed to 'wsscheme' .
+exchange_mg added in control_parameters to steer the data exchange.
Parameters +nbgp, +nxlg, +nxrg, +nysg, +nyng added in indices.
flag array +boundary_flags added in indices to steer the degradation of order
of the advective fluxes when noncyclic boundaries are used.
MPIdatatypes +type_y, +type_y_int and +type_yz for data_exchange added in
pegrid.
+sums_wsus_ws_l, +sums_wsvs_ws_l, +sums_us2_ws_l, +sums_vs2_ws_l,
+sums_ws2_ws_l, +sums_wspts_ws_l, +sums_wssas_ws_l, +sums_wsqs_ws_l
and +weight_substep added in statistics to steer the statistical evaluation
of turbulent fluxes in the advection routines.
LOGICALS +ws_scheme_sca and +ws_scheme_mom added to get a better performance
in prognostic_equations.
LOGICAL +dissipation_control control added to steer numerical dissipation
in wsscheme.
Changed length of string run_description_header
pres.f90
New allocation of tend when wsscheme and multigrid is used. This is due to
reasons of perforance of the data_exchange. The same is done with p after
poismg is called.
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng when no
multigrid is used. Calls of exchange_horiz are modified.
bugfix: After pressure correction no volume flow correction in case of
noncyclic boundary conditions
(has to be done only before pressure correction)
Call of SOR routine is referenced with ddzu_pres.
prognostic_equations.f90
Calls of the advection routines with WS5 added.
Calls of ws_statistics added to set the statistical arrays to zero after each
time step.
advec_particles.f90
Declaration of de_dx, de_dy, de_dz adapted to additional ghost points.
Furthermore the calls of exchange_horiz were modified.
asselin_filter.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
average_3d_data.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
boundary_conds.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
Removed mirror boundary conditions for u and v at the bottom in case of
ibc_uv_b == 0. Instead, dirichelt boundary conditions (u=v=0) are set
in init_3d_model
calc_liquid_water_content.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
calc_spectra.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng for
allocation of tend.
check_open.f90
Output of total array size was adapted to nbgp.
data_output_2d.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
allocation of arrays local_2d and total_2d.
Calls of exchange_horiz are modified.
data_output_2d.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
allocation of arrays. Calls of exchange_horiz are modified.
Skipvalue skip_do_avs changed to a dynamic adaption of ghost points.
data_output_mask.f90
Calls of exchange_horiz are modified.
diffusion_e.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusion_s.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusion_u.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusion_v.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusion_w.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusivities.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
diffusivities.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
Calls of exchange_horiz are modified.
exchange_horiz_2d.f90
Dynamic exchange of ghost points with nbgp, which depends on the advection
scheme. Exchange between left and right PEs is now done with MPIvectors.
global_min_max.f90
Adapting of the index arrays, because MINLOC assumes lowerbound
at 1 and not at nbgp.
init_3d_model.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
allocation of arrays. Calls of exchange_horiz are modified.
Call ws_init to initialize arrays needed for statistical evaluation and
optimization when wsscheme is used.
Initial volume flow is now calculated by using the variable hom_sum.
Therefore the correction of initial volume flow for nonflat topography
removed (removed u_nzb_p1_for_vfc and v_nzb_p1_for_vfc)
Changed surface boundary conditions for u and v in case of ibc_uv_b == 0 from
mirror bc to dirichlet boundary conditions (u=v=0), so that k=nzb is
representative for the height z0
Bugfix: type conversion of '1' to 64bit for the MAX function (ngp_3d_inner)
init_coupling.f90
determination of target_id's moved to init_pegrid
init_pt_anomaly.f90
Call of exchange_horiz are modified.
init_rankine.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
Calls of exchange_horiz are modified.
init_slope.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
header.f90
Output of advection scheme.
poismg.f90
Calls of exchange_horiz are modified.
prandtl_fluxes.f90
Changed surface boundary conditions for u and v from mirror bc to dirichelt bc,
therefore u(uzb,:,:) and v(nzb,:,:) is now representative for the height z0
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
production_e.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng
read_3d_binary.f90
+/ 1 replaced with +/ nbgp when swapping and allocating variables.
sor.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
Call of exchange_horiz are modified.
bug removed in declaration of ddzw(), nz replaced by nzt+1
subsidence.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
sum_up_3d_data.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
surface_coupler.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in
MPI_SEND() and MPI_RECV.
additional case for nonequivalent processor and grid topopolgy in ocean and
atmosphere added (coupling_topology = 1)
Added exchange of u and v from Ocean to Atmosphere
time_integration.f90
Calls of exchange_horiz are modified.
Adaption to slooping surface.
timestep.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
user_3d_data_averaging.f90, user_data_output_2d.f90, user_data_output_3d.f90,
user_actions.f90, user_init.f90, user_init_plant_canopy.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
user_read_restart_data.f90
Allocation with nbgp.
wall_fluxes.f90
nxl1, nxr+1, nys1, nyn+1 replaced by nxlg, nxrg, nysg, nyng.
write_compressed.f90
Array bounds and nx, ny adapted with nbgp.
sor.f90
bug removed in declaration of ddzw(), nz replaced by nzt+1
