1 | !> @file data_output_binary_module.f90 |
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2 | !--------------------------------------------------------------------------------------------------! |
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3 | ! This file is part of the PALM model system. |
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4 | ! |
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5 | ! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General |
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6 | ! Public License as published by the Free Software Foundation, either version 3 of the License, or |
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7 | ! (at your option) any later version. |
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8 | ! |
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9 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the |
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10 | ! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General |
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11 | ! Public License for more details. |
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12 | ! |
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13 | ! You should have received a copy of the GNU General Public License along with PALM. If not, see |
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14 | ! <http://www.gnu.org/licenses/>. |
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15 | ! |
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16 | ! Copyright 2019-2020 Leibniz Universitaet Hannover |
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17 | !--------------------------------------------------------------------------------------------------! |
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18 | ! |
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19 | ! Current revisions: |
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20 | ! ------------------ |
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21 | ! |
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22 | ! |
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23 | ! Former revisions: |
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24 | ! ----------------- |
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25 | ! $Id: data_output_binary_module.f90 4559 2020-06-11 08:51:48Z gronemeier $ |
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26 | ! file re-formatted to follow the PALM coding standard |
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27 | ! |
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28 | ! 4481 2020-03-31 18:55:54Z maronga |
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29 | ! Enable character-array output |
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30 | ! |
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31 | ! 4232 2019-09-20 09:34:22Z knoop |
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32 | ! Bugfix: INCLUDE "mpif.h" must be placed after IMPLICIT NONE statement |
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33 | ! |
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34 | ! 4147 2019-08-07 09:42:31Z gronemeier |
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35 | ! corrected indentation according to coding standard |
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36 | ! |
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37 | ! 4141 2019-08-05 12:24:51Z gronemeier |
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38 | ! Initial revision |
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39 | ! |
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40 | ! |
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41 | ! Authors: |
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42 | ! -------- |
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43 | !> @author: Tobias Gronemeier |
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44 | ! |
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45 | ! Description: |
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46 | ! ------------ |
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47 | !> Binary output module to write output data into binary files. |
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48 | !> |
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49 | !> @todo Get iostat value of write statements. |
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50 | !--------------------------------------------------------------------------------------------------! |
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51 | MODULE data_output_binary_module |
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52 | |
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53 | USE kinds |
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54 | |
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55 | #if defined( __parallel ) && !defined( __mpifh ) |
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56 | USE MPI |
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57 | #endif |
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58 | |
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59 | IMPLICIT NONE |
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60 | |
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61 | #if defined( __parallel ) && defined( __mpifh ) |
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62 | INCLUDE "mpif.h" |
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63 | #endif |
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64 | |
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65 | |
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66 | CHARACTER(LEN=*), PARAMETER :: config_file_name = 'BINARY_TO_NETCDF_CONFIG' !< name of config |
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67 | !< file |
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68 | CHARACTER(LEN=*), PARAMETER :: file_prefix = 'BIN_' !< file prefix for |
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69 | !< binary files |
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70 | CHARACTER(LEN=*), PARAMETER :: mode_binary = 'binary' !< string to |
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71 | !< select operation mode of module |
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72 | |
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73 | INTEGER, PARAMETER :: charlen = 100 !< maximum length of character variables |
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74 | |
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75 | CHARACTER(LEN=charlen) :: file_suffix = '' !< file suffix added to each file |
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76 | !< name |
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77 | CHARACTER(LEN=800) :: internal_error_message = '' !< string containing the last error |
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78 | !< message |
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79 | CHARACTER(LEN=800) :: temp_string !< dummy string |
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80 | |
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81 | INTEGER :: binary_file_lowest_unit = 1000 !< lowest unit number of all binary files created by |
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82 | !< this module |
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83 | INTEGER :: config_file_unit !< unit number of config file |
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84 | INTEGER :: debug_output_unit !< Fortran Unit Number of the debug-output file |
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85 | INTEGER :: global_id_in_file = -1 !< value of global ID within a file |
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86 | INTEGER :: master_rank !< master rank for tasks to be executed by single PE |
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87 | !< only |
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88 | INTEGER :: next_available_unit !< next unit number available for new file |
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89 | INTEGER :: output_group_comm !< MPI communicator addressing all MPI ranks which |
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90 | !< participate in output |
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91 | |
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92 | INTEGER, DIMENSION(:), ALLOCATABLE :: files_highest_variable_id !< highest assigned ID of |
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93 | !< variable or dimension in a file |
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94 | |
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95 | LOGICAL :: binary_open_file_first_call = .TRUE. !< true if binary_open_file routine was not |
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96 | !< called yet |
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97 | LOGICAL :: config_file_open = .FALSE. !< true if config file is opened and not |
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98 | !< closed |
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99 | LOGICAL :: print_debug_output = .FALSE. !< if true, debug output is printed |
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100 | |
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101 | SAVE |
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102 | |
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103 | PRIVATE |
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104 | |
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105 | INTERFACE binary_init_module |
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106 | MODULE PROCEDURE binary_init_module |
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107 | END INTERFACE binary_init_module |
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108 | |
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109 | INTERFACE binary_open_file |
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110 | MODULE PROCEDURE binary_open_file |
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111 | END INTERFACE binary_open_file |
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112 | |
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113 | INTERFACE binary_init_dimension |
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114 | MODULE PROCEDURE binary_init_dimension |
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115 | END INTERFACE binary_init_dimension |
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116 | |
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117 | INTERFACE binary_init_variable |
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118 | MODULE PROCEDURE binary_init_variable |
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119 | END INTERFACE binary_init_variable |
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120 | |
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121 | INTERFACE binary_write_attribute |
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122 | MODULE PROCEDURE binary_write_attribute |
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123 | END INTERFACE binary_write_attribute |
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124 | |
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125 | INTERFACE binary_stop_file_header_definition |
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126 | MODULE PROCEDURE binary_stop_file_header_definition |
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127 | END INTERFACE binary_stop_file_header_definition |
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128 | |
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129 | INTERFACE binary_write_variable |
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130 | MODULE PROCEDURE binary_write_variable |
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131 | END INTERFACE binary_write_variable |
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132 | |
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133 | INTERFACE binary_finalize |
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134 | MODULE PROCEDURE binary_finalize |
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135 | END INTERFACE binary_finalize |
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136 | |
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137 | INTERFACE binary_get_error_message |
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138 | MODULE PROCEDURE binary_get_error_message |
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139 | END INTERFACE binary_get_error_message |
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140 | |
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141 | PUBLIC & |
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142 | binary_finalize, & |
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143 | binary_get_error_message, & |
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144 | binary_init_dimension, & |
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145 | binary_init_module, & |
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146 | binary_init_variable, & |
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147 | binary_open_file, & |
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148 | binary_stop_file_header_definition, & |
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149 | binary_write_attribute, & |
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150 | binary_write_variable |
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151 | |
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152 | |
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153 | CONTAINS |
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154 | |
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155 | |
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156 | !--------------------------------------------------------------------------------------------------! |
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157 | ! Description: |
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158 | ! ------------ |
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159 | !> Initialize data-output module. |
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160 | !--------------------------------------------------------------------------------------------------! |
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161 | SUBROUTINE binary_init_module( file_suffix_of_output_group, mpi_comm_of_output_group, & |
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162 | master_output_rank, program_debug_output_unit, debug_output, & |
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163 | dom_global_id ) |
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164 | |
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165 | CHARACTER(LEN=*), INTENT(IN) :: file_suffix_of_output_group !> file-name suffix added to each file; |
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166 | !> must be unique for each output group |
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167 | |
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168 | INTEGER, INTENT(IN) :: dom_global_id !< global id within a file defined by DOM |
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169 | INTEGER, INTENT(IN) :: master_output_rank !< MPI rank executing tasks which must be |
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170 | !< executed by a single PE |
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171 | INTEGER, INTENT(IN) :: mpi_comm_of_output_group !< MPI communicator specifying the rank group |
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172 | !< participating in output |
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173 | INTEGER, INTENT(IN) :: program_debug_output_unit !< file unit number for debug output |
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174 | |
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175 | LOGICAL, INTENT(IN) :: debug_output !< if true, debug output is printed |
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176 | |
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177 | |
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178 | file_suffix = file_suffix_of_output_group |
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179 | output_group_comm = mpi_comm_of_output_group |
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180 | master_rank = master_output_rank |
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181 | |
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182 | debug_output_unit = program_debug_output_unit |
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183 | print_debug_output = debug_output |
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184 | |
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185 | global_id_in_file = dom_global_id |
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186 | |
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187 | END SUBROUTINE binary_init_module |
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188 | |
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189 | !--------------------------------------------------------------------------------------------------! |
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190 | ! Description: |
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191 | ! ------------ |
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192 | !> Open binary file. |
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193 | !--------------------------------------------------------------------------------------------------! |
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194 | SUBROUTINE binary_open_file( mode, file_name, file_id, return_value ) |
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195 | |
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196 | CHARACTER(LEN=charlen) :: bin_filename = '' !< actual name of binary file |
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197 | CHARACTER(LEN=7) :: my_rank_char !< string containing value of my_rank |
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198 | !< with leading zeros |
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199 | |
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200 | CHARACTER(LEN=charlen), INTENT(IN) :: file_name !< name of file |
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201 | CHARACTER(LEN=*), INTENT(IN) :: mode !< operation mode |
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202 | |
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203 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_open_file' !< name of this routine |
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204 | |
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205 | INTEGER :: my_rank !< MPI rank of local processor |
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206 | INTEGER :: nranks !< number of MPI ranks participating in output |
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207 | |
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208 | INTEGER, INTENT(OUT) :: file_id !< file ID |
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209 | INTEGER, INTENT(OUT) :: return_value !< return value |
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210 | |
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211 | INTEGER, DIMENSION(:), ALLOCATABLE :: files_highest_variable_id_tmp !< temporary list of given |
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212 | !< variable IDs in file |
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213 | |
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214 | LOGICAL :: file_exists !< true if file to be opened already exists |
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215 | |
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216 | |
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217 | return_value = 0 |
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218 | |
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219 | #if defined( __parallel ) |
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220 | CALL MPI_COMM_SIZE( output_group_comm, nranks, return_value ) |
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221 | IF ( return_value == 0 ) CALL MPI_COMM_RANK( output_group_comm, my_rank, return_value ) |
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222 | IF ( return_value == 0 ) THEN |
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223 | WRITE( my_rank_char, '("_",I6.6)' ) my_rank |
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224 | ELSE |
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225 | CALL internal_message( 'error', routine_name // ': MPI error' ) |
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226 | ENDIF |
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227 | #else |
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228 | nranks = 1 |
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229 | my_rank = master_rank |
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230 | WRITE( my_rank_char, '("_",I6.6)' ) my_rank |
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231 | #endif |
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232 | ! |
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233 | !-- Check mode (not required, added for compatibility reasons) |
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234 | IF ( TRIM( mode ) == mode_binary ) CONTINUE |
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235 | ! |
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236 | !-- Open binary config file for combining script |
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237 | IF ( return_value == 0 .AND. binary_open_file_first_call ) THEN |
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238 | |
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239 | binary_open_file_first_call = .FALSE. |
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240 | config_file_unit = binary_file_lowest_unit |
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241 | |
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242 | IF ( my_rank == master_rank ) THEN |
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243 | ! |
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244 | !-- Remove any pre-existing file |
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245 | INQUIRE( FILE=TRIM( config_file_name ) // TRIM( file_suffix ), EXIST = file_exists ) |
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246 | |
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247 | IF ( file_exists ) THEN |
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248 | CALL internal_message( 'debug', routine_name // ': Remove existing file ' // & |
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249 | TRIM( config_file_name ) // TRIM( file_suffix ) ) |
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250 | !> @note Fortran2008 feature 'EXECUTE_COMMAND_LINE' not yet supported by |
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251 | !> PGI 18.10 compiler. Hence, non-standard 'SYSTEM' call must be used |
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252 | ! CALL EXECUTE_COMMAND_LINE( & |
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253 | ! COMMAND='rm ' // TRIM( config_file_name ) // TRIM( file_suffix ), & |
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254 | ! WAIT=.TRUE., EXITSTAT=return_value ) |
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255 | CALL SYSTEM( 'rm ' // TRIM( config_file_name ) // TRIM( file_suffix ) ) |
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256 | ENDIF |
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257 | |
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258 | OPEN( config_file_unit, FILE = TRIM( config_file_name ) // TRIM( file_suffix ), & |
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259 | FORM = 'UNFORMATTED', STATUS = 'NEW', IOSTAT=return_value ) |
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260 | |
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261 | IF ( return_value == 0 ) THEN |
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262 | |
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263 | config_file_open = .TRUE. |
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264 | ! |
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265 | !-- Write some general information to config file |
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266 | WRITE( config_file_unit ) nranks |
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267 | WRITE( config_file_unit ) master_rank |
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268 | WRITE( config_file_unit ) LEN( file_prefix ) |
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269 | WRITE( config_file_unit ) file_prefix |
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270 | WRITE( config_file_unit ) charlen |
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271 | WRITE( config_file_unit ) global_id_in_file |
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272 | |
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273 | ELSE |
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274 | |
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275 | return_value = 1 |
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276 | CALL internal_message( 'error', routine_name // ': could not create config' ) |
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277 | |
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278 | ENDIF |
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279 | |
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280 | ENDIF |
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281 | |
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282 | next_available_unit = binary_file_lowest_unit + 1 |
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283 | |
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284 | ENDIF |
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285 | ! |
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286 | !-- Initialize output file: open, write header, initialize variable/dimension IDs |
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287 | IF ( return_value == 0 ) THEN |
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288 | |
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289 | bin_filename = file_prefix // TRIM( file_name ) // TRIM( file_suffix ) // my_rank_char |
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290 | ! |
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291 | !-- Remove any pre-existing file |
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292 | INQUIRE( FILE = TRIM( bin_filename ), EXIST = file_exists ) |
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293 | |
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294 | IF ( file_exists ) THEN |
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295 | CALL internal_message( 'debug', routine_name // ': remove existing file ' // & |
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296 | TRIM( bin_filename ) ) |
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297 | !> @note Fortran2008 feature 'EXECUTE_COMMAND_LINE' not yet supported by |
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298 | !> PGI 18.10 compiler. Hence, non-standard 'SYSTEM' call must be used |
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299 | ! CALL EXECUTE_COMMAND_LINE( COMMAND='rm ' // TRIM( bin_filename ), & |
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300 | ! WAIT=.TRUE., EXITSTAT=return_value ) |
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301 | CALL SYSTEM( 'rm ' // TRIM( bin_filename ) ) |
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302 | ENDIF |
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303 | ! |
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304 | !-- Open binary file |
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305 | CALL internal_message( 'debug', routine_name // ': open file ' // TRIM( bin_filename ) ) |
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306 | OPEN ( next_available_unit, FILE = TRIM( bin_filename ), FORM = 'UNFORMATTED', & |
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307 | STATUS = 'NEW', IOSTAT = return_value ) |
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308 | |
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309 | IF ( return_value == 0 ) THEN |
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310 | ! |
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311 | !-- Add file_name to config file |
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312 | IF ( my_rank == master_rank ) THEN |
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313 | WRITE( config_file_unit ) file_name |
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314 | ENDIF |
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315 | ! |
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316 | !-- Save file ID and increase next file unit number |
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317 | file_id = next_available_unit |
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318 | next_available_unit = next_available_unit + 1 |
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319 | ! |
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320 | !-- Write some meta data to file |
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321 | WRITE ( file_id ) charlen |
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322 | WRITE ( file_id ) file_id |
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323 | WRITE ( file_id ) file_name |
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324 | ! |
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325 | !-- Extend file-variable/dimension-ID list by 1 and set it to 0 for new file. |
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326 | IF ( ALLOCATED( files_highest_variable_id ) ) THEN |
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327 | ALLOCATE( files_highest_variable_id_tmp( SIZE( files_highest_variable_id ) ) ) |
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328 | files_highest_variable_id_tmp = files_highest_variable_id |
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329 | DEALLOCATE( files_highest_variable_id ) |
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330 | ALLOCATE( files_highest_variable_id(binary_file_lowest_unit+1:file_id) ) |
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331 | files_highest_variable_id(:file_id-1) = files_highest_variable_id_tmp |
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332 | DEALLOCATE( files_highest_variable_id_tmp ) |
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333 | ELSE |
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334 | ALLOCATE( files_highest_variable_id(binary_file_lowest_unit+1:file_id) ) |
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335 | ENDIF |
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336 | files_highest_variable_id(file_id) = 0 |
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337 | |
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338 | ELSE |
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339 | return_value = 1 |
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340 | CALL internal_message( 'error', routine_name // ': could not open file "' // & |
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341 | TRIM( file_name ) // '"') |
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342 | ENDIF |
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343 | |
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344 | ENDIF |
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345 | |
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346 | END SUBROUTINE binary_open_file |
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347 | |
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348 | !--------------------------------------------------------------------------------------------------! |
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349 | ! Description: |
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350 | ! ------------ |
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351 | !> Write attribute to file. |
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352 | !--------------------------------------------------------------------------------------------------! |
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353 | SUBROUTINE binary_write_attribute( file_id, variable_id, attribute_name, value_char, value_int8, & |
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354 | value_int16, value_int32, value_real32, value_real64, & |
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355 | return_value ) |
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356 | |
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357 | CHARACTER(LEN=charlen) :: attribute_type !< data type of attribute |
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358 | CHARACTER(LEN=charlen) :: output_string !< output string |
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359 | |
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360 | CHARACTER(LEN=charlen), INTENT(IN) :: attribute_name !< name of attribute |
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361 | CHARACTER(LEN=charlen), INTENT(IN), OPTIONAL :: value_char !< value of attribute |
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362 | |
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363 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_write_attribute' !< name of this routine |
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364 | |
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365 | INTEGER, INTENT(IN) :: file_id !< file ID |
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366 | INTEGER, INTENT(IN) :: variable_id !< variable ID |
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367 | |
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368 | INTEGER, INTENT(OUT) :: return_value !< return value |
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369 | |
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370 | INTEGER(KIND=1), INTENT(IN), OPTIONAL :: value_int8 !< value of attribute |
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371 | INTEGER(KIND=2), INTENT(IN), OPTIONAL :: value_int16 !< value of attribute |
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372 | INTEGER(KIND=4), INTENT(IN), OPTIONAL :: value_int32 !< value of attribute |
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373 | |
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374 | REAL(KIND=4), INTENT(IN), OPTIONAL :: value_real32 !< value of attribute |
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375 | REAL(KIND=8), INTENT(IN), OPTIONAL :: value_real64 !< value of attribute |
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376 | |
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377 | |
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378 | return_value = 0 |
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379 | |
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380 | CALL internal_message( 'debug', TRIM( routine_name ) // ': write attribute ' // & |
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381 | TRIM( attribute_name ) ) |
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382 | ! |
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383 | !-- Write attribute to file |
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384 | output_string = 'attribute' |
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385 | WRITE( file_id ) output_string |
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386 | |
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387 | WRITE( file_id ) variable_id |
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388 | WRITE( file_id ) attribute_name |
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389 | |
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390 | IF ( PRESENT( value_char ) ) THEN |
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391 | attribute_type = 'char' |
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392 | WRITE( file_id ) attribute_type |
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393 | WRITE( file_id ) value_char |
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394 | ELSEIF ( PRESENT( value_int8 ) ) THEN |
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395 | attribute_type = 'int8' |
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396 | WRITE( file_id ) attribute_type |
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397 | WRITE( file_id ) value_int8 |
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398 | ELSEIF ( PRESENT( value_int16 ) ) THEN |
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399 | attribute_type = 'int16' |
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400 | WRITE( file_id ) attribute_type |
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401 | WRITE( file_id ) value_int16 |
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402 | ELSEIF ( PRESENT( value_int32 ) ) THEN |
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403 | attribute_type = 'int32' |
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404 | WRITE( file_id ) attribute_type |
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405 | WRITE( file_id ) value_int32 |
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406 | ELSEIF ( PRESENT( value_real32 ) ) THEN |
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407 | attribute_type = 'real32' |
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408 | WRITE( file_id ) attribute_type |
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409 | WRITE( file_id ) value_real32 |
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410 | ELSEIF ( PRESENT( value_real64 ) ) THEN |
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411 | attribute_type = 'real64' |
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412 | WRITE( file_id ) attribute_type |
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413 | WRITE( file_id ) value_real64 |
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414 | ELSE |
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415 | return_value = 1 |
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416 | CALL internal_message( 'error', TRIM( routine_name ) // & |
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417 | ': no value given for attribute "' // TRIM( attribute_name ) // '"' ) |
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418 | ENDIF |
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419 | |
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420 | END SUBROUTINE binary_write_attribute |
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421 | |
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422 | !--------------------------------------------------------------------------------------------------! |
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423 | ! Description: |
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424 | ! ------------ |
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425 | !> Initialize dimension. Write information in file header and save dimension values to be later |
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426 | !< written to file. |
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427 | !--------------------------------------------------------------------------------------------------! |
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428 | SUBROUTINE binary_init_dimension( mode, file_id, dimension_id, variable_id, dimension_name, & |
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429 | dimension_type, dimension_length, return_value ) |
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430 | |
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431 | CHARACTER(LEN=charlen) :: output_string !< output string |
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432 | |
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433 | CHARACTER(LEN=charlen), INTENT(IN) :: dimension_name !< name of dimension |
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434 | CHARACTER(LEN=charlen), INTENT(IN) :: dimension_type !< data type of dimension |
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435 | CHARACTER(LEN=*), INTENT(IN) :: mode !< operation mode |
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436 | |
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437 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_init_dimension' !< name of this routine |
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438 | |
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439 | INTEGER, INTENT(IN) :: dimension_length !< length of dimension |
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440 | INTEGER, INTENT(IN) :: file_id !< file ID |
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441 | |
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442 | INTEGER, INTENT(OUT) :: dimension_id !< dimension ID |
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443 | INTEGER, INTENT(OUT) :: return_value !< return value |
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444 | INTEGER, INTENT(OUT) :: variable_id !< variable ID |
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445 | |
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446 | |
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447 | return_value = 0 |
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448 | |
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449 | CALL internal_message( 'debug', routine_name // ': init dimension ' // TRIM( dimension_name ) ) |
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450 | ! |
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451 | !-- Check mode (not required, added for compatibility reasons only) |
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452 | IF ( TRIM( mode ) == mode_binary ) CONTINUE |
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453 | ! |
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454 | !-- Assign dimension ID |
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455 | dimension_id = files_highest_variable_id( file_id ) + 1 |
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456 | files_highest_variable_id( file_id ) = dimension_id |
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457 | ! |
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458 | !-- Define dimension in file |
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459 | output_string = 'dimension' |
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460 | WRITE( file_id ) output_string |
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461 | WRITE( file_id ) dimension_name |
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462 | WRITE( file_id ) dimension_id |
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463 | WRITE( file_id ) dimension_type |
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464 | WRITE( file_id ) dimension_length |
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465 | ! |
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466 | !-- Define variable associated with dimension |
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467 | CALL binary_init_variable( mode, file_id, variable_id, dimension_name, dimension_type, & |
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468 | (/ dimension_id /), is_global=.TRUE., return_value=return_value ) |
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469 | IF ( return_value /= 0 ) THEN |
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470 | CALL internal_message( 'error', routine_name // & |
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471 | ': init dimension "' // TRIM( dimension_name ) // '"' ) |
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472 | ENDIF |
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473 | |
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474 | END SUBROUTINE binary_init_dimension |
---|
475 | |
---|
476 | !--------------------------------------------------------------------------------------------------! |
---|
477 | ! Description: |
---|
478 | ! ------------ |
---|
479 | !> Initialize variable. Write information of variable into file header. |
---|
480 | !--------------------------------------------------------------------------------------------------! |
---|
481 | SUBROUTINE binary_init_variable( mode, file_id, variable_id, variable_name, variable_type, & |
---|
482 | dimension_ids, is_global, return_value ) |
---|
483 | |
---|
484 | CHARACTER(LEN=charlen) :: output_string !< output string |
---|
485 | CHARACTER(LEN=*), INTENT(IN) :: mode !< operation mode |
---|
486 | CHARACTER(LEN=charlen), INTENT(IN) :: variable_name !< name of variable |
---|
487 | CHARACTER(LEN=charlen), INTENT(IN) :: variable_type !< data type of variable |
---|
488 | |
---|
489 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_init_variable' !< name of this routine |
---|
490 | |
---|
491 | INTEGER, INTENT(IN) :: file_id !< file ID |
---|
492 | INTEGER, INTENT(OUT) :: variable_id !< variable ID |
---|
493 | INTEGER, INTENT(OUT) :: return_value !< return value |
---|
494 | |
---|
495 | INTEGER, DIMENSION(:), INTENT(IN) :: dimension_ids !< list of dimension IDs used by variable |
---|
496 | |
---|
497 | LOGICAL, INTENT(IN) :: is_global !< true if variable is global (same on all PE) |
---|
498 | |
---|
499 | |
---|
500 | return_value = 0 |
---|
501 | |
---|
502 | CALL internal_message( 'debug', routine_name // ': init variable ' // TRIM( variable_name ) ) |
---|
503 | ! |
---|
504 | !-- Check mode (not required, added for compatibility reasons only) |
---|
505 | IF ( TRIM( mode ) == mode_binary ) CONTINUE |
---|
506 | ! |
---|
507 | !-- Check if variable is global (not required, added for compatibility reasons only) |
---|
508 | IF ( is_global ) CONTINUE |
---|
509 | ! |
---|
510 | !-- Assign variable ID |
---|
511 | variable_id = files_highest_variable_id( file_id ) + 1 |
---|
512 | files_highest_variable_id( file_id ) = variable_id |
---|
513 | ! |
---|
514 | !-- Write variable information in file |
---|
515 | output_string = 'variable' |
---|
516 | WRITE( file_id ) output_string |
---|
517 | WRITE( file_id ) variable_name |
---|
518 | WRITE( file_id ) variable_id |
---|
519 | WRITE( file_id ) variable_type |
---|
520 | WRITE( file_id ) SIZE( dimension_ids ) |
---|
521 | WRITE( file_id ) dimension_ids |
---|
522 | |
---|
523 | END SUBROUTINE binary_init_variable |
---|
524 | |
---|
525 | !--------------------------------------------------------------------------------------------------! |
---|
526 | ! Description: |
---|
527 | ! ------------ |
---|
528 | !> Leave file definition state. |
---|
529 | !--------------------------------------------------------------------------------------------------! |
---|
530 | SUBROUTINE binary_stop_file_header_definition( file_id, return_value ) |
---|
531 | |
---|
532 | CHARACTER(LEN=charlen) :: output_string !< output string |
---|
533 | |
---|
534 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_stop_file_header_definition' !< name of |
---|
535 | !< this routine |
---|
536 | |
---|
537 | INTEGER, INTENT(IN) :: file_id !< file ID |
---|
538 | INTEGER, INTENT(OUT) :: return_value !< return value |
---|
539 | |
---|
540 | |
---|
541 | return_value = 0 |
---|
542 | |
---|
543 | WRITE( temp_string, * ) file_id |
---|
544 | CALL internal_message( 'debug', routine_name // ': finalize file definition (file_id=' // & |
---|
545 | TRIM( temp_string ) // ')' ) |
---|
546 | |
---|
547 | output_string = '*** end file header ***' |
---|
548 | WRITE( file_id ) output_string |
---|
549 | |
---|
550 | END SUBROUTINE binary_stop_file_header_definition |
---|
551 | |
---|
552 | !--------------------------------------------------------------------------------------------------! |
---|
553 | ! Description: |
---|
554 | ! ------------ |
---|
555 | !> Write variable to file. |
---|
556 | !--------------------------------------------------------------------------------------------------! |
---|
557 | SUBROUTINE binary_write_variable( & |
---|
558 | file_id, variable_id, bounds_start, value_counts, bounds_origin, & |
---|
559 | is_global, & |
---|
560 | values_char_0d, values_char_1d, values_char_2d, values_char_3d, & |
---|
561 | values_int8_0d, values_int8_1d, values_int8_2d, values_int8_3d, & |
---|
562 | values_int16_0d, values_int16_1d, values_int16_2d, values_int16_3d, & |
---|
563 | values_int32_0d, values_int32_1d, values_int32_2d, values_int32_3d, & |
---|
564 | values_intwp_0d, values_intwp_1d, values_intwp_2d, values_intwp_3d, & |
---|
565 | values_real32_0d, values_real32_1d, values_real32_2d, values_real32_3d, & |
---|
566 | values_real64_0d, values_real64_1d, values_real64_2d, values_real64_3d, & |
---|
567 | values_realwp_0d, values_realwp_1d, values_realwp_2d, values_realwp_3d, & |
---|
568 | return_value ) |
---|
569 | |
---|
570 | CHARACTER(LEN=charlen) :: output_string !< output string |
---|
571 | |
---|
572 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_write_variable' !< name of this routine |
---|
573 | |
---|
574 | CHARACTER(LEN=1), POINTER, INTENT(IN), OPTIONAL :: values_char_0d !< output variable |
---|
575 | CHARACTER(LEN=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_char_1d !< output variable |
---|
576 | CHARACTER(LEN=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_char_2d !< output variable |
---|
577 | CHARACTER(LEN=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_char_3d !< output variable |
---|
578 | |
---|
579 | INTEGER, INTENT(IN) :: file_id !< file ID |
---|
580 | INTEGER, INTENT(IN) :: variable_id !< variable ID |
---|
581 | INTEGER, INTENT(OUT) :: return_value !< return value |
---|
582 | |
---|
583 | INTEGER, DIMENSION(:), INTENT(IN) :: bounds_origin !< starting index of each dimension |
---|
584 | INTEGER, DIMENSION(:), INTENT(IN) :: bounds_start !< starting index of variable |
---|
585 | INTEGER, DIMENSION(:), INTENT(IN) :: value_counts !< count of values along each dimension to be written |
---|
586 | |
---|
587 | INTEGER(KIND=1), POINTER, INTENT(IN), OPTIONAL :: values_int8_0d !< output variable |
---|
588 | INTEGER(KIND=2), POINTER, INTENT(IN), OPTIONAL :: values_int16_0d !< output variable |
---|
589 | INTEGER(KIND=4), POINTER, INTENT(IN), OPTIONAL :: values_int32_0d !< output variable |
---|
590 | INTEGER(iwp), POINTER, INTENT(IN), OPTIONAL :: values_intwp_0d !< output variable |
---|
591 | INTEGER(KIND=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_int8_1d !< output variable |
---|
592 | INTEGER(KIND=2), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_int16_1d !< output variable |
---|
593 | INTEGER(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_int32_1d !< output variable |
---|
594 | INTEGER(iwp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_intwp_1d !< output variable |
---|
595 | INTEGER(KIND=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_int8_2d !< output variable |
---|
596 | INTEGER(KIND=2), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_int16_2d !< output variable |
---|
597 | INTEGER(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_int32_2d !< output variable |
---|
598 | INTEGER(iwp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_intwp_2d !< output variable |
---|
599 | INTEGER(KIND=1), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_int8_3d !< output variable |
---|
600 | INTEGER(KIND=2), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_int16_3d !< output variable |
---|
601 | INTEGER(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_int32_3d !< output variable |
---|
602 | INTEGER(iwp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_intwp_3d !< output variable |
---|
603 | |
---|
604 | LOGICAL, INTENT(IN) :: is_global !< true if variable is global (same on all PE) |
---|
605 | |
---|
606 | REAL(KIND=4), POINTER, INTENT(IN), OPTIONAL :: values_real32_0d !< output variable |
---|
607 | REAL(KIND=8), POINTER, INTENT(IN), OPTIONAL :: values_real64_0d !< output variable |
---|
608 | REAL(wp), POINTER, INTENT(IN), OPTIONAL :: values_realwp_0d !< output variable |
---|
609 | REAL(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_real32_1d !< output variable |
---|
610 | REAL(KIND=8), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_real64_1d !< output variable |
---|
611 | REAL(wp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:) :: values_realwp_1d !< output variable |
---|
612 | REAL(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_real32_2d !< output variable |
---|
613 | REAL(KIND=8), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_real64_2d !< output variable |
---|
614 | REAL(wp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:) :: values_realwp_2d !< output variable |
---|
615 | REAL(KIND=4), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_real32_3d !< output variable |
---|
616 | REAL(KIND=8), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_real64_3d !< output variable |
---|
617 | REAL(wp), POINTER, CONTIGUOUS, INTENT(IN), OPTIONAL, DIMENSION(:,:,:) :: values_realwp_3d !< output variable |
---|
618 | |
---|
619 | |
---|
620 | return_value = 0 |
---|
621 | |
---|
622 | WRITE( temp_string, '(": write variable ",I6," into file ",I6)' ) variable_id, file_id |
---|
623 | CALL internal_message( 'debug', routine_name // TRIM( temp_string ) ) |
---|
624 | |
---|
625 | IF ( is_global ) CONTINUE ! reqired to prevent compiler warning |
---|
626 | |
---|
627 | IF ( .NOT. ANY( value_counts == 0 ) ) THEN |
---|
628 | WRITE( file_id ) variable_id |
---|
629 | WRITE( file_id ) bounds_start |
---|
630 | WRITE( file_id ) value_counts |
---|
631 | WRITE( file_id ) bounds_origin |
---|
632 | ! |
---|
633 | !-- Character output |
---|
634 | IF ( PRESENT( values_char_0d ) ) THEN |
---|
635 | output_string = 'char' |
---|
636 | WRITE( file_id ) output_string |
---|
637 | WRITE( file_id ) values_char_0d |
---|
638 | ELSEIF ( PRESENT( values_char_1d ) ) THEN |
---|
639 | output_string = 'char' |
---|
640 | WRITE( file_id ) output_string |
---|
641 | WRITE( file_id ) values_char_1d |
---|
642 | ELSEIF ( PRESENT( values_char_2d ) ) THEN |
---|
643 | output_string = 'char' |
---|
644 | WRITE( file_id ) output_string |
---|
645 | WRITE( file_id ) values_char_2d |
---|
646 | ELSEIF ( PRESENT( values_char_3d ) ) THEN |
---|
647 | output_string = 'char' |
---|
648 | WRITE( file_id ) output_string |
---|
649 | WRITE( file_id ) values_char_3d |
---|
650 | ! |
---|
651 | !-- 8bit integer output |
---|
652 | ELSEIF ( PRESENT( values_int8_0d ) ) THEN |
---|
653 | output_string = 'int8' |
---|
654 | WRITE( file_id ) output_string |
---|
655 | WRITE( file_id ) values_int8_0d |
---|
656 | ELSEIF ( PRESENT( values_int8_1d ) ) THEN |
---|
657 | output_string = 'int8' |
---|
658 | WRITE( file_id ) output_string |
---|
659 | WRITE( file_id ) values_int8_1d |
---|
660 | ELSEIF ( PRESENT( values_int8_2d ) ) THEN |
---|
661 | output_string = 'int8' |
---|
662 | WRITE( file_id ) output_string |
---|
663 | WRITE( file_id ) values_int8_2d |
---|
664 | ELSEIF ( PRESENT( values_int8_3d ) ) THEN |
---|
665 | output_string = 'int8' |
---|
666 | WRITE( file_id ) output_string |
---|
667 | WRITE( file_id ) values_int8_3d |
---|
668 | ! |
---|
669 | !-- 16bit integer output |
---|
670 | ELSEIF ( PRESENT( values_int16_0d ) ) THEN |
---|
671 | output_string = 'int16' |
---|
672 | WRITE( file_id ) output_string |
---|
673 | WRITE( file_id ) values_int16_0d |
---|
674 | ELSEIF ( PRESENT( values_int16_1d ) ) THEN |
---|
675 | output_string = 'int16' |
---|
676 | WRITE( file_id ) output_string |
---|
677 | WRITE( file_id ) values_int16_1d |
---|
678 | ELSEIF ( PRESENT( values_int16_2d ) ) THEN |
---|
679 | output_string = 'int16' |
---|
680 | WRITE( file_id ) output_string |
---|
681 | WRITE( file_id ) values_int16_2d |
---|
682 | ELSEIF ( PRESENT( values_int16_3d ) ) THEN |
---|
683 | output_string = 'int16' |
---|
684 | WRITE( file_id ) output_string |
---|
685 | WRITE( file_id ) values_int16_3d |
---|
686 | ! |
---|
687 | !-- 32bit integer output |
---|
688 | ELSEIF ( PRESENT( values_int32_0d ) ) THEN |
---|
689 | output_string = 'int32' |
---|
690 | WRITE( file_id ) output_string |
---|
691 | WRITE( file_id ) values_int32_0d |
---|
692 | ELSEIF ( PRESENT( values_int32_1d ) ) THEN |
---|
693 | output_string = 'int32' |
---|
694 | WRITE( file_id ) output_string |
---|
695 | WRITE( file_id ) values_int32_1d |
---|
696 | ELSEIF ( PRESENT( values_int32_2d ) ) THEN |
---|
697 | output_string = 'int32' |
---|
698 | WRITE( file_id ) output_string |
---|
699 | WRITE( file_id ) values_int32_2d |
---|
700 | ELSEIF ( PRESENT( values_int32_3d ) ) THEN |
---|
701 | output_string = 'int32' |
---|
702 | WRITE( file_id ) output_string |
---|
703 | WRITE( file_id ) values_int32_3d |
---|
704 | ! |
---|
705 | !-- working-precision integer output |
---|
706 | ELSEIF ( PRESENT( values_intwp_0d ) ) THEN |
---|
707 | output_string = 'intwp' |
---|
708 | WRITE( file_id ) output_string |
---|
709 | WRITE( file_id ) values_intwp_0d |
---|
710 | ELSEIF ( PRESENT( values_intwp_1d ) ) THEN |
---|
711 | output_string = 'intwp' |
---|
712 | WRITE( file_id ) output_string |
---|
713 | WRITE( file_id ) values_intwp_1d |
---|
714 | ELSEIF ( PRESENT( values_intwp_2d ) ) THEN |
---|
715 | output_string = 'intwp' |
---|
716 | WRITE( file_id ) output_string |
---|
717 | WRITE( file_id ) values_intwp_2d |
---|
718 | ELSEIF ( PRESENT( values_intwp_3d ) ) THEN |
---|
719 | output_string = 'intwp' |
---|
720 | WRITE( file_id ) output_string |
---|
721 | WRITE( file_id ) values_intwp_3d |
---|
722 | ! |
---|
723 | !-- 32bit real output |
---|
724 | ELSEIF ( PRESENT( values_real32_0d ) ) THEN |
---|
725 | output_string = 'real32' |
---|
726 | WRITE( file_id ) output_string |
---|
727 | WRITE( file_id ) values_real32_0d |
---|
728 | ELSEIF ( PRESENT( values_real32_1d ) ) THEN |
---|
729 | output_string = 'real32' |
---|
730 | WRITE( file_id ) output_string |
---|
731 | WRITE( file_id ) values_real32_1d |
---|
732 | ELSEIF ( PRESENT( values_real32_2d ) ) THEN |
---|
733 | output_string = 'real32' |
---|
734 | WRITE( file_id ) output_string |
---|
735 | WRITE( file_id ) values_real32_2d |
---|
736 | ELSEIF ( PRESENT( values_real32_3d ) ) THEN |
---|
737 | output_string = 'real32' |
---|
738 | WRITE( file_id ) output_string |
---|
739 | WRITE( file_id ) values_real32_3d |
---|
740 | ! |
---|
741 | !-- 64bit real output |
---|
742 | ELSEIF ( PRESENT( values_real64_0d ) ) THEN |
---|
743 | output_string = 'real64' |
---|
744 | WRITE( file_id ) output_string |
---|
745 | WRITE( file_id ) values_real64_0d |
---|
746 | ELSEIF ( PRESENT( values_real64_1d ) ) THEN |
---|
747 | output_string = 'real64' |
---|
748 | WRITE( file_id ) output_string |
---|
749 | WRITE( file_id ) values_real64_1d |
---|
750 | ELSEIF ( PRESENT( values_real64_2d ) ) THEN |
---|
751 | output_string = 'real64' |
---|
752 | WRITE( file_id ) output_string |
---|
753 | WRITE( file_id ) values_real64_2d |
---|
754 | ELSEIF ( PRESENT( values_real64_3d ) ) THEN |
---|
755 | output_string = 'real64' |
---|
756 | WRITE( file_id ) output_string |
---|
757 | WRITE( file_id ) values_real64_3d |
---|
758 | ! |
---|
759 | !-- working-precision real output |
---|
760 | ELSEIF ( PRESENT( values_realwp_0d ) ) THEN |
---|
761 | output_string = 'realwp' |
---|
762 | WRITE( file_id ) output_string |
---|
763 | WRITE( file_id ) values_realwp_0d |
---|
764 | ELSEIF ( PRESENT( values_realwp_1d ) ) THEN |
---|
765 | output_string = 'realwp' |
---|
766 | WRITE( file_id ) output_string |
---|
767 | WRITE( file_id ) values_realwp_1d |
---|
768 | ELSEIF ( PRESENT( values_realwp_2d ) ) THEN |
---|
769 | output_string = 'realwp' |
---|
770 | WRITE( file_id ) output_string |
---|
771 | WRITE( file_id ) values_realwp_2d |
---|
772 | ELSEIF ( PRESENT( values_realwp_3d ) ) THEN |
---|
773 | output_string = 'realwp' |
---|
774 | WRITE( file_id ) output_string |
---|
775 | WRITE( file_id ) values_realwp_3d |
---|
776 | ELSE |
---|
777 | return_value = 1 |
---|
778 | CALL internal_message( 'error', routine_name // ': no values given' ) |
---|
779 | ENDIF |
---|
780 | |
---|
781 | ENDIF |
---|
782 | |
---|
783 | END SUBROUTINE binary_write_variable |
---|
784 | |
---|
785 | !--------------------------------------------------------------------------------------------------! |
---|
786 | ! Description: |
---|
787 | ! ------------ |
---|
788 | !> Close opened files. |
---|
789 | !--------------------------------------------------------------------------------------------------! |
---|
790 | SUBROUTINE binary_finalize( file_id, return_value ) |
---|
791 | |
---|
792 | CHARACTER(LEN=charlen) :: output_string !< output string |
---|
793 | |
---|
794 | CHARACTER(LEN=*), PARAMETER :: routine_name = 'binary_finalize' !< name of this routine |
---|
795 | |
---|
796 | INTEGER, INTENT(IN) :: file_id !< file ID |
---|
797 | INTEGER, INTENT(OUT) :: return_value !< return value |
---|
798 | |
---|
799 | |
---|
800 | IF ( config_file_open ) THEN |
---|
801 | |
---|
802 | output_string = '*** end config file ***' |
---|
803 | WRITE( config_file_unit ) output_string |
---|
804 | |
---|
805 | CLOSE( config_file_unit, IOSTAT=return_value ) |
---|
806 | |
---|
807 | IF ( return_value /= 0 ) THEN |
---|
808 | CALL internal_message( 'error', routine_name // ': cannot close configuration file' ) |
---|
809 | ELSE |
---|
810 | config_file_open = .FALSE. |
---|
811 | ENDIF |
---|
812 | |
---|
813 | ELSE |
---|
814 | |
---|
815 | return_value = 0 |
---|
816 | |
---|
817 | ENDIF |
---|
818 | |
---|
819 | IF ( return_value == 0 ) THEN |
---|
820 | |
---|
821 | WRITE( temp_string, * ) file_id |
---|
822 | CALL internal_message( 'debug', routine_name // & |
---|
823 | ': close file (file_id=' // TRIM( temp_string ) // ')' ) |
---|
824 | |
---|
825 | CLOSE( file_id, IOSTAT=return_value ) |
---|
826 | IF ( return_value /= 0 ) THEN |
---|
827 | WRITE( temp_string, * ) file_id |
---|
828 | CALL internal_message( 'error', routine_name // & |
---|
829 | ': cannot close file (file_id=' // TRIM( temp_string ) // ')' ) |
---|
830 | ENDIF |
---|
831 | |
---|
832 | ENDIF |
---|
833 | |
---|
834 | END SUBROUTINE binary_finalize |
---|
835 | |
---|
836 | !--------------------------------------------------------------------------------------------------! |
---|
837 | ! Description: |
---|
838 | ! ------------ |
---|
839 | !> Message routine writing debug information into the debug file or creating the error message |
---|
840 | !> string. |
---|
841 | !--------------------------------------------------------------------------------------------------! |
---|
842 | SUBROUTINE internal_message( level, string ) |
---|
843 | |
---|
844 | CHARACTER(LEN=*), INTENT(IN) :: level !< message importance level |
---|
845 | CHARACTER(LEN=*), INTENT(IN) :: string !< message string |
---|
846 | |
---|
847 | |
---|
848 | IF ( TRIM( level ) == 'error' ) THEN |
---|
849 | |
---|
850 | WRITE( internal_error_message, '(A,A)' ) ': ', string |
---|
851 | |
---|
852 | ELSEIF ( TRIM( level ) == 'debug' .AND. print_debug_output ) THEN |
---|
853 | |
---|
854 | WRITE( debug_output_unit, '(A,A)' ) 'DOM DEBUG: ', string |
---|
855 | FLUSH( debug_output_unit ) |
---|
856 | |
---|
857 | ENDIF |
---|
858 | |
---|
859 | END SUBROUTINE internal_message |
---|
860 | |
---|
861 | !--------------------------------------------------------------------------------------------------! |
---|
862 | ! Description: |
---|
863 | ! ------------ |
---|
864 | !> Return the last created error message. |
---|
865 | !--------------------------------------------------------------------------------------------------! |
---|
866 | FUNCTION binary_get_error_message() RESULT( error_message ) |
---|
867 | |
---|
868 | CHARACTER(LEN=800) :: error_message !< return error message to main program |
---|
869 | |
---|
870 | |
---|
871 | error_message = TRIM( internal_error_message ) |
---|
872 | |
---|
873 | internal_error_message = '' |
---|
874 | |
---|
875 | END FUNCTION binary_get_error_message |
---|
876 | |
---|
877 | END MODULE data_output_binary_module |
---|