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source: palm/trunk/SOURCE/data_output_3d.f90 @ 691

Last change on this file since 691 was 691, checked in by maronga, 13 years ago
Bugfix for precursor atmosphere/ocean runs, re-adjustments for lcxt4
Property svn:keywords set to `Id`
File size: 15.7 KB

Line
1	SUBROUTINE data_output_3d( av )
2
3	!------------------------------------------------------------------------------!
4	! Current revisions:
5	! -----------------
6	! Replaced simulated_time by time_since_reference_point
7	!
8	! Former revisions:
9	! -----------------
10	! $Id: data_output_3d.f90 691 2011-03-04 08:45:30Z maronga $
11	!
12	! 673 2011-01-18 16:19:48Z suehring
13	! When using Multigrid or SOR solver an additional CALL exchange_horiz is
14	! is needed for pressure output.
15	!
16	! 667 2010-12-23 12:06:00Z suehring/gryschka
17	! nxl-1, nxr+1, nys-1, nyn+1 replaced by nxlg, nxrg, nysg, nyng in loops and
18	! allocation of arrays. Calls of exchange_horiz are modified.
19	! Skip-value skip_do_avs changed to a dynamic adaption of ghost points.
20	!
21	! 646 2010-12-15 13:03:52Z raasch
22	! bugfix: missing define statements for netcdf added
23	!
24	! 493 2010-03-01 08:30:24Z raasch
25	! NetCDF4 support (parallel output)
26	!
27	! 355 2009-07-17 01:03:01Z letzel
28	! simulated_time in NetCDF output replaced by time_since_reference_point.
29	! Output of NetCDF messages with aid of message handling routine.
30	! Output of messages replaced by message handling routine.
31	! Bugfix: to_be_resorted => s_av for time-averaged scalars
32	!
33	! 96 2007-06-04 08:07:41Z raasch
34	! Output of density and salinity
35	!
36	! 75 2007-03-22 09:54:05Z raasch
37	! 2nd+3rd argument removed from exchange horiz
38	!
39	! RCS Log replace by Id keyword, revision history cleaned up
40	!
41	! Revision 1.3 2006/06/02 15:18:59 raasch
42	! +argument "found", -argument grid in call of routine user_data_output_3d
43	!
44	! Revision 1.2 2006/02/23 10:23:07 raasch
45	! Former subroutine plot_3d renamed data_output_3d, pl.. renamed do..,
46	! .._anz renamed .._n,
47	! output extended to (almost) all quantities, output of user-defined quantities
48	!
49	! Revision 1.1 1997/09/03 06:29:36 raasch
50	! Initial revision
51	!
52	!
53	! Description:
54	! ------------
55	! Output of the 3D-arrays in NetCDF and/or AVS format.
56	!------------------------------------------------------------------------------!
57
58	USE array_kind
59	USE arrays_3d
60	USE averaging
61	USE cloud_parameters
62	USE control_parameters
63	USE cpulog
64	USE indices
65	USE interfaces
66	USE netcdf_control
67	USE particle_attributes
68	USE pegrid
69
70	IMPLICIT NONE
71
72	CHARACTER (LEN=9) :: simulated_time_mod
73
74	INTEGER :: av, i, if, j, k, n, pos, prec, psi
75
76	LOGICAL :: found, resorted
77
78	REAL :: mean_r, s_r3, s_r4
79
80	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: local_pf
81
82	REAL, DIMENSION(:,:,:), POINTER :: to_be_resorted
83
84	!
85	!-- Return, if nothing to output
86	IF ( do3d_no(av) == 0 ) RETURN
87
88	CALL cpu_log (log_point(14),'data_output_3d','start')
89
90	!
91	!-- Open output file.
92	!-- Also creates coordinate and fld-file for AVS.
93	!-- For classic or 64bit NetCDF output or output of other (old) data formats,
94	!-- for a run on more than one PE, each PE opens its own file and
95	!-- writes the data of its subdomain in binary format (regardless of the format
96	!-- the user has requested). After the run, these files are combined to one
97	!-- file by combine_plot_fields in the format requested by the user (netcdf
98	!-- and/or avs).
99	!-- For NetCDF4/HDF5 output, data is written in parallel into one file.
100	IF ( netcdf_output ) THEN
101	IF ( netcdf_data_format < 3 ) THEN
102	CALL check_open( 30 )
103	IF ( myid == 0 ) CALL check_open( 106+av*10 )
104	ELSE
105	CALL check_open( 106+av*10 )
106	ENDIF
107	ELSE
108	IF ( avs_output .OR. ( numprocs > 1 ) ) CALL check_open( 30 )
109	ENDIF
110
111	!
112	!-- Allocate a temporary array with the desired output dimensions.
113	ALLOCATE( local_pf(nxlg:nxrg,nysg:nyng,nzb:nz_do3d) )
114
115	!
116	!-- Update the NetCDF time axis
117	#if defined( __netcdf )
118	IF ( myid == 0 .OR. netcdf_data_format > 2 ) THEN
119	do3d_time_count(av) = do3d_time_count(av) + 1
120	IF ( netcdf_output ) THEN
121	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
122	(/ time_since_reference_point /), &
123	start = (/ do3d_time_count(av) /), &
124	count = (/ 1 /) )
125	CALL handle_netcdf_error( 'data_output_3d', 376 )
126	ENDIF
127	ENDIF
128	#endif
129
130	!
131	!-- Loop over all variables to be written.
132	if = 1
133
134	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
135	!
136	!-- Set the precision for data compression.
137	IF ( do3d_compress ) THEN
138	DO i = 1, 100
139	IF ( plot_3d_precision(i)%variable == do3d(av,if) ) THEN
140	prec = plot_3d_precision(i)%precision
141	EXIT
142	ENDIF
143	ENDDO
144	ENDIF
145
146	!
147	!-- Store the array chosen on the temporary array.
148	resorted = .FALSE.
149	SELECT CASE ( TRIM( do3d(av,if) ) )
150
151	CASE ( 'e' )
152	IF ( av == 0 ) THEN
153	to_be_resorted => e
154	ELSE
155	to_be_resorted => e_av
156	ENDIF
157
158	CASE ( 'p' )
159	IF ( psolver == 'multigrid' .OR. psolver == 'sor' ) &
160	CALL exchange_horiz( p, nbgp )
161	IF ( av == 0 ) THEN
162	to_be_resorted => p
163	ELSE
164	to_be_resorted => p_av
165	ENDIF
166
167	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
168	IF ( av == 0 ) THEN
169	tend = prt_count
170	CALL exchange_horiz( tend, nbgp )
171	DO i = nxlg, nxrg
172	DO j = nysg, nyng
173	DO k = nzb, nz_do3d
174	local_pf(i,j,k) = tend(k,j,i)
175	ENDDO
176	ENDDO
177	ENDDO
178	resorted = .TRUE.
179	ELSE
180	CALL exchange_horiz( pc_av, nbgp )
181	to_be_resorted => pc_av
182	ENDIF
183
184	CASE ( 'pr' ) ! mean particle radius
185	IF ( av == 0 ) THEN
186	DO i = nxl, nxr
187	DO j = nys, nyn
188	DO k = nzb, nzt+1
189	psi = prt_start_index(k,j,i)
190	s_r3 = 0.0
191	s_r4 = 0.0
192	DO n = psi, psi+prt_count(k,j,i)-1
193	s_r3 = s_r3 + particles(n)%radius**3
194	s_r4 = s_r4 + particles(n)%radius**4
195	ENDDO
196	IF ( s_r3 /= 0.0 ) THEN
197	mean_r = s_r4 / s_r3
198	ELSE
199	mean_r = 0.0
200	ENDIF
201	tend(k,j,i) = mean_r
202	ENDDO
203	ENDDO
204	ENDDO
205	CALL exchange_horiz( tend, nbgp )
206	DO i = nxlg, nxrg
207	DO j = nysg, nyng
208	DO k = nzb, nzt+1
209	local_pf(i,j,k) = tend(k,j,i)
210	ENDDO
211	ENDDO
212	ENDDO
213	resorted = .TRUE.
214	ELSE
215	CALL exchange_horiz( pr_av, nbgp )
216	to_be_resorted => pr_av
217	ENDIF
218
219	CASE ( 'pt' )
220	IF ( av == 0 ) THEN
221	IF ( .NOT. cloud_physics ) THEN
222	to_be_resorted => pt
223	ELSE
224	DO i = nxlg, nxrg
225	DO j = nysg, nyng
226	DO k = nzb, nz_do3d
227	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
228	pt_d_t(k) * &
229	ql(k,j,i)
230	ENDDO
231	ENDDO
232	ENDDO
233	resorted = .TRUE.
234	ENDIF
235	ELSE
236	to_be_resorted => pt_av
237	ENDIF
238
239	CASE ( 'q' )
240	IF ( av == 0 ) THEN
241	to_be_resorted => q
242	ELSE
243	to_be_resorted => q_av
244	ENDIF
245
246	CASE ( 'ql' )
247	IF ( av == 0 ) THEN
248	to_be_resorted => ql
249	ELSE
250	to_be_resorted => ql_av
251	ENDIF
252
253	CASE ( 'ql_c' )
254	IF ( av == 0 ) THEN
255	to_be_resorted => ql_c
256	ELSE
257	to_be_resorted => ql_c_av
258	ENDIF
259
260	CASE ( 'ql_v' )
261	IF ( av == 0 ) THEN
262	to_be_resorted => ql_v
263	ELSE
264	to_be_resorted => ql_v_av
265	ENDIF
266
267	CASE ( 'ql_vp' )
268	IF ( av == 0 ) THEN
269	to_be_resorted => ql_vp
270	ELSE
271	to_be_resorted => ql_vp_av
272	ENDIF
273
274	CASE ( 'qv' )
275	IF ( av == 0 ) THEN
276	DO i = nxlg, nxrg
277	DO j = nysg, nyng
278	DO k = nzb, nz_do3d
279	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
280	ENDDO
281	ENDDO
282	ENDDO
283	resorted = .TRUE.
284	ELSE
285	to_be_resorted => qv_av
286	ENDIF
287
288	CASE ( 'rho' )
289	IF ( av == 0 ) THEN
290	to_be_resorted => rho
291	ELSE
292	to_be_resorted => rho_av
293	ENDIF
294
295	CASE ( 's' )
296	IF ( av == 0 ) THEN
297	to_be_resorted => q
298	ELSE
299	to_be_resorted => s_av
300	ENDIF
301
302	CASE ( 'sa' )
303	IF ( av == 0 ) THEN
304	to_be_resorted => sa
305	ELSE
306	to_be_resorted => sa_av
307	ENDIF
308
309	CASE ( 'u' )
310	IF ( av == 0 ) THEN
311	to_be_resorted => u
312	ELSE
313	to_be_resorted => u_av
314	ENDIF
315
316	CASE ( 'v' )
317	IF ( av == 0 ) THEN
318	to_be_resorted => v
319	ELSE
320	to_be_resorted => v_av
321	ENDIF
322
323	CASE ( 'vpt' )
324	IF ( av == 0 ) THEN
325	to_be_resorted => vpt
326	ELSE
327	to_be_resorted => vpt_av
328	ENDIF
329
330	CASE ( 'w' )
331	IF ( av == 0 ) THEN
332	to_be_resorted => w
333	ELSE
334	to_be_resorted => w_av
335	ENDIF
336
337	CASE DEFAULT
338	!
339	!-- User defined quantity
340	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
341	nz_do3d )
342	resorted = .TRUE.
343
344	IF ( .NOT. found ) THEN
345	message_string = 'no output available for: ' // &
346	TRIM( do3d(av,if) )
347	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
348	ENDIF
349
350	END SELECT
351
352	!
353	!-- Resort the array to be output, if not done above
354	IF ( .NOT. resorted ) THEN
355	DO i = nxlg, nxrg
356	DO j = nysg, nyng
357	DO k = nzb, nz_do3d
358	local_pf(i,j,k) = to_be_resorted(k,j,i)
359	ENDDO
360	ENDDO
361	ENDDO
362	ENDIF
363
364	!
365	!-- Output of the volume data information for the AVS-FLD-file.
366	do3d_avs_n = do3d_avs_n + 1
367	IF ( myid == 0 .AND. avs_output ) THEN
368	!
369	!-- AVS-labels must not contain any colons. Hence they must be removed
370	!-- from the time character string.
371	simulated_time_mod = simulated_time_chr
372	DO WHILE ( SCAN( simulated_time_mod, ':' ) /= 0 )
373	pos = SCAN( simulated_time_mod, ':' )
374	simulated_time_mod(pos:pos) = '/'
375	ENDDO
376
377	IF ( av == 0 ) THEN
378	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
379	skip_do_avs, TRIM( do3d(av,if) ), &
380	TRIM( simulated_time_mod )
381	ELSE
382	WRITE ( 33, 3300 ) do3d_avs_n, TRIM( avs_data_file ), &
383	skip_do_avs, TRIM( do3d(av,if) ) // &
384	' averaged', TRIM( simulated_time_mod )
385	ENDIF
386	!
387	!-- Determine the Skip-value for the next array. Record end and start
388	!-- require 4 byte each.
389	skip_do_avs = skip_do_avs + ( ((nx+2nbgp)(ny+2nbgp)(nz_do3d+1)) * 4 + 8 )
390	ENDIF
391
392	!
393	!-- Output of the 3D-array. (compressed/uncompressed)
394	IF ( do3d_compress ) THEN
395	!
396	!-- Compression, output of compression information on FLD-file and output
397	!-- of compressed data.
398	CALL write_compressed( local_pf, 30, 33, myid, nxl, nxr, nyn, nys, &
399	nzb, nz_do3d, prec, nbgp )
400	ELSE
401	!
402	!-- Uncompressed output.
403	#if defined( __parallel )
404	IF ( netcdf_output ) THEN
405	IF ( netcdf_data_format < 3 ) THEN
406	!
407	!-- Classic or 64bit format. Data is output in parallel in FORTRAN
408	!-- binary format here, and later collected into one file by
409	!-- combine_plot_fields
410	IF ( myid == 0 ) THEN
411	WRITE ( 30 ) time_since_reference_point, &
412	do3d_time_count(av), av
413	ENDIF
414	WRITE ( 30 ) nxlg, nxrg, nysg, nyng, nzb, nz_do3d
415	WRITE ( 30 ) local_pf
416
417	ELSE
418	#if defined( __netcdf )
419	!
420	!-- Output in NetCDF4/HDF5 format.
421	!-- Do not output redundant ghost point data except for the
422	!-- boundaries of the total domain.
423	IF ( nxr == nx .AND. nyn /= ny ) THEN
424	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
425	local_pf(nxl:nxrg,nys:nyn,nzb:nz_do3d), &
426	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
427	count = (/ nxr-nxl+1+nbgp, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
428	ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
429	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
430	local_pf(nxl:nxr,nys:nyng,nzb:nz_do3d), &
431	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
432	count = (/ nxr-nxl+1, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
433	ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
434	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
435	local_pf(nxl:nxrg,nys:nyng,nzb:nz_do3d), &
436	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
437	count = (/ nxr-nxl+1+nbgp, nyn-nys+1+nbgp, nz_do3d-nzb+1, 1 /) )
438	ELSE
439	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
440	local_pf(nxl:nxr,nys:nyn,nzb:nz_do3d), &
441	start = (/ nxl+1, nys+1, nzb+1, do3d_time_count(av) /), &
442	count = (/ nxr-nxl+1, nyn-nys+1, nz_do3d-nzb+1, 1 /) )
443	ENDIF
444	CALL handle_netcdf_error( 'data_output_3d', 386 )
445	#endif
446	ENDIF
447	ENDIF
448	#else
449	IF ( avs_output ) THEN
450	WRITE ( 30 ) local_pf(nxl:nxr+1,nys:nyn+1,:)
451	ENDIF
452	#if defined( __netcdf )
453	IF ( netcdf_output ) THEN
454
455	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
456	local_pf(nxl:nxr+1,nys:nyn+1,nzb:nz_do3d), &
457	start = (/ 1, 1, 1, do3d_time_count(av) /), &
458	count = (/ nx+2, ny+2, nz_do3d-nzb+1, 1 /) )
459	CALL handle_netcdf_error( 'data_output_3d', 446 )
460
461	ENDIF
462	#endif
463	#endif
464	ENDIF
465
466	if = if + 1
467
468	ENDDO
469
470	!
471	!-- Deallocate temporary array.
472	DEALLOCATE( local_pf )
473
474
475	CALL cpu_log (log_point(14),'data_output_3d','stop','nobarrier')
476
477	!
478	!-- Formats.
479	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
480	'label = ',A,A)
481
482	END SUBROUTINE data_output_3d

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