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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3582

Last change on this file since 3582 was 3582, checked in by suehring, 5 years ago
Merge branch salsa with trunk
Property svn:keywords set to `Id`
File size: 32.7 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	! Move the control parameter "salsa" from salsa_mod to control_parameters
23	! (M. Kurppa)
24	!
25	! Former revisions:
26	! -----------------
27	! $Id: data_output_3d.f90 3582 2018-11-29 19:16:36Z suehring $
28	! add variable description; rename variable 'if' into 'ivar'
29	!
30	! 3525 2018-11-14 16:06:14Z kanani
31	! Changes related to clean-up of biometeorology (dom_dwd_user)
32	!
33	! 3467 2018-10-30 19:05:21Z suehring
34	! Implementation of a new aerosol module salsa.
35	!
36	! 3448 2018-10-29 18:14:31Z kanani
37	! Adjustment of biometeorology calls
38	!
39	! 3421 2018-10-24 18:39:32Z gronemeier
40	! Renamed output variables
41	!
42	! 3419 2018-10-24 17:27:31Z gronemeier
43	! bugfix: nx, ny are required in non-parallel case
44	!
45	! 3337 2018-10-12 15:17:09Z kanani
46	! (from branch resler)
47	! Add Biometeorology
48	!
49	! 3294 2018-10-01 02:37:10Z raasch
50	! changes concerning modularization of ocean option
51	!
52	! 3274 2018-09-24 15:42:55Z knoop
53	! Modularization of all bulk cloud physics code components
54	!
55	! 3241 2018-09-12 15:02:00Z raasch
56	! unused variables and format statements removed
57	!
58	! 3049 2018-05-29 13:52:36Z Giersch
59	! Error messages revised
60	!
61	! 3045 2018-05-28 07:55:41Z Giersch
62	! Error message revised
63	!
64	! 3014 2018-05-09 08:42:38Z maronga
65	! Added nzb_do and nzt_do for some modules for 3d output
66	!
67	! 3004 2018-04-27 12:33:25Z Giersch
68	! Allocation checks implemented (averaged data will be assigned to fill values
69	! if no allocation happened so far)
70	!
71	! 2967 2018-04-13 11:22:08Z raasch
72	! bugfix: missing parallel cpp-directives added
73	!
74	! 2817 2018-02-19 16:32:21Z knoop
75	! Preliminary gust module interface implemented
76	!
77	! 2766 2018-01-22 17:17:47Z kanani
78	! Removed preprocessor directive __chem
79	!
80	! 2756 2018-01-16 18:11:14Z suehring
81	! Fill values for 3D output of chemical species introduced.
82	!
83	! 2746 2018-01-15 12:06:04Z suehring
84	! Move flag plant canopy to modules
85	!
86	! 2718 2018-01-02 08:49:38Z maronga
87	! Corrected "Former revisions" section
88	!
89	! 2696 2017-12-14 17:12:51Z kanani
90	! Change in file header (GPL part)
91	! Implementation of turbulence_closure_mod (TG)
92	! Implementation of chemistry module (FK)
93	! Set fill values at topography grid points or e.g. non-natural-type surface
94	! in case of LSM output (MS)
95	!
96	! 2512 2017-10-04 08:26:59Z raasch
97	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
98	! no output of ghost layer data
99	!
100	! 2292 2017-06-20 09:51:42Z schwenkel
101	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
102	! includes two more prognostic equations for cloud drop concentration (nc)
103	! and cloud water content (qc).
104	!
105	! 2233 2017-05-30 18:08:54Z suehring
106	!
107	! 2232 2017-05-30 17:47:52Z suehring
108	! Adjustments to new topography concept
109	!
110	! 2209 2017-04-19 09:34:46Z kanani
111	! Added plant canopy model output
112	!
113	! 2031 2016-10-21 15:11:58Z knoop
114	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
115	!
116	! 2011 2016-09-19 17:29:57Z kanani
117	! Flag urban_surface is now defined in module control_parameters,
118	! changed prefix for urban surface model output to "usm_",
119	! introduced control parameter varnamelength for LEN of trimvar.
120	!
121	! 2007 2016-08-24 15:47:17Z kanani
122	! Added support for new urban surface model (temporary modifications of
123	! SELECT CASE ( ) necessary, see variable trimvar)
124	!
125	! 2000 2016-08-20 18:09:15Z knoop
126	! Forced header and separation lines into 80 columns
127	!
128	! 1980 2016-07-29 15:51:57Z suehring
129	! Bugfix, in order to steer user-defined output, setting flag found explicitly
130	! to .F.
131	!
132	! 1976 2016-07-27 13:28:04Z maronga
133	! Output of radiation quantities is now done directly in the respective module
134	!
135	! 1972 2016-07-26 07:52:02Z maronga
136	! Output of land surface quantities is now done directly in the respective module.
137	! Unnecessary directive __parallel removed.
138	!
139	! 1960 2016-07-12 16:34:24Z suehring
140	! Scalar surface flux added
141	!
142	! 1849 2016-04-08 11:33:18Z hoffmann
143	! prr moved to arrays_3d
144	!
145	! 1822 2016-04-07 07:49:42Z hoffmann
146	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
147	!
148	! 1808 2016-04-05 19:44:00Z raasch
149	! test output removed
150	!
151	! 1783 2016-03-06 18:36:17Z raasch
152	! name change of netcdf routines and module + related changes
153	!
154	! 1745 2016-02-05 13:06:51Z gronemeier
155	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
156	!
157	! 1691 2015-10-26 16:17:44Z maronga
158	! Added output of radiative heating rates for RRTMG
159	!
160	! 1682 2015-10-07 23:56:08Z knoop
161	! Code annotations made doxygen readable
162	!
163	! 1585 2015-04-30 07:05:52Z maronga
164	! Added support for RRTMG
165	!
166	! 1551 2015-03-03 14:18:16Z maronga
167	! Added suppport for land surface model and radiation model output. In the course
168	! of this action, the limits for vertical loops have been changed (from nzb and
169	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
170	! Moreover, a new vertical grid zs was introduced.
171	!
172	! 1359 2014-04-11 17:15:14Z hoffmann
173	! New particle structure integrated.
174	!
175	! 1353 2014-04-08 15:21:23Z heinze
176	! REAL constants provided with KIND-attribute
177	!
178	! 1327 2014-03-21 11:00:16Z raasch
179	! parts concerning avs output removed,
180	! -netcdf output queries
181	!
182	! 1320 2014-03-20 08:40:49Z raasch
183	! ONLY-attribute added to USE-statements,
184	! kind-parameters added to all INTEGER and REAL declaration statements,
185	! kinds are defined in new module kinds,
186	! old module precision_kind is removed,
187	! revision history before 2012 removed,
188	! comment fields (!:) to be used for variable explanations added to
189	! all variable declaration statements
190	!
191	! 1318 2014-03-17 13:35:16Z raasch
192	! barrier argument removed from cpu_log,
193	! module interfaces removed
194	!
195	! 1308 2014-03-13 14:58:42Z fricke
196	! Check, if the limit of the time dimension is exceeded for parallel output
197	! To increase the performance for parallel output, the following is done:
198	! - Update of time axis is only done by PE0
199	!
200	! 1244 2013-10-31 08:16:56Z raasch
201	! Bugfix for index bounds in case of 3d-parallel output
202	!
203	! 1115 2013-03-26 18:16:16Z hoffmann
204	! ql is calculated by calc_liquid_water_content
205	!
206	! 1106 2013-03-04 05:31:38Z raasch
207	! array_kind renamed precision_kind
208	!
209	! 1076 2012-12-05 08:30:18Z hoffmann
210	! Bugfix in output of ql
211	!
212	! 1053 2012-11-13 17:11:03Z hoffmann
213	! +nr, qr, prr, qc and averaged quantities
214	!
215	! 1036 2012-10-22 13:43:42Z raasch
216	! code put under GPL (PALM 3.9)
217	!
218	! 1031 2012-10-19 14:35:30Z raasch
219	! netCDF4 without parallel file support implemented
220	!
221	! 1007 2012-09-19 14:30:36Z franke
222	! Bugfix: missing calculation of ql_vp added
223	!
224	! Revision 1.1 1997/09/03 06:29:36 raasch
225	! Initial revision
226	!
227	!
228	! Description:
229	! ------------
230	!> Output of the 3D-arrays in netCDF and/or AVS format.
231	!------------------------------------------------------------------------------!
232	SUBROUTINE data_output_3d( av )
233
234
235	USE arrays_3d, &
236	ONLY: d_exner, e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, s, &
237	tend, u, v, vpt, w
238
239	USE averaging
240
241	USE basic_constants_and_equations_mod, &
242	ONLY: lv_d_cp
243
244	USE biometeorology_mod, &
245	ONLY: bio_data_output_3d
246
247	USE bulk_cloud_model_mod, &
248	ONLY: bulk_cloud_model, bcm_data_output_3d
249
250	USE chemistry_model_mod, &
251	ONLY: chem_data_output_3d
252
253	USE control_parameters, &
254	ONLY: air_chemistry, biometeorology, do3d, do3d_no, do3d_time_count, &
255	io_blocks, io_group, land_surface, message_string, &
256	ntdim_3d, nz_do3d, ocean_mode, plant_canopy, &
257	psolver, salsa, simulated_time, time_since_reference_point, &
258	urban_surface, varnamelength
259
260	USE cpulog, &
261	ONLY: log_point, cpu_log
262
263	USE gust_mod, &
264	ONLY: gust_data_output_3d, gust_module_enabled
265
266	#if defined( __parallel )
267	USE indices, &
268	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
269	wall_flags_0
270	#else
271	USE indices, &
272	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
273	nzt, wall_flags_0
274	#endif
275
276	USE kinds
277
278	USE land_surface_model_mod, &
279	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
280
281	#if defined( __netcdf )
282	USE NETCDF
283	#endif
284
285	USE netcdf_interface, &
286	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
287	netcdf_data_format, netcdf_handle_error
288
289	USE ocean_mod, &
290	ONLY: ocean_data_output_3d
291
292	USE particle_attributes, &
293	ONLY: grid_particles, number_of_particles, particles, &
294	particle_advection_start, prt_count
295
296	USE pegrid
297
298	USE plant_canopy_model_mod, &
299	ONLY: pcm_data_output_3d
300
301	USE radiation_model_mod, &
302	ONLY: nzub, nzut, radiation, radiation_data_output_3d
303
304	USE salsa_mod, &
305	ONLY: salsa_data_output_3d
306
307	USE turbulence_closure_mod, &
308	ONLY: tcm_data_output_3d
309
310	USE urban_surface_mod, &
311	ONLY: usm_data_output_3d
312
313
314	IMPLICIT NONE
315
316	INTEGER(iwp) :: av !< flag for (non-)average output
317	INTEGER(iwp) :: flag_nr !< number of masking flag
318	INTEGER(iwp) :: i !< loop index
319	INTEGER(iwp) :: ivar !< variable index
320	INTEGER(iwp) :: j !< loop index
321	INTEGER(iwp) :: k !< loop index
322	INTEGER(iwp) :: n !< loop index
323	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
324	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
325
326	LOGICAL :: found !< true if output variable was found
327	LOGICAL :: resorted !< true if variable is resorted
328
329	REAL(wp) :: mean_r !< mean particle radius
330	REAL(wp) :: s_r2 !< sum( particle-radius**2 )
331	REAL(wp) :: s_r3 !< sum( particle-radius**3 )
332
333	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< output array
334
335	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< pointer to array which shall be output
336
337	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
338
339	!
340	!-- Return, if nothing to output
341	IF ( do3d_no(av) == 0 ) RETURN
342
343	CALL cpu_log (log_point(14),'data_output_3d','start')
344
345	!
346	!-- Open output file.
347	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
348	!-- own file and writes the data of its subdomain in binary format. After the
349	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
350	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
351	IF ( netcdf_data_format < 5 ) THEN
352	#if defined( __parallel )
353	CALL check_open( 30 )
354	#endif
355	IF ( myid == 0 ) CALL check_open( 106+av*10 )
356	ELSE
357	CALL check_open( 106+av*10 )
358	ENDIF
359
360	!
361	!-- For parallel netcdf output the time axis must be limited. Return, if this
362	!-- limit is exceeded. This could be the case, if the simulated time exceeds
363	!-- the given end time by the length of the given output interval.
364	IF ( netcdf_data_format > 4 ) THEN
365	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
366	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
367	simulated_time, '&because the maximum ', &
368	'number of output time levels is ', &
369	'exceeded.'
370	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
371	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
372	RETURN
373	ENDIF
374	ENDIF
375
376	!
377	!-- Update the netCDF time axis
378	!-- In case of parallel output, this is only done by PE0 to increase the
379	!-- performance.
380	#if defined( __netcdf )
381	do3d_time_count(av) = do3d_time_count(av) + 1
382	IF ( myid == 0 ) THEN
383	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
384	(/ time_since_reference_point /), &
385	start = (/ do3d_time_count(av) /), &
386	count = (/ 1 /) )
387	CALL netcdf_handle_error( 'data_output_3d', 376 )
388	ENDIF
389	#endif
390
391	!
392	!-- Loop over all variables to be written.
393	ivar = 1
394
395	DO WHILE ( do3d(av,ivar)(1:1) /= ' ' )
396
397	!
398	!-- Temporary solution to account for data output within the new urban
399	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
400	!-- Store the array chosen on the temporary array.
401	trimvar = TRIM( do3d(av,ivar) )
402	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
403	trimvar = 'usm_output'
404	resorted = .TRUE.
405	nzb_do = nzub
406	nzt_do = nzut
407	ELSE
408	resorted = .FALSE.
409	nzb_do = nzb
410	nzt_do = nz_do3d
411	ENDIF
412	!
413	!-- Set flag to steer output of radiation, land-surface, or user-defined
414	!-- quantities
415	found = .FALSE.
416	!
417	!-- Allocate a temporary array with the desired output dimensions.
418	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
419	!
420	!-- Before each output, set array local_pf to fill value
421	local_pf = fill_value
422	!
423	!-- Set masking flag for topography for not resorted arrays
424	flag_nr = 0
425
426	SELECT CASE ( trimvar )
427
428	CASE ( 'e' )
429	IF ( av == 0 ) THEN
430	to_be_resorted => e
431	ELSE
432	IF ( .NOT. ALLOCATED( e_av ) ) THEN
433	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
434	e_av = REAL( fill_value, KIND = wp )
435	ENDIF
436	to_be_resorted => e_av
437	ENDIF
438
439	CASE ( 'thetal' )
440	IF ( av == 0 ) THEN
441	to_be_resorted => pt
442	ELSE
443	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
444	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
445	lpt_av = REAL( fill_value, KIND = wp )
446	ENDIF
447	to_be_resorted => lpt_av
448	ENDIF
449
450	CASE ( 'p' )
451	IF ( av == 0 ) THEN
452	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
453	to_be_resorted => p
454	ELSE
455	IF ( .NOT. ALLOCATED( p_av ) ) THEN
456	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
457	p_av = REAL( fill_value, KIND = wp )
458	ENDIF
459	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
460	to_be_resorted => p_av
461	ENDIF
462
463	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
464	IF ( av == 0 ) THEN
465	IF ( simulated_time >= particle_advection_start ) THEN
466	tend = prt_count
467	ELSE
468	tend = 0.0_wp
469	ENDIF
470	DO i = nxl, nxr
471	DO j = nys, nyn
472	DO k = nzb_do, nzt_do
473	local_pf(i,j,k) = tend(k,j,i)
474	ENDDO
475	ENDDO
476	ENDDO
477	resorted = .TRUE.
478	ELSE
479	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
480	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
481	pc_av = REAL( fill_value, KIND = wp )
482	ENDIF
483	to_be_resorted => pc_av
484	ENDIF
485
486	CASE ( 'pr' ) ! mean particle radius (effective radius)
487	IF ( av == 0 ) THEN
488	IF ( simulated_time >= particle_advection_start ) THEN
489	DO i = nxl, nxr
490	DO j = nys, nyn
491	DO k = nzb_do, nzt_do
492	number_of_particles = prt_count(k,j,i)
493	IF (number_of_particles <= 0) CYCLE
494	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
495	s_r2 = 0.0_wp
496	s_r3 = 0.0_wp
497	DO n = 1, number_of_particles
498	IF ( particles(n)%particle_mask ) THEN
499	s_r2 = s_r2 + particles(n)%radius*2 &
500	particles(n)%weight_factor
501	s_r3 = s_r3 + particles(n)%radius*3 &
502	particles(n)%weight_factor
503	ENDIF
504	ENDDO
505	IF ( s_r2 > 0.0_wp ) THEN
506	mean_r = s_r3 / s_r2
507	ELSE
508	mean_r = 0.0_wp
509	ENDIF
510	tend(k,j,i) = mean_r
511	ENDDO
512	ENDDO
513	ENDDO
514	ELSE
515	tend = 0.0_wp
516	ENDIF
517	DO i = nxl, nxr
518	DO j = nys, nyn
519	DO k = nzb_do, nzt_do
520	local_pf(i,j,k) = tend(k,j,i)
521	ENDDO
522	ENDDO
523	ENDDO
524	resorted = .TRUE.
525	ELSE
526	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
527	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
528	pr_av = REAL( fill_value, KIND = wp )
529	ENDIF
530	to_be_resorted => pr_av
531	ENDIF
532
533	CASE ( 'theta' )
534	IF ( av == 0 ) THEN
535	IF ( .NOT. bulk_cloud_model ) THEN
536	to_be_resorted => pt
537	ELSE
538	DO i = nxl, nxr
539	DO j = nys, nyn
540	DO k = nzb_do, nzt_do
541	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
542	d_exner(k) * &
543	ql(k,j,i)
544	ENDDO
545	ENDDO
546	ENDDO
547	resorted = .TRUE.
548	ENDIF
549	ELSE
550	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
551	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
552	pt_av = REAL( fill_value, KIND = wp )
553	ENDIF
554	to_be_resorted => pt_av
555	ENDIF
556
557	CASE ( 'q' )
558	IF ( av == 0 ) THEN
559	to_be_resorted => q
560	ELSE
561	IF ( .NOT. ALLOCATED( q_av ) ) THEN
562	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
563	q_av = REAL( fill_value, KIND = wp )
564	ENDIF
565	to_be_resorted => q_av
566	ENDIF
567
568	CASE ( 'ql' )
569	IF ( av == 0 ) THEN
570	to_be_resorted => ql
571	ELSE
572	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
573	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
574	ql_av = REAL( fill_value, KIND = wp )
575	ENDIF
576	to_be_resorted => ql_av
577	ENDIF
578
579	CASE ( 'ql_c' )
580	IF ( av == 0 ) THEN
581	to_be_resorted => ql_c
582	ELSE
583	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
584	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
585	ql_c_av = REAL( fill_value, KIND = wp )
586	ENDIF
587	to_be_resorted => ql_c_av
588	ENDIF
589
590	CASE ( 'ql_v' )
591	IF ( av == 0 ) THEN
592	to_be_resorted => ql_v
593	ELSE
594	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
595	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
596	ql_v_av = REAL( fill_value, KIND = wp )
597	ENDIF
598	to_be_resorted => ql_v_av
599	ENDIF
600
601	CASE ( 'ql_vp' )
602	IF ( av == 0 ) THEN
603	IF ( simulated_time >= particle_advection_start ) THEN
604	DO i = nxl, nxr
605	DO j = nys, nyn
606	DO k = nzb_do, nzt_do
607	number_of_particles = prt_count(k,j,i)
608	IF (number_of_particles <= 0) CYCLE
609	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
610	DO n = 1, number_of_particles
611	IF ( particles(n)%particle_mask ) THEN
612	tend(k,j,i) = tend(k,j,i) + &
613	particles(n)%weight_factor / &
614	prt_count(k,j,i)
615	ENDIF
616	ENDDO
617	ENDDO
618	ENDDO
619	ENDDO
620	ELSE
621	tend = 0.0_wp
622	ENDIF
623	DO i = nxl, nxr
624	DO j = nys, nyn
625	DO k = nzb_do, nzt_do
626	local_pf(i,j,k) = tend(k,j,i)
627	ENDDO
628	ENDDO
629	ENDDO
630	resorted = .TRUE.
631	ELSE
632	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
633	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
634	ql_vp_av = REAL( fill_value, KIND = wp )
635	ENDIF
636	to_be_resorted => ql_vp_av
637	ENDIF
638
639	CASE ( 'qv' )
640	IF ( av == 0 ) THEN
641	DO i = nxl, nxr
642	DO j = nys, nyn
643	DO k = nzb_do, nzt_do
644	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
645	ENDDO
646	ENDDO
647	ENDDO
648	resorted = .TRUE.
649	ELSE
650	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
651	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
652	qv_av = REAL( fill_value, KIND = wp )
653	ENDIF
654	to_be_resorted => qv_av
655	ENDIF
656
657	CASE ( 's' )
658	IF ( av == 0 ) THEN
659	to_be_resorted => s
660	ELSE
661	IF ( .NOT. ALLOCATED( s_av ) ) THEN
662	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
663	s_av = REAL( fill_value, KIND = wp )
664	ENDIF
665	to_be_resorted => s_av
666	ENDIF
667
668	CASE ( 'u' )
669	flag_nr = 1
670	IF ( av == 0 ) THEN
671	to_be_resorted => u
672	ELSE
673	IF ( .NOT. ALLOCATED( u_av ) ) THEN
674	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
675	u_av = REAL( fill_value, KIND = wp )
676	ENDIF
677	to_be_resorted => u_av
678	ENDIF
679
680	CASE ( 'v' )
681	flag_nr = 2
682	IF ( av == 0 ) THEN
683	to_be_resorted => v
684	ELSE
685	IF ( .NOT. ALLOCATED( v_av ) ) THEN
686	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
687	v_av = REAL( fill_value, KIND = wp )
688	ENDIF
689	to_be_resorted => v_av
690	ENDIF
691
692	CASE ( 'thetav' )
693	IF ( av == 0 ) THEN
694	to_be_resorted => vpt
695	ELSE
696	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
697	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
698	vpt_av = REAL( fill_value, KIND = wp )
699	ENDIF
700	to_be_resorted => vpt_av
701	ENDIF
702
703	CASE ( 'w' )
704	flag_nr = 3
705	IF ( av == 0 ) THEN
706	to_be_resorted => w
707	ELSE
708	IF ( .NOT. ALLOCATED( w_av ) ) THEN
709	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
710	w_av = REAL( fill_value, KIND = wp )
711	ENDIF
712	to_be_resorted => w_av
713	ENDIF
714	!
715	!-- Block of urban surface model outputs
716	CASE ( 'usm_output' )
717	CALL usm_data_output_3d( av, do3d(av,ivar), found, local_pf, &
718	nzb_do, nzt_do )
719
720	CASE DEFAULT
721
722	!
723	!-- Quantities of other modules
724	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
725	CALL bcm_data_output_3d( av, do3d(av,ivar), found, local_pf, &
726	nzb_do, nzt_do )
727	resorted = .TRUE.
728	ENDIF
729
730	IF ( .NOT. found .AND. air_chemistry ) THEN
731	CALL chem_data_output_3d( av, do3d(av,ivar), found, &
732	local_pf, fill_value, nzb_do, nzt_do )
733	resorted = .TRUE.
734	ENDIF
735
736	IF ( .NOT. found .AND. gust_module_enabled ) THEN
737	CALL gust_data_output_3d( av, do3d(av,ivar), found, local_pf, &
738	nzb_do, nzt_do )
739	resorted = .TRUE.
740	ENDIF
741
742	IF ( .NOT. found .AND. land_surface ) THEN
743	!
744	!-- For soil model quantities, it is required to re-allocate local_pf
745	nzb_do = nzb_soil
746	nzt_do = nzt_soil
747
748	DEALLOCATE ( local_pf )
749	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
750	local_pf = fill_value
751
752	CALL lsm_data_output_3d( av, do3d(av,ivar), found, local_pf )
753	resorted = .TRUE.
754
755	!
756	!-- If no soil model variable was found, re-allocate local_pf
757	IF ( .NOT. found ) THEN
758	nzb_do = nzb
759	nzt_do = nz_do3d
760
761	DEALLOCATE ( local_pf )
762	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
763	ENDIF
764
765	ENDIF
766
767	IF ( .NOT. found .AND. ocean_mode ) THEN
768	CALL ocean_data_output_3d( av, do3d(av,ivar), found, local_pf, &
769	nzb_do, nzt_do )
770	resorted = .TRUE.
771	ENDIF
772
773	IF ( .NOT. found .AND. plant_canopy ) THEN
774	CALL pcm_data_output_3d( av, do3d(av,ivar), found, local_pf, &
775	fill_value, nzb_do, nzt_do )
776	resorted = .TRUE.
777	ENDIF
778
779	IF ( .NOT. found .AND. radiation ) THEN
780	CALL radiation_data_output_3d( av, do3d(av,ivar), found, &
781	local_pf, nzb_do, nzt_do )
782	resorted = .TRUE.
783	ENDIF
784
785	IF ( .NOT. found ) THEN
786	CALL tcm_data_output_3d( av, do3d(av,ivar), found, local_pf, &
787	nzb_do, nzt_do )
788	resorted = .TRUE.
789	ENDIF
790
791	!
792	!-- SALSA output
793	IF ( .NOT. found .AND. salsa ) THEN
794	CALL salsa_data_output_3d( av, do3d(av,ivar), found, local_pf, &
795	nzb_do, nzt_do )
796	resorted = .TRUE.
797	ENDIF
798
799	IF ( .NOT. found .AND. biometeorology ) THEN
800	CALL bio_data_output_3d( av, do3d(av,ivar), found, local_pf, &
801	nzb_do, nzt_do )
802	ENDIF
803
804	!
805	!-- User defined quantities
806	IF ( .NOT. found ) THEN
807	CALL user_data_output_3d( av, do3d(av,ivar), found, local_pf, &
808	nzb_do, nzt_do )
809	resorted = .TRUE.
810	ENDIF
811
812	IF ( .NOT. found ) THEN
813	message_string = 'no output available for: ' // &
814	TRIM( do3d(av,ivar) )
815	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
816	ENDIF
817
818	END SELECT
819
820	!
821	!-- Resort the array to be output, if not done above
822	IF ( .NOT. resorted ) THEN
823	DO i = nxl, nxr
824	DO j = nys, nyn
825	DO k = nzb_do, nzt_do
826	local_pf(i,j,k) = MERGE( &
827	to_be_resorted(k,j,i), &
828	REAL( fill_value, KIND = wp ), &
829	BTEST( wall_flags_0(k,j,i), flag_nr ) )
830	ENDDO
831	ENDDO
832	ENDDO
833	ENDIF
834
835	!
836	!-- Output of the 3D-array
837	#if defined( __parallel )
838	IF ( netcdf_data_format < 5 ) THEN
839	!
840	!-- Non-parallel netCDF output. Data is output in parallel in
841	!-- FORTRAN binary format here, and later collected into one file by
842	!-- combine_plot_fields
843	IF ( myid == 0 ) THEN
844	WRITE ( 30 ) time_since_reference_point, &
845	do3d_time_count(av), av
846	ENDIF
847	DO i = 0, io_blocks-1
848	IF ( i == io_group ) THEN
849	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
850	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
851	ENDIF
852
853	CALL MPI_BARRIER( comm2d, ierr )
854
855	ENDDO
856
857	ELSE
858	#if defined( __netcdf )
859	!
860	!-- Parallel output in netCDF4/HDF5 format.
861	! IF ( nxr == nx .AND. nyn /= ny ) THEN
862	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
863	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
864	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
865	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
866	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
867	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
868	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
869	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
870	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
871	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
872	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
873	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
874	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
875	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
876	! ELSE
877	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
878	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
879	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
880	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
881	! ENDIF
882	CALL netcdf_handle_error( 'data_output_3d', 386 )
883	#endif
884	ENDIF
885	#else
886	#if defined( __netcdf )
887	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,ivar), &
888	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
889	start = (/ 1, 1, 1, do3d_time_count(av) /), &
890	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
891	CALL netcdf_handle_error( 'data_output_3d', 446 )
892	#endif
893	#endif
894
895	ivar = ivar + 1
896
897	!
898	!-- Deallocate temporary array
899	DEALLOCATE ( local_pf )
900
901	ENDDO
902
903	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
904
905	END SUBROUTINE data_output_3d

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