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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3418

Last change on this file since 3418 was 3405, checked in by raasch, 6 years ago
bugfix: BIND attribute added to derived type particle_type, bugfix: nx, ny are required in non-parallel case
Property svn:keywords set to `Id`
File size: 31.5 KB

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1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3405 2018-10-23 15:34:41Z kanani $
27	! bugfix: nx, ny are required in non-parallel case
28	!
29	! 3337 2018-10-12 15:17:09Z kanani
30	! (from branch resler)
31	! Add Biometeorology
32	!
33	! 3294 2018-10-01 02:37:10Z raasch
34	! changes concerning modularization of ocean option
35	!
36	! 3274 2018-09-24 15:42:55Z knoop
37	! Modularization of all bulk cloud physics code components
38	!
39	! 3241 2018-09-12 15:02:00Z raasch
40	! unused variables and format statements removed
41	!
42	! 3049 2018-05-29 13:52:36Z Giersch
43	! Error messages revised
44	!
45	! 3045 2018-05-28 07:55:41Z Giersch
46	! Error message revised
47	!
48	! 3014 2018-05-09 08:42:38Z maronga
49	! Added nzb_do and nzt_do for some modules for 3d output
50	!
51	! 3004 2018-04-27 12:33:25Z Giersch
52	! Allocation checks implemented (averaged data will be assigned to fill values
53	! if no allocation happened so far)
54	!
55	! 2967 2018-04-13 11:22:08Z raasch
56	! bugfix: missing parallel cpp-directives added
57	!
58	! 2817 2018-02-19 16:32:21Z knoop
59	! Preliminary gust module interface implemented
60	!
61	! 2766 2018-01-22 17:17:47Z kanani
62	! Removed preprocessor directive __chem
63	!
64	! 2756 2018-01-16 18:11:14Z suehring
65	! Fill values for 3D output of chemical species introduced.
66	!
67	! 2746 2018-01-15 12:06:04Z suehring
68	! Move flag plant canopy to modules
69	!
70	! 2718 2018-01-02 08:49:38Z maronga
71	! Corrected "Former revisions" section
72	!
73	! 2696 2017-12-14 17:12:51Z kanani
74	! Change in file header (GPL part)
75	! Implementation of turbulence_closure_mod (TG)
76	! Implementation of chemistry module (FK)
77	! Set fill values at topography grid points or e.g. non-natural-type surface
78	! in case of LSM output (MS)
79	!
80	! 2512 2017-10-04 08:26:59Z raasch
81	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
82	! no output of ghost layer data
83	!
84	! 2292 2017-06-20 09:51:42Z schwenkel
85	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
86	! includes two more prognostic equations for cloud drop concentration (nc)
87	! and cloud water content (qc).
88	!
89	! 2233 2017-05-30 18:08:54Z suehring
90	!
91	! 2232 2017-05-30 17:47:52Z suehring
92	! Adjustments to new topography concept
93	!
94	! 2209 2017-04-19 09:34:46Z kanani
95	! Added plant canopy model output
96	!
97	! 2031 2016-10-21 15:11:58Z knoop
98	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
99	!
100	! 2011 2016-09-19 17:29:57Z kanani
101	! Flag urban_surface is now defined in module control_parameters,
102	! changed prefix for urban surface model output to "usm_",
103	! introduced control parameter varnamelength for LEN of trimvar.
104	!
105	! 2007 2016-08-24 15:47:17Z kanani
106	! Added support for new urban surface model (temporary modifications of
107	! SELECT CASE ( ) necessary, see variable trimvar)
108	!
109	! 2000 2016-08-20 18:09:15Z knoop
110	! Forced header and separation lines into 80 columns
111	!
112	! 1980 2016-07-29 15:51:57Z suehring
113	! Bugfix, in order to steer user-defined output, setting flag found explicitly
114	! to .F.
115	!
116	! 1976 2016-07-27 13:28:04Z maronga
117	! Output of radiation quantities is now done directly in the respective module
118	!
119	! 1972 2016-07-26 07:52:02Z maronga
120	! Output of land surface quantities is now done directly in the respective module.
121	! Unnecessary directive __parallel removed.
122	!
123	! 1960 2016-07-12 16:34:24Z suehring
124	! Scalar surface flux added
125	!
126	! 1849 2016-04-08 11:33:18Z hoffmann
127	! prr moved to arrays_3d
128	!
129	! 1822 2016-04-07 07:49:42Z hoffmann
130	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
131	!
132	! 1808 2016-04-05 19:44:00Z raasch
133	! test output removed
134	!
135	! 1783 2016-03-06 18:36:17Z raasch
136	! name change of netcdf routines and module + related changes
137	!
138	! 1745 2016-02-05 13:06:51Z gronemeier
139	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
140	!
141	! 1691 2015-10-26 16:17:44Z maronga
142	! Added output of radiative heating rates for RRTMG
143	!
144	! 1682 2015-10-07 23:56:08Z knoop
145	! Code annotations made doxygen readable
146	!
147	! 1585 2015-04-30 07:05:52Z maronga
148	! Added support for RRTMG
149	!
150	! 1551 2015-03-03 14:18:16Z maronga
151	! Added suppport for land surface model and radiation model output. In the course
152	! of this action, the limits for vertical loops have been changed (from nzb and
153	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
154	! Moreover, a new vertical grid zs was introduced.
155	!
156	! 1359 2014-04-11 17:15:14Z hoffmann
157	! New particle structure integrated.
158	!
159	! 1353 2014-04-08 15:21:23Z heinze
160	! REAL constants provided with KIND-attribute
161	!
162	! 1327 2014-03-21 11:00:16Z raasch
163	! parts concerning avs output removed,
164	! -netcdf output queries
165	!
166	! 1320 2014-03-20 08:40:49Z raasch
167	! ONLY-attribute added to USE-statements,
168	! kind-parameters added to all INTEGER and REAL declaration statements,
169	! kinds are defined in new module kinds,
170	! old module precision_kind is removed,
171	! revision history before 2012 removed,
172	! comment fields (!:) to be used for variable explanations added to
173	! all variable declaration statements
174	!
175	! 1318 2014-03-17 13:35:16Z raasch
176	! barrier argument removed from cpu_log,
177	! module interfaces removed
178	!
179	! 1308 2014-03-13 14:58:42Z fricke
180	! Check, if the limit of the time dimension is exceeded for parallel output
181	! To increase the performance for parallel output, the following is done:
182	! - Update of time axis is only done by PE0
183	!
184	! 1244 2013-10-31 08:16:56Z raasch
185	! Bugfix for index bounds in case of 3d-parallel output
186	!
187	! 1115 2013-03-26 18:16:16Z hoffmann
188	! ql is calculated by calc_liquid_water_content
189	!
190	! 1106 2013-03-04 05:31:38Z raasch
191	! array_kind renamed precision_kind
192	!
193	! 1076 2012-12-05 08:30:18Z hoffmann
194	! Bugfix in output of ql
195	!
196	! 1053 2012-11-13 17:11:03Z hoffmann
197	! +nr, qr, prr, qc and averaged quantities
198	!
199	! 1036 2012-10-22 13:43:42Z raasch
200	! code put under GPL (PALM 3.9)
201	!
202	! 1031 2012-10-19 14:35:30Z raasch
203	! netCDF4 without parallel file support implemented
204	!
205	! 1007 2012-09-19 14:30:36Z franke
206	! Bugfix: missing calculation of ql_vp added
207	!
208	! Revision 1.1 1997/09/03 06:29:36 raasch
209	! Initial revision
210	!
211	!
212	! Description:
213	! ------------
214	!> Output of the 3D-arrays in netCDF and/or AVS format.
215	!------------------------------------------------------------------------------!
216	SUBROUTINE data_output_3d( av )
217
218
219	USE arrays_3d, &
220	ONLY: d_exner, e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, s, &
221	tend, u, v, vpt, w
222
223	USE averaging
224
225	USE basic_constants_and_equations_mod, &
226	ONLY: lv_d_cp
227
228	USE bulk_cloud_model_mod, &
229	ONLY: bulk_cloud_model, bcm_data_output_3d
230
231	USE chemistry_model_mod, &
232	ONLY: chem_data_output_3d
233
234	USE control_parameters, &
235	ONLY: air_chemistry, do3d, do3d_no, do3d_time_count, &
236	io_blocks, io_group, land_surface, message_string, &
237	ntdim_3d, nz_do3d, ocean_mode, plant_canopy, &
238	psolver, simulated_time, time_since_reference_point, &
239	urban_surface, varnamelength
240
241	USE cpulog, &
242	ONLY: log_point, cpu_log
243
244	USE gust_mod, &
245	ONLY: gust_data_output_3d, gust_module_enabled
246
247	#if defined( __parallel )
248	USE indices, &
249	ONLY: nbgp, nxl, nxlg, nxr, nxrg, nyn, nyng, nys, nysg, nzb, nzt, &
250	wall_flags_0
251	#else
252	USE indices, &
253	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
254	nzt, wall_flags_0
255	#endif
256
257	USE kinds
258
259	USE land_surface_model_mod, &
260	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
261
262	#if defined( __netcdf )
263	USE NETCDF
264	#endif
265
266	USE netcdf_interface, &
267	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
268	netcdf_data_format, netcdf_handle_error
269
270	USE ocean_mod, &
271	ONLY: ocean_data_output_3d
272
273	USE particle_attributes, &
274	ONLY: grid_particles, number_of_particles, particles, &
275	particle_advection_start, prt_count
276
277	USE pegrid
278
279	USE plant_canopy_model_mod, &
280	ONLY: pcm_data_output_3d
281
282	USE radiation_model_mod, &
283	ONLY: nzub, nzut, radiation, radiation_data_output_3d
284
285	USE biometeorology_mod, &
286	ONLY: biometeorology_data_output_3d
287
288	USE turbulence_closure_mod, &
289	ONLY: tcm_data_output_3d
290
291	USE urban_surface_mod, &
292	ONLY: usm_data_output_3d
293
294
295	IMPLICIT NONE
296
297	INTEGER(iwp) :: av !<
298	INTEGER(iwp) :: flag_nr !< number of masking flag
299	INTEGER(iwp) :: i !<
300	INTEGER(iwp) :: if !<
301	INTEGER(iwp) :: j !<
302	INTEGER(iwp) :: k !<
303	INTEGER(iwp) :: n !<
304	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
305	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
306
307	LOGICAL :: found !<
308	LOGICAL :: resorted !<
309
310	REAL(wp) :: mean_r !<
311	REAL(wp) :: s_r2 !<
312	REAL(wp) :: s_r3 !<
313
314	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
315
316	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
317
318	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
319
320	!
321	!-- Return, if nothing to output
322	IF ( do3d_no(av) == 0 ) RETURN
323
324	CALL cpu_log (log_point(14),'data_output_3d','start')
325
326	!
327	!-- Open output file.
328	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
329	!-- own file and writes the data of its subdomain in binary format. After the
330	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
331	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
332	IF ( netcdf_data_format < 5 ) THEN
333	#if defined( __parallel )
334	CALL check_open( 30 )
335	#endif
336	IF ( myid == 0 ) CALL check_open( 106+av*10 )
337	ELSE
338	CALL check_open( 106+av*10 )
339	ENDIF
340
341	!
342	!-- For parallel netcdf output the time axis must be limited. Return, if this
343	!-- limit is exceeded. This could be the case, if the simulated time exceeds
344	!-- the given end time by the length of the given output interval.
345	IF ( netcdf_data_format > 4 ) THEN
346	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
347	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
348	simulated_time, '&because the maximum ', &
349	'number of output time levels is ', &
350	'exceeded.'
351	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
352	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
353	RETURN
354	ENDIF
355	ENDIF
356
357	!
358	!-- Update the netCDF time axis
359	!-- In case of parallel output, this is only done by PE0 to increase the
360	!-- performance.
361	#if defined( __netcdf )
362	do3d_time_count(av) = do3d_time_count(av) + 1
363	IF ( myid == 0 ) THEN
364	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
365	(/ time_since_reference_point /), &
366	start = (/ do3d_time_count(av) /), &
367	count = (/ 1 /) )
368	CALL netcdf_handle_error( 'data_output_3d', 376 )
369	ENDIF
370	#endif
371
372	!
373	!-- Loop over all variables to be written.
374	if = 1
375
376	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
377
378	!
379	!-- Temporary solution to account for data output within the new urban
380	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
381	!-- Store the array chosen on the temporary array.
382	trimvar = TRIM( do3d(av,if) )
383	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
384	trimvar = 'usm_output'
385	resorted = .TRUE.
386	nzb_do = nzub
387	nzt_do = nzut
388	ELSE
389	resorted = .FALSE.
390	nzb_do = nzb
391	nzt_do = nz_do3d
392	ENDIF
393	!
394	!-- Set flag to steer output of radiation, land-surface, or user-defined
395	!-- quantities
396	found = .FALSE.
397	!
398	!-- Allocate a temporary array with the desired output dimensions.
399	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
400	!
401	!-- Before each output, set array local_pf to fill value
402	local_pf = fill_value
403	!
404	!-- Set masking flag for topography for not resorted arrays
405	flag_nr = 0
406
407	SELECT CASE ( trimvar )
408
409	CASE ( 'e' )
410	IF ( av == 0 ) THEN
411	to_be_resorted => e
412	ELSE
413	IF ( .NOT. ALLOCATED( e_av ) ) THEN
414	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
415	e_av = REAL( fill_value, KIND = wp )
416	ENDIF
417	to_be_resorted => e_av
418	ENDIF
419
420	CASE ( 'lpt' )
421	IF ( av == 0 ) THEN
422	to_be_resorted => pt
423	ELSE
424	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
425	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
426	lpt_av = REAL( fill_value, KIND = wp )
427	ENDIF
428	to_be_resorted => lpt_av
429	ENDIF
430
431	CASE ( 'p' )
432	IF ( av == 0 ) THEN
433	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
434	to_be_resorted => p
435	ELSE
436	IF ( .NOT. ALLOCATED( p_av ) ) THEN
437	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
438	p_av = REAL( fill_value, KIND = wp )
439	ENDIF
440	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
441	to_be_resorted => p_av
442	ENDIF
443
444	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
445	IF ( av == 0 ) THEN
446	IF ( simulated_time >= particle_advection_start ) THEN
447	tend = prt_count
448	ELSE
449	tend = 0.0_wp
450	ENDIF
451	DO i = nxl, nxr
452	DO j = nys, nyn
453	DO k = nzb_do, nzt_do
454	local_pf(i,j,k) = tend(k,j,i)
455	ENDDO
456	ENDDO
457	ENDDO
458	resorted = .TRUE.
459	ELSE
460	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
461	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
462	pc_av = REAL( fill_value, KIND = wp )
463	ENDIF
464	to_be_resorted => pc_av
465	ENDIF
466
467	CASE ( 'pr' ) ! mean particle radius (effective radius)
468	IF ( av == 0 ) THEN
469	IF ( simulated_time >= particle_advection_start ) THEN
470	DO i = nxl, nxr
471	DO j = nys, nyn
472	DO k = nzb_do, nzt_do
473	number_of_particles = prt_count(k,j,i)
474	IF (number_of_particles <= 0) CYCLE
475	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
476	s_r2 = 0.0_wp
477	s_r3 = 0.0_wp
478	DO n = 1, number_of_particles
479	IF ( particles(n)%particle_mask ) THEN
480	s_r2 = s_r2 + particles(n)%radius*2 &
481	particles(n)%weight_factor
482	s_r3 = s_r3 + particles(n)%radius*3 &
483	particles(n)%weight_factor
484	ENDIF
485	ENDDO
486	IF ( s_r2 > 0.0_wp ) THEN
487	mean_r = s_r3 / s_r2
488	ELSE
489	mean_r = 0.0_wp
490	ENDIF
491	tend(k,j,i) = mean_r
492	ENDDO
493	ENDDO
494	ENDDO
495	ELSE
496	tend = 0.0_wp
497	ENDIF
498	DO i = nxl, nxr
499	DO j = nys, nyn
500	DO k = nzb_do, nzt_do
501	local_pf(i,j,k) = tend(k,j,i)
502	ENDDO
503	ENDDO
504	ENDDO
505	resorted = .TRUE.
506	ELSE
507	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
508	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
509	pr_av = REAL( fill_value, KIND = wp )
510	ENDIF
511	to_be_resorted => pr_av
512	ENDIF
513
514	CASE ( 'pt' )
515	IF ( av == 0 ) THEN
516	IF ( .NOT. bulk_cloud_model ) THEN
517	to_be_resorted => pt
518	ELSE
519	DO i = nxl, nxr
520	DO j = nys, nyn
521	DO k = nzb_do, nzt_do
522	local_pf(i,j,k) = pt(k,j,i) + lv_d_cp * &
523	d_exner(k) * &
524	ql(k,j,i)
525	ENDDO
526	ENDDO
527	ENDDO
528	resorted = .TRUE.
529	ENDIF
530	ELSE
531	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
532	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
533	pt_av = REAL( fill_value, KIND = wp )
534	ENDIF
535	to_be_resorted => pt_av
536	ENDIF
537
538	CASE ( 'q' )
539	IF ( av == 0 ) THEN
540	to_be_resorted => q
541	ELSE
542	IF ( .NOT. ALLOCATED( q_av ) ) THEN
543	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
544	q_av = REAL( fill_value, KIND = wp )
545	ENDIF
546	to_be_resorted => q_av
547	ENDIF
548
549	CASE ( 'ql' )
550	IF ( av == 0 ) THEN
551	to_be_resorted => ql
552	ELSE
553	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
554	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
555	ql_av = REAL( fill_value, KIND = wp )
556	ENDIF
557	to_be_resorted => ql_av
558	ENDIF
559
560	CASE ( 'ql_c' )
561	IF ( av == 0 ) THEN
562	to_be_resorted => ql_c
563	ELSE
564	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
565	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
566	ql_c_av = REAL( fill_value, KIND = wp )
567	ENDIF
568	to_be_resorted => ql_c_av
569	ENDIF
570
571	CASE ( 'ql_v' )
572	IF ( av == 0 ) THEN
573	to_be_resorted => ql_v
574	ELSE
575	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
576	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
577	ql_v_av = REAL( fill_value, KIND = wp )
578	ENDIF
579	to_be_resorted => ql_v_av
580	ENDIF
581
582	CASE ( 'ql_vp' )
583	IF ( av == 0 ) THEN
584	IF ( simulated_time >= particle_advection_start ) THEN
585	DO i = nxl, nxr
586	DO j = nys, nyn
587	DO k = nzb_do, nzt_do
588	number_of_particles = prt_count(k,j,i)
589	IF (number_of_particles <= 0) CYCLE
590	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
591	DO n = 1, number_of_particles
592	IF ( particles(n)%particle_mask ) THEN
593	tend(k,j,i) = tend(k,j,i) + &
594	particles(n)%weight_factor / &
595	prt_count(k,j,i)
596	ENDIF
597	ENDDO
598	ENDDO
599	ENDDO
600	ENDDO
601	ELSE
602	tend = 0.0_wp
603	ENDIF
604	DO i = nxl, nxr
605	DO j = nys, nyn
606	DO k = nzb_do, nzt_do
607	local_pf(i,j,k) = tend(k,j,i)
608	ENDDO
609	ENDDO
610	ENDDO
611	resorted = .TRUE.
612	ELSE
613	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
614	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
615	ql_vp_av = REAL( fill_value, KIND = wp )
616	ENDIF
617	to_be_resorted => ql_vp_av
618	ENDIF
619
620	CASE ( 'qv' )
621	IF ( av == 0 ) THEN
622	DO i = nxl, nxr
623	DO j = nys, nyn
624	DO k = nzb_do, nzt_do
625	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
626	ENDDO
627	ENDDO
628	ENDDO
629	resorted = .TRUE.
630	ELSE
631	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
632	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
633	qv_av = REAL( fill_value, KIND = wp )
634	ENDIF
635	to_be_resorted => qv_av
636	ENDIF
637
638	CASE ( 's' )
639	IF ( av == 0 ) THEN
640	to_be_resorted => s
641	ELSE
642	IF ( .NOT. ALLOCATED( s_av ) ) THEN
643	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
644	s_av = REAL( fill_value, KIND = wp )
645	ENDIF
646	to_be_resorted => s_av
647	ENDIF
648
649	CASE ( 'u' )
650	flag_nr = 1
651	IF ( av == 0 ) THEN
652	to_be_resorted => u
653	ELSE
654	IF ( .NOT. ALLOCATED( u_av ) ) THEN
655	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
656	u_av = REAL( fill_value, KIND = wp )
657	ENDIF
658	to_be_resorted => u_av
659	ENDIF
660
661	CASE ( 'v' )
662	flag_nr = 2
663	IF ( av == 0 ) THEN
664	to_be_resorted => v
665	ELSE
666	IF ( .NOT. ALLOCATED( v_av ) ) THEN
667	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
668	v_av = REAL( fill_value, KIND = wp )
669	ENDIF
670	to_be_resorted => v_av
671	ENDIF
672
673	CASE ( 'vpt' )
674	IF ( av == 0 ) THEN
675	to_be_resorted => vpt
676	ELSE
677	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
678	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
679	vpt_av = REAL( fill_value, KIND = wp )
680	ENDIF
681	to_be_resorted => vpt_av
682	ENDIF
683
684	CASE ( 'w' )
685	flag_nr = 3
686	IF ( av == 0 ) THEN
687	to_be_resorted => w
688	ELSE
689	IF ( .NOT. ALLOCATED( w_av ) ) THEN
690	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
691	w_av = REAL( fill_value, KIND = wp )
692	ENDIF
693	to_be_resorted => w_av
694	ENDIF
695	!
696	!-- Block of urban surface model outputs
697	CASE ( 'usm_output' )
698	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
699	nzb_do, nzt_do )
700
701	CASE DEFAULT
702
703	!
704	!-- Quantities of other modules
705	IF ( .NOT. found .AND. bulk_cloud_model ) THEN
706	CALL bcm_data_output_3d( av, do3d(av,if), found, local_pf, &
707	nzb_do, nzt_do )
708	resorted = .TRUE.
709	ENDIF
710
711	IF ( .NOT. found .AND. air_chemistry ) THEN
712	CALL chem_data_output_3d( av, do3d(av,if), found, &
713	local_pf, fill_value, nzb_do, nzt_do )
714	resorted = .TRUE.
715	ENDIF
716
717	IF ( .NOT. found .AND. gust_module_enabled ) THEN
718	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
719	nzb_do, nzt_do )
720	resorted = .TRUE.
721	ENDIF
722
723	IF ( .NOT. found .AND. land_surface ) THEN
724	!
725	!-- For soil model quantities, it is required to re-allocate local_pf
726	nzb_do = nzb_soil
727	nzt_do = nzt_soil
728
729	DEALLOCATE ( local_pf )
730	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
731	local_pf = fill_value
732
733	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
734	resorted = .TRUE.
735
736	!
737	!-- If no soil model variable was found, re-allocate local_pf
738	IF ( .NOT. found ) THEN
739	nzb_do = nzb
740	nzt_do = nz_do3d
741
742	DEALLOCATE ( local_pf )
743	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
744	ENDIF
745
746	ENDIF
747
748	IF ( .NOT. found .AND. ocean_mode ) THEN
749	CALL ocean_data_output_3d( av, do3d(av,if), found, local_pf, &
750	nzb_do, nzt_do )
751	resorted = .TRUE.
752	ENDIF
753
754	IF ( .NOT. found .AND. plant_canopy ) THEN
755	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
756	fill_value, nzb_do, nzt_do )
757	resorted = .TRUE.
758	ENDIF
759
760	IF ( .NOT. found .AND. radiation ) THEN
761	CALL radiation_data_output_3d( av, do3d(av,if), found, &
762	local_pf, nzb_do, nzt_do )
763	resorted = .TRUE.
764	ENDIF
765
766	!
767	!-- Biometeorology quantity
768	IF ( .NOT. found .AND. radiation ) THEN
769	CALL biometeorology_data_output_3d( av, do3d(av,if), found, &
770	local_pf, nzb_do, nzt_do )
771	resorted = .TRUE.
772	ENDIF
773
774	IF ( .NOT. found ) THEN
775	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf, &
776	nzb_do, nzt_do )
777	resorted = .TRUE.
778	ENDIF
779
780	!
781	!-- User defined quantities
782	IF ( .NOT. found ) THEN
783	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
784	nzb_do, nzt_do )
785	resorted = .TRUE.
786	ENDIF
787
788	IF ( .NOT. found ) THEN
789	message_string = 'no output available for: ' // &
790	TRIM( do3d(av,if) )
791	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
792	ENDIF
793
794	END SELECT
795
796	!
797	!-- Resort the array to be output, if not done above
798	IF ( .NOT. resorted ) THEN
799	DO i = nxl, nxr
800	DO j = nys, nyn
801	DO k = nzb_do, nzt_do
802	local_pf(i,j,k) = MERGE( &
803	to_be_resorted(k,j,i), &
804	REAL( fill_value, KIND = wp ), &
805	BTEST( wall_flags_0(k,j,i), flag_nr ) )
806	ENDDO
807	ENDDO
808	ENDDO
809	ENDIF
810
811	!
812	!-- Output of the 3D-array
813	#if defined( __parallel )
814	IF ( netcdf_data_format < 5 ) THEN
815	!
816	!-- Non-parallel netCDF output. Data is output in parallel in
817	!-- FORTRAN binary format here, and later collected into one file by
818	!-- combine_plot_fields
819	IF ( myid == 0 ) THEN
820	WRITE ( 30 ) time_since_reference_point, &
821	do3d_time_count(av), av
822	ENDIF
823	DO i = 0, io_blocks-1
824	IF ( i == io_group ) THEN
825	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
826	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
827	ENDIF
828
829	CALL MPI_BARRIER( comm2d, ierr )
830
831	ENDDO
832
833	ELSE
834	#if defined( __netcdf )
835	!
836	!-- Parallel output in netCDF4/HDF5 format.
837	! IF ( nxr == nx .AND. nyn /= ny ) THEN
838	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
839	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
840	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
841	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
842	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
843	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
844	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
845	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
846	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
847	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
848	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
849	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
850	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
851	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
852	! ELSE
853	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
854	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
855	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
856	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
857	! ENDIF
858	CALL netcdf_handle_error( 'data_output_3d', 386 )
859	#endif
860	ENDIF
861	#else
862	#if defined( __netcdf )
863	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
864	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
865	start = (/ 1, 1, 1, do3d_time_count(av) /), &
866	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
867	CALL netcdf_handle_error( 'data_output_3d', 446 )
868	#endif
869	#endif
870
871	if = if + 1
872
873	!
874	!-- Deallocate temporary array
875	DEALLOCATE ( local_pf )
876
877	ENDDO
878
879	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
880
881	END SUBROUTINE data_output_3d

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