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source: palm/trunk/SOURCE/data_output_3d.f90 @ 3004

Last change on this file since 3004 was 3004, checked in by Giersch, 6 years ago
precipitation_rate removed, further allocation checks for data output of averaged quantities implemented, double CALL of flow_statistics at the beginning of time_integration removed, further minor bugfixes, comments added
Property svn:keywords set to `Id`
File size: 32.7 KB

Line
1	!> @file data_output_3d.f90
2	!------------------------------------------------------------------------------!
3	! This file is part of the PALM model system.
4	!
5	! PALM is free software: you can redistribute it and/or modify it under the
6	! terms of the GNU General Public License as published by the Free Software
7	! Foundation, either version 3 of the License, or (at your option) any later
8	! version.
9	!
10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
13	!
14	! You should have received a copy of the GNU General Public License along with
15	! PALM. If not, see <http://www.gnu.org/licenses/>.
16	!
17	! Copyright 1997-2018 Leibniz Universitaet Hannover
18	!------------------------------------------------------------------------------!
19	!
20	! Current revisions:
21	! ------------------
22	!
23	!
24	! Former revisions:
25	! -----------------
26	! $Id: data_output_3d.f90 3004 2018-04-27 12:33:25Z Giersch $
27	! Allocation checks implemented (averaged data will be assigned to fill values
28	! if no allocation happened so far)
29	!
30	! 2967 2018-04-13 11:22:08Z raasch
31	! bugfix: missing parallel cpp-directives added
32	!
33	! 2817 2018-02-19 16:32:21Z knoop
34	! Preliminary gust module interface implemented
35	!
36	! 2766 2018-01-22 17:17:47Z kanani
37	! Removed preprocessor directive __chem
38	!
39	! 2756 2018-01-16 18:11:14Z suehring
40	! Fill values for 3D output of chemical species introduced.
41	!
42	! 2746 2018-01-15 12:06:04Z suehring
43	! Move flag plant canopy to modules
44	!
45	! 2718 2018-01-02 08:49:38Z maronga
46	! Corrected "Former revisions" section
47	!
48	! 2696 2017-12-14 17:12:51Z kanani
49	! Change in file header (GPL part)
50	! Implementation of turbulence_closure_mod (TG)
51	! Implementation of chemistry module (FK)
52	! Set fill values at topography grid points or e.g. non-natural-type surface
53	! in case of LSM output (MS)
54	!
55	! 2512 2017-10-04 08:26:59Z raasch
56	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
57	! no output of ghost layer data
58	!
59	! 2292 2017-06-20 09:51:42Z schwenkel
60	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
61	! includes two more prognostic equations for cloud drop concentration (nc)
62	! and cloud water content (qc).
63	!
64	! 2233 2017-05-30 18:08:54Z suehring
65	!
66	! 2232 2017-05-30 17:47:52Z suehring
67	! Adjustments to new topography concept
68	!
69	! 2209 2017-04-19 09:34:46Z kanani
70	! Added plant canopy model output
71	!
72	! 2031 2016-10-21 15:11:58Z knoop
73	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
74	!
75	! 2011 2016-09-19 17:29:57Z kanani
76	! Flag urban_surface is now defined in module control_parameters,
77	! changed prefix for urban surface model output to "usm_",
78	! introduced control parameter varnamelength for LEN of trimvar.
79	!
80	! 2007 2016-08-24 15:47:17Z kanani
81	! Added support for new urban surface model (temporary modifications of
82	! SELECT CASE ( ) necessary, see variable trimvar)
83	!
84	! 2000 2016-08-20 18:09:15Z knoop
85	! Forced header and separation lines into 80 columns
86	!
87	! 1980 2016-07-29 15:51:57Z suehring
88	! Bugfix, in order to steer user-defined output, setting flag found explicitly
89	! to .F.
90	!
91	! 1976 2016-07-27 13:28:04Z maronga
92	! Output of radiation quantities is now done directly in the respective module
93	!
94	! 1972 2016-07-26 07:52:02Z maronga
95	! Output of land surface quantities is now done directly in the respective module.
96	! Unnecessary directive __parallel removed.
97	!
98	! 1960 2016-07-12 16:34:24Z suehring
99	! Scalar surface flux added
100	!
101	! 1849 2016-04-08 11:33:18Z hoffmann
102	! prr moved to arrays_3d
103	!
104	! 1822 2016-04-07 07:49:42Z hoffmann
105	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
106	!
107	! 1808 2016-04-05 19:44:00Z raasch
108	! test output removed
109	!
110	! 1783 2016-03-06 18:36:17Z raasch
111	! name change of netcdf routines and module + related changes
112	!
113	! 1745 2016-02-05 13:06:51Z gronemeier
114	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
115	!
116	! 1691 2015-10-26 16:17:44Z maronga
117	! Added output of radiative heating rates for RRTMG
118	!
119	! 1682 2015-10-07 23:56:08Z knoop
120	! Code annotations made doxygen readable
121	!
122	! 1585 2015-04-30 07:05:52Z maronga
123	! Added support for RRTMG
124	!
125	! 1551 2015-03-03 14:18:16Z maronga
126	! Added suppport for land surface model and radiation model output. In the course
127	! of this action, the limits for vertical loops have been changed (from nzb and
128	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
129	! Moreover, a new vertical grid zs was introduced.
130	!
131	! 1359 2014-04-11 17:15:14Z hoffmann
132	! New particle structure integrated.
133	!
134	! 1353 2014-04-08 15:21:23Z heinze
135	! REAL constants provided with KIND-attribute
136	!
137	! 1327 2014-03-21 11:00:16Z raasch
138	! parts concerning avs output removed,
139	! -netcdf output queries
140	!
141	! 1320 2014-03-20 08:40:49Z raasch
142	! ONLY-attribute added to USE-statements,
143	! kind-parameters added to all INTEGER and REAL declaration statements,
144	! kinds are defined in new module kinds,
145	! old module precision_kind is removed,
146	! revision history before 2012 removed,
147	! comment fields (!:) to be used for variable explanations added to
148	! all variable declaration statements
149	!
150	! 1318 2014-03-17 13:35:16Z raasch
151	! barrier argument removed from cpu_log,
152	! module interfaces removed
153	!
154	! 1308 2014-03-13 14:58:42Z fricke
155	! Check, if the limit of the time dimension is exceeded for parallel output
156	! To increase the performance for parallel output, the following is done:
157	! - Update of time axis is only done by PE0
158	!
159	! 1244 2013-10-31 08:16:56Z raasch
160	! Bugfix for index bounds in case of 3d-parallel output
161	!
162	! 1115 2013-03-26 18:16:16Z hoffmann
163	! ql is calculated by calc_liquid_water_content
164	!
165	! 1106 2013-03-04 05:31:38Z raasch
166	! array_kind renamed precision_kind
167	!
168	! 1076 2012-12-05 08:30:18Z hoffmann
169	! Bugfix in output of ql
170	!
171	! 1053 2012-11-13 17:11:03Z hoffmann
172	! +nr, qr, prr, qc and averaged quantities
173	!
174	! 1036 2012-10-22 13:43:42Z raasch
175	! code put under GPL (PALM 3.9)
176	!
177	! 1031 2012-10-19 14:35:30Z raasch
178	! netCDF4 without parallel file support implemented
179	!
180	! 1007 2012-09-19 14:30:36Z franke
181	! Bugfix: missing calculation of ql_vp added
182	!
183	! Revision 1.1 1997/09/03 06:29:36 raasch
184	! Initial revision
185	!
186	!
187	! Description:
188	! ------------
189	!> Output of the 3D-arrays in netCDF and/or AVS format.
190	!------------------------------------------------------------------------------!
191	SUBROUTINE data_output_3d( av )
192
193
194	USE arrays_3d, &
195	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
196	sa, tend, u, v, vpt, w
197
198	USE averaging
199
200	USE chemistry_model_mod, &
201	ONLY: chem_data_output_3d
202
203	USE cloud_parameters, &
204	ONLY: l_d_cp, pt_d_t
205
206	USE control_parameters, &
207	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
208	io_blocks, io_group, land_surface, message_string, &
209	ntdim_3d, nz_do3d, plant_canopy, &
210	psolver, simulated_time, time_since_reference_point, &
211	urban_surface, varnamelength
212
213	USE cpulog, &
214	ONLY: log_point, cpu_log
215
216	USE gust_mod, &
217	ONLY: gust_data_output_3d, gust_module_enabled
218
219	USE indices, &
220	ONLY: nbgp, nx, nxl, nxlg, nxr, nxrg, ny, nyn, nyng, nys, nysg, nzb, &
221	nzt, wall_flags_0
222
223	USE kinds
224
225	USE land_surface_model_mod, &
226	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
227
228	#if defined( __netcdf )
229	USE NETCDF
230	#endif
231
232	USE netcdf_interface, &
233	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
234	netcdf_data_format, netcdf_handle_error
235
236	USE particle_attributes, &
237	ONLY: grid_particles, number_of_particles, particles, &
238	particle_advection_start, prt_count
239
240	USE pegrid
241
242	USE plant_canopy_model_mod, &
243	ONLY: pcm_data_output_3d
244
245	USE radiation_model_mod, &
246	ONLY: nzub, nzut, radiation, radiation_data_output_3d
247
248	USE turbulence_closure_mod, &
249	ONLY: tcm_data_output_3d
250
251	USE urban_surface_mod, &
252	ONLY: usm_data_output_3d
253
254
255	IMPLICIT NONE
256
257	INTEGER(iwp) :: av !<
258	INTEGER(iwp) :: flag_nr !< number of masking flag
259	INTEGER(iwp) :: i !<
260	INTEGER(iwp) :: if !<
261	INTEGER(iwp) :: j !<
262	INTEGER(iwp) :: k !<
263	INTEGER(iwp) :: n !<
264	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
265	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
266
267	LOGICAL :: found !<
268	LOGICAL :: resorted !<
269
270	REAL(wp) :: mean_r !<
271	REAL(wp) :: s_r2 !<
272	REAL(wp) :: s_r3 !<
273
274	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
275
276	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
277
278	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
279
280	!
281	!-- Return, if nothing to output
282	IF ( do3d_no(av) == 0 ) RETURN
283
284	CALL cpu_log (log_point(14),'data_output_3d','start')
285
286	!
287	!-- Open output file.
288	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
289	!-- own file and writes the data of its subdomain in binary format. After the
290	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
291	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
292	IF ( netcdf_data_format < 5 ) THEN
293	#if defined( __parallel )
294	CALL check_open( 30 )
295	#endif
296	IF ( myid == 0 ) CALL check_open( 106+av*10 )
297	ELSE
298	CALL check_open( 106+av*10 )
299	ENDIF
300
301	!
302	!-- For parallel netcdf output the time axis must be limited. Return, if this
303	!-- limit is exceeded. This could be the case, if the simulated time exceeds
304	!-- the given end time by the length of the given output interval.
305	IF ( netcdf_data_format > 4 ) THEN
306	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
307	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
308	simulated_time, '&because the maximum ', &
309	'number of output time levels is ', &
310	'exceeded.'
311	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
312	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
313	RETURN
314	ENDIF
315	ENDIF
316
317	!
318	!-- Update the netCDF time axis
319	!-- In case of parallel output, this is only done by PE0 to increase the
320	!-- performance.
321	#if defined( __netcdf )
322	do3d_time_count(av) = do3d_time_count(av) + 1
323	IF ( myid == 0 ) THEN
324	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
325	(/ time_since_reference_point /), &
326	start = (/ do3d_time_count(av) /), &
327	count = (/ 1 /) )
328	CALL netcdf_handle_error( 'data_output_3d', 376 )
329	ENDIF
330	#endif
331
332	!
333	!-- Loop over all variables to be written.
334	if = 1
335
336	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
337
338	!
339	!-- Temporary solution to account for data output within the new urban
340	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
341	!-- Store the array chosen on the temporary array.
342	trimvar = TRIM( do3d(av,if) )
343	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
344	trimvar = 'usm_output'
345	resorted = .TRUE.
346	nzb_do = nzub
347	nzt_do = nzut
348	ELSE
349	resorted = .FALSE.
350	nzb_do = nzb
351	nzt_do = nz_do3d
352	ENDIF
353	!
354	!-- Set flag to steer output of radiation, land-surface, or user-defined
355	!-- quantities
356	found = .FALSE.
357	!
358	!-- Allocate a temporary array with the desired output dimensions.
359	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
360	!
361	!-- Before each output, set array local_pf to fill value
362	local_pf = fill_value
363	!
364	!-- Set masking flag for topography for not resorted arrays
365	flag_nr = 0
366
367	SELECT CASE ( trimvar )
368
369	CASE ( 'e' )
370	IF ( av == 0 ) THEN
371	to_be_resorted => e
372	ELSE
373	IF ( .NOT. ALLOCATED( e_av ) ) THEN
374	ALLOCATE( e_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
375	e_av = REAL( fill_value, KIND = wp )
376	ENDIF
377	to_be_resorted => e_av
378	ENDIF
379
380	CASE ( 'lpt' )
381	IF ( av == 0 ) THEN
382	to_be_resorted => pt
383	ELSE
384	IF ( .NOT. ALLOCATED( lpt_av ) ) THEN
385	ALLOCATE( lpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
386	lpt_av = REAL( fill_value, KIND = wp )
387	ENDIF
388	to_be_resorted => lpt_av
389	ENDIF
390
391	CASE ( 'nc' )
392	IF ( av == 0 ) THEN
393	to_be_resorted => nc
394	ELSE
395	IF ( .NOT. ALLOCATED( nc_av ) ) THEN
396	ALLOCATE( nc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
397	nc_av = REAL( fill_value, KIND = wp )
398	ENDIF
399	to_be_resorted => nc_av
400	ENDIF
401
402	CASE ( 'nr' )
403	IF ( av == 0 ) THEN
404	to_be_resorted => nr
405	ELSE
406	IF ( .NOT. ALLOCATED( nr_av ) ) THEN
407	ALLOCATE( nr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
408	nr_av = REAL( fill_value, KIND = wp )
409	ENDIF
410	to_be_resorted => nr_av
411	ENDIF
412
413	CASE ( 'p' )
414	IF ( av == 0 ) THEN
415	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
416	to_be_resorted => p
417	ELSE
418	IF ( .NOT. ALLOCATED( p_av ) ) THEN
419	ALLOCATE( p_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
420	p_av = REAL( fill_value, KIND = wp )
421	ENDIF
422	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
423	to_be_resorted => p_av
424	ENDIF
425
426	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
427	IF ( av == 0 ) THEN
428	IF ( simulated_time >= particle_advection_start ) THEN
429	tend = prt_count
430	ELSE
431	tend = 0.0_wp
432	ENDIF
433	DO i = nxl, nxr
434	DO j = nys, nyn
435	DO k = nzb_do, nzt_do
436	local_pf(i,j,k) = tend(k,j,i)
437	ENDDO
438	ENDDO
439	ENDDO
440	resorted = .TRUE.
441	ELSE
442	IF ( .NOT. ALLOCATED( pc_av ) ) THEN
443	ALLOCATE( pc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
444	pc_av = REAL( fill_value, KIND = wp )
445	ENDIF
446	to_be_resorted => pc_av
447	ENDIF
448
449	CASE ( 'pr' ) ! mean particle radius (effective radius)
450	IF ( av == 0 ) THEN
451	IF ( simulated_time >= particle_advection_start ) THEN
452	DO i = nxl, nxr
453	DO j = nys, nyn
454	DO k = nzb_do, nzt_do
455	number_of_particles = prt_count(k,j,i)
456	IF (number_of_particles <= 0) CYCLE
457	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
458	s_r2 = 0.0_wp
459	s_r3 = 0.0_wp
460	DO n = 1, number_of_particles
461	IF ( particles(n)%particle_mask ) THEN
462	s_r2 = s_r2 + particles(n)%radius*2 &
463	particles(n)%weight_factor
464	s_r3 = s_r3 + particles(n)%radius*3 &
465	particles(n)%weight_factor
466	ENDIF
467	ENDDO
468	IF ( s_r2 > 0.0_wp ) THEN
469	mean_r = s_r3 / s_r2
470	ELSE
471	mean_r = 0.0_wp
472	ENDIF
473	tend(k,j,i) = mean_r
474	ENDDO
475	ENDDO
476	ENDDO
477	ELSE
478	tend = 0.0_wp
479	ENDIF
480	DO i = nxl, nxr
481	DO j = nys, nyn
482	DO k = nzb_do, nzt_do
483	local_pf(i,j,k) = tend(k,j,i)
484	ENDDO
485	ENDDO
486	ENDDO
487	resorted = .TRUE.
488	ELSE
489	IF ( .NOT. ALLOCATED( pr_av ) ) THEN
490	ALLOCATE( pr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
491	pr_av = REAL( fill_value, KIND = wp )
492	ENDIF
493	to_be_resorted => pr_av
494	ENDIF
495
496	CASE ( 'prr' )
497	IF ( av == 0 ) THEN
498	DO i = nxl, nxr
499	DO j = nys, nyn
500	DO k = nzb_do, nzt_do
501	local_pf(i,j,k) = prr(k,j,i)
502	ENDDO
503	ENDDO
504	ENDDO
505	ELSE
506	IF ( .NOT. ALLOCATED( prr_av ) ) THEN
507	ALLOCATE( prr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
508	prr_av = REAL( fill_value, KIND = wp )
509	ENDIF
510	DO i = nxl, nxr
511	DO j = nys, nyn
512	DO k = nzb_do, nzt_do
513	local_pf(i,j,k) = prr_av(k,j,i)
514	ENDDO
515	ENDDO
516	ENDDO
517	ENDIF
518	resorted = .TRUE.
519
520	CASE ( 'pt' )
521	IF ( av == 0 ) THEN
522	IF ( .NOT. cloud_physics ) THEN
523	to_be_resorted => pt
524	ELSE
525	DO i = nxl, nxr
526	DO j = nys, nyn
527	DO k = nzb_do, nzt_do
528	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
529	pt_d_t(k) * &
530	ql(k,j,i)
531	ENDDO
532	ENDDO
533	ENDDO
534	resorted = .TRUE.
535	ENDIF
536	ELSE
537	IF ( .NOT. ALLOCATED( pt_av ) ) THEN
538	ALLOCATE( pt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
539	pt_av = REAL( fill_value, KIND = wp )
540	ENDIF
541	to_be_resorted => pt_av
542	ENDIF
543
544	CASE ( 'q' )
545	IF ( av == 0 ) THEN
546	to_be_resorted => q
547	ELSE
548	IF ( .NOT. ALLOCATED( q_av ) ) THEN
549	ALLOCATE( q_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
550	q_av = REAL( fill_value, KIND = wp )
551	ENDIF
552	to_be_resorted => q_av
553	ENDIF
554
555	CASE ( 'qc' )
556	IF ( av == 0 ) THEN
557	to_be_resorted => qc
558	ELSE
559	IF ( .NOT. ALLOCATED( qc_av ) ) THEN
560	ALLOCATE( qc_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
561	qc_av = REAL( fill_value, KIND = wp )
562	ENDIF
563	to_be_resorted => qc_av
564	ENDIF
565
566	CASE ( 'ql' )
567	IF ( av == 0 ) THEN
568	to_be_resorted => ql
569	ELSE
570	IF ( .NOT. ALLOCATED( ql_av ) ) THEN
571	ALLOCATE( ql_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
572	ql_av = REAL( fill_value, KIND = wp )
573	ENDIF
574	to_be_resorted => ql_av
575	ENDIF
576
577	CASE ( 'ql_c' )
578	IF ( av == 0 ) THEN
579	to_be_resorted => ql_c
580	ELSE
581	IF ( .NOT. ALLOCATED( ql_c_av ) ) THEN
582	ALLOCATE( ql_c_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
583	ql_c_av = REAL( fill_value, KIND = wp )
584	ENDIF
585	to_be_resorted => ql_c_av
586	ENDIF
587
588	CASE ( 'ql_v' )
589	IF ( av == 0 ) THEN
590	to_be_resorted => ql_v
591	ELSE
592	IF ( .NOT. ALLOCATED( ql_v_av ) ) THEN
593	ALLOCATE( ql_v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
594	ql_v_av = REAL( fill_value, KIND = wp )
595	ENDIF
596	to_be_resorted => ql_v_av
597	ENDIF
598
599	CASE ( 'ql_vp' )
600	IF ( av == 0 ) THEN
601	IF ( simulated_time >= particle_advection_start ) THEN
602	DO i = nxl, nxr
603	DO j = nys, nyn
604	DO k = nzb_do, nzt_do
605	number_of_particles = prt_count(k,j,i)
606	IF (number_of_particles <= 0) CYCLE
607	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
608	DO n = 1, number_of_particles
609	IF ( particles(n)%particle_mask ) THEN
610	tend(k,j,i) = tend(k,j,i) + &
611	particles(n)%weight_factor / &
612	prt_count(k,j,i)
613	ENDIF
614	ENDDO
615	ENDDO
616	ENDDO
617	ENDDO
618	ELSE
619	tend = 0.0_wp
620	ENDIF
621	DO i = nxl, nxr
622	DO j = nys, nyn
623	DO k = nzb_do, nzt_do
624	local_pf(i,j,k) = tend(k,j,i)
625	ENDDO
626	ENDDO
627	ENDDO
628	resorted = .TRUE.
629	ELSE
630	IF ( .NOT. ALLOCATED( ql_vp_av ) ) THEN
631	ALLOCATE( ql_vp_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
632	ql_vp_av = REAL( fill_value, KIND = wp )
633	ENDIF
634	to_be_resorted => ql_vp_av
635	ENDIF
636
637	CASE ( 'qr' )
638	IF ( av == 0 ) THEN
639	to_be_resorted => qr
640	ELSE
641	IF ( .NOT. ALLOCATED( qr_av ) ) THEN
642	ALLOCATE( qr_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
643	qr_av = REAL( fill_value, KIND = wp )
644	ENDIF
645	to_be_resorted => qr_av
646	ENDIF
647
648	CASE ( 'qv' )
649	IF ( av == 0 ) THEN
650	DO i = nxl, nxr
651	DO j = nys, nyn
652	DO k = nzb_do, nzt_do
653	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
654	ENDDO
655	ENDDO
656	ENDDO
657	resorted = .TRUE.
658	ELSE
659	IF ( .NOT. ALLOCATED( qv_av ) ) THEN
660	ALLOCATE( qv_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
661	qv_av = REAL( fill_value, KIND = wp )
662	ENDIF
663	to_be_resorted => qv_av
664	ENDIF
665
666	CASE ( 'rho_ocean' )
667	IF ( av == 0 ) THEN
668	to_be_resorted => rho_ocean
669	ELSE
670	IF ( .NOT. ALLOCATED( rho_ocean_av ) ) THEN
671	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
672	u_av = REAL( fill_value, KIND = wp )
673	ENDIF
674	to_be_resorted => rho_ocean_av
675	ENDIF
676
677	CASE ( 's' )
678	IF ( av == 0 ) THEN
679	to_be_resorted => s
680	ELSE
681	IF ( .NOT. ALLOCATED( s_av ) ) THEN
682	ALLOCATE( s_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
683	s_av = REAL( fill_value, KIND = wp )
684	ENDIF
685	to_be_resorted => s_av
686	ENDIF
687
688	CASE ( 'sa' )
689	IF ( av == 0 ) THEN
690	to_be_resorted => sa
691	ELSE
692	IF ( .NOT. ALLOCATED( sa_av ) ) THEN
693	ALLOCATE( sa_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
694	sa_av = REAL( fill_value, KIND = wp )
695	ENDIF
696	to_be_resorted => sa_av
697	ENDIF
698
699	CASE ( 'u' )
700	flag_nr = 1
701	IF ( av == 0 ) THEN
702	to_be_resorted => u
703	ELSE
704	IF ( .NOT. ALLOCATED( u_av ) ) THEN
705	ALLOCATE( u_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
706	u_av = REAL( fill_value, KIND = wp )
707	ENDIF
708	to_be_resorted => u_av
709	ENDIF
710
711	CASE ( 'v' )
712	flag_nr = 2
713	IF ( av == 0 ) THEN
714	to_be_resorted => v
715	ELSE
716	IF ( .NOT. ALLOCATED( v_av ) ) THEN
717	ALLOCATE( v_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
718	v_av = REAL( fill_value, KIND = wp )
719	ENDIF
720	to_be_resorted => v_av
721	ENDIF
722
723	CASE ( 'vpt' )
724	IF ( av == 0 ) THEN
725	to_be_resorted => vpt
726	ELSE
727	IF ( .NOT. ALLOCATED( vpt_av ) ) THEN
728	ALLOCATE( vpt_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
729	vpt_av = REAL( fill_value, KIND = wp )
730	ENDIF
731	to_be_resorted => vpt_av
732	ENDIF
733
734	CASE ( 'w' )
735	flag_nr = 3
736	IF ( av == 0 ) THEN
737	to_be_resorted => w
738	ELSE
739	IF ( .NOT. ALLOCATED( w_av ) ) THEN
740	ALLOCATE( w_av(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
741	w_av = REAL( fill_value, KIND = wp )
742	ENDIF
743	to_be_resorted => w_av
744	ENDIF
745	!
746	!-- Block of urban surface model outputs
747	CASE ( 'usm_output' )
748	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
749	nzb_do, nzt_do )
750
751	CASE DEFAULT
752
753	!
754	!-- Land surface quantity
755	IF ( land_surface ) THEN
756	!
757	!-- For soil model quantities, it is required to re-allocate local_pf
758	nzb_do = nzb_soil
759	nzt_do = nzt_soil
760
761	DEALLOCATE ( local_pf )
762	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
763	local_pf = fill_value
764
765	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
766	resorted = .TRUE.
767
768	!
769	!-- If no soil model variable was found, re-allocate local_pf
770	IF ( .NOT. found ) THEN
771	nzb_do = nzb
772	nzt_do = nz_do3d
773
774	DEALLOCATE ( local_pf )
775	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
776	ENDIF
777
778	ENDIF
779
780	IF ( .NOT. found ) THEN
781	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf )
782	resorted = .TRUE.
783	ENDIF
784
785	!
786	!-- Radiation quantity
787	IF ( .NOT. found .AND. radiation ) THEN
788	CALL radiation_data_output_3d( av, do3d(av,if), found, &
789	local_pf )
790	resorted = .TRUE.
791	ENDIF
792
793	!
794	!-- Gust module quantities
795	IF ( .NOT. found .AND. gust_module_enabled ) THEN
796	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
797	nzb_do, nzt_do )
798	resorted = .TRUE.
799	ENDIF
800
801	!
802	!-- Chemistry model output
803	IF ( .NOT. found .AND. air_chemistry ) THEN
804	CALL chem_data_output_3d( av, do3d(av,if), found, &
805	local_pf, fill_value )
806	resorted = .TRUE.
807	ENDIF
808
809	!
810	!-- Plant canopy model output
811	IF ( .NOT. found .AND. plant_canopy ) THEN
812	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
813	fill_value )
814	resorted = .TRUE.
815	ENDIF
816
817	!
818	!-- User defined quantity
819	IF ( .NOT. found ) THEN
820	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
821	nzb_do, nzt_do )
822	resorted = .TRUE.
823	ENDIF
824
825	IF ( .NOT. found ) THEN
826	message_string = 'no output available for: ' // &
827	TRIM( do3d(av,if) )
828	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
829	ENDIF
830
831	END SELECT
832
833	!
834	!-- Resort the array to be output, if not done above
835	IF ( .NOT. resorted ) THEN
836	DO i = nxl, nxr
837	DO j = nys, nyn
838	DO k = nzb_do, nzt_do
839	local_pf(i,j,k) = MERGE( &
840	to_be_resorted(k,j,i), &
841	REAL( fill_value, KIND = wp ), &
842	BTEST( wall_flags_0(k,j,i), flag_nr ) )
843	ENDDO
844	ENDDO
845	ENDDO
846	ENDIF
847
848	!
849	!-- Output of the 3D-array
850	#if defined( __parallel )
851	IF ( netcdf_data_format < 5 ) THEN
852	!
853	!-- Non-parallel netCDF output. Data is output in parallel in
854	!-- FORTRAN binary format here, and later collected into one file by
855	!-- combine_plot_fields
856	IF ( myid == 0 ) THEN
857	WRITE ( 30 ) time_since_reference_point, &
858	do3d_time_count(av), av
859	ENDIF
860	DO i = 0, io_blocks-1
861	IF ( i == io_group ) THEN
862	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
863	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
864	ENDIF
865
866	CALL MPI_BARRIER( comm2d, ierr )
867
868	ENDDO
869
870	ELSE
871	#if defined( __netcdf )
872	!
873	!-- Parallel output in netCDF4/HDF5 format.
874	! IF ( nxr == nx .AND. nyn /= ny ) THEN
875	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
876	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
877	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
878	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
879	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
880	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
881	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
882	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
883	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
884	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
885	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
886	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
887	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
888	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
889	! ELSE
890	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
891	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
892	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
893	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
894	! ENDIF
895	CALL netcdf_handle_error( 'data_output_3d', 386 )
896	#endif
897	ENDIF
898	#else
899	#if defined( __netcdf )
900	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
901	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
902	start = (/ 1, 1, 1, do3d_time_count(av) /), &
903	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
904	CALL netcdf_handle_error( 'data_output_3d', 446 )
905	#endif
906	#endif
907
908	if = if + 1
909
910	!
911	!-- Deallocate temporary array
912	DEALLOCATE ( local_pf )
913
914	ENDDO
915
916	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
917
918	!
919	!-- Formats.
920	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
921	'label = ',A,A)
922
923	END SUBROUTINE data_output_3d

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