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source: palm/trunk/SOURCE/data_output_3d.f90 @ 2967

Last change on this file since 2967 was 2967, checked in by raasch, 6 years ago
bugfix: missing parallel cpp-directives added
Property svn:keywords set to `Id`
File size: 27.8 KB

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[1682]	1	!> @file data_output_3d.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[2718]	17	! Copyright 1997-2018 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[254]	20	! Current revisions:
[1106]	21	! ------------------
[1961]	22	!
[2233]	23	!
[1552]	24	! Former revisions:
	25	! -----------------
	26	! $Id: data_output_3d.f90 2967 2018-04-13 11:22:08Z raasch $
[2967]	27	! bugfix: missing parallel cpp-directives added
	28	!
	29	! 2817 2018-02-19 16:32:21Z knoop
[2817]	30	! Preliminary gust module interface implemented
	31	!
	32	! 2766 2018-01-22 17:17:47Z kanani
[2766]	33	! Removed preprocessor directive __chem
	34	!
	35	! 2756 2018-01-16 18:11:14Z suehring
[2756]	36	! Fill values for 3D output of chemical species introduced.
	37	!
	38	! 2746 2018-01-15 12:06:04Z suehring
[2746]	39	! Move flag plant canopy to modules
	40	!
	41	! 2718 2018-01-02 08:49:38Z maronga
[2716]	42	! Corrected "Former revisions" section
	43	!
	44	! 2696 2017-12-14 17:12:51Z kanani
	45	! Change in file header (GPL part)
[2696]	46	! Implementation of turbulence_closure_mod (TG)
	47	! Implementation of chemistry module (FK)
	48	! Set fill values at topography grid points or e.g. non-natural-type surface
	49	! in case of LSM output (MS)
	50	!
	51	! 2512 2017-10-04 08:26:59Z raasch
[2512]	52	! upper bounds of 3d output changed from nx+1,ny+1 to nx,ny
	53	! no output of ghost layer data
	54	!
	55	! 2292 2017-06-20 09:51:42Z schwenkel
[2292]	56	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	57	! includes two more prognostic equations for cloud drop concentration (nc)
	58	! and cloud water content (qc).
	59	!
	60	! 2233 2017-05-30 18:08:54Z suehring
[1552]	61	!
[2233]	62	! 2232 2017-05-30 17:47:52Z suehring
	63	! Adjustments to new topography concept
	64	!
[2210]	65	! 2209 2017-04-19 09:34:46Z kanani
	66	! Added plant canopy model output
	67	!
[2032]	68	! 2031 2016-10-21 15:11:58Z knoop
	69	! renamed variable rho to rho_ocean and rho_av to rho_ocean_av
	70	!
[2012]	71	! 2011 2016-09-19 17:29:57Z kanani
	72	! Flag urban_surface is now defined in module control_parameters,
	73	! changed prefix for urban surface model output to "usm_",
	74	! introduced control parameter varnamelength for LEN of trimvar.
	75	!
[2008]	76	! 2007 2016-08-24 15:47:17Z kanani
	77	! Added support for new urban surface model (temporary modifications of
	78	! SELECT CASE ( ) necessary, see variable trimvar)
	79	!
[2001]	80	! 2000 2016-08-20 18:09:15Z knoop
	81	! Forced header and separation lines into 80 columns
	82	!
[1981]	83	! 1980 2016-07-29 15:51:57Z suehring
	84	! Bugfix, in order to steer user-defined output, setting flag found explicitly
	85	! to .F.
	86	!
[1977]	87	! 1976 2016-07-27 13:28:04Z maronga
	88	! Output of radiation quantities is now done directly in the respective module
	89	!
[1973]	90	! 1972 2016-07-26 07:52:02Z maronga
	91	! Output of land surface quantities is now done directly in the respective module.
	92	! Unnecessary directive __parallel removed.
	93	!
[1961]	94	! 1960 2016-07-12 16:34:24Z suehring
	95	! Scalar surface flux added
	96	!
[1851]	97	! 1849 2016-04-08 11:33:18Z hoffmann
	98	! prr moved to arrays_3d
	99	!
[1823]	100	! 1822 2016-04-07 07:49:42Z hoffmann
	101	! prr vertical dimensions set to nzb_do to nzt_do. Unused variables deleted.
	102	!
[1809]	103	! 1808 2016-04-05 19:44:00Z raasch
	104	! test output removed
	105	!
[1784]	106	! 1783 2016-03-06 18:36:17Z raasch
	107	! name change of netcdf routines and module + related changes
	108	!
[1746]	109	! 1745 2016-02-05 13:06:51Z gronemeier
	110	! Bugfix: test if time axis limit exceeds moved to point after call of check_open
	111	!
[1692]	112	! 1691 2015-10-26 16:17:44Z maronga
	113	! Added output of radiative heating rates for RRTMG
	114	!
[1683]	115	! 1682 2015-10-07 23:56:08Z knoop
	116	! Code annotations made doxygen readable
	117	!
[1586]	118	! 1585 2015-04-30 07:05:52Z maronga
	119	! Added support for RRTMG
	120	!
[1552]	121	! 1551 2015-03-03 14:18:16Z maronga
[1551]	122	! Added suppport for land surface model and radiation model output. In the course
	123	! of this action, the limits for vertical loops have been changed (from nzb and
	124	! nzt+1 to nzb_do and nzt_do, respectively in order to allow soil model output).
	125	! Moreover, a new vertical grid zs was introduced.
[1329]	126	!
[1360]	127	! 1359 2014-04-11 17:15:14Z hoffmann
	128	! New particle structure integrated.
	129	!
[1354]	130	! 1353 2014-04-08 15:21:23Z heinze
	131	! REAL constants provided with KIND-attribute
	132	!
[1329]	133	! 1327 2014-03-21 11:00:16Z raasch
	134	! parts concerning avs output removed,
	135	! -netcdf output queries
	136	!
[1321]	137	! 1320 2014-03-20 08:40:49Z raasch
[1320]	138	! ONLY-attribute added to USE-statements,
	139	! kind-parameters added to all INTEGER and REAL declaration statements,
	140	! kinds are defined in new module kinds,
	141	! old module precision_kind is removed,
	142	! revision history before 2012 removed,
	143	! comment fields (!:) to be used for variable explanations added to
	144	! all variable declaration statements
[674]	145	!
[1319]	146	! 1318 2014-03-17 13:35:16Z raasch
	147	! barrier argument removed from cpu_log,
	148	! module interfaces removed
	149	!
[1309]	150	! 1308 2014-03-13 14:58:42Z fricke
	151	! Check, if the limit of the time dimension is exceeded for parallel output
	152	! To increase the performance for parallel output, the following is done:
	153	! - Update of time axis is only done by PE0
	154	!
[1245]	155	! 1244 2013-10-31 08:16:56Z raasch
	156	! Bugfix for index bounds in case of 3d-parallel output
	157	!
[1116]	158	! 1115 2013-03-26 18:16:16Z hoffmann
	159	! ql is calculated by calc_liquid_water_content
	160	!
[1107]	161	! 1106 2013-03-04 05:31:38Z raasch
	162	! array_kind renamed precision_kind
	163	!
[1077]	164	! 1076 2012-12-05 08:30:18Z hoffmann
	165	! Bugfix in output of ql
	166	!
[1054]	167	! 1053 2012-11-13 17:11:03Z hoffmann
	168	! +nr, qr, prr, qc and averaged quantities
	169	!
[1037]	170	! 1036 2012-10-22 13:43:42Z raasch
	171	! code put under GPL (PALM 3.9)
	172	!
[1035]	173	! 1031 2012-10-19 14:35:30Z raasch
	174	! netCDF4 without parallel file support implemented
	175	!
[1008]	176	! 1007 2012-09-19 14:30:36Z franke
	177	! Bugfix: missing calculation of ql_vp added
	178	!
[1]	179	! Revision 1.1 1997/09/03 06:29:36 raasch
	180	! Initial revision
	181	!
	182	!
	183	! Description:
	184	! ------------
[1682]	185	!> Output of the 3D-arrays in netCDF and/or AVS format.
[1]	186	!------------------------------------------------------------------------------!
[1682]	187	SUBROUTINE data_output_3d( av )
	188
[1]	189
[1320]	190	USE arrays_3d, &
[2292]	191	ONLY: e, nc, nr, p, pt, prr, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, &
	192	sa, tend, u, v, vpt, w
[1320]	193
[1]	194	USE averaging
[1320]	195
[2696]	196	USE chemistry_model_mod, &
	197	ONLY: chem_data_output_3d
	198
[1320]	199	USE cloud_parameters, &
[1849]	200	ONLY: l_d_cp, pt_d_t
[1320]	201
	202	USE control_parameters, &
[2696]	203	ONLY: air_chemistry, cloud_physics, do3d, do3d_no, do3d_time_count, &
	204	io_blocks, io_group, land_surface, message_string, &
[2746]	205	ntdim_3d, nz_do3d, plant_canopy, &
[2232]	206	psolver, simulated_time, time_since_reference_point, &
	207	urban_surface, varnamelength
[1320]	208
	209	USE cpulog, &
	210	ONLY: log_point, cpu_log
[2817]	211
	212	USE gust_mod, &
	213	ONLY: gust_data_output_3d, gust_module_enabled
[1320]	214
	215	USE indices, &
[2696]	216	ONLY: nbgp, nx, nxl, nxr, ny, nyn, nys, nzb, wall_flags_0
[1320]	217
	218	USE kinds
	219
[1551]	220	USE land_surface_model_mod, &
[2232]	221	ONLY: lsm_data_output_3d, nzb_soil, nzt_soil
[1551]	222
[1783]	223	#if defined( __netcdf )
	224	USE NETCDF
	225	#endif
	226
	227	USE netcdf_interface, &
[2696]	228	ONLY: fill_value, id_set_3d, id_var_do3d, id_var_time_3d, nc_stat, &
[1783]	229	netcdf_data_format, netcdf_handle_error
[1320]	230
	231	USE particle_attributes, &
[1359]	232	ONLY: grid_particles, number_of_particles, particles, &
	233	particle_advection_start, prt_count
[1320]	234
[1]	235	USE pegrid
	236
[2209]	237	USE plant_canopy_model_mod, &
[2746]	238	ONLY: pcm_data_output_3d
[2209]	239
[1585]	240	USE radiation_model_mod, &
[2696]	241	ONLY: nzub, nzut, radiation, radiation_data_output_3d
[1585]	242
[2696]	243	USE turbulence_closure_mod, &
	244	ONLY: tcm_data_output_3d
	245
[2007]	246	USE urban_surface_mod, &
[2696]	247	ONLY: usm_data_output_3d
[1585]	248
[2007]	249
[1]	250	IMPLICIT NONE
	251
[1682]	252	INTEGER(iwp) :: av !<
[2696]	253	INTEGER(iwp) :: flag_nr !< number of masking flag
[1682]	254	INTEGER(iwp) :: i !<
	255	INTEGER(iwp) :: if !<
	256	INTEGER(iwp) :: j !<
	257	INTEGER(iwp) :: k !<
	258	INTEGER(iwp) :: n !<
	259	INTEGER(iwp) :: nzb_do !< vertical lower limit for data output
	260	INTEGER(iwp) :: nzt_do !< vertical upper limit for data output
[1]	261
[1682]	262	LOGICAL :: found !<
	263	LOGICAL :: resorted !<
[1]	264
[1682]	265	REAL(wp) :: mean_r !<
	266	REAL(wp) :: s_r2 !<
	267	REAL(wp) :: s_r3 !<
[1]	268
[1682]	269	REAL(sp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !<
[1]	270
[1682]	271	REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !<
[1]	272
[2011]	273	CHARACTER (LEN=varnamelength) :: trimvar !< TRIM of output-variable string
[2007]	274
[1]	275	!
	276	!-- Return, if nothing to output
	277	IF ( do3d_no(av) == 0 ) RETURN
	278
	279	CALL cpu_log (log_point(14),'data_output_3d','start')
	280
	281	!
	282	!-- Open output file.
[2512]	283	!-- For classic or 64bit netCDF output on more than one PE, each PE opens its
	284	!-- own file and writes the data of its subdomain in binary format. After the
	285	!-- run, these files are combined to one NetCDF file by combine_plot_fields.
[1031]	286	!-- For netCDF4/HDF5 output, data is written in parallel into one file.
[1327]	287	IF ( netcdf_data_format < 5 ) THEN
[2967]	288	#if defined( __parallel )
[1327]	289	CALL check_open( 30 )
[2967]	290	#endif
[1327]	291	IF ( myid == 0 ) CALL check_open( 106+av*10 )
[493]	292	ELSE
[1327]	293	CALL check_open( 106+av*10 )
[493]	294	ENDIF
[1]	295
	296	!
[1745]	297	!-- For parallel netcdf output the time axis must be limited. Return, if this
	298	!-- limit is exceeded. This could be the case, if the simulated time exceeds
	299	!-- the given end time by the length of the given output interval.
	300	IF ( netcdf_data_format > 4 ) THEN
	301	IF ( do3d_time_count(av) + 1 > ntdim_3d(av) ) THEN
	302	WRITE ( message_string, * ) 'Output of 3d data is not given at t=', &
	303	simulated_time, '&because the maximum ', &
	304	'number of output time levels is ', &
	305	'exceeded.'
	306	CALL message( 'data_output_3d', 'PA0387', 0, 1, 0, 6, 0 )
	307	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
	308	RETURN
	309	ENDIF
	310	ENDIF
	311
	312	!
[1031]	313	!-- Update the netCDF time axis
[1308]	314	!-- In case of parallel output, this is only done by PE0 to increase the
	315	!-- performance.
[1]	316	#if defined( __netcdf )
[1308]	317	do3d_time_count(av) = do3d_time_count(av) + 1
	318	IF ( myid == 0 ) THEN
[1327]	319	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_time_3d(av), &
	320	(/ time_since_reference_point /), &
	321	start = (/ do3d_time_count(av) /), &
	322	count = (/ 1 /) )
[1783]	323	CALL netcdf_handle_error( 'data_output_3d', 376 )
[1]	324	ENDIF
	325	#endif
	326
	327	!
	328	!-- Loop over all variables to be written.
	329	if = 1
	330
	331	DO WHILE ( do3d(av,if)(1:1) /= ' ' )
[2007]	332
[1]	333	!
[2007]	334	!-- Temporary solution to account for data output within the new urban
	335	!-- surface model (urban_surface_mod.f90), see also SELECT CASE ( trimvar ).
[1]	336	!-- Store the array chosen on the temporary array.
[2007]	337	trimvar = TRIM( do3d(av,if) )
[2011]	338	IF ( urban_surface .AND. trimvar(1:4) == 'usm_' ) THEN
[2007]	339	trimvar = 'usm_output'
	340	resorted = .TRUE.
	341	nzb_do = nzub
	342	nzt_do = nzut
	343	ELSE
	344	resorted = .FALSE.
	345	nzb_do = nzb
	346	nzt_do = nz_do3d
	347	ENDIF
[1551]	348	!
[1980]	349	!-- Set flag to steer output of radiation, land-surface, or user-defined
	350	!-- quantities
	351	found = .FALSE.
	352	!
[1551]	353	!-- Allocate a temporary array with the desired output dimensions.
[2512]	354	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	355	!
	356	!-- Before each output, set array local_pf to fill value
	357	local_pf = fill_value
	358	!
	359	!-- Set masking flag for topography for not resorted arrays
	360	flag_nr = 0
[1551]	361
[2007]	362	SELECT CASE ( trimvar )
[1]	363
	364	CASE ( 'e' )
	365	IF ( av == 0 ) THEN
	366	to_be_resorted => e
	367	ELSE
	368	to_be_resorted => e_av
	369	ENDIF
	370
[771]	371	CASE ( 'lpt' )
	372	IF ( av == 0 ) THEN
	373	to_be_resorted => pt
	374	ELSE
	375	to_be_resorted => lpt_av
	376	ENDIF
	377
[2292]	378	CASE ( 'nc' )
	379	IF ( av == 0 ) THEN
	380	to_be_resorted => nc
	381	ELSE
	382	to_be_resorted => nc_av
	383	ENDIF
	384
[1053]	385	CASE ( 'nr' )
	386	IF ( av == 0 ) THEN
	387	to_be_resorted => nr
	388	ELSE
	389	to_be_resorted => nr_av
	390	ENDIF
	391
[1]	392	CASE ( 'p' )
	393	IF ( av == 0 ) THEN
[727]	394	IF ( psolver /= 'sor' ) CALL exchange_horiz( p, nbgp )
[1]	395	to_be_resorted => p
	396	ELSE
[727]	397	IF ( psolver /= 'sor' ) CALL exchange_horiz( p_av, nbgp )
[1]	398	to_be_resorted => p_av
	399	ENDIF
	400
	401	CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange)
	402	IF ( av == 0 ) THEN
[1359]	403	IF ( simulated_time >= particle_advection_start ) THEN
	404	tend = prt_count
	405	ELSE
	406	tend = 0.0_wp
	407	ENDIF
[2512]	408	DO i = nxl, nxr
	409	DO j = nys, nyn
[1551]	410	DO k = nzb_do, nzt_do
[1]	411	local_pf(i,j,k) = tend(k,j,i)
	412	ENDDO
	413	ENDDO
	414	ENDDO
	415	resorted = .TRUE.
	416	ELSE
	417	to_be_resorted => pc_av
	418	ENDIF
	419
[1359]	420	CASE ( 'pr' ) ! mean particle radius (effective radius)
[1]	421	IF ( av == 0 ) THEN
[1359]	422	IF ( simulated_time >= particle_advection_start ) THEN
	423	DO i = nxl, nxr
	424	DO j = nys, nyn
[1551]	425	DO k = nzb_do, nzt_do
[1359]	426	number_of_particles = prt_count(k,j,i)
	427	IF (number_of_particles <= 0) CYCLE
	428	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	429	s_r2 = 0.0_wp
	430	s_r3 = 0.0_wp
	431	DO n = 1, number_of_particles
	432	IF ( particles(n)%particle_mask ) THEN
	433	s_r2 = s_r2 + particles(n)%radius*2 &
	434	particles(n)%weight_factor
	435	s_r3 = s_r3 + particles(n)%radius*3 &
	436	particles(n)%weight_factor
	437	ENDIF
	438	ENDDO
	439	IF ( s_r2 > 0.0_wp ) THEN
	440	mean_r = s_r3 / s_r2
	441	ELSE
	442	mean_r = 0.0_wp
	443	ENDIF
	444	tend(k,j,i) = mean_r
[1]	445	ENDDO
	446	ENDDO
	447	ENDDO
[1359]	448	ELSE
	449	tend = 0.0_wp
	450	ENDIF
[2512]	451	DO i = nxl, nxr
	452	DO j = nys, nyn
[1551]	453	DO k = nzb_do, nzt_do
[1]	454	local_pf(i,j,k) = tend(k,j,i)
	455	ENDDO
	456	ENDDO
	457	ENDDO
	458	resorted = .TRUE.
	459	ELSE
	460	to_be_resorted => pr_av
	461	ENDIF
	462
[1053]	463	CASE ( 'prr' )
	464	IF ( av == 0 ) THEN
[2512]	465	DO i = nxl, nxr
	466	DO j = nys, nyn
[1822]	467	DO k = nzb_do, nzt_do
[1053]	468	local_pf(i,j,k) = prr(k,j,i)
	469	ENDDO
	470	ENDDO
	471	ENDDO
	472	ELSE
[2512]	473	DO i = nxl, nxr
	474	DO j = nys, nyn
[1822]	475	DO k = nzb_do, nzt_do
[1053]	476	local_pf(i,j,k) = prr_av(k,j,i)
	477	ENDDO
	478	ENDDO
	479	ENDDO
	480	ENDIF
	481	resorted = .TRUE.
	482
[1]	483	CASE ( 'pt' )
	484	IF ( av == 0 ) THEN
	485	IF ( .NOT. cloud_physics ) THEN
	486	to_be_resorted => pt
	487	ELSE
[2512]	488	DO i = nxl, nxr
	489	DO j = nys, nyn
[1551]	490	DO k = nzb_do, nzt_do
[1320]	491	local_pf(i,j,k) = pt(k,j,i) + l_d_cp * &
	492	pt_d_t(k) * &
[1]	493	ql(k,j,i)
	494	ENDDO
	495	ENDDO
	496	ENDDO
	497	resorted = .TRUE.
	498	ENDIF
	499	ELSE
	500	to_be_resorted => pt_av
	501	ENDIF
	502
	503	CASE ( 'q' )
	504	IF ( av == 0 ) THEN
	505	to_be_resorted => q
	506	ELSE
	507	to_be_resorted => q_av
	508	ENDIF
[691]	509
[1053]	510	CASE ( 'qc' )
[1]	511	IF ( av == 0 ) THEN
[1115]	512	to_be_resorted => qc
[1]	513	ELSE
[1115]	514	to_be_resorted => qc_av
[1]	515	ENDIF
	516
[1053]	517	CASE ( 'ql' )
	518	IF ( av == 0 ) THEN
[1115]	519	to_be_resorted => ql
[1053]	520	ELSE
[1115]	521	to_be_resorted => ql_av
[1053]	522	ENDIF
	523
[1]	524	CASE ( 'ql_c' )
	525	IF ( av == 0 ) THEN
	526	to_be_resorted => ql_c
	527	ELSE
	528	to_be_resorted => ql_c_av
	529	ENDIF
	530
	531	CASE ( 'ql_v' )
	532	IF ( av == 0 ) THEN
	533	to_be_resorted => ql_v
	534	ELSE
	535	to_be_resorted => ql_v_av
	536	ENDIF
	537
	538	CASE ( 'ql_vp' )
	539	IF ( av == 0 ) THEN
[1359]	540	IF ( simulated_time >= particle_advection_start ) THEN
	541	DO i = nxl, nxr
	542	DO j = nys, nyn
[1551]	543	DO k = nzb_do, nzt_do
[1359]	544	number_of_particles = prt_count(k,j,i)
	545	IF (number_of_particles <= 0) CYCLE
	546	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	547	DO n = 1, number_of_particles
	548	IF ( particles(n)%particle_mask ) THEN
	549	tend(k,j,i) = tend(k,j,i) + &
	550	particles(n)%weight_factor / &
	551	prt_count(k,j,i)
	552	ENDIF
	553	ENDDO
[1007]	554	ENDDO
	555	ENDDO
	556	ENDDO
[1359]	557	ELSE
	558	tend = 0.0_wp
	559	ENDIF
[2512]	560	DO i = nxl, nxr
	561	DO j = nys, nyn
[1551]	562	DO k = nzb_do, nzt_do
[1007]	563	local_pf(i,j,k) = tend(k,j,i)
	564	ENDDO
	565	ENDDO
	566	ENDDO
	567	resorted = .TRUE.
[1]	568	ELSE
	569	to_be_resorted => ql_vp_av
	570	ENDIF
	571
[1053]	572	CASE ( 'qr' )
	573	IF ( av == 0 ) THEN
	574	to_be_resorted => qr
	575	ELSE
	576	to_be_resorted => qr_av
	577	ENDIF
	578
[1]	579	CASE ( 'qv' )
	580	IF ( av == 0 ) THEN
[2512]	581	DO i = nxl, nxr
	582	DO j = nys, nyn
[1551]	583	DO k = nzb_do, nzt_do
[1]	584	local_pf(i,j,k) = q(k,j,i) - ql(k,j,i)
	585	ENDDO
	586	ENDDO
	587	ENDDO
	588	resorted = .TRUE.
	589	ELSE
	590	to_be_resorted => qv_av
	591	ENDIF
	592
[2031]	593	CASE ( 'rho_ocean' )
[96]	594	IF ( av == 0 ) THEN
[2031]	595	to_be_resorted => rho_ocean
[96]	596	ELSE
[2031]	597	to_be_resorted => rho_ocean_av
[96]	598	ENDIF
[691]	599
[1]	600	CASE ( 's' )
	601	IF ( av == 0 ) THEN
[1960]	602	to_be_resorted => s
[1]	603	ELSE
[355]	604	to_be_resorted => s_av
[1]	605	ENDIF
[691]	606
[96]	607	CASE ( 'sa' )
	608	IF ( av == 0 ) THEN
	609	to_be_resorted => sa
	610	ELSE
	611	to_be_resorted => sa_av
	612	ENDIF
[691]	613
[1]	614	CASE ( 'u' )
[2696]	615	flag_nr = 1
[1]	616	IF ( av == 0 ) THEN
	617	to_be_resorted => u
	618	ELSE
	619	to_be_resorted => u_av
	620	ENDIF
	621
	622	CASE ( 'v' )
[2696]	623	flag_nr = 2
[1]	624	IF ( av == 0 ) THEN
	625	to_be_resorted => v
	626	ELSE
	627	to_be_resorted => v_av
	628	ENDIF
	629
	630	CASE ( 'vpt' )
	631	IF ( av == 0 ) THEN
	632	to_be_resorted => vpt
	633	ELSE
	634	to_be_resorted => vpt_av
	635	ENDIF
	636
	637	CASE ( 'w' )
[2696]	638	flag_nr = 3
[1]	639	IF ( av == 0 ) THEN
	640	to_be_resorted => w
	641	ELSE
	642	to_be_resorted => w_av
	643	ENDIF
[2007]	644	!
	645	!-- Block of urban surface model outputs
	646	CASE ( 'usm_output' )
	647	CALL usm_data_output_3d( av, do3d(av,if), found, local_pf, &
	648	nzb_do, nzt_do )
[1]	649
	650	CASE DEFAULT
[1972]	651
[1]	652	!
[1972]	653	!-- Land surface quantity
	654	IF ( land_surface ) THEN
	655	!
	656	!-- For soil model quantities, it is required to re-allocate local_pf
	657	nzb_do = nzb_soil
	658	nzt_do = nzt_soil
	659
	660	DEALLOCATE ( local_pf )
[2512]	661	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[2696]	662	local_pf = fill_value
[1972]	663
	664	CALL lsm_data_output_3d( av, do3d(av,if), found, local_pf )
	665	resorted = .TRUE.
[1976]	666
	667	!
	668	!-- If no soil model variable was found, re-allocate local_pf
	669	IF ( .NOT. found ) THEN
	670	nzb_do = nzb
	671	nzt_do = nz_do3d
	672
	673	DEALLOCATE ( local_pf )
[2512]	674	ALLOCATE( local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do) )
[1976]	675	ENDIF
	676
[1972]	677	ENDIF
	678
[2696]	679	IF ( .NOT. found ) THEN
	680	CALL tcm_data_output_3d( av, do3d(av,if), found, local_pf )
	681	resorted = .TRUE.
	682	ENDIF
	683
[1972]	684	!
[1976]	685	!-- Radiation quantity
	686	IF ( .NOT. found .AND. radiation ) THEN
	687	CALL radiation_data_output_3d( av, do3d(av,if), found, &
	688	local_pf )
	689	resorted = .TRUE.
	690	ENDIF
	691
	692	!
[2817]	693	!-- Gust module quantities
	694	IF ( .NOT. found .AND. gust_module_enabled ) THEN
	695	CALL gust_data_output_3d( av, do3d(av,if), found, local_pf, &
	696	nzb_do, nzt_do )
	697	resorted = .TRUE.
	698	ENDIF
	699
	700	!
[2696]	701	!-- Chemistry model output
	702	IF ( .NOT. found .AND. air_chemistry ) THEN
	703	CALL chem_data_output_3d( av, do3d(av,if), found, &
[2756]	704	local_pf, fill_value )
[2696]	705	resorted = .TRUE.
	706	ENDIF
	707
	708	!
[2209]	709	!-- Plant canopy model output
	710	IF ( .NOT. found .AND. plant_canopy ) THEN
[2696]	711	CALL pcm_data_output_3d( av, do3d(av,if), found, local_pf, &
	712	fill_value )
[2209]	713	resorted = .TRUE.
	714	ENDIF
	715
	716	!
[1]	717	!-- User defined quantity
[1972]	718	IF ( .NOT. found ) THEN
	719	CALL user_data_output_3d( av, do3d(av,if), found, local_pf, &
	720	nzb_do, nzt_do )
	721	resorted = .TRUE.
	722	ENDIF
[1]	723
[254]	724	IF ( .NOT. found ) THEN
[1320]	725	message_string = 'no output available for: ' // &
[274]	726	TRIM( do3d(av,if) )
[254]	727	CALL message( 'data_output_3d', 'PA0182', 0, 0, 0, 6, 0 )
[1]	728	ENDIF
	729
	730	END SELECT
	731
	732	!
	733	!-- Resort the array to be output, if not done above
	734	IF ( .NOT. resorted ) THEN
[2512]	735	DO i = nxl, nxr
	736	DO j = nys, nyn
[1551]	737	DO k = nzb_do, nzt_do
[2696]	738	local_pf(i,j,k) = MERGE( &
	739	to_be_resorted(k,j,i), &
	740	REAL( fill_value, KIND = wp ), &
	741	BTEST( wall_flags_0(k,j,i), flag_nr ) )
[1]	742	ENDDO
	743	ENDDO
	744	ENDDO
	745	ENDIF
	746
	747	!
[1327]	748	!-- Output of the 3D-array
	749	#if defined( __parallel )
	750	IF ( netcdf_data_format < 5 ) THEN
[1]	751	!
[1327]	752	!-- Non-parallel netCDF output. Data is output in parallel in
	753	!-- FORTRAN binary format here, and later collected into one file by
	754	!-- combine_plot_fields
	755	IF ( myid == 0 ) THEN
	756	WRITE ( 30 ) time_since_reference_point, &
	757	do3d_time_count(av), av
[1]	758	ENDIF
[1327]	759	DO i = 0, io_blocks-1
	760	IF ( i == io_group ) THEN
[2512]	761	WRITE ( 30 ) nxl, nxr, nys, nyn, nzb_do, nzt_do
[1551]	762	WRITE ( 30 ) local_pf(:,:,nzb_do:nzt_do)
[1327]	763	ENDIF
[1972]	764
[1327]	765	CALL MPI_BARRIER( comm2d, ierr )
[1972]	766
[1327]	767	ENDDO
[559]	768
[1327]	769	ELSE
[646]	770	#if defined( __netcdf )
[493]	771	!
[1327]	772	!-- Parallel output in netCDF4/HDF5 format.
[2512]	773	! IF ( nxr == nx .AND. nyn /= ny ) THEN
	774	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	775	! local_pf(nxl:nxr+1,nys:nyn,nzb_do:nzt_do), &
	776	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	777	! count = (/ nxr-nxl+2, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
	778	! ELSEIF ( nxr /= nx .AND. nyn == ny ) THEN
	779	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	780	! local_pf(nxl:nxr,nys:nyn+1,nzb_do:nzt_do), &
	781	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	782	! count = (/ nxr-nxl+1, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	783	! ELSEIF ( nxr == nx .AND. nyn == ny ) THEN
	784	! nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
	785	! local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do ), &
	786	! start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	787	! count = (/ nxr-nxl+2, nyn-nys+2, nzt_do-nzb_do+1, 1 /) )
	788	! ELSE
[1327]	789	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	790	local_pf(nxl:nxr,nys:nyn,nzb_do:nzt_do), &
	791	start = (/ nxl+1, nys+1, nzb_do+1, do3d_time_count(av) /), &
	792	count = (/ nxr-nxl+1, nyn-nys+1, nzt_do-nzb_do+1, 1 /) )
[2512]	793	! ENDIF
[1783]	794	CALL netcdf_handle_error( 'data_output_3d', 386 )
[646]	795	#endif
[1327]	796	ENDIF
[1]	797	#else
	798	#if defined( __netcdf )
[1327]	799	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_do3d(av,if), &
[1551]	800	local_pf(nxl:nxr+1,nys:nyn+1,nzb_do:nzt_do), &
[1327]	801	start = (/ 1, 1, 1, do3d_time_count(av) /), &
[2512]	802	count = (/ nx+1, ny+1, nzt_do-nzb_do+1, 1 /) )
[1783]	803	CALL netcdf_handle_error( 'data_output_3d', 446 )
[1]	804	#endif
	805	#endif
	806
	807	if = if + 1
	808
	809	!
[1551]	810	!-- Deallocate temporary array
	811	DEALLOCATE ( local_pf )
[1]	812
[1551]	813	ENDDO
[1]	814
[1318]	815	CALL cpu_log( log_point(14), 'data_output_3d', 'stop' )
[1]	816
	817	!
	818	!-- Formats.
[1320]	819	3300 FORMAT ('variable ',I4,' file=',A,' filetype=unformatted skip=',I12/ &
[1]	820	'label = ',A,A)
	821
	822	END SUBROUTINE data_output_3d

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