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source: palm/trunk/SCRIPTS/subjob @ 125

Last change on this file since 125 was 125, checked in by raasch, 17 years ago
small bugfix in subjob
Property svn:keywords set to `Rev`
File size: 36.9 KB

Rev	Line
[1]	1	#!/bin/ksh
[82]	2	# subjob - Plot-Shellskript Version: @(#)SUBJOB 1.0
[66]	3	# $Id: subjob 54 2007-03-08 00:00:02Z raasch $
[1]	4
	5	# Prozedur zum automatischen Generieren von Batch-Jobs, die unter NQS
	6	# laufen sollen und deren Ergebnis (Dayfile) zum Job-generierenden
	7	# Host zurueckgeschickt werden sollen
	8
	9
	10	# letzte Aenderung:
	11	# 29/06/94 - Siggi - Beginn mit Erstellung der Originalversion
	12	# 08/07/94 - Siggi - Originalversion abgeschlossen (Version 1.0)
	13	# 06/02/98 - Siggi - berte validiert
	14	# 27/01/01 - Siggi - ground.yonsei.ac.kr validiert, Jobs zur T3E in Korea
	15	# moeglich
	16	# 08/02/01 - Siggi - alle subjob-Meldungen ins englische uebersetzt
	17	# 25/05/02 - Siggi - Unterstuetzung des LoadLeveler
	18	# 30/05/02 - Siggi - Validierung fuer ibm-Rechner in Seoul (nobel) sowie
	19	# allgemeine Anpassungen fuer ibm-Rechner
	20	# 15/10/02 - Siggi - Neue Default-Jobklasse (p_normal) fuer IBM in Seoul
	21	# Ruecktransfer des Jobprotokolls fuer diese
	22	# Maschine abgeschaltet
	23	# 31/10/02 - Siggi - berni validiert
	24	# 06/11/02 - Siggi - Neue Jobklassen auf ibmb und ibmh
	25	# 08/11/02 - Siggi - quanero validiert
	26	# 11/12/02 - Siggi - Notification fuer Transfer-Jobs abgeschaltet
	27	# 23/01/03 - Siggi - hostname nobel changed to nobela
	28	# 06/02/03 - Siggi - gregale validated
	29	# 12/02/03 - Siggi - orkan and maestro validated
	30	# 21/02/03 - Siggi - all nobel nodes in Seoul validated
	31	# 12/03/03 - Siggi - nec at DKRZ validated
	32	# 13/03/03 - Siggi - new nqs resource variable Memory
	33	# 07/04/03 - Siggi - processor request option -c on nech needs tasks per
	34	# node
	35	# 11/04/03 - Siggi - network on ibms has attribute "shared"
	36	# 31/07/03 - Siggi - nqs2 on nech implemented (provisional: -h nech2)
	37	# cxxl added to ibmh
	38	# 29/08/03 - Siggi - changes in job queues and communication system on
	39	# ibms
	40	# 24/10/03 - Siggi - using alternate hanni address 130.75.4.2
	41	# 30/10/03 - Siggi - nech is not supported any more
	42	# 10/11/03 - Siggi - nech2 renamed to nech
	43	# 20/11/03 - Siggi - submit command on nech changed from qsub.test to qsub
	44	# 29/03/04 - Siggi - ground not supported any more, gfdl3 validated
	45	# 31/03/04 - Siggi - new option -N for node usage
	46	# 12/04/04 - Siggi - scp2 instead of scp used for transfer from decalpha
	47	# due to error in ssh installation (otherwise a prompt
	48	# for the password appears)
	49	# 23/07/04 - Siggi - changes due to the new berni configuration
	50	# (federation switch)
	51	# 01/09/04 - Gerald new job-classes on hanni
	52	# 08/09/04 - Siggi - hanni IP address changed to 130.75.4.10
	53	# 23/11/04 - Siggi - new job class cdata on hanni and berni
	54	# 03/12/04 - Siggi - notification on ibm switched of in case of
	55	# delete_dayfile = true, node usage in cdev set to
	56	# shared
	57	# 16/02/05 - Gerald hababai validated
	58	# 29/03/05 - Micha - new job class channi on hanni
	59	# 11/05/05 - Siggi - ConsumableMemory is now required as resource keyword
	60	# on ibms
	61	# 24/05/05 - Siggi - Default queue on ibms changed from p_normal_1.3 to
	62	# p_normal
	63	# 30/06/05 - Siggi - network changed for queue cdev from "us" to "ip"
	64	# 12/07/05 - Siggi - in network.mpi on ibmh/ibmb "csss" changed to
	65	# "sn_all", new job class cexp
	66	# 08/09/05 - Siggi - IP-address of gfdl3 changed
	67	# 31/10/05 - Siggi - new job class pp on hurricane, serial jobs on
	68	# hurricane (with -X0)
	69	# 01/11/05 - Siggi - missing queue for jobs submitted on nech (for nech)
	70	# added
	71	# 30/12/05 - Siggi - change of IP adresses in subnet 130.75.105
	72	# 09/02/06 - Siggi - ibmy admitted
	73	# 10/02/06 - Siggi - scp2 changed to /bin/scp on decalpha
	74	# 13/04/06 - Siggi - ostria admitted
	75	# 18/04/06 - Siggi - new option -O for OpenMP usage
	76	# 24/05/06 - Siggi - lctit admitted, ftpjob renamed scpjob
	77	# 25/07/06 - Siggi - gfdl5 (ibmy) admitted for submitting jobs
	78	# 27/09/06 - Siggi - breg/hreg extended with berni/hanni
	79	# 25/10/06 - Siggi - data_limit set to 1.76 GByte on hanni and berni
	80	# 28/11/06 - Siggi - levanto admitted
[5]	81	# 13/02/07 - Siggi - hpmuk releated code removed
[35]	82	# 01/03/07 - Siggi - adjustments for RIAM machines gate and NEC-SX8 (n-sx)
[82]	83	# 12/04/07 - Siggi - option -f (filetransfer protocol) removed, scp only
[102]	84	# 27/07/07 - Siggi - autan admitted
[108]	85	# 03/08/07 - Marcus- lcfimm admitted
[113]	86	# 08/10/07 - Siggi - further job classes added for hanni (csoloh...)
[118]	87	# 15/10/07 - Siggi - preliminary adjustments for lctit based on Jin's
	88	# suggestions
[122]	89	# 19/10/07 - Marcus- add new optional argument -g group_number
[125]	90	# 19/10/07 - Siggi - a ";" was missing in the last change done by Marcus
[1]	91
	92
	93	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	94	delete_dayfile=false
[122]	95	group_number=none
[1]	96	locat=normal
	97	no_default_queue=none
	98	no_submit=false
	99	job_catalog="~/job_queue"
	100	job_name=none
	101	local_user=$LOGNAME
	102	node_usage=shared
	103	numprocs=1
	104	punkte="..........................................................."
	105	submcom=qsub
	106	queue=default
	107	remote_host=none
	108	remote_user=""
	109	verify=true
	110
	111	typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden
	112	typeset -i inumprocs nodes=0 tasks_per_node=0 threads_per_task=1
	113	typeset -L20 spalte1
	114	typeset -R40 spalte2
	115	typeset -L60 spalte3
	116
	117
	118
	119	# FEHLERBEHANDLUNG
	120	# BEI EXIT:
	121	trap 'if [[ $locat != normal ]]
	122	then
	123	case $locat in
	124	(option) printf "\n --> available optios can be displayed"
	125	printf " by typing:"
	126	printf "\n \"subjob ?\" \n";;
	127	(ftpcopy\|parameter\|scp\|verify) printf "\n";;
	128	(*) printf "\n +++ unknown error"
	129	printf "\n please inform S. Raasch!\n"
	130	esac
	131	[[ -f $job_to_send ]] && rm $job_to_send
	132	printf "\n\n+++ SUBJOB killed \n\n"
	133	fi' exit
	134
	135
	136	# BEI TERMINAL-BREAK:
	137	trap '[[ -f $job_to_send ]] && rm $job_to_send
	138	printf "\n\n+++ SUBJOB killed \n\n"
	139	exit
	140	' 2
	141
	142
	143
	144
	145	# LOKALEN HOSTNAMEN FESTSTELLEN
	146	local_host=$(hostname)
	147
	148
	149
	150	# HOSTSPEZIFISCHE VARIABLEN VEREINBAREN BZW. PRUEFEN, OB LOKALER HOST
	151	# UEBERHAUPT ZULAESSIG IST
	152	case $local_host in
	153	(atmos) local_addres=172.20.25.35; local_host=lcide;;
[102]	154	(autan) local_addres=130.75.105.57; local_host=lcmuk;;
[5]	155	(bora) local_addres=130.75.105.103; local_host=lcmuk;;
[1]	156	(breg-en0\|berni-en0) local_addres=130.73.230.10; local_host=ibmb;;
[12]	157	(breva) local_addres=130.75.105.98; local_host=lcmuk;;
[108]	158	(compute-*.local) local_addres=172.20.4.2; local_host=lcfimm;;
[1]	159	(cs*) local_addres=136.172.44.131; local_host=nech;;
[5]	160	(elephanta) local_addres=130.75.105.6; local_host=lcmuk;;
[108]	161	(fimm.bccs.uib.no) local_addres=172.20.4.2; local_host=lcfimm;;
[101]	162	(gallego) local_addres=130.75.105.10; local_host=lcmuk;;
[35]	163	(gate\|n-sx) local_addres=133.5.178.11; local_host=neck;;
[1]	164	(gfdl5) local_addres=165.132.26.58; local_host=ibmy;;
	165	(gfdl3.yonsei.ac.kr) local_addres=165.132.26.56; local_host=decalpha;;
[5]	166	(gregale) local_addres=130.75.105.109; local_host=lcmuk;;
	167	(hababai) local_addres=130.75.105.108; local_host=lcmuk;;
[1]	168	(hreg-en0\|hanni-en0) local_addres=130.75.4.10; local_host=ibmh;;
[5]	169	(irifi) local_addres=130.75.105.104; local_host=lcmuk;;
	170	(levanto) local_addres=130.75.105.45; local_host=lcmuk;;
	171	(maestro) local_addres=130.75.105.2; local_host=lcmuk;;
[1]	172	(nobel*) local_addres=150.183.5.101; local_host=ibms;;
[5]	173	(orkan) local_addres=130.75.105.3; local_host=lcmuk;;
	174	(ostria) local_addres=130.75.105.106; local_host=lcmuk;;
	175	(quanero) local_addres=130.75.105.107; local_host=lcmuk;;
[1]	176	(scirocco) local_addres=172.20.25.41; local_host=lcmuk;;
	177	(sun1\|sun2) local_addres=130.75.6.1; local_host=unics;;
	178	(tgg*) local_addres=172.17.75.161; local_host=lctit;;
	179	(vorias) local_addres=172.20.25.43; local_host=lcmuk;;
	180	(*) printf "\n +++ \"$local_host\" unknown";
	181	printf "\n please inform S. Raasch!";
	182	locat=parameter; exit;;
	183	esac
	184
	185
	186
	187	# REMOTE HOST DEFAULTMAESSIG = LOCAL HOST SETZEN
	188	remote_host=$local_host
	189
	190
	191
	192
	193	# PROZEDUROPTIONEN EINLESEN
[122]	194	while getopts :c:dDg:h:m:n:N:O:q:t:T:u:vX: option
[1]	195	do
	196	case $option in
	197	(c) job_catalog=$OPTARG;;
	198	(d) delete_dayfile=true;;
	199	(D) no_submit=true;;
[125]	200	(g) group_number=$OPTARG;;
[1]	201	(h) remote_host=$OPTARG;;
	202	(m) memory=$OPTARG;;
	203	(n) job_name=$OPTARG;;
	204	(N) node_usage=$OPTARG;;
	205	(O) threads_per_task=$OPTARG;;
	206	(q) no_default_queue=$OPTARG;;
	207	(t) cputime=$OPTARG;;
	208	(T) tasks_per_node=$OPTARG;;
	209	(u) remote_user=$OPTARG;;
	210	(v) verify=false;;
	211	(X) numprocs=$OPTARG;;
	212	(\?) printf "\n +++ Option $OPTARG unknown \n";
	213	locat=option; exit;;
	214	esac
	215	done
	216
	217
	218	# JOBDATEINAMEN ALS NAECHSTES ARGUMENT HOLEN
	219	shift OPTIND-1; file_to_send=$1
	220
	221
	222	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	223	if [ "$1" = "?" ]
	224	then
	225	(printf "\n *** subjob can be called as follows:\n"
	226	printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n"
	227	printf "\n Description of available options:\n"
	228	printf "\n Option Description Default-Value"
	229	printf "\n -c job-input- and output-catalog ~/job_queue"
	230	printf "\n -d no job-protocol will be created ---"
	231	printf "\n -D only the job-file will be created ---"
	232	printf "\n -h execution host, available hosts: $remote_host"
[5]	233	printf "\n ibm, ibmb, ibmh, ibms, ibmy, lcmuk,"
[35]	234	printf "\n lctit, nech, neck, unics"
[1]	235	printf "\n -m memory demand per process in MByte ---"
	236	printf "\n -n jobname <jobdatei>"
	237	printf "\n -O threads per task (for OpenMP usage) 1"
	238	printf "\n -q job-queue to be used default"
	239	printf "\n -t allowed cpu-time in seconds ---"
	240	printf "\n -T tasks per node (on parallel hosts) ---"
	241	printf "\n -u username on execution host from .netrc"
	242	printf "\n -v no prompt for confirmation ---"
	243	printf "\n -X # of processors (on parallel hosts) 1"
	244	printf "\n "
	245	printf "\n The only possible positional parameter is <jobfile>:"
	246	printf "\n The complete NQS-job must be provided here."
	247	printf "\n <jobfile>=? creates this outline\n\n") \| more
	248	exit
	249	fi
	250
	251
	252
	253	# PRUEFEN, OB JOBDATEI ANGEGEBEN WURDE UND OB SIE AUCH EXISTIERT
	254	if [[ "$file_to_send" = "" ]]
	255	then
	256	printf "\n +++ job-file missing"
	257	locat=parameter; exit
	258	else
	259	if [[ -f $file_to_send ]]
	260	then
	261	true
	262	else
	263	printf "\n +++ job-file: "
	264	printf "\n $file_to_send"
	265	printf "\n does not exist"
	266	locat=parameter; exit
	267	fi
	268	fi
	269
	270
	271
	272	# FALLS KEIN JOBNAME ANGEGEBEN WURDE, WIRD JOBNAME = JOBDATEINAME
	273	# GESETZT. VORAUSSETZUNG: JOBDATEINAME BEINHALTET KEINE PFADE
	274	if [[ $job_name = none ]]
	275	then
	276	job_name=$file_to_send
	277	fi
	278	if [[ $(echo $job_name \| grep -c "/") != 0 ]]
	279	then
	280	printf "\n +++ job-file name: "
	281	printf "\n $job_name"
	282	printf "\n must not contain \"/\"-characters"
	283	locat=parameter; exit
	284	fi
	285
	286
	287
	288
	289	# HOSTSPEZIFISCHE GROESSEN VEREINBAREN BZW. ABBRUCH BEI UNZULAESSIGEM HOST
	290	# ODER WENN HOST NICHT ANGEGEBEN WURDE
	291	if [[ $remote_host = none ]]
	292	then
	293	printf "\n +++ host missing"
	294	locat=option; exit
	295	else
	296	case $remote_host in
	297	(ibm) queue=p690_standard; remote_addres=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	298	(ibmb) queue=cpar; remote_addres=130.73.230.10; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	299	(ibmh) queue=cpar; remote_addres=130.75.4.10; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	300	(ibms) queue=p_normal; remote_addres=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
	301	(ibmy) queue=parallel; remote_addres=165.132.26.58; submcom=/usr/lpp/LoadL/full/bin/llsubmit;;
[108]	302	(lcfimm) remote_addres=172.20.4.2; submcom=/opt/torque/bin/qsub;;
[118]	303	(lctit) queue=lctit; remote_addres=172.17.75.161; submcom=/n1ge/TITECH_GRID/tools/bin/n1ge;;
[1]	304	(nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=136.172.44.147; submcom="/usr/local/bin/qsub";;
[35]	305	(neck) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=133.5.178.11; submcom="/usr/bin/nqsII/qsub";;
[1]	306	(vpp) qsubmem=m; qsubtime=t; queue=vpp; remote_addres=130.75.4.130;;
	307	(unics) qsubmem=d; qsubtime=t; queue=unics; remote_addres=130.75.6.1;;
	308	(*) printf "\n +++ hostname \"$remote_host\" not allowed";
	309	locat=parameter; exit;;
	310	esac
	311	fi
	312
	313
	314	# EVTL. PRUEFEN, OB ANGEGEBENE QUEUE ZULAESSIG IST
	315	if [[ $no_default_queue != none ]]
	316	then
	317	error=false
	318	ndq=$no_default_queue
	319	case $remote_host in
	320	(ibm) case $ndq in
	321	(p690_express\|p690_standard\|p690_long) error=false;;
	322	(*) error=true;;
	323	esac;;
	324	(ibmb) case $ndq in
	325	(cdata\|cdev\|cexp\|c1\|cshare\|csolo\|cspec) error=false;;
	326	(*) error=true;;
	327	esac;;
	328	(ibmh) case $ndq in
[113]	329	(cdata\|cdev\|cexp\|channi\|cxxl\|c1\|cshare\|csolo\|csoloh3h\|csoloh6h\|csoloh12h\|csoloh1d\|csoloh2d\|cspec) error=false;;
[1]	330	(*) error=true;;
	331	esac;;
	332	(ibms) case $ndq in
	333	(express\|normal\|p_express\|p_normal\|p_normal_1.3\|p_normal_1.7\|grand) error=false;;
	334	(*) error=true;;
	335	esac;;
	336	(ibmy) case $ndq in
	337	(parallel) error=false;;
	338	(*) error=true;;
	339	esac;;
	340	(lctit) case $ndq in
[69]	341	(default\|high\|bes1\|bes2\|sla1\|sla2) error=false;;
[1]	342	(*) error=true;;
	343	esac;;
	344	(t3eb) case $ndq in
	345	(berte\|p50\|p100\|p392\|forfree\|p25himem) error=false;;
	346	(*) error=true;;
	347	esac;;
	348	(t3eh) case $ndq in
	349	(para_t3e\|em\|k\|l\|lm\|comp_t3e\|c\|p\|ht) error=false;;
	350	(*) error=true;;
	351	esac;;
	352	(t3ej2\|t3ej5) case $ndq in
	353	(low\|normal\|high) error=false;;
	354	(*) error=true;;
	355	esac;;
	356	(t3es) case $ndq in
	357	(batch\|serial-4\|pe4\|p48\|pe16\|pe32\|pe64\|pe128) error=false;;
	358	(*) error=true;;
	359	esac;;
	360	(unics) case $ndq in
	361	(unics\|ht) error=false;;
	362	(*) error=true;;
	363	esac;;
	364	esac
	365	if [[ $error = true ]]
	366	then
	367	printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed"
	368	locat=parameter; exit
	369	else
	370	queue=$no_default_queue
	371	fi
	372	fi
	373
	374
	375
	376	# KNOTENNUTZUNG IN ENTWICKLERQUEUE MUSS SHARED SEIN
	377	if [[ $node_usage != shared && $queue = cdev ]]
	378	then
	379	node_usage=shared
	380	fi
	381
	382
	383
	384	# PRUEFEN DER CPU-ZEIT, ZEIT NACH STUNDEN, MINUTEN UND SEKUNDEN
	385	# AUFTEILEN
	386	done=false
	387	while [[ $done = false ]]
	388	do
	389	if (( $cputime <= 0 ))
	390	then
	391	printf "\n +++ wrong cpu-time or cpu-time missing"
	392	printf "\n >>> Please type cpu-time in seconds as INTEGER:"
	393	printf "\n >>> "
	394	read cputime 1>/dev/null 2>&1
	395	else
	396	done=true
	397	fi
	398	done
	399	if [[ $remote_host = nech ]]
	400	then
	401	if (( tasks_per_node != 0 ))
	402	then
	403	(( cputime = cputime * tasks_per_node ))
	404	elif [[ $numprocs != 0 ]]
	405	then
	406	(( cputime = cputime * numprocs ))
	407	fi
	408	fi
	409	(( stunden = cputime / 3600 ))
	410	(( resttime = cputime - stunden * 3600 ))
	411	(( minuten = resttime / 60 ))
	412	(( sekunden = resttime - minuten * 60 ))
	413	timestring=${stunden}:${minuten}:${sekunden}
	414
	415
	416
	417	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	418	done=false
	419	while [[ $done = false ]]
	420	do
	421	if (( memory <= 0 ))
	422	then
	423	printf "\n +++ wrong memory demand or memory demand missing"
	424	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	425	printf "\n >>> "
	426	read memory 1>/dev/null 2>&1
	427	else
	428	done=true
	429	fi
	430	done
	431
[35]	432	if [[ $remote_host = nech \|\| $remote_host = neck ]]
[1]	433	then
	434	if (( tasks_per_node != 0 ))
	435	then
	436	(( Memory = memory * tasks_per_node / 1000 ))
	437	elif [[ $numprocs != 0 ]]
	438	then
	439	(( Memory = memory * numprocs / 1000 ))
	440	else
	441	(( Memory = memory / 1000 ))
	442	fi
	443	fi
	444
	445
	446	# SPEICHERBERECHNUNG BEI OPENMP-NUTZUNG
	447	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	448	then
	449	(( memory = memory * threads_per_task ))
	450	fi
	451
	452
	453	# BERECHNUNG DER ANZAHL DER ZU VERWENDENDEN KNOTEN
	454	if (( tasks_per_node != 0 ))
	455	then
	456	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	457	fi
	458
	459
	460
	461	# HEADER-AUSGABE
	462	if [[ $verify = true ]]
	463	then
	464	printf "\n\n"
	465	printf "#--------------------------------------------------------------# \n"
	466	spalte1=SUBJOB;spalte2=$(date)
	467	printf "\| $spalte1$spalte2 \| \n"
	468	printf "\| \| \n"
	469	printf "\| values of parameters/options: \| \n"
	470	spalte1=local_host$punkte; spalte2=$punkte$local_host
	471	printf "\| $spalte1$spalte2 \| \n"
	472	spalte1=remote_host$punkte; spalte2=$punkte$remote_host
	473	printf "\| $spalte1$spalte2 \| \n"
	474	spalte1=queue$punkte; spalte2=$punkte$queue
	475	printf "\| $spalte1$spalte2 \| \n"
	476	spalte1=memory$punkte; spalte2="$punkte$memory mb"
	477	printf "\| $spalte1$spalte2 \| \n"
	478	spalte1=cputime$punkte; spalte2="$punkte$cputime sec"
	479	printf "\| $spalte1$spalte2 \| \n"
	480	spalte1=job_name$punkte; spalte2="$punkte$job_name"
	481	printf "\| $spalte1$spalte2 \| \n"
	482	printf "#--------------------------------------------------------------# \n\n"
	483
	484
	485	# KONTROLLABFRAGE, OB ALLES O.K.
	486	antwort="dummy"
	487	while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]]
	488	do
	489	read antwort?" >>> continue (y/n) ? "
	490	done
	491	if [[ $antwort = n \|\| $antwort = N ]]
	492	then
	493	locat=verify; exit
	494	fi
	495	printf "\n"
	496	fi
	497
	498
	499
	500	# ZUFALLSKENNUNG GENERIEREN UND JOBNAMEN AUF ZIELRECHNER BESTIMMEN
	501	kennung=$RANDOM
	502	job_on_remhost=${job_name}_${kennung}_$local_host
	503	job_to_send=job_to_send_$kennung
	504	if [[ $delete_dayfile = false ]]
	505	then
	506	remote_dayfile=${local_host}_${job_name}_result_$kennung
	507	local_dayfile=${remote_host}_${job_name}
	508	else
	509	remote_dayfile=/dev/null
	510	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	511	then
	512	notification='# @ notification = never'
	513	fi
	514	fi
	515
	516
	517
	518	# QSUB- ODER LL-KOMMANDOS BZW. SKRIPTE GENERIEREN
	519	if [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs != 0 ]]
	520	then
	521
	522	if [[ $remote_host = ibmy ]]
	523	then
	524	consumable_memory=""
	525	else
	526	consumable_memory="ConsumableMemory($memory mb)"
	527	fi
	528	if [[ $queue = cdev ]]
	529	then
	530	data_limit="# @ data_limit = 1.76gb"
	531	network_to_use="# @ network.mpi = sn_all,shared,ip"
	532	else
	533	if [[ $remote_host = ibms ]]
	534	then
	535	network_to_use="# @ network.mpi = csss,shared,us"
	536	elif [[ $remote_host = ibmy ]]
	537	then
	538	network_to_use=""
	539	else
	540	network_to_use="# @ network.mpi = sn_all,shared,us"
	541	data_limit="# @ data_limit = 1.76gb"
	542	fi
	543	fi
	544
	545	cat > $job_to_send << %%END%%
	546	#!/bin/ksh
	547
	548	# @ job_type = parallel
	549	# @ job_name = palm
	550	# @ wall_clock_limit = ${timestring},$timestring
	551	# @ resources = ConsumableCpus($threads_per_task) $consumable_memory
	552	# @ output = $remote_dayfile
	553	# @ error = $remote_dayfile
	554	# @ image_size = 50
	555	# @ class = $queue
	556	# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes
	557	$network_to_use
	558	$data_limit
	559	$notification
	560
	561	%%END%%
	562
	563	if (( nodes > 0 ))
	564	then
	565
	566	cat >> $job_to_send << %%END%%
	567	# @ node = $nodes
	568	# @ tasks_per_node = $tasks_per_node
	569	# @ node_usage = $node_usage
	570	# @ queue
	571
	572	%%END%%
	573
	574	else
	575
	576	if [[ $remote_host != ibmy ]]
	577	then
	578
	579	cat >> $job_to_send << %%END%%
	580	# @ blocking = unlimited
	581	# @ total_tasks = $numprocs
	582	# @ node_usage = $node_usage
	583	# @ queue
	584
	585	%%END%%
	586
	587	else
	588
	589	cat >> $job_to_send << %%END%%
	590	# @ node = 1
	591	# @ total_tasks = $numprocs
	592	# @ queue
	593
	594	%%END%%
	595
	596	fi
	597
	598	fi
	599
	600	elif [[ $(echo $remote_host \| cut -c1-3) = ibm && $numprocs = 0 ]]
	601	then
	602
	603	cat > $job_to_send << %%END%%
	604	#!/bin/ksh
	605
	606	# @ job_type = serial
	607	# @ node_usage = $node_usage
	608	# @ job_name = palm
	609	# @ wall_clock_limit = ${timestring},$timestring
	610	# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)
	611	# @ output = $remote_dayfile
	612	# @ error = $remote_dayfile
	613	# @ class = $queue
	614	$notification
	615
	616	# @ queue
	617
	618	%%END%%
	619
[108]	620	elif [[ $remote_host = lcfimm ]]
	621	then
	622
	623	if [[ $numprocs != 0 ]]
	624	then
	625	cat > $job_to_send << %%END%%
	626	#!/bin/ksh
	627	#PBS -N $job_name
	628	#PBS -A nersc
	629	#PBS -l walltime=$timestring
	630	#PBS -l nodes=${nodes}:ppn=$tasks_per_node
	631	#PBS -l pmem=${memory}mb
	632	#PBS -m abe
	633	#PBS -M igore@nersc.no
	634	#PBS -o $remote_dayfile
	635	#PBS -j oe
	636	mpd &
	637
	638	%%END%%
	639
	640	else
	641	cat > $job_to_send << %%END%%
	642	#!/bin/ksh
	643	#PBS -N $job_name
	644	#PBS -A nersc
	645	#PBS -l walltime=$timestring
	646	#PBS -l ncpus=1
	647	#PBS -l pmem=${memory}mb
	648	#PBS -m abe
	649	#PBS -M igore@nersc.no
	650	#PBS -o $remote_dayfile
	651	#PBS -j oe
	652
	653	%%END%%
	654
	655	fi
	656
[1]	657	elif [[ $remote_host = nech ]]
	658	then
	659
	660	if (( nodes > 1 ))
	661	then
	662	cat > $job_to_send << %%END%%
	663	#!/bin/ksh
	664	#PBS -l cpunum_prc=$tasks_per_node,cputim_job=$cputime
	665	#PBS -l ${qsubmem}=${Memory}gb
	666	#PBS -b $nodes
	667	#PBS -o $remote_dayfile
	668	#PBS -N palm
	669	#PBS -j o
	670	#PBS -T mpisx
	671
	672	%%END%%
	673
	674	elif [[ $numprocs != 0 ]]
	675	then
	676	cat > $job_to_send << %%END%%
	677	#!/bin/ksh
	678	#PBS -l cpunum_prc=$tasks_per_node,cputim_job=$cputime
	679	#PBS -l ${qsubmem}=${Memory}gb
	680	#PBS -o $remote_dayfile
	681	#PBS -N palm
	682	#PBS -j o
	683
	684	%%END%%
	685
	686	else
	687	cat > $job_to_send << %%END%%
	688	#!/bin/ksh
	689	#PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime
	690	#PBS -o $remote_dayfile
	691	#PBS -j o
	692
	693	%%END%%
	694
	695	fi
	696
[35]	697	elif [[ $remote_host = neck ]]
	698	then
	699
	700	if (( nodes > 1 ))
	701	then
	702	cat > $job_to_send << %%END%%
	703	#!/bin/ksh
	704	#PBS -l cpunum_prc=$tasks_per_node,cputim_job=$cputime
	705	#PBS -l ${qsubmem}=${Memory}gb
	706	#PBS -b $nodes
	707	#PBS -o $remote_dayfile
	708	#PBS -N palm
	709	#PBS -j o
	710	#PBS -T mpisx
	711
	712	%%END%%
	713
	714	elif [[ $numprocs != 0 ]]
	715	then
	716	cat > $job_to_send << %%END%%
	717	#!/bin/ksh
	718	#PBS -q ${queue}
	719	#PBS -l cpunum_prc=$tasks_per_node,cputim_job=$cputime
	720	#PBS -l ${qsubmem}=${Memory}gb
	721	#PBS -o $remote_dayfile
	722	#PBS -N palm
	723	#PBS -j o
	724	#PBS -T mpisx
	725
	726	%%END%%
	727
	728	else
	729	cat > $job_to_send << %%END%%
	730	#!/bin/ksh
	731	#PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime
	732	#PBS -o $remote_dayfile
	733	#PBS -j o
	734
	735	%%END%%
	736
	737	fi
	738
[1]	739	elif [[ $remote_host = lctit ]]
	740	then
	741	cat > $job_to_send << %%END%%
	742	#!/bin/bash
	743	#$ -S /bin/bash
	744	cd $job_catalog
[69]	745	export PATH=$PALM_BIN:\$PATH
	746	echo \$PATH
[1]	747
	748	%%END%%
	749
	750	# OPTIONEN FUER SUBMIT-KOMMANDO ZUSAMMENSTELLEN
[118]	751	# submcom="$submcom -N $job_name -sgeout $remote_dayfile -q default"
[122]	752	submcom="$submcom -g $group_number -N $job_name -rt 4320 -sgeout $remote_dayfile -q $node_usage "
[1]	753
	754	else
	755
	756	cat > $job_to_send << %%END%%
	757	# @\$-q ${queue}
	758	# @\$-l${qsubtime} $timestring
	759	# @\$-l${qsubmem} ${memory}mb
	760	# @\$-o $remote_dayfile
	761	# @\$-eo
	762
	763	%%END%%
	764
	765	fi
	766
	767
	768	# BEI RECHNUNG AUF REMOTE-MASCHINEN RUECKTRANSFER DES DAYFILES PER TRAP
	769	# BEI EXIT VERANLASSEN
	770	# VEKTORRECHNER MUSS EIGENEN JOB STARTEN, DA DORT NOHUP NICHT FUNKTIONIERT
	771	# AUF IBM IN SEOUL IST RUECKTRANSFER ZUR ZEIT GENERELL NICHT MOEGLICH
	772	if [[ $delete_dayfile = false && $remote_host != $local_host ]]
	773	then
	774	echo "set +vx" >> $job_to_send
	775	echo "trap '" >> $job_to_send
	776	echo "set +vx" >> $job_to_send
[35]	777	if [[ $(echo $remote_host \| cut -c1-3) = ibm \|\| $(echo $remote_host \| cut -c1-3) = nec \|\| $remote_host = lctit ]]
[1]	778	then
	779	if [[ $remote_host = ibmb \|\| $remote_host = ibmh ]]
	780	then
	781	return_queue=c1
	782	elif [[ $remote_host = ibms ]]
	783	then
	784	return_queue=p_normal
	785	elif [[ $remote_host = ibmy ]]
	786	then
	787	return_queue=serial
	788	elif [[ $remote_host = lctit ]]
	789	then
[118]	790	return_queue=sla3
[35]	791	elif [[ $remote_host = neck ]]
[1]	792	then
[35]	793	return_queue=S
[1]	794	else
	795	return_queue=unknown
	796	fi
	797
	798	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	799	then
	800
	801	echo "echo \"#!/bin/ksh\" >> scpjob.$kennung" >> $job_to_send
	802	echo "echo \"# @ job_type = serial\" >> scpjob.$kennung" >> $job_to_send
	803	echo "echo \"# @ job_name = transfer\" >> scpjob.$kennung" >> $job_to_send
	804	echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$kennung" >> $job_to_send
	805	echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$kennung " >> $job_to_send
	806	echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
	807	echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send
	808	echo "echo \"# @ class = $return_queue\" >> scpjob.$kennung" >> $job_to_send
	809	echo "echo \"# @ image_size = 10\" >> scpjob.$kennung" >> $job_to_send
	810	echo "echo \"# @ notification = never\" >> scpjob.$kennung" >> $job_to_send
	811
	812	echo "echo \"# @ queue\" >> scpjob.$kennung" >> $job_to_send
	813	echo "echo \" \" >> scpjob.$kennung" >> $job_to_send
	814
	815	echo "echo \"set -x\" >> scpjob.$kennung" >> $job_to_send
	816	echo "echo \"batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$kennung" >> $job_to_send
	817	echo "echo \"exit\" >> scpjob.$kennung" >> $job_to_send
	818
	819	elif [[ $remote_host = nech ]]
	820	then
	821	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
	822	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	823	echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send
	824	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
	825	echo "#PBS -j o" >> $job_to_send
	826	echo " " >> $job_to_send
	827	echo "set -x" >> $job_to_send
	828	echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send
	829	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	830	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	831	echo "%%END%%" >> $job_to_send
	832
[35]	833	elif [[ $remote_host = neck ]]
	834	then
	835	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	836	echo "#PBS -q $return_queue" >> $job_to_send
	837	echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send
	838	echo "#PBS -o last_job_transfer_protocol" >> $job_to_send
	839	echo "#PBS -j o" >> $job_to_send
	840	echo " " >> $job_to_send
	841	echo "set -x" >> $job_to_send
	842	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	843	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	844	echo "%%END%%" >> $job_to_send
	845
[1]	846	elif [[ $remote_host = lctit ]]
	847	then
	848	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	849	echo "set -x" >> $job_to_send
	850	echo "PATH=\$PATH:$job_catalog/../pub" >> $job_to_send
	851	echo "cd $job_catalog" >> $job_to_send
	852	echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	853	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	854	echo "%%END%%" >> $job_to_send
	855
	856	else
	857
	858	echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send
	859	echo "# @\\\$-q $return_queue" >> $job_to_send
	860	echo "# @\\\$-l${qsubtime} 10" >> $job_to_send
	861	echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send
	862	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es ]]
	863	then
	864	echo "# @\$-l mpp_p=0" >> $job_to_send
	865	fi
	866	echo '# @\$-lF 10mb' >> $job_to_send
	867	# echo '# @\$-o /dev/null' >> $job_to_send
	868	echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send
	869	echo '# @\\\$-eo' >> $job_to_send
	870	echo " " >> $job_to_send
	871	if [[ $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	872	then
	873	echo "set +vx" >> $job_to_send
	874	echo ". .profile" >> $job_to_send
	875	fi
	876	echo "set -x" >> $job_to_send
	877	echo "batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send
	878	echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send
	879	echo "%%END%%" >> $job_to_send
	880	fi
	881
	882	if [[ $(echo $remote_host \| cut -c1-3) = ibm ]]
	883	then
	884	echo "llsubmit scpjob.$kennung" >> $job_to_send
	885	elif [[ $remote_host = lctit ]]
	886	then
	887	echo "chmod u+x scpjob.$kennung" >> $job_to_send
	888	echo "rm -rf ${job_catalog}/last_job_transfer_protocol" >> $job_to_send
	889	echo "n1ge -N jobtransfer -q $return_queue -sgeout ${job_catalog}/last_job_transfer_protocol scpjob.$kennung" >> $job_to_send
	890	echo "sleep 10" >> $job_to_send
	891	elif [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 ]]
	892	then
	893	echo "qsub -J n scpjob.$kennung" >> $job_to_send
	894	elif [[ $remote_host = t3es ]]
	895	then
	896	echo "qsub -J n -s /bin/ksh scpjob.$kennung" >> $job_to_send
	897	else
	898	echo "qsub scpjob.$kennung" >> $job_to_send
	899	fi
	900	echo "rm scpjob.$kennung" >> $job_to_send
	901	if [[ $remote_host = nech ]]
	902	then
	903	echo "cd -" >> $job_to_send
	904	fi
	905	else
	906	# echo "ftpcopy -d $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send
	907	echo "nohup ftpcopy -d -w 15 $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send
	908	fi
	909	echo "set -x" >> $job_to_send
	910	echo " ' exit" >> $job_to_send
	911	echo "set -x" >> $job_to_send
	912	fi
	913
	914
	915
	916	# EIGENTLICHE JOB-DATEI AN QSUB-KOMMANDOS ANHAENGEN
	917	cat $file_to_send >> $job_to_send
[69]	918
[1]	919	if [[ $remote_host = ibm ]]
	920	then
	921	echo " " >> $job_to_send
	922	echo "exit" >> $job_to_send
	923	fi
[69]	924	if [[ $remote_host = lctit ]]
	925	then
	926	echo " " >> $job_to_send
	927	echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send
	928	fi
[1]	929
	930
	931
	932	# USER-NAME AUF ZIELRECHNER AUS .NETRC-DATEI ERMITTELN
	933	if [[ -z $remote_user ]]
	934	then
	935	if [[ $remote_host = t3eb \|\| $remote_host = t3eh \|\| $remote_host = t3ej2 \|\| $remote_host = t3ej5 \|\| $remote_host = t3es \|\| $remote_host = vpp ]]
	936	then
	937	grep $remote_addres ~/.netrc \| read dum dum dum remote_user dum dum
	938	fi
	939	fi
	940
	941
	942
	943	# JOB AUF ZIELRECHNER TRANSFERIEREN BZW. INS JOBVERZEICHNIS KOPIEREN
	944	if [[ $no_submit = false ]]
	945	then
	946	if [[ $remote_host != $local_host ]]
	947	then
	948	[[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..."
[82]	949	if [[ $remote_host = ibms \|\| $remote_host = ibmy ]] # ssh on ibms cannot handle "~/"
[1]	950	then
[82]	951	job_catalog_save=$job_catalog
	952	job_catalog=job_queue
	953	elif [[ $remote_host = nech ]]
	954	then
	955	job_catalog_save=$job_catalog
	956	job_catalog=/hpf/b/${remote_user}/job_queue
	957	fi
	958	if [[ $local_host = decalpha ]]
	959	then
	960	# VERWENDUNG VON SCP AUF DECALPHA FRAGT FEHLERHAFTERWEISE
	961	# PASSWORT AB
	962	/bin/scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
	963	elif [[ $remote_host = nech ]]
	964	then
	965	# DATEIEN KOENNEN NUR UEBER DEN ARCHIVE-SERVER DES DKRZ
	966	# TRANSFERIERT WERDEN
	967	scp $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost
[1]	968	else
[82]	969	scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost
[1]	970	fi
[82]	971	if [[ $? = 1 ]]
	972	then
	973	locat=scp; exit
	974	fi
	975	if [[ $remote_host = ibms ]]
	976	then
	977	job_catalog=$job_catalog_save
	978	fi
[1]	979	[[ $verify = true ]] && printf "\n >>> finished\n"
	980	else
	981	eval job_catalog=$job_catalog
	982	cp $job_to_send ${job_catalog}/$job_on_remhost
	983	fi
	984
	985
	986
	987	# NQS- BZW. LOADLEVELER-JOB STARTEN
	988	if [[ $remote_host != $local_host ]]
	989	then
	990	[[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n"
[82]	991	if [[ $remote_host != lctit ]]
[1]	992	then
[82]	993	ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost"
[1]	994	else
[82]	995	# TIT ERLAUBT NUR DIE AUSFÜHRUNG GANZ BESTIMMTER KOMMANDOS
	996	# MIT SSH, DESHALB AUFRUF PER PIPE
	997	# UEBERGANGSWEISE CHECK, OB N1GE ENVIRONMENT WIRKLICH VERFUEGBAR
	998	print "cd $job_catalog; chmod u+x $job_on_remhost" \| ssh $remote_addres -l $remote_user > /dev/null 2>&1
	999	echo "first try" > send_protocol
	1000	while [[ $(cat send_protocol \| grep -c "Forwarding to N1GE") = 0 ]]
	1001	do
	1002	if [[ $(cat send_protocol \| grep -c "first try") = 1 ]]
	1003	then
	1004	printf "\n trying to submit job to TIT cluster..."
	1005	else
	1006	printf "\n +++ failed ... trying to submit again ..."
	1007	fi
	1008	print "cd $job_catalog; $submcom $job_on_remhost" \| ssh $remote_addres -l $remote_user > send_protocol 2>&1
	1009	cat send_protocol
	1010	done
	1011	sleep 10
	1012	print "cd $job_catalog; rm $job_on_remhost" \| ssh $remote_addres -l $remote_user > /dev/null 2>&1
	1013	echo "$submcom $job_on_remhost"
	1014	rm send_protocol
	1015	fi
[1]	1016
	1017	[[ $verify = true ]] && printf " >>> o.k.\n"
	1018	else
	1019	cd $job_catalog
	1020	if [[ $(echo $local_host \| cut -c1-3) = ibm ]]
	1021	then
	1022	eval $submcom $job_on_remhost
[108]	1023	elif [[ $local_host = lcfimm ]]
	1024	then
	1025	eval $submcom $job_on_remhost
	1026	echo "$submcom $job_on_remhost"
	1027	chmod u+x $job_on_remhost
[1]	1028	elif [[ $local_host = lctit ]]
	1029	then
	1030	eval $submcom $job_on_remhost
	1031	echo "$submcom $job_on_remhost"
	1032	chmod u+x $job_on_remhost
	1033	elif [[ $local_host = nech ]]
	1034	then
	1035	if [[ $queue = default ]]
	1036	then
	1037	eval $submcom $job_on_remhost
	1038	else
	1039	eval $submcom -q $queue $job_on_remhost
	1040	fi
	1041	else
	1042	qsub $job_on_remhost
	1043	fi
[69]	1044	# JOBFILE DARF AUF LCTIT NICHT GELOESCHT WERDEN!! GESCHIEHT ERST AM JOBENDE
	1045	[[ $local_host != lctit ]] && rm $job_on_remhost
[1]	1046	cd - > /dev/null
	1047	fi
	1048	fi
	1049
	1050
	1051
	1052	# ABSCHLUSSARBEITEN
	1053
	1054	if [[ $no_submit = false ]]
	1055	then
	1056	rm $job_to_send
	1057	fi
	1058	[[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n"

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