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source: palm/trunk/SCRIPTS/palmbuild @ 2836

Last change on this file since 2836 was 2834, checked in by raasch, 7 years ago
fname renamed jobname
Property svn:executable set to ``* Property svn:keywords set to `Rev`
File size: 31.0 KB

Rev	Line
[2380]	1	#!/bin/bash
	2
	3	# palmbuild - script for compiling the PALM code and its utility programs
	4
	5	#------------------------------------------------------------------------------#
[2696]	6	# This file is part of the PALM model system.
[2380]	7	#
	8	# PALM is free software: you can redistribute it and/or modify it under the terms
	9	# of the GNU General Public License as published by the Free Software Foundation,
	10	# either version 3 of the License, or (at your option) any later version.
	11	#
	12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	15	#
	16	# You should have received a copy of the GNU General Public License along with
	17	# PALM. If not, see <http://www.gnu.org/licenses/>.
	18	#
[2718]	19	# Copyright 2017-2018 Leibniz Universitaet Hannover
[2380]	20	#------------------------------------------------------------------------------#
	21	#
	22	# Current revisions:
	23	# ------------------
	24	#
[2410]	25	#
[2380]	26	# Former revisions:
	27	# -----------------
[2732]	28	# $Id: palmbuild 2718 2018-01-02 08:49:38Z maronga $
[2834]	29	# "fname" renamed to "jobname"
	30	#
	31	# 2718 2018-01-02 08:49:38Z maronga
[2716]	32	# Corrected "Former revisions" section
	33	#
	34	# 2696 2017-12-14 17:12:51Z kanani
	35	# Change in file header (GPL part)
	36	#
	37	# 2566 2017-10-20 08:50:47Z raasch
[2566]	38	# informative messages switched of almost completely in silent mode
	39	# two header blocks merged into one
	40	#
	41	# 2506 2017-09-29 08:30:37Z raasch
[2506]	42	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
	43	# host configuration added to SOURCES_FOR_RUN_... folder name
	44	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
	45	# host_identifier renamed host_configuration
	46	#
	47	# 2500 2017-09-25 11:10:03Z raasch
[2500]	48	# bugfix for r2492
	49	#
	50	# 2492 2017-09-21 14:18:48Z raasch
[2489]	51	# ask for compilation, if SOURCES_FOR_RUN_... exists
	52	#
	53	# 2487 2017-09-21 11:30:10Z raasch
[2487]	54	# bugfix: abort in case of compiling/linking errors in silent mode
	55	#
	56	# 2422 2017-09-08 08:25:41Z raasch
[2422]	57	# initial revision
[2410]	58	#
[2380]	59	#------------------------------------------------------------------------------#
	60	# palmbuild - script for compiling the PALM code and its utility programs
	61	#
	62	# Procedure to compile code on local and remote hosts using the
	63	# make-mechanism. The source code must be provided on the local host.
	64	#
	65	# @note This script does not work on MAC OS
	66	#------------------------------------------------------------------------------#
	67
	68
	69	# VARIABLE DECLARATIONS + DEFAULT VALUES
	70	calltime=""
	71	column1=""
	72	column2=""
[2506]	73	host_configuration=default
[2380]	74	locat=normal
	75	makefile=""
	76	make_options=""
	77	module_commands=""
	78	program_name=palm
	79	remote_ip=""
	80	silent=false
	81	ssh_key=""
	82	suf=f90
[2506]	83	use_existing_sources_folder=false
[2732]	84	version="palmbuild 1.0 Rev$Rev: 2834 $"
[2380]	85	working_directory=`pwd`
	86
	87
	88
	89	# ERROR HANDLING
	90	# IN CASE OF EXIT:
[2506]	91	trap 'rm -rf ${source_path}/${host_configuration}_last_make_protocol
	92	if [[ $locat != normal ]]
[2380]	93	then
	94	printf "\n\n +++ palmbuild killed \n\n"
	95	exit 1
	96	else
[2566]	97	if [[ $silent = false ]]
	98	then
	99	printf "\n\n *** palmbuild finished \n\n"
	100	fi
[2380]	101	exit 0
[2489]	102	fi
	103	' exit
[2380]	104
	105
	106	# IN CASE OF TERMINAL-BREAK:
	107	trap 'printf "\n\n +++ palmbuild killed by \"^C\" \n\n"
[2506]	108	rm ${source_path}/${host_configuration}_last_make_protocol
[2380]	109	exit
	110	' 2
	111
	112
	113
	114	# READ SHELLSCRIPT-OPTIONS
[2506]	115	while getopts :d:h:m:s:S:uvV option
[2380]	116	do
	117	case $option in
[2834]	118	(d) jobname=$OPTARG;;
[2506]	119	(h) host_configuration=$OPTARG;;
[2380]	120	(m) makefile=$OPTARG;;
	121	(s) suf=$OPTARG;;
	122	(S) source_list="$OPTARG";;
	123	(v) silent=true;;
[2506]	124	(V) use_existing_sources_folder=true;;
[2380]	125	(\?) printf "\n +++ unknown option $OPTARG \n";
	126	locat=parameter; exit;;
	127	esac
	128	done
	129
	130
[2834]	131	# FOR COMPATIBILITY REASONS SET OLD ENVIRONMENT VARIABLE
	132	export fname=$jobname
	133
	134
[2506]	135	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
	136	config_file=.palm.config.$host_configuration
[2834]	137	sources_for_run_catalog=SOURCES_FOR_RUN_${host_configuration}_$jobname
[2380]	138
	139
	140	# CHECK, IF CONFIGURATION-FILE EXISTS
	141	if [[ ! -f $config_file ]]
	142	then
	143	printf "\n +++ configuration file: "
	144	printf "\n $config_file"
	145	printf "\n does not exist"
	146	locat=configuration; exit
	147	fi
	148
	149
	150	# ### is this really required?
	151	config_file=$PWD/$config_file
	152
	153
	154	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
	155	while read line
	156	do
	157
	158	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
	159	eval line=\"$line\"
	160
	161
	162	# INTERPRET THE LINE
	163	if [[ "$(echo $line)" = "" ]]
	164	then
	165
	166	# EMPTY LINE, NO ACTION
	167	continue
	168
	169	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
	170	then
	171
	172	# LINE IS A COMMENT LINE
	173	continue
	174
	175	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
	176	then
	177
	178	# LINE DEFINES AN ENVIRONMENT-VARIABLE
	179	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
	180	value=`echo $line \| cut -d" " -s -f2-`
	181
	182	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
	183	# "::" IS REPLACED BY ":".
	184	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	185
	186
	187	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
	188	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
	189	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
	190	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
	191	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
	192	# CONFIGURATION-FILE.
	193	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	194	then
	195	eval export $var="\$value"
	196
	197	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
	198	if [[ $do_trace = true ]]
	199	then
	200	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	201	fi
	202	fi
	203
	204	else
	205
	206	# SKIP ALL OTHER LINES
	207	continue
	208
	209	fi
	210
	211	done < $config_file
	212
	213
[2404]	214	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
	215	if [[ "$base_directory" = "" ]]
	216	then
	217	printf "\n +++ no base directory found in configuration file"
	218	locat=config_file; exit
	219	else
	220	if [[ ! -d $base_directory ]]
	221	then
	222	printf "\n\n +++ base directory \"$base_directory\" "
	223	printf "\n does not exist"
	224	locat=source_path; exit
	225	fi
	226	fi
	227
	228
[2380]	229	# CHECK SOURCE-CODE PATH
	230	if [[ "$source_path" = "" ]]
	231	then
	232	printf "\n +++ no source path found in configuration file"
	233	locat=config_file; exit
	234	else
	235	if [[ ! -d $source_path ]]
	236	then
	237	printf "\n\n +++ source path \"$source_path\" "
	238	printf "\n does not exist"
	239	locat=source_path; exit
	240	fi
	241	fi
	242
	243
	244	# CHECK MAKEFILE
	245	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	246	if [[ ! -f $makefile ]]
	247	then
	248	printf "\n +++ makefile: "
	249	printf "\n $makefile"
	250	printf "\n does not exist"
	251	locat=makefile; exit
	252	fi
	253
	254
	255	# CHECK COMPILERNAME
	256	if [[ "$compiler_name" = "" ]]
	257	then
	258	printf "\n +++ no compiler name found in configuration file"
	259	locat=config_file; exit
	260	fi
	261
	262
	263	# CHECK SERIAL COMPILERNAME
	264	if [[ "$compiler_name_ser" = "" ]]
	265	then
	266	printf "\n +++ no compiler name for serial compilation in configuration file"
	267	locat=config_file; exit
	268	fi
	269
	270
	271	# DETERMINE SSH-KEY TO BE USED
	272	if [[ "$ssh_key" != "" ]]
	273	then
	274	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
	275	fi
	276
	277
	278	#CHECK CPP-OPTIONS
	279	if [[ "$cpp_options" = "" ]]
	280	then
	281	printf "\n +++ WARNING: no cpp-options found in configuration file"
	282	fi
	283
	284
	285	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
	286	if [[ "$remote_ip" != "" ]]
	287	then
	288
	289	if [[ "$remote_username" = "" ]]
	290	then
	291	printf "\n +++ no user name given in configuration file"
	292	locat=config_file; exit
	293	fi
	294
	295	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
	296	# THE $
	297	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
	298	line=`grep %remote_source_path $config_file`
	299	if [[ "$line" != "" ]]
	300	then
	301	remote_source_path=`echo $line \| cut -d" " -s -f2`
	302	else
	303	line=`grep %source_path $config_file`
	304	remote_source_path=`echo $line \| cut -d" " -s -f2`
	305	fi
	306
[2404]	307	line=`grep %base_directory $config_file`
[2506]	308	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${host_configuration}
[2380]	309
	310	else
	311
[2506]	312	make_depository=${base_directory}/MAKE_DEPOSITORY_${host_configuration}
[2380]	313
	314	fi
	315
	316	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
	317	if [[ $silent = false ]]
	318	then
[2566]	319	calltime=$(date)
	320	printf "\n"
	321	printf "#------------------------------------------------------------------------# \n"
	322	printf "\| %-40s%30s \| \n" "$version" "$calltime"
	323	printf "\| \| \n"
	324	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
	325	column2=$(echo $config_file \| cut -c1-57 )
	326	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
	327	line=$(echo "$config_file" \| cut -c58-)
	328	while [[ "$line" != "" ]]
[2380]	329	do
[2566]	330	column1=""
	331	column2=$(echo $line \| cut -c1-57 )
	332	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	333	line=$(echo "$line" \| cut -c58-)
[2380]	334	done
[2566]	335	column2=$(echo $makefile \| cut -c1-57 )
	336	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
	337	line=$(echo "$makefile" \| cut -c58-)
	338	while [[ "$line" != "" ]]
	339	do
	340	column1=""
	341	column2=$(echo $line \| cut -c1-57 )
	342	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	343	line=$(echo "$line" \| cut -c58-)
	344	done
	345	column2=$(echo $source_path \| cut -c1-57 )
	346	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
	347	line=$(echo "$source_path" \| cut -c58-)
	348	while [[ "$line" != "" ]]
	349	do
	350	column1=""
	351	column2=$(echo $line \| cut -c1-57 )
	352	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	353	line=$(echo "$line" \| cut -c58-)
	354	done
	355	printf "\| \| \n"
	356
[2380]	357	if [[ "$remote_ip" != "" ]]
	358	then
[2506]	359	column2="$host_configuration"
[2566]	360	printf "\| %-20s%-50s \| \n" "host configuration:" "$column2"
[2404]	361	column2=$(echo "$make_depository" \| cut -c1-50 )
[2380]	362	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
	363	else
[2506]	364	column2="$host_configuration"
[2420]	365	printf "\| %-20s%-50s \| \n" "host identifier:" "$column2"
[2404]	366	column2=$(echo "$make_depository" \| cut -c1-50 )
[2380]	367	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
	368	fi
[2404]	369	line=$(echo "$make_depository" \| cut -c51-)
	370	while [[ "$line" != "" ]]
	371	do
	372	column1=""
	373	column2=$(echo "$line" \| cut -c1-50 )
	374	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	375	line=$(echo "$line" \| cut -c51-)
	376	done
[2566]	377
[2380]	378	if [[ "$remote_ip" != "" ]]
	379	then
	380	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
	381	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
	382	else
	383	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
	384	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
	385	fi
[2566]	386
[2380]	387	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
	388	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
[2566]	389
[2380]	390	if [[ "$make_options" != "" ]]
	391	then
	392	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
	393	fi
	394	column2=$(echo "$cpp_options" \| cut -c1-50 )
	395	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
	396	line=$(echo "$cpp_options" \| cut -c51-)
	397	while [[ "$line" != "" ]]
	398	do
	399	column1=""
	400	column2=$(echo "$line" \| cut -c1-50 )
	401	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	402	line=$(echo "$line" \| cut -c51-)
	403	done
	404	column2=$(echo "$compiler_options" \| cut -c1-50 )
	405	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
	406	line=$(echo "$compiler_options" \| cut -c51-)
	407	while [[ "$line" != "" ]]
	408	do
	409	column1=""
	410	column2=$(echo "$line" \| cut -c1-50 )
	411	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	412	line=$(echo "$line" \| cut -c51-)
	413	done
[2388]	414	column2=$(echo "$linker_options" \| cut -c1-50 )
	415	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
	416	line=$(echo "$linker_options" \| cut -c51-)
[2380]	417	while [[ "$line" != "" ]]
	418	do
	419	column1=""
	420	column2=$(echo "$line" \| cut -c1-50 )
	421	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	422	line=$(echo "$line" \| cut -c51-)
	423	done
	424	if [[ "$login_init_cmd" != "" ]]
	425	then
	426	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
	427	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
	428	line=$(echo "$login_init_cmd" \| cut -c51-)
	429	while [[ "$line" != "" ]]
	430	do
	431	column1=""
	432	column2=$(echo "$line" \| cut -c1-50 )
	433	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	434	line=$(echo "$line" \| cut -c51-)
	435	done
	436	fi
	437	if [[ "$module_commands" != "" ]]
	438	then
	439	column2=$(echo "$module_commands" \| cut -c1-50 )
	440	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
	441	line=$(echo "$module_commands" \| cut -c51-)
	442	while [[ "$line" != "" ]]
	443	do
	444	column1=""
	445	column2=$(echo "$line" \| cut -c1-50 )
	446	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	447	line=$(echo "$line" \| cut -c51-)
	448	done
	449	fi
	450	printf "#------------------------------------------------------------------------# \n"
	451
[2566]	452	answer=dummy
	453	printf "\n"
	454	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
	455	do
	456	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
	457	read answer
	458	done
	459	if [[ $answer = a \|\| $answer = A ]]
[2380]	460	then
[2566]	461	locat=user_abort; exit
[2380]	462	fi
[2566]	463	if [[ $answer = c \|\| $answer = C ]]
	464	then
	465	silent=true
	466	fi
	467	fi
[2380]	468
	469
[2566]	470	# TAR THE SOURCES AND MAKEFILES
	471	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
	472	# THEM TOO
	473	if [[ $silent = false ]]
	474	then
	475	printf "\n\n *** tar of makefile and source files in"
	476	printf "\n $source_path\n"
	477	fi
	478	cd $source_path
	479	cp -p ../UTIL/combine_plot_fields.f90 .
	480	cp -p ../UTIL/compare_palm_logs.f90 .
	481	cp -p ../UTIL/Makefile_utilities .
	482	tar -cf ${program_name}_sources.tar Makefile* *.$suf
	483	rm combine_plot_fields.f90 compare_palm_logs.f90 Makefile_utilities
	484
	485
	486	# MAKE ON REMOTE HOST
	487	if [[ "$remote_ip" != "" ]]
	488	then
	489
	490	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
[2834]	491	if [[ "$jobname" = "" ]]
[2380]	492	then
	493
[2566]	494	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
	495	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
	496	if [[ $silent = false ]]
[2380]	497	then
[2566]	498	echo " "
[2404]	499	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
	500	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	501	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
[2566]	502	else
	503	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	504	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
	505	fi
[2380]	506
	507
	508
[2566]	509
	510	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
	511	if [[ $silent = false ]]
	512	then
[2380]	513	echo " *** untar previous update on remote host, if existing"
[2566]	514	fi
	515	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	516
	517
[2566]	518	# UNTAR CURRENT SOURCES ON REMOTE HOST
	519	if [[ $silent = false ]]
	520	then
[2380]	521	echo " *** untar current sources on remote host"
[2566]	522	fi
	523	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	524
	525
[2566]	526	# CREATE INIT AND MODULE COAMMNDS
	527	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
	528	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
[2380]	529
	530
[2566]	531	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
	532	if [[ $silent = false ]]
	533	then
[2380]	534	echo " "
	535	echo " *** creating utilities on remote host"
[2566]	536	fi
	537	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	538	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	539
[2566]	540	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	541	then
	542	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
	543	printf "\n for host configuration \"$host_configuration\" "
	544	if [[ $silent = false ]]
[2380]	545	then
[2566]	546	answer=dummy
	547	printf "\n"
	548	while [[ "$answer" != c && "$answer" != k ]]
	549	do
	550	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	551	read answer
	552	if [[ "$answer" = l ]]
[2380]	553	then
[2566]	554	more ${host_configuration}_last_make_protocol
[2380]	555	fi
[2566]	556	done
	557	if [[ $answer = k ]]
	558	then
[2487]	559	locat=user_abort; exit
[2380]	560	fi
[2566]	561	else
	562	# ABORT ANYWAY
	563	locat=user_abort; exit
[2380]	564	fi
[2566]	565	fi
[2380]	566
	567
[2566]	568	# NOW COMPILE THE PALM CODE
	569	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
	570	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
	571	# MAY E.G. MISS THE COMPILER-PATHS)
	572	if [[ $silent = false ]]
	573	then
[2380]	574	echo " "
	575	echo " *** compile PALM sources on remote host"
[2566]	576	fi
	577	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	578	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	579
[2566]	580	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	581	then
	582	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	583	if [[ $silent = false ]]
[2380]	584	then
[2566]	585	answer=dummy
	586	printf "\n"
	587	while [[ "$answer" != c && "$answer" != k ]]
	588	do
	589	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	590	read answer
	591	if [[ "$answer" = l ]]
[2380]	592	then
[2566]	593	more ${host_configuration}_last_make_protocol
[2380]	594	fi
[2566]	595	done
	596	if [[ $answer = k ]]
	597	then
[2487]	598	locat=user_abort; exit
[2380]	599	fi
[2566]	600	else
	601	# ABORT ANYWAY
	602	locat=user_abort; exit
[2380]	603	fi
[2566]	604	fi
[2380]	605
[2566]	606	# TAR UPDATED VERSION ON THE REMOTE HOST
	607	if [[ $silent = false ]]
	608	then
[2380]	609	printf "\n *** tar update on remote host ..."
[2566]	610	fi
	611	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	612
	613
[2566]	614	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
	615	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
	616	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
[2834]	617	elif [[ "$jobname" != "" ]]
[2566]	618	then
	619
	620	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
	621	# AND ASK, IF THEY SHALL BE USED
	622	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${host_configuration}_last_make_protocol
	623	if [[ $(grep -c "sources for run found" ${host_configuration}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
[2380]	624	then
[2834]	625	printf "\a\n *** compiled sources for run \"$jobname\" found on remote host in folder"
[2566]	626	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
	627	printf "\n will be used!"
	628	exit
	629	fi
[2380]	630
[2566]	631	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
	632	if [[ $silent = false ]]
	633	then
[2506]	634	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on remote host to $sources_for_run_catalog \n"
[2566]	635	fi
	636	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	637
	638
[2566]	639	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
	640	if [[ $silent = false ]]
	641	then
[2506]	642	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
	643	printf "\n to $sources_for_run_catalog on remote host \n"
[2566]	644	fi
	645	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
[2380]	646
	647
[2566]	648	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
	649	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
	650	then
	651
	652	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	653	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
	654	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
	655	if [[ $silent = false ]]
[2380]	656	then
	657	echo " *** execute \"make\" on remote host"
[2566]	658	fi
	659	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	660
[2566]	661	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	662	then
	663	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	664	if [[ $silent = false ]]
[2380]	665	then
[2566]	666	answer=dummy
	667	printf "\n"
	668	while [[ "$answer" != c && "$answer" != k ]]
	669	do
	670	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	671	read answer
	672	if [[ "$answer" = l ]]
[2380]	673	then
[2566]	674	more ${host_configuration}_last_make_protocol
[2380]	675	fi
[2566]	676	done
	677	if [[ $answer = k ]]
	678	then
[2506]	679	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2487]	680	locat=user_abort; exit
[2380]	681	fi
[2566]	682	else
	683	# ABORT ANYWAY
	684	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	685	locat=user_abort; exit
[2380]	686	fi
[2566]	687	fi
[2380]	688
[2566]	689	else
[2380]	690
[2566]	691	echo " *** nothing to compile for this run"
[2380]	692
	693	fi
	694
[2566]	695	fi
[2380]	696
[2566]	697	rm -rf ${source_path}/${host_configuration}_last_make_protocol
[2380]	698
	699
[2566]	700	# MAKE ON LOCAL HOST
	701	else
[2380]	702
[2566]	703
	704	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
	705	# LOCAL HOST
[2834]	706	if [[ "$jobname" = "" ]]
[2566]	707	then
	708
	709	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
	710	if [[ "$login_init_cmd" != "" ]]
[2380]	711	then
[2566]	712	$login_init_cmd
	713	fi
[2380]	714
[2566]	715	if [[ "$module_commands" != "" ]]
	716	then
	717	$module_commands
	718	fi
[2380]	719
	720
[2566]	721	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
	722	eval make_depository=$make_depository
	723	if [[ ! -d $make_depository ]]
	724	then
	725	if mkdir -p $make_depository
[2380]	726	then
[2566]	727	if [[ $silent = false ]]
[2380]	728	then
	729	printf "\n\n *** directory for local make depository:"
[2404]	730	printf "\n $make_depository"
[2380]	731	printf "\n was created\n"
	732	fi
[2566]	733	else
	734	printf "\n +++ directory for local make depository:"
	735	printf "\n $make_depository"
	736	printf "\n cannot be created"
	737	locat=local_depository; exit
[2380]	738	fi
[2566]	739	fi
[2380]	740
[2566]	741	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
	742	if [[ $silent = false ]]
	743	then
[2380]	744	echo " "
	745	echo " *** untar current source sources on local host in"
[2404]	746	echo " $make_depository"
[2566]	747	fi
	748	cd $make_depository
	749	cp $source_path/${program_name}_sources.tar .
	750	tar xf ${program_name}_sources.tar
[2380]	751
	752
[2566]	753	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
	754	if [[ $silent = false ]]
	755	then
[2380]	756	echo " "
	757	echo " *** creating utilities on local host"
[2566]	758	fi
	759	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
[2380]	760
	761
[2566]	762	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
	763	if [[ $silent = false ]]
	764	then
[2380]	765	echo " "
	766	echo " *** compile PALM sources on local host"
[2566]	767	fi
[2380]	768
[2566]	769	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	770
[2566]	771	if [[ $? != 0 ]]
	772	then
	773	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	774	if [[ $silent = false ]]
[2380]	775	then
[2566]	776	answer=dummy
	777	printf "\n"
	778	while [[ "$answer" != c && "$answer" != k ]]
	779	do
	780	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	781	read answer
	782	if [[ "$answer" = l ]]
[2380]	783	then
[2566]	784	more ${host_configuration}_last_make_protocol
[2380]	785	fi
[2566]	786	done
	787	if [[ $answer = k ]]
	788	then
[2487]	789	locat=user_abort; exit
[2380]	790	fi
[2566]	791	else
	792	# ABORT ANYWAY
	793	locat=user_abort; exit
[2380]	794	fi
[2566]	795	fi
[2380]	796
	797
[2566]	798	# TAR NEW VERSION ON LOCAL HOST
	799	if [[ $silent = false ]]
	800	then
[2380]	801	printf "\n *** tar update on local host ..."
[2566]	802	fi
	803	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
[2380]	804
[2566]	805	else
[2380]	806
[2566]	807	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
	808	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
	809	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
[2380]	810
[2566]	811	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
	812	# AND ASK, IF THEY SHALL BE USED
	813	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
	814	then
[2834]	815	printf "\a\n *** compiled sources for run \"$jobname\" found on local host in folder"
[2566]	816	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
	817	printf "\n will be used!"
	818	exit
	819	fi
[2489]	820
[2566]	821	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
	822	if [[ ! -d ${make_depository} ]]
	823	then
	824	printf "\n +++ directory for local make depository:"
	825	printf "\n $make_depository"
	826	printf "\n not found. Please run \"palmbuild -h $host_configuration\" "
	827	locat=make_depository; exit
	828	fi
[2380]	829
	830
[2566]	831	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
	832	if [[ $silent = false ]]
	833	then
[2506]	834	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on local host to "
	835	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
[2566]	836	fi
	837	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
	838	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
	839	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
	840	cd $fast_io_catalog/${sources_for_run_catalog}
	841	tar xf ${program_name}_current_version.tar
[2380]	842
	843
[2566]	844	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
	845	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
	846	if [[ $silent = false ]]
	847	then
[2506]	848	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
	849	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
[2566]	850	fi
	851	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
[2380]	852
	853
[2566]	854	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
	855	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
	856	then
	857
	858	if [[ $silent = false ]]
[2380]	859	then
	860	echo " *** execute \"make\" on local host"
[2566]	861	fi
	862	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
	863	[[ "$module_commands" != "" ]] && $module_commands
[2380]	864
[2566]	865	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
[2380]	866
[2566]	867	if [[ $? != 0 ]]
	868	then
	869
	870	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	871	if [[ $silent = false ]]
[2380]	872	then
[2566]	873	answer=dummy
	874	printf "\n"
	875	while [[ "$answer" != c && "$answer" != k ]]
	876	do
	877	printf " >>> continue / kill palmbuild (c/k) ? "
	878	read answer
	879	done
	880	if [[ $answer = k ]]
[2380]	881	then
[2506]	882	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
[2487]	883	locat=user_abort; exit
[2380]	884	fi
[2566]	885	else
	886	# ABORT ANYWAY
	887	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
	888	locat=user_abort; exit
[2380]	889	fi
[2566]	890	fi
[2380]	891
[2566]	892	else
[2380]	893
[2566]	894	echo " *** nothing to compile for this run"
[2380]	895
[2566]	896	fi
[2380]	897
	898	fi
[2566]	899	fi

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