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source: palm/trunk/SCRIPTS/palmbuild @ 2582

Last change on this file since 2582 was 2566, checked in by raasch, 7 years ago
palmrun adjusted for grid engine batch systems, informative messages reduced and reformatted
Property svn:executable set to ``* Property svn:keywords set to `Id`
File size: 30.7 KB

Rev	Line
[2380]	1	#!/bin/bash
	2
	3	# palmbuild - script for compiling the PALM code and its utility programs
	4
	5	#------------------------------------------------------------------------------#
	6	# This file is part of PALM.
	7	#
	8	# PALM is free software: you can redistribute it and/or modify it under the terms
	9	# of the GNU General Public License as published by the Free Software Foundation,
	10	# either version 3 of the License, or (at your option) any later version.
	11	#
	12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	15	#
	16	# You should have received a copy of the GNU General Public License along with
	17	# PALM. If not, see <http://www.gnu.org/licenses/>.
	18	#
	19	# Copyright 2017 Leibniz Universitaet Hannover
	20	#------------------------------------------------------------------------------#
	21	#
	22	# Current revisions:
	23	# ------------------
	24	#
[2410]	25	#
[2380]	26	# Former revisions:
	27	# -----------------
	28	# $Id: palmbuild 2566 2017-10-20 08:50:47Z hellstea $
[2566]	29	# informative messages switched of almost completely in silent mode
	30	# two header blocks merged into one
	31	#
	32	# 2506 2017-09-29 08:30:37Z raasch
[2506]	33	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
	34	# host configuration added to SOURCES_FOR_RUN_... folder name
	35	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
	36	# host_identifier renamed host_configuration
	37	#
	38	# 2500 2017-09-25 11:10:03Z raasch
[2500]	39	# bugfix for r2492
	40	#
	41	# 2492 2017-09-21 14:18:48Z raasch
[2489]	42	# ask for compilation, if SOURCES_FOR_RUN_... exists
	43	#
	44	# 2487 2017-09-21 11:30:10Z raasch
[2487]	45	# bugfix: abort in case of compiling/linking errors in silent mode
	46	#
	47	# 2422 2017-09-08 08:25:41Z raasch
[2422]	48	# initial revision
[2410]	49	#
[2380]	50	#------------------------------------------------------------------------------#
	51	# palmbuild - script for compiling the PALM code and its utility programs
	52	#
	53	# Procedure to compile code on local and remote hosts using the
	54	# make-mechanism. The source code must be provided on the local host.
	55	#
	56	# @note This script does not work on MAC OS
	57	#------------------------------------------------------------------------------#
	58
	59
	60	# VARIABLE DECLARATIONS + DEFAULT VALUES
	61	calltime=""
	62	column1=""
	63	column2=""
[2506]	64	host_configuration=default
[2380]	65	locat=normal
	66	makefile=""
	67	make_options=""
	68	module_commands=""
	69	program_name=palm
	70	remote_ip=""
	71	silent=false
	72	ssh_key=""
	73	suf=f90
[2506]	74	use_existing_sources_folder=false
[2422]	75	version="palmbuild 1.0 Rev$Rev: 2316 $"
[2380]	76	working_directory=`pwd`
	77
	78
	79
	80	# ERROR HANDLING
	81	# IN CASE OF EXIT:
[2506]	82	trap 'rm -rf ${source_path}/${host_configuration}_last_make_protocol
	83	if [[ $locat != normal ]]
[2380]	84	then
	85	printf "\n\n +++ palmbuild killed \n\n"
	86	exit 1
	87	else
[2566]	88	if [[ $silent = false ]]
	89	then
	90	printf "\n\n *** palmbuild finished \n\n"
	91	fi
[2380]	92	exit 0
[2489]	93	fi
	94	' exit
[2380]	95
	96
	97	# IN CASE OF TERMINAL-BREAK:
	98	trap 'printf "\n\n +++ palmbuild killed by \"^C\" \n\n"
[2506]	99	rm ${source_path}/${host_configuration}_last_make_protocol
[2380]	100	exit
	101	' 2
	102
	103
	104
	105	# READ SHELLSCRIPT-OPTIONS
[2506]	106	while getopts :d:h:m:s:S:uvV option
[2380]	107	do
	108	case $option in
	109	(d) fname=$OPTARG;;
[2506]	110	(h) host_configuration=$OPTARG;;
[2380]	111	(m) makefile=$OPTARG;;
	112	(s) suf=$OPTARG;;
	113	(S) source_list="$OPTARG";;
	114	(v) silent=true;;
[2506]	115	(V) use_existing_sources_folder=true;;
[2380]	116	(\?) printf "\n +++ unknown option $OPTARG \n";
	117	locat=parameter; exit;;
	118	esac
	119	done
	120
	121
[2506]	122	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
	123	config_file=.palm.config.$host_configuration
	124	sources_for_run_catalog=SOURCES_FOR_RUN_${host_configuration}_$fname
[2380]	125
	126
	127	# CHECK, IF CONFIGURATION-FILE EXISTS
	128	if [[ ! -f $config_file ]]
	129	then
	130	printf "\n +++ configuration file: "
	131	printf "\n $config_file"
	132	printf "\n does not exist"
	133	locat=configuration; exit
	134	fi
	135
	136
	137	# ### is this really required?
	138	config_file=$PWD/$config_file
	139
	140
	141	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
	142	while read line
	143	do
	144
	145	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
	146	eval line=\"$line\"
	147
	148
	149	# INTERPRET THE LINE
	150	if [[ "$(echo $line)" = "" ]]
	151	then
	152
	153	# EMPTY LINE, NO ACTION
	154	continue
	155
	156	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
	157	then
	158
	159	# LINE IS A COMMENT LINE
	160	continue
	161
	162	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
	163	then
	164
	165	# LINE DEFINES AN ENVIRONMENT-VARIABLE
	166	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
	167	value=`echo $line \| cut -d" " -s -f2-`
	168
	169	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
	170	# "::" IS REPLACED BY ":".
	171	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	172
	173
	174	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
	175	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
	176	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
	177	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
	178	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
	179	# CONFIGURATION-FILE.
	180	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	181	then
	182	eval export $var="\$value"
	183
	184	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
	185	if [[ $do_trace = true ]]
	186	then
	187	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	188	fi
	189	fi
	190
	191	else
	192
	193	# SKIP ALL OTHER LINES
	194	continue
	195
	196	fi
	197
	198	done < $config_file
	199
	200
[2404]	201	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
	202	if [[ "$base_directory" = "" ]]
	203	then
	204	printf "\n +++ no base directory found in configuration file"
	205	locat=config_file; exit
	206	else
	207	if [[ ! -d $base_directory ]]
	208	then
	209	printf "\n\n +++ base directory \"$base_directory\" "
	210	printf "\n does not exist"
	211	locat=source_path; exit
	212	fi
	213	fi
	214
	215
[2380]	216	# CHECK SOURCE-CODE PATH
	217	if [[ "$source_path" = "" ]]
	218	then
	219	printf "\n +++ no source path found in configuration file"
	220	locat=config_file; exit
	221	else
	222	if [[ ! -d $source_path ]]
	223	then
	224	printf "\n\n +++ source path \"$source_path\" "
	225	printf "\n does not exist"
	226	locat=source_path; exit
	227	fi
	228	fi
	229
	230
	231	# CHECK MAKEFILE
	232	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	233	if [[ ! -f $makefile ]]
	234	then
	235	printf "\n +++ makefile: "
	236	printf "\n $makefile"
	237	printf "\n does not exist"
	238	locat=makefile; exit
	239	fi
	240
	241
	242	# CHECK COMPILERNAME
	243	if [[ "$compiler_name" = "" ]]
	244	then
	245	printf "\n +++ no compiler name found in configuration file"
	246	locat=config_file; exit
	247	fi
	248
	249
	250	# CHECK SERIAL COMPILERNAME
	251	if [[ "$compiler_name_ser" = "" ]]
	252	then
	253	printf "\n +++ no compiler name for serial compilation in configuration file"
	254	locat=config_file; exit
	255	fi
	256
	257
	258	# DETERMINE SSH-KEY TO BE USED
	259	if [[ "$ssh_key" != "" ]]
	260	then
	261	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
	262	fi
	263
	264
	265	#CHECK CPP-OPTIONS
	266	if [[ "$cpp_options" = "" ]]
	267	then
	268	printf "\n +++ WARNING: no cpp-options found in configuration file"
	269	fi
	270
	271
	272	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
	273	if [[ "$remote_ip" != "" ]]
	274	then
	275
	276	if [[ "$remote_username" = "" ]]
	277	then
	278	printf "\n +++ no user name given in configuration file"
	279	locat=config_file; exit
	280	fi
	281
	282	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
	283	# THE $
	284	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
	285	line=`grep %remote_source_path $config_file`
	286	if [[ "$line" != "" ]]
	287	then
	288	remote_source_path=`echo $line \| cut -d" " -s -f2`
	289	else
	290	line=`grep %source_path $config_file`
	291	remote_source_path=`echo $line \| cut -d" " -s -f2`
	292	fi
	293
[2404]	294	line=`grep %base_directory $config_file`
[2506]	295	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${host_configuration}
[2380]	296
	297	else
	298
[2506]	299	make_depository=${base_directory}/MAKE_DEPOSITORY_${host_configuration}
[2380]	300
	301	fi
	302
	303	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
	304	if [[ $silent = false ]]
	305	then
[2566]	306	calltime=$(date)
	307	printf "\n"
	308	printf "#------------------------------------------------------------------------# \n"
	309	printf "\| %-40s%30s \| \n" "$version" "$calltime"
	310	printf "\| \| \n"
	311	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
	312	column2=$(echo $config_file \| cut -c1-57 )
	313	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
	314	line=$(echo "$config_file" \| cut -c58-)
	315	while [[ "$line" != "" ]]
[2380]	316	do
[2566]	317	column1=""
	318	column2=$(echo $line \| cut -c1-57 )
	319	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	320	line=$(echo "$line" \| cut -c58-)
[2380]	321	done
[2566]	322	column2=$(echo $makefile \| cut -c1-57 )
	323	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
	324	line=$(echo "$makefile" \| cut -c58-)
	325	while [[ "$line" != "" ]]
	326	do
	327	column1=""
	328	column2=$(echo $line \| cut -c1-57 )
	329	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	330	line=$(echo "$line" \| cut -c58-)
	331	done
	332	column2=$(echo $source_path \| cut -c1-57 )
	333	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
	334	line=$(echo "$source_path" \| cut -c58-)
	335	while [[ "$line" != "" ]]
	336	do
	337	column1=""
	338	column2=$(echo $line \| cut -c1-57 )
	339	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
	340	line=$(echo "$line" \| cut -c58-)
	341	done
	342	printf "\| \| \n"
	343
[2380]	344	if [[ "$remote_ip" != "" ]]
	345	then
[2506]	346	column2="$host_configuration"
[2566]	347	printf "\| %-20s%-50s \| \n" "host configuration:" "$column2"
[2404]	348	column2=$(echo "$make_depository" \| cut -c1-50 )
[2380]	349	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
	350	else
[2506]	351	column2="$host_configuration"
[2420]	352	printf "\| %-20s%-50s \| \n" "host identifier:" "$column2"
[2404]	353	column2=$(echo "$make_depository" \| cut -c1-50 )
[2380]	354	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
	355	fi
[2404]	356	line=$(echo "$make_depository" \| cut -c51-)
	357	while [[ "$line" != "" ]]
	358	do
	359	column1=""
	360	column2=$(echo "$line" \| cut -c1-50 )
	361	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	362	line=$(echo "$line" \| cut -c51-)
	363	done
[2566]	364
[2380]	365	if [[ "$remote_ip" != "" ]]
	366	then
	367	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
	368	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
	369	else
	370	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
	371	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
	372	fi
[2566]	373
[2380]	374	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
	375	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
[2566]	376
[2380]	377	if [[ "$make_options" != "" ]]
	378	then
	379	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
	380	fi
	381	column2=$(echo "$cpp_options" \| cut -c1-50 )
	382	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
	383	line=$(echo "$cpp_options" \| cut -c51-)
	384	while [[ "$line" != "" ]]
	385	do
	386	column1=""
	387	column2=$(echo "$line" \| cut -c1-50 )
	388	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	389	line=$(echo "$line" \| cut -c51-)
	390	done
	391	column2=$(echo "$compiler_options" \| cut -c1-50 )
	392	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
	393	line=$(echo "$compiler_options" \| cut -c51-)
	394	while [[ "$line" != "" ]]
	395	do
	396	column1=""
	397	column2=$(echo "$line" \| cut -c1-50 )
	398	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	399	line=$(echo "$line" \| cut -c51-)
	400	done
[2388]	401	column2=$(echo "$linker_options" \| cut -c1-50 )
	402	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
	403	line=$(echo "$linker_options" \| cut -c51-)
[2380]	404	while [[ "$line" != "" ]]
	405	do
	406	column1=""
	407	column2=$(echo "$line" \| cut -c1-50 )
	408	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	409	line=$(echo "$line" \| cut -c51-)
	410	done
	411	if [[ "$login_init_cmd" != "" ]]
	412	then
	413	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
	414	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
	415	line=$(echo "$login_init_cmd" \| cut -c51-)
	416	while [[ "$line" != "" ]]
	417	do
	418	column1=""
	419	column2=$(echo "$line" \| cut -c1-50 )
	420	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	421	line=$(echo "$line" \| cut -c51-)
	422	done
	423	fi
	424	if [[ "$module_commands" != "" ]]
	425	then
	426	column2=$(echo "$module_commands" \| cut -c1-50 )
	427	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
	428	line=$(echo "$module_commands" \| cut -c51-)
	429	while [[ "$line" != "" ]]
	430	do
	431	column1=""
	432	column2=$(echo "$line" \| cut -c1-50 )
	433	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
	434	line=$(echo "$line" \| cut -c51-)
	435	done
	436	fi
	437	printf "#------------------------------------------------------------------------# \n"
	438
[2566]	439	answer=dummy
	440	printf "\n"
	441	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
	442	do
	443	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
	444	read answer
	445	done
	446	if [[ $answer = a \|\| $answer = A ]]
[2380]	447	then
[2566]	448	locat=user_abort; exit
[2380]	449	fi
[2566]	450	if [[ $answer = c \|\| $answer = C ]]
	451	then
	452	silent=true
	453	fi
	454	fi
[2380]	455
	456
[2566]	457	# TAR THE SOURCES AND MAKEFILES
	458	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
	459	# THEM TOO
	460	if [[ $silent = false ]]
	461	then
	462	printf "\n\n *** tar of makefile and source files in"
	463	printf "\n $source_path\n"
	464	fi
	465	cd $source_path
	466	cp -p ../UTIL/combine_plot_fields.f90 .
	467	cp -p ../UTIL/compare_palm_logs.f90 .
	468	cp -p ../UTIL/Makefile_utilities .
	469	tar -cf ${program_name}_sources.tar Makefile* *.$suf
	470	rm combine_plot_fields.f90 compare_palm_logs.f90 Makefile_utilities
	471
	472
	473	# MAKE ON REMOTE HOST
	474	if [[ "$remote_ip" != "" ]]
	475	then
	476
	477	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
	478	if [[ "$fname" = "" ]]
[2380]	479	then
	480
[2566]	481	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
	482	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
	483	if [[ $silent = false ]]
[2380]	484	then
[2566]	485	echo " "
[2404]	486	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
	487	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	488	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
[2566]	489	else
	490	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	491	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
	492	fi
[2380]	493
	494
	495
[2566]	496
	497	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
	498	if [[ $silent = false ]]
	499	then
[2380]	500	echo " *** untar previous update on remote host, if existing"
[2566]	501	fi
	502	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	503
	504
[2566]	505	# UNTAR CURRENT SOURCES ON REMOTE HOST
	506	if [[ $silent = false ]]
	507	then
[2380]	508	echo " *** untar current sources on remote host"
[2566]	509	fi
	510	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	511
	512
[2566]	513	# CREATE INIT AND MODULE COAMMNDS
	514	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
	515	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
[2380]	516
	517
[2566]	518	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
	519	if [[ $silent = false ]]
	520	then
[2380]	521	echo " "
	522	echo " *** creating utilities on remote host"
[2566]	523	fi
	524	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	525	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	526
[2566]	527	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	528	then
	529	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
	530	printf "\n for host configuration \"$host_configuration\" "
	531	if [[ $silent = false ]]
[2380]	532	then
[2566]	533	answer=dummy
	534	printf "\n"
	535	while [[ "$answer" != c && "$answer" != k ]]
	536	do
	537	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	538	read answer
	539	if [[ "$answer" = l ]]
[2380]	540	then
[2566]	541	more ${host_configuration}_last_make_protocol
[2380]	542	fi
[2566]	543	done
	544	if [[ $answer = k ]]
	545	then
[2487]	546	locat=user_abort; exit
[2380]	547	fi
[2566]	548	else
	549	# ABORT ANYWAY
	550	locat=user_abort; exit
[2380]	551	fi
[2566]	552	fi
[2380]	553
	554
[2566]	555	# NOW COMPILE THE PALM CODE
	556	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
	557	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
	558	# MAY E.G. MISS THE COMPILER-PATHS)
	559	if [[ $silent = false ]]
	560	then
[2380]	561	echo " "
	562	echo " *** compile PALM sources on remote host"
[2566]	563	fi
	564	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	565	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	566
[2566]	567	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	568	then
	569	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	570	if [[ $silent = false ]]
[2380]	571	then
[2566]	572	answer=dummy
	573	printf "\n"
	574	while [[ "$answer" != c && "$answer" != k ]]
	575	do
	576	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	577	read answer
	578	if [[ "$answer" = l ]]
[2380]	579	then
[2566]	580	more ${host_configuration}_last_make_protocol
[2380]	581	fi
[2566]	582	done
	583	if [[ $answer = k ]]
	584	then
[2487]	585	locat=user_abort; exit
[2380]	586	fi
[2566]	587	else
	588	# ABORT ANYWAY
	589	locat=user_abort; exit
[2380]	590	fi
[2566]	591	fi
[2380]	592
[2566]	593	# TAR UPDATED VERSION ON THE REMOTE HOST
	594	if [[ $silent = false ]]
	595	then
[2380]	596	printf "\n *** tar update on remote host ..."
[2566]	597	fi
	598	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	599
	600
[2566]	601	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
	602	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
	603	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
	604	elif [[ "$fname" != "" ]]
	605	then
	606
	607	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
	608	# AND ASK, IF THEY SHALL BE USED
	609	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${host_configuration}_last_make_protocol
	610	if [[ $(grep -c "sources for run found" ${host_configuration}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
[2380]	611	then
[2566]	612	printf "\a\n *** compiled sources for run \"$fname\" found on remote host in folder"
	613	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
	614	printf "\n will be used!"
	615	exit
	616	fi
[2380]	617
[2566]	618	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
	619	if [[ $silent = false ]]
	620	then
[2506]	621	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on remote host to $sources_for_run_catalog \n"
[2566]	622	fi
	623	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2380]	624
	625
[2566]	626	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
	627	if [[ $silent = false ]]
	628	then
[2506]	629	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
	630	printf "\n to $sources_for_run_catalog on remote host \n"
[2566]	631	fi
	632	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
[2380]	633
	634
[2566]	635	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
	636	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
	637	then
	638
	639	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
	640	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
	641	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
	642	if [[ $silent = false ]]
[2380]	643	then
	644	echo " *** execute \"make\" on remote host"
[2566]	645	fi
	646	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	647
[2566]	648	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
	649	then
	650	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	651	if [[ $silent = false ]]
[2380]	652	then
[2566]	653	answer=dummy
	654	printf "\n"
	655	while [[ "$answer" != c && "$answer" != k ]]
	656	do
	657	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	658	read answer
	659	if [[ "$answer" = l ]]
[2380]	660	then
[2566]	661	more ${host_configuration}_last_make_protocol
[2380]	662	fi
[2566]	663	done
	664	if [[ $answer = k ]]
	665	then
[2506]	666	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
[2487]	667	locat=user_abort; exit
[2380]	668	fi
[2566]	669	else
	670	# ABORT ANYWAY
	671	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
	672	locat=user_abort; exit
[2380]	673	fi
[2566]	674	fi
[2380]	675
[2566]	676	else
[2380]	677
[2566]	678	echo " *** nothing to compile for this run"
[2380]	679
	680	fi
	681
[2566]	682	fi
[2380]	683
[2566]	684	rm -rf ${source_path}/${host_configuration}_last_make_protocol
[2380]	685
	686
[2566]	687	# MAKE ON LOCAL HOST
	688	else
[2380]	689
[2566]	690
	691	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
	692	# LOCAL HOST
	693	if [[ "$fname" = "" ]]
	694	then
	695
	696	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
	697	if [[ "$login_init_cmd" != "" ]]
[2380]	698	then
[2566]	699	$login_init_cmd
	700	fi
[2380]	701
[2566]	702	if [[ "$module_commands" != "" ]]
	703	then
	704	$module_commands
	705	fi
[2380]	706
	707
[2566]	708	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
	709	eval make_depository=$make_depository
	710	if [[ ! -d $make_depository ]]
	711	then
	712	if mkdir -p $make_depository
[2380]	713	then
[2566]	714	if [[ $silent = false ]]
[2380]	715	then
	716	printf "\n\n *** directory for local make depository:"
[2404]	717	printf "\n $make_depository"
[2380]	718	printf "\n was created\n"
	719	fi
[2566]	720	else
	721	printf "\n +++ directory for local make depository:"
	722	printf "\n $make_depository"
	723	printf "\n cannot be created"
	724	locat=local_depository; exit
[2380]	725	fi
[2566]	726	fi
[2380]	727
[2566]	728	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
	729	if [[ $silent = false ]]
	730	then
[2380]	731	echo " "
	732	echo " *** untar current source sources on local host in"
[2404]	733	echo " $make_depository"
[2566]	734	fi
	735	cd $make_depository
	736	cp $source_path/${program_name}_sources.tar .
	737	tar xf ${program_name}_sources.tar
[2380]	738
	739
[2566]	740	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
	741	if [[ $silent = false ]]
	742	then
[2380]	743	echo " "
	744	echo " *** creating utilities on local host"
[2566]	745	fi
	746	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
[2380]	747
	748
[2566]	749	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
	750	if [[ $silent = false ]]
	751	then
[2380]	752	echo " "
	753	echo " *** compile PALM sources on local host"
[2566]	754	fi
[2380]	755
[2566]	756	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${host_configuration}_last_make_protocol
[2380]	757
[2566]	758	if [[ $? != 0 ]]
	759	then
	760	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	761	if [[ $silent = false ]]
[2380]	762	then
[2566]	763	answer=dummy
	764	printf "\n"
	765	while [[ "$answer" != c && "$answer" != k ]]
	766	do
	767	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
	768	read answer
	769	if [[ "$answer" = l ]]
[2380]	770	then
[2566]	771	more ${host_configuration}_last_make_protocol
[2380]	772	fi
[2566]	773	done
	774	if [[ $answer = k ]]
	775	then
[2487]	776	locat=user_abort; exit
[2380]	777	fi
[2566]	778	else
	779	# ABORT ANYWAY
	780	locat=user_abort; exit
[2380]	781	fi
[2566]	782	fi
[2380]	783
	784
[2566]	785	# TAR NEW VERSION ON LOCAL HOST
	786	if [[ $silent = false ]]
	787	then
[2380]	788	printf "\n *** tar update on local host ..."
[2566]	789	fi
	790	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
[2380]	791
[2566]	792	else
[2380]	793
[2566]	794	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
	795	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
	796	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
[2380]	797
[2566]	798	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
	799	# AND ASK, IF THEY SHALL BE USED
	800	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
	801	then
	802	printf "\a\n *** compiled sources for run \"$fname\" found on local host in folder"
	803	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
	804	printf "\n will be used!"
	805	exit
	806	fi
[2489]	807
[2566]	808	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
	809	if [[ ! -d ${make_depository} ]]
	810	then
	811	printf "\n +++ directory for local make depository:"
	812	printf "\n $make_depository"
	813	printf "\n not found. Please run \"palmbuild -h $host_configuration\" "
	814	locat=make_depository; exit
	815	fi
[2380]	816
	817
[2566]	818	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
	819	if [[ $silent = false ]]
	820	then
[2506]	821	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on local host to "
	822	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
[2566]	823	fi
	824	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
	825	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
	826	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
	827	cd $fast_io_catalog/${sources_for_run_catalog}
	828	tar xf ${program_name}_current_version.tar
[2380]	829
	830
[2566]	831	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
	832	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
	833	if [[ $silent = false ]]
	834	then
[2506]	835	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
	836	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
[2566]	837	fi
	838	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
[2380]	839
	840
[2566]	841	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
	842	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
	843	then
	844
	845	if [[ $silent = false ]]
[2380]	846	then
	847	echo " *** execute \"make\" on local host"
[2566]	848	fi
	849	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
	850	[[ "$module_commands" != "" ]] && $module_commands
[2380]	851
[2566]	852	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
[2380]	853
[2566]	854	if [[ $? != 0 ]]
	855	then
	856
	857	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
	858	if [[ $silent = false ]]
[2380]	859	then
[2566]	860	answer=dummy
	861	printf "\n"
	862	while [[ "$answer" != c && "$answer" != k ]]
	863	do
	864	printf " >>> continue / kill palmbuild (c/k) ? "
	865	read answer
	866	done
	867	if [[ $answer = k ]]
[2380]	868	then
[2506]	869	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
[2487]	870	locat=user_abort; exit
[2380]	871	fi
[2566]	872	else
	873	# ABORT ANYWAY
	874	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
	875	locat=user_abort; exit
[2380]	876	fi
[2566]	877	fi
[2380]	878
[2566]	879	else
[2380]	880
[2566]	881	echo " *** nothing to compile for this run"
[2380]	882
[2566]	883	fi
[2380]	884
	885	fi
[2566]	886	fi

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