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mrun_new @ 22

Last change on this file since 22 was 22, checked in by raasch, 17 years ago
compilation of utilities with mbuild, mrun_path replaced by PALM_BIN, no statistik-log
File size: 146.9 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 28/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109	# 14/02/07 - Siggi - dvrp support for neck added
110	# 28/02/07 - Siggi - empty lines in configuration file are accepted
111	# mrun_path replaced by PALM_BIN
112
113
114
115
116	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
117
118	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
119	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
120	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
121
122	AddFilenames=""
123	additional_conditions=""
124	add_source_path=""
125	afname=""
126	archive_save=true
127	archive_system=none
128	compiler_name=""
129	cond1=""
130	cond2=""
131	config_file=.mrun.config
132	cpp_opts=""
133	cpumax=0
134	cpurest=0
135	delete_temporary_catalog=true
136	do_batch=false
137	do_compile=true
138	do_remote=false
139	do_stagein=true
140	do_stageout=true
141	do_trace=false
142	email_notification=""
143	exclude=""
144	executable=""
145	execution_error=false
146	filetransfer_protocol=""
147	fname=test
148	fromhost=""
149	host=""
150	host_file=""
151	hp=""
152	ignore_archive_error=false
153	input_list=""
154	interpreted_config_file=""
155	job_on_file=""
156	keep_data_from_previous_run=false
157	localhost_realname=$(hostname)
158	local_compile=false
159	locat=normal
160	mainprog=""
161	makefile=""
162	mc=$0
163	while [[ $(echo $mc \| grep -c "/") != 0 ]]
164	do
165	mc=`echo $mc \| cut -f2- -d"/"`
166	done
167	module_files=""
168	MODULE_OPTIONS=""
169	mrun_script_name=$mc
170	netcdf_support=false
171	node_usage=default
172	numprocs=""
173	OOPT=""
174	openmp=false
175	output_list=""
176	package_list=""
177	punkte="..........................................................."
178	queue=none
179	read_from_config=""
180	restart_run=false
181	# return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
182	return_addres=130.75.105.2
183	if [[ $return_addres = 130.75.105.158 ]]
184	then
185	return_addres=172.20.25.41
186	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
187	fi
188	# if [[ $return_addres = 210.117.65.1 ]]
189	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
190	# then
191	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
192	# fi
193	return_password=""
194	return_username=$LOGNAME
195	remotecall=false
196	remote_username=""
197	run_mode=""
198	scirocco=false
199	store_on_archive_system=true
200	striche=" ----------------------------------------------------------------------------"
201	silent=false
202	source_list=""
203	source_path=SOURCE
204	tasks_per_node=""
205	threads_per_task=1
206	tmpcreate=false
207	tmp_data_catalog=""
208	transfer_problems=false
209	usern=$LOGNAME
210	use_makefile=""
211	working_directory=`pwd`
212	TOPT=""
213	XOPT=""
214	zeit=$( date \| cut -c 12-19 )
215
216	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
217	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
218
219	typeset -R40 calltime
220	typeset -L20 spalte1
221	typeset -L40 spalte2
222	typeset -L60 spalte3
223	typeset -L35 string1=`date`
224	typeset -L12 string2=$usern
225	typeset -L12 string3=$localhost_realname
226	typeset -L12 string4
227	typeset -L12 string5
228	typeset -L20 version="MRUN 1.8"
229
230
231
232	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
233	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
234
235	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
236	# EXPORTIERT WERDEN
237	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
238	export input_list memory numprocs output_list queue run_mode
239
240
241
242	# FEHLERBEHANDLUNG
243	# BEI EXIT:
244	trap 'if [[ $locat != localhost ]]
245	then
246	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
247	# then
248	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
249	#MRUN-calls on $localhost
250	#
251	#date and time user localhost remotehost termination mrun-command
252	#--------------------------------------------------------------------------------------------------------------------
253	#%STATEND%
254	# chmod 666 ${mrun_path}/statistik/mrun_statistik
255	# fi
256	#
257	# # EINTRAG IN DIE STATISTIK-DATEI
258	# string4=$host
259	# string5=$locat
260	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
261	# then
262	# if [[ $do_batch = true ]]
263	# then
264	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
265	# else
266	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
267	# fi
268	# fi
269	continue
270	fi
271
272	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
273	then
274
275	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
276	(( i = 0 ))
277	while (( i < iec ))
278	do
279	(( i = i + 1 ))
280	printf "\n *** Execution of ERROR-command:\n"
281	printf " >>> ${err_command[$i]}\n"
282	eval ${err_command[$i]}
283	done
284	if [[ -n $interpreted_config_file ]] then
285	rm -rf $interpreted_config_file
286	fi
287	if [[ $tmpcreate = true ]]
288	then
289	printf "\n *** Contents of \"$TEMPDIR\":\n"
290	ls -al; cd
291	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
292	fi
293	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
294	then
295	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
296	fi
297	printf "\n\n+++ MRUN killed \n\n"
298	elif [[ $locat != control_c ]]
299	then
300	printf "\n\n --> all actions finished\n\n"
301	printf " Bye, bye $usern !!\n\n"
302	fi' exit
303
304
305	# BEI TERMINAL-BREAK:
306	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
307	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
308	then
309	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
310	fi
311	printf "\n+++ MRUN killed by \"^C\" \n\n"
312	locat=control_c
313	exit
314	' 2
315
316
317	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
318	# BEEN SET
319	if [[ "$PALM_BIN" = "" ]]
320	then
321	printf "\n +++ environment variable PALM_BIN has not been set"
322	printf "\n please set it to the directory where the PALM scripts are located"
323	locat=palm_bin; exit
324	fi
325
326
327	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
328	case $localhost_realname in
329	(atmos) localhost=lcide;;
330	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
331	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
332	(cs*) localhost=nech; archive_system=ut;;
333	(gate\|n-sx) PATH=$MRUN_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
334	(ground.yonsei.ac.kr) localhost=decalpha;;
335	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
336	(gfdl5) localhost=ibmy;;
337	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
338	(nobel*) localhost=ibms;;
339	(sun1\|sun2) localhost=unics;;
340	(tgg*) localhost=lctit;;
341	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
342	locat=localhost; exit;;
343	esac
344
345	[[ $localhost_realname = scirocco ]] && scirocco=true
346
347
348
349	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
350	# FUER FOLGEJOBS BENOETIGT WIRD
351	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
352	do
353	case $option in
354	(a) afname=$OPTARG;;
355	(A) store_on_archive_system=false; mc="$mc -A";;
356	(b) do_batch=true; mc="$mc -b";;
357	(B) delete_temporary_catalog=false; mc="$mc -B";;
358	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
359	(C) restart_run=true; mc="$mc -C";;
360	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
361	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
362	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
363	(F) job_on_file="-D"; mc="$mc -F";;
364	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
365	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
366	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
367	(I) ignore_archive_error=true; mc="$mc -I";;
368	(k) keep_data_from_previous_run=true; mc="$mc -k";;
369	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
370	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
371	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
372	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
373	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
374	(O) use_openmp=true; mc="$mc -O";;
375	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
376	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
377	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
378	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
379	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
380	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
381	(S) read_from_config=false; mc="$mc -S";;
382	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
383	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
384	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
385	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
386	(v) silent=true; mc="$mc -v";;
387	(x) do_trace=true;set -x; mc="$mc -x";;
388	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
389	(\?) printf "\n +++ unknown option $OPTARG \n"
390	printf "\n --> type \"$0 ?\" for available options \n"
391	locat=parameter;exit;;
392	esac
393	done
394
395
396	# EVTL. POSITIONSPARAMETER EINLESEN
397	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
398	shift OPTIND-1
399
400
401	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
402	if [[ "$1" = "?" ]]
403	then
404	(printf "\n *** mrun can be called as follows:\n"
405	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
406	printf "\n Description of available options:\n"
407	printf "\n Option Description Default-Value"
408	printf "\n -a base name of input files equiv. -d"
409	printf "\n -A no archiving when using file-attribute fl"
410	printf "\n -b batch-job on local machine ---"
411	printf "\n -B do not delete temporary directory at end ---"
412	printf "\n -c configuration file .mrun.config"
413	printf "\n -d base name of files attached to program test"
414	printf "\n -D preprocessor(cpp)-directives \"\" "
415	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
416	printf "\n -F create remote job file only ---"
417	printf "\n -h execution host $localhost_realname"
418	printf "\n -i INPUT control list \"\" "
419	printf "\n -I archiving errors of previous batch-jobs"
420	printf "\n will be ignored"
421	printf "\n -k keep data from previous run"
422	printf "\n -K additional conditions for controling"
423	printf "\n usage of conditional code and"
424	printf "\n env-variables in configuration file \"\" "
425	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
426	printf "\n -M Makefile name Makefile"
427	printf "\n -n node usage (shared/not_shared) depending on -h"
428	printf "\n -o OUTPUT control list \"\" "
429	printf "\n -O use OpenMP ---"
430	printf "\n -p software package list \"\" "
431	printf "\n -q queue \"$queue\" "
432	printf "\n -r run control list (combines -i -o) \"\" "
433	printf "\n -s filenames of routines to be compiled \"\" "
434	printf "\n must end with .f, .f90, .F, or .c !"
435	printf "\n use \"..\" for more than one file and wildcards"
436	printf "\n -s TEST compiles all files with w-permit"
437	printf "\n -S config file interpreted by shellscript ---"
438	printf "\n -t allowed cpu-time in seconds (batch) 0"
439	printf "\n -T tasks per node depending on -h"
440	printf "\n -u username on remote machine \"\" "
441	printf "\n -v no prompt for confirmation ---"
442	printf "\n -x tracing of mrun for debug purposes ---"
443	printf "\n -X # of processors (on parallel machines) 1"
444	printf "\n "
445	printf "\n Possible values of positional parameter <modus>:"
446	printf "\n \"?\" - this outline \n\n") \| more
447	exit
448	elif [[ "$1" != "" ]]
449	then
450	printf "\n +++ positional parameter $1 unknown \n"
451	locat=parameter; exit
452	fi
453
454
455
456	# KURZE STARTMELDUNG
457	printf "\n*** $version "
458	printf "\n will be executed. Please wait ..."
459
460
461	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
462	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
463	[[ "$afname" = "" ]] && afname=$fname
464
465
466	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
467	if [[ "$run_mode" != "" ]]
468	then
469	input_list="$input_list $run_mode"
470	output_list="$output_list $run_mode"
471	fi
472
473
474	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
475	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
476	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
477	# STARTET)
478	if [[ "$fromhost" = "" ]]
479	then
480	fromhost=$localhost
481	fi
482
483
484	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
485	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
486	then
487	source_list=TEST
488	local_compile=true
489	host=$localhost
490	fi
491
492
493	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
494	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
495	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
496	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
497	if [[ -n $host && "$host" != $localhost ]]
498	then
499	do_batch=true
500	do_remote=true
501	case $host in
502	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
503	(*) printf "\n"
504	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
505	printf "\n or NQS not available on execution host!"
506	locat=nqs; (( iec = 0 )); exit;;
507	esac
508	else
509	host=$localhost
510	fi
511
512
513	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
514	if [[ -n $additional_conditions ]]
515	then
516	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
517	# cond1=`echo $additional_conditions \| cut -d" " -f1`
518	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
519	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
520	if [[ -n $dummy ]]
521	then
522	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
523	locat=options; exit
524	fi
525	fi
526
527
528	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
529	# ARCHIVIERUNG FEHLGESCHLAGEN IST
530	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
531	then
532	if [[ $ignore_archive_error = false ]]
533	then
534	printf "\n +++ data archiving of previous run failed"
535	printf "\n see directory \~/job_queue on remote machine"
536	locat=archive; exit
537	else
538	printf "\n +++ warning: data archiving in a previous run failed"
539	printf "\n MRUN continues, trying to get backup copy"
540	fi
541	fi
542
543
544	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
545	if [[ ! -f $config_file ]]
546	then
547	printf "\n\n +++ configuration file: "
548	printf "\n $config_file"
549	printf "\n does not exist"
550	locat=connect; exit
551	fi
552
553
554
555	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
556	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
557	if [[ "$read_from_config" = false ]]
558	then
559
560	[[ $silent = false ]] && printf "\n Reading the configuration file... "
561	while read zeile
562	do
563	[[ $silent = false ]] && printf "."
564
565
566	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
567	# ERSETZEN
568	eval zeile=\"$zeile\"
569
570
571	# INTERPRETATION DER ZEILE
572	if [[ "$(echo $zeile)" = "" ]]
573	then
574	# LEERZEILE, KEINE AKTION
575	continue
576
577	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
578	then
579
580	# ZEILE IST KOMMENTARZEILE
581	true
582
583	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
584	then
585
586	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
587	zeile=$(echo $zeile \| cut -c2-)
588	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
589	# var=`echo $zeile \| cut -d" " -f1`
590	# value=`echo $zeile \| cut -d" " -s -f2`
591	# for_host=`echo $zeile \| cut -d" " -s -f3`
592	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
593	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
594
595	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
596	then
597
598	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
599	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
600	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
601
602
603	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
604	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
605	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
606	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
607	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
608	# KONFIGURATIONSDATEI
609	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
610	then
611	eval $var=\$value
612
613	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
614	if [[ $do_trace = true ]]
615	then
616	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
617	fi
618	fi
619
620	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
621	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
622	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
623	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
624	if [[ $var = host ]]
625	then
626	if [[ -n $host && "$host" != $localhost ]]
627	then
628	do_batch=true
629	do_remote=true
630	case $host in
631	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
632	(*) printf "\n +++ no queueing system available on execution host \"$host\""
633	locat=nqs; exit;;
634	esac
635	else
636	host=$localhost
637	fi
638	fi
639
640	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
641	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
642	# DEN PROGRAMMEN BENOETIGT WERDEN
643	export $var
644	fi
645
646
647
648
649	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
650	then
651
652	# ZEILE DEFINIERT ERROR-KOMMANDO
653	(( iec = iec + 1 ))
654	zeile=$(echo $zeile \| cut -c4-)
655	err_command[$iec]="$zeile"
656
657	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
658	then
659
660	# ZEILE DEFINIERT INPUT-KOMMANDO
661	(( iic = iic + 1 ))
662	zeile=$(echo $zeile \| cut -c4-)
663	in_command[$iic]="$zeile"
664
665	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
666	then
667
668	# ZEILE DEFINIERT OUTPUT-KOMMANDO
669	(( ioc = ioc + 1 ))
670	zeile=$(echo $zeile \| cut -c4-)
671	out_command[$ioc]="$zeile"
672
673	else
674
675	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
676	# s2a: in/out - Feld
677	# s2b: loc - Feld (optional)
678	# s2c: tr/ar - Feld (optional)
679	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
680	# s1=`echo $zeile \| cut -d" " -f1`
681	# s2=`echo $zeile \| cut -d" " -s -f2`
682	s2a=$(echo $s2 \| cut -d":" -f1)
683	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
684	then
685	s2b=""
686	s2c=""
687	else
688	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
689	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
690	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
691	fi
692	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
693	# s3=`echo $zeile \| cut -d" " -f3`
694	# s4=`echo $zeile \| cut -d" " -s -f4`
695	# s5=`echo $zeile \| cut -d" " -s -f5`
696	# s6=`echo $zeile \| cut -d" " -s -f6`
697
698
699	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
700	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
701	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
702	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
703	# HANDEN SEIN MUSS (D.H. s2b = loc)
704	IFSALT="$IFS"; IFS="$IFS:"
705	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
706	then
707	found=false
708	for actual in $input_list
709	do
710	for formal in $s3
711	do
712	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
713	done
714	done
715	if [[ $found = true ]]
716	then
717	(( iin = iin + 1 ))
718	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
719	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
720	extin[$iin]=$s6
721	fi
722	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
723	then
724	found=false
725	for actual in $output_list
726	do
727	for formal in $s3
728	do
729	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
730	done
731	done
732	if [[ $found = true ]]
733	then
734	(( iout = iout + 1 ))
735	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
736	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
737	fi
738	elif [[ "$s2a" != in && "$s2a" != out ]]
739	then
740	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
741	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
742	locat=connect; exit
743	fi
744	IFS="$IFSALT"
745	fi
746	done < $config_file
747
748	else
749
750
751	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
752	[[ $silent = false ]] && printf "..."
753	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
754	export interpreted_config_file=.icf.$RANDOM
755
756	case $localhost_realname in
757	(caurus\|twister) interpret_config.hp;;
758	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
759	(levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
760	(quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
761	(*) interpret_config.x;;
762	esac
763
764
765	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
766	chmod u+x $interpreted_config_file
767	export PATH=$PATH:.
768	. $interpreted_config_file
769	rm $interpreted_config_file
770
771	fi
772
773
774	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
775	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
776	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
777	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
778	if [[ "$SOURCES_COMPLETE" = "" ]]
779	then
780
781	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
782	# VEREINBART WURDE
783	source_path=""
784	line=""
785	grep "%source_path" $config_file > tmp_mrun
786	while read line
787	do
788	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
789	then
790	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
791	then
792	global_source_path=`echo $line \| cut -d" " -f2`
793	fi
794	fi
795	done < tmp_mrun
796
797	line=""
798	found=false
799	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
800	while read line
801	do
802	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
803	then
804	if [[ $found = true ]]
805	then
806	printf "\n\n +++ more than one source path found in configuration file"
807	printf "\n for local host \"$localhost\" "
808	locat=source_path; exit
809	fi
810	source_path=`echo $line \| cut -d" " -f2`
811	found=true
812	fi
813	done < tmp_mrun
814	rm tmp_mrun
815
816	if [[ "$source_path" = "" ]]
817	then
818	if [[ "$global_source_path" != "" ]]
819	then
820	source_path=$global_source_path
821	else
822	printf "\n\n +++ no source path found in configuration file"
823	printf "\n for local host \"$localhost\" "
824	locat=source_path; exit
825	fi
826	fi
827	eval source_path=$source_path
828
829	if [[ ! -d $source_path ]]
830	then
831	printf "\n\n +++ source path \"$source_path\" on local host"
832	printf "\n \"$localhost\" does not exist"
833	locat=source_path; exit
834	fi
835
836	fi
837
838
839
840	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
841	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
842	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
843	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
844	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
845	if [[ -n $host && "$host" != $localhost ]]
846	then
847	do_batch=true
848	do_remote=true
849	case $host in
850	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
851	(*) printf "\n"
852	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
853	printf "\n or no queueing system available on execution host!"
854	locat=nqs; (( iec = 0 )); exit;;
855	esac
856	else
857	host=$localhost
858	fi
859
860
861	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
862	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
863	then
864
865	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
866	if [[ ! -n $numprocs ]]
867	then
868	printf "\n"
869	printf "\n +++ option \"-K parallel\" requires additional specification"
870	printf "\n of the number of processors to be used by"
871	printf "\n mrun-option \"-X\" or by environment-variable"
872	printf "\n \"numprocs\" in the configuration file"
873	locat=numprocs; (( iec = 0 )); exit
874	fi
875
876	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
877	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
878	# GESAMTPROZESSORANZAHL IST
879	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
880	then
881	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
882	(( ival = $tasks_per_node ))
883	(( pes = numprocs ))
884	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
885	# then
886	# (( pes = pes - 1 ))
887	# fi
888	(( ii = pes / ival ))
889	if (( pes - ii * ival > 0 ))
890	then
891	printf "\n"
892	printf "\n +++ tasks per node (option \"-T\") must be an integral"
893	printf "\n divisor of the total number of processors (option \"-X\")"
894	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
895	locat=tasks_per_node; (( iec = 0 )); exit
896	fi
897	fi
898
899	# IBMY HAT NUR EINEN KNOTEN
900	if [[ $host = ibmy ]]
901	then
902	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
903	then
904	printf "\n"
905	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
906	printf "\n total number of processors (option \"-X\")"
907	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
908	locat=tasks_per_node; (( iec = 0 )); exit
909	fi
910	fi
911
912	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
913	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
914	if [[ $use_openmp = true ]]
915	then
916	threads_per_task=$tasks_per_node
917	tasks_per_node=1
918	fi
919	OOPT="-O $threads_per_task"
920	TOPT="-T $tasks_per_node"
921
922	# GESAMTZAHL DER KNOTEN BESTIMMEN
923	if [[ "$tasks_per_node" != "" ]]
924	then
925	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
926	fi
927
928	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
929	# SETZEN
930	if [[ $node_usage = default ]]
931	then
932	if [[ $host = ibms ]]
933	then
934	node_usage=shared
935	else
936	node_usage=not_shared
937	fi
938	fi
939	if [[ $node_usage != shared && $node_usage != not_shared ]]
940	then
941	printf "\n"
942	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
943	printf "\n \"shared\" or \"not_shared\""
944	locat=tasks_per_node; (( iec = 0 )); exit
945	fi
946
947	fi
948
949	# PRUEFEN, OB HOSTFILE EXISTIERT
950	if [[ -n $hostfile ]]
951	then
952	if [[ ! -f $hostfile ]]
953	then
954	printf "\n"
955	printf "\n +++ hostfile \"$hostfile\" does not exist"
956	locat=hostfile; exit
957	fi
958	fi
959
960	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
961	if [[ $host = ibmy && $do_remote = false ]]
962	then
963	if [[ ! -f $HOME/.rhosts ]]
964	then
965	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
966	printf "\n\n *** file:"
967	printf "\n $HOME/.rhosts"
968	printf "\n was created\n"
969	fi
970	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
971	then
972	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
973	printf "\n\n *** file:"
974	printf "\n $HOME/.rhosts"
975	printf "\n was extended by the name of the current host\n"
976	fi
977	fi
978
979	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
980	if [[ "$filetransfer_protocol" = "" ]]
981	then
982	case $host in
983	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
984	(*) filetransfer_protocol=ftp;;
985	esac
986	fi
987
988	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
989	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
990	then
991	printf "\n"
992	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
993	printf "\n only \"ftp\" or \"scp\" are allowed"
994	locat=options; exit
995	fi
996
997
998	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
999	if [[ $queue = none ]]
1000	then
1001	case $host in
1002	(ibmb) if [[ $node_usage = shared ]]
1003	then
1004	queue=cshare
1005	else
1006	queue=csolo
1007	fi;;
1008	(ibmh) if [[ $node_usage = shared ]]
1009	then
1010	queue=cshare
1011	else
1012	queue=csolo
1013	fi;;
1014	(ibmy) queue=parallel;;
1015	(lctit) queue=default;;
1016	(nech) queue=none;;
1017	(neck) queue=P;;
1018	(unics) queue=unics;;
1019	esac
1020	fi
1021
1022
1023	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1024	case $host in
1025	(decalpha) netcdf_support=true
1026	netcdf_path=/usr/local/netcdf-3.5.1;;
1027	(ibmb\|ibmh) netcdf_support=true
1028	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1029	(ibms) netcdf_support=true
1030	netcdf_path=/applic/lib/NETCDF64;;
1031	(ibmy) netcdf_support=true
1032	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1033	(lcmuk) netcdf_support=true
1034	if [[ $scirocco = true ]]
1035	then
1036	netcdf_path=/opt/netcdf/3.6.2-beta4
1037	else
1038	netcdf_path=/muksoft/packages/netcdf/linux
1039	fi;;
1040	(lctit) netcdf_support=true
1041	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1042	(nech) netcdf_support=true
1043	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1044	(neck) netcdf_support=true
1045	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1046	esac
1047
1048
1049	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1050	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1051	# ERMITTELN
1052	(( i = 0 ))
1053	while (( i < iin ))
1054	do
1055	(( i = i + 1 ))
1056	(( maxcycle = 0 ))
1057
1058	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1059	if [[ "${actionin[$i]}" = di ]]
1060	then
1061	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1062	# REM-MASCHINE AUSWERTEN
1063	eval filename=${pathin[$i]}/${endin[$i]}
1064	else
1065	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1066	# REM-MASCHINE AUSWERTEN
1067	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1068	fi
1069
1070	# PRUEFEN AUF VORHANDENSEIN
1071	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1072	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1073	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1074	then
1075	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1076	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1077	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1078	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1079	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1080	if [[ "${transin[$i]}" != "locopt" ]]
1081	then
1082	printf "\n\n +++ INPUT-file: "
1083	if [[ "${extin[$i]}" = "" ]]
1084	then
1085	printf "\n $filename"
1086	else
1087	printf "\n $filename.${extin[$i]}"
1088	fi
1089	printf "\n does not exist\n"
1090	locat=input; exit
1091	else
1092	transin[$i]="unavailable"
1093	fi
1094	else
1095
1096	# ZYKLUSNUMMER FESTSTELLEN
1097	ls -1 -d $filename > filelist 2>/dev/null
1098	ls -1 -d $filename.* >> filelist 2>/dev/null
1099	while read zeile
1100	do
1101	cycle=$(print $zeile \| cut -f2 -d".")
1102	if [[ "$cycle" = "$zeile" ]]
1103	then
1104	(( icycle = 0 ))
1105	elif [[ "$cycle" = "${extin[$i]}" ]]
1106	then
1107	(( icycle = 0 ))
1108	else
1109	(( icycle = $cycle ))
1110	fi
1111	if (( icycle > maxcycle ))
1112	then
1113	(( maxcycle = icycle ))
1114	file_to_be_used=$zeile
1115	fi
1116	done <filelist
1117	rm filelist
1118
1119	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1120	if (( maxcycle > 0 ))
1121	then
1122	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1123	then
1124	filename=${filename}.$maxcycle.${extin[$i]}
1125	else
1126	filename=${filename}.$maxcycle
1127	fi
1128	else
1129	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1130	then
1131	filename=${filename}.${extin[$i]}
1132	fi
1133	fi
1134
1135	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1136	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1137	absnamein[$i]=$filename
1138	if (( maxcycle > 0 ))
1139	then
1140	if [[ "${actionin[$i]}" = di ]]
1141	then
1142	frelin[$i]=${endin[$i]}.$maxcycle
1143	else
1144	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1145	fi
1146	else
1147	if [[ "${actionin[$i]}" = di ]]
1148	then
1149	frelin[$i]=${endin[$i]}
1150	else
1151	frelin[$i]=${afname}${endin[$i]}
1152	fi
1153	fi
1154
1155	fi
1156	done
1157
1158
1159	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1160	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1161	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1162	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1163	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1164	(( i = 0 ))
1165	while (( i < iout ))
1166	do
1167	(( i = i + 1 ))
1168	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1169	then
1170	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1171	then
1172	actionout[$i]=""
1173	elif [[ "${actionout[$i]}" = tra ]]
1174	then
1175	actionout[$i]=a
1176	fi
1177	(( maxcycle = 0 ))
1178	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1179	eval catalogname=${pathout[$i]}
1180	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1181	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1182	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1183	then
1184
1185	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1186	if cat /dev/null > $filename
1187	then
1188	rm $filename
1189	else
1190
1191	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1192	if [[ ! -d $catalogname ]]
1193	then
1194	if mkdir -p $catalogname
1195	then
1196	printf "\n\n *** directory:"
1197	printf "\n $catalogname"
1198	printf "\n was created\n"
1199	else
1200	printf "\n\n +++ OUTPUT-file:"
1201	printf "\n $filename"
1202	printf "\n cannot be created, because directory does not exist"
1203	printf "\n and cannot be created either"
1204	printf "\n"
1205	locat=output ; exit
1206	fi 2>/dev/null
1207	else
1208	printf "\n\n +++ OUTPUT-file:"
1209	printf "\n $filename"
1210	printf "\n cannot be created, although directory exists"
1211	printf "\n"
1212	locat=output ; exit
1213	fi
1214	fi 2>/dev/null
1215	else
1216
1217	# ZYKLUSNUMMER FESTSTELLEN
1218	ls -1 -d $filename > filelist 2>/dev/null
1219	ls -1 -d $filename.* >> filelist 2>/dev/null
1220	while read zeile
1221	do
1222	cycle=$(print $zeile \| cut -f2 -d".")
1223	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1224	then
1225	(( icycle = 1 ))
1226	else
1227	(( icycle = $cycle + 1 ))
1228	fi
1229	if (( icycle > maxcycle ))
1230	then
1231	(( maxcycle = icycle ))
1232	fi
1233	done <filelist
1234	rm filelist
1235	fi
1236
1237	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1238	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1239	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1240	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1241	if [[ "${actionout[$i]}" != a ]]
1242	then
1243	if (( maxcycle > 0 ))
1244	then
1245	filename=${filename}.$maxcycle
1246	if cat /dev/null > $filename
1247	then
1248	rm $filename
1249	else
1250	printf "\n +++ OUTPUT-file:"
1251	printf "\n $filename"
1252	printf "\n cannot be created"
1253	locat=output ; exit
1254	fi
1255	fi
1256	else
1257	(( maxcycle = maxcycle - 1 ))
1258	if (( maxcycle > 0 ))
1259	then
1260	filename=${filename}.$maxcycle
1261	fi
1262	fi
1263
1264	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1265	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1266	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1267	pathout[$i]=$filename
1268	if (( maxcycle > 0 ))
1269	then
1270	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1271	else
1272	frelout[$i]=${fname}${endout[$i]}
1273	fi
1274
1275	fi
1276	done
1277
1278
1279	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1280	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1281	# UEBERSETZT ZU WERDEN)
1282	if [[ "$mainprog" = "" && "$executable" = "" ]]
1283	then
1284	printf "\n +++ neither main program nor executable defined"
1285	locat=source; exit
1286	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1287	then
1288	printf "\n +++ main program as well as executable defined"
1289	locat=source; exit
1290	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1291	then
1292	do_compile=false
1293	fi
1294
1295
1296	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1297	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1298	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1299	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1300	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1301	then
1302
1303	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1304	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1305
1306	if [[ $restart_run != true ]]
1307	then
1308	rm -rf SOURCES_FOR_RUN_$fname
1309	mkdir SOURCES_FOR_RUN_$fname
1310	fi
1311
1312
1313	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1314	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1315	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1316	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1317	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1318	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1319	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1320	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1321	# GESAMMELT
1322	if [[ "$source_list" = WRITE_PERMIT ]]
1323	then
1324
1325	source_list=""
1326	cd $source_path
1327
1328
1329	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1330	Names=$(ls -1 *.f90 2>&1)
1331	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1332	Names=$(ls -1 *.F90 2>&1)
1333	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1334	Names=$(ls -1 *.F 2>&1)
1335	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1336	Names=$(ls -1 *.f 2>&1)
1337	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1338	Names=$(ls -1 *.c 2>&1)
1339	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1340
1341
1342	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1343	for dateiname in $Filenames
1344	do
1345	if [[ -w $dateiname ]]
1346	then
1347	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1348	then
1349	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1350	source_list=$source_list"$dateiname "
1351	fi
1352	fi
1353	done
1354
1355	cd - > /dev/null
1356
1357
1358	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1359	then
1360
1361	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1362	source_list=""
1363	cd $source_path
1364
1365
1366	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1367	if [[ ! -d .svn ]]
1368	then
1369	printf "\n\n +++ source directory"
1370	printf "\n \"$source_path\" "
1371	printf "\n is not under control of \"subversion\"."
1372	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1373	fi
1374
1375
1376	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1377	Filenames=""
1378	svn status \| while read line
1379	do
1380	firstc=`echo $line \| cut -c1`
1381	if [[ $firstc = M \|\| $firstc = "?" ]]
1382	then
1383	Name=`echo "$line" \| cut -c8-`
1384	extension=`echo $Name \| cut -d. -f2`
1385	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1386	then
1387	Filenames="$Filenames "$Name
1388	fi
1389	fi
1390	done
1391
1392
1393	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1394	for dateiname in $Filenames
1395	do
1396	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1397	source_list=$source_list"$dateiname "
1398	done
1399
1400	cd - > /dev/null
1401
1402
1403	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1404	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1405	# VORHANDEN
1406	elif [[ "$source_list" != "" && $restart_run != true ]]
1407	then
1408
1409	cd $source_path
1410
1411	for filename in $source_list
1412	do
1413
1414	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1415	if [[ $(print $filename \| grep -c "/") != 0 ]]
1416	then
1417	printf "\n +++ source code file: $filename"
1418	printf "\n must not contain (\"/\") "
1419	locat=source; exit
1420	fi
1421
1422	if [[ ! -f $filename ]]
1423	then
1424	printf "\n +++ source code file: $filename"
1425	printf "\n does not exist"
1426	locat=source; exit
1427	else
1428	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1429	fi
1430
1431	done
1432
1433	cd - > /dev/null
1434
1435	fi
1436
1437
1438	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1439	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1440	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1441	if [[ $restart_run != true ]]
1442	then
1443
1444	if [[ ! -f "$source_path/$mainprog" ]]
1445	then
1446	printf "\n\n +++ main program: $mainprog"
1447	printf "\n does not exist in source directory"
1448	printf "\n \"$source_path\"\n"
1449	locat=source; exit
1450	else
1451	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1452	then
1453	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1454	source_list=${mainprog}" $source_list"
1455	fi
1456	fi
1457	fi
1458
1459
1460	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1461	if [[ $restart_run != true && "$add_source_path" != "" ]]
1462	then
1463
1464	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1465	if [[ ! -d $add_source_path ]]
1466	then
1467	printf "\n\n +++ WARNING: additional source code directory"
1468	printf "\n \"$add_source_path\" "
1469	printf "\n does not exist or is not a directory."
1470	printf "\n No source code will be used from this directory!\n"
1471	add_source_path=""
1472	sleep 3
1473	else
1474
1475	cd $add_source_path
1476
1477	Names=$(ls -1 *.f90 2>&1)
1478	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1479	Names=$(ls -1 *.F90 2>&1)
1480	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1481	Names=$(ls -1 *.F 2>&1)
1482	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1483	Names=$(ls -1 *.f 2>&1)
1484	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1485	Names=$(ls -1 *.c 2>&1)
1486	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1487
1488	cd - > /dev/null
1489	cd SOURCES_FOR_RUN_$fname
1490
1491	for dateiname in $AddFilenames
1492	do
1493	if [[ -f $dateiname ]]
1494	then
1495	printf "\n +++ source code file \"$dateiname\" found in additional"
1496	printf "\n source code directory \"$add_source_path\" "
1497	printf "\n as well as in directory \"$source_path\"."
1498	locat=source; exit
1499	fi
1500
1501	cp $add_source_path/$dateiname .
1502	source_list="$source_list $dateiname"
1503
1504	# Default User-Interface von der Liste entfernen, falls Datei
1505	# ein User-Interface enthaelt
1506	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1507	then
1508	if [[ -f user_interface.f90 ]]
1509	then
1510	rm -rf user_interface.f90
1511	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1512	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1513	printf "\n since a user-interface is found in file"
1514	printf "\n \"$add_source_path/$dateiname\" \n"
1515	sleep 3
1516	else
1517	printf "\n\n *** user-interface file \"$dateiname\" "
1518	printf "\n added to the files to be translated \n"
1519	sleep 3
1520	fi
1521	fi
1522	done
1523
1524	cd - > /dev/null
1525	fi
1526	fi
1527
1528
1529	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1530	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1531	if [[ $restart_run != true && -n $package_list ]]
1532	then
1533
1534	cd $source_path
1535
1536	for package in $package_list
1537	do
1538
1539	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1540
1541	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1542	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1543	# LIEFERT
1544	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1545
1546
1547	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1548	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1549	for source_list_name in $package_source_list
1550	do
1551	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1552	then
1553
1554	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1555	ending=`echo $source_list_name \| cut -f2 -d.`
1556	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1557	then
1558	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1559	source_list="$source_list $source_list_name"
1560	fi
1561	fi
1562	done
1563	done
1564
1565	cd - > /dev/null
1566	fi
1567
1568
1569	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1570	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1571	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1572	then
1573	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1574	if [[ ! -f $makefile ]]
1575	then
1576	printf "\n +++ file \"$makefile\" does not exist"
1577	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1578	locat=make; exit
1579	else
1580	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1581	fi
1582	fi
1583
1584	fi # do_compile=true
1585
1586
1587	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1588	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1589	if [[ $do_compile = true ]]
1590	then
1591
1592	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1593	# ZUSAMMENSETZEN
1594	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1595	then
1596	PPOPTS=-Dibm=ibm
1597	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1598	then
1599	PPOPTS=-Dnec
1600	else
1601	PPOPTS=-D$localhost
1602	fi
1603	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1604	then
1605	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1606	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1607	if [[ $netcdf_support = true ]]
1608	then
1609	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1610	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1611	fi
1612	if [[ $localhost = ibmy ]]
1613	then
1614	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1615	fi
1616	else
1617	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1618	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1619	if [[ $netcdf_support = true ]]
1620	then
1621	PPOPTS="$PPOPTS -Dnetcdf"
1622	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1623	fi
1624	fi
1625	if [[ -n $package_list ]]
1626	then
1627	for package in $package_list
1628	do
1629	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1630	then
1631	if [[ $package != "dvrp_graphics+1PE" ]]
1632	then
1633	PPOPTS="$PPOPTS -D$package=$package"
1634	else
1635	PPOPTS="$PPOPTS -Ddvrp_graphics"
1636	export use_seperate_pe_for_dvrp_output=true
1637	fi
1638	else
1639	if [[ $package != "dvrp_graphics+1PE" ]]
1640	then
1641	PPOPTS="$PPOPTS -D$package"
1642	else
1643	PPOPTS="$PPOPTS -Ddvrp_graphics"
1644	export use_seperate_pe_for_dvrp_output=true
1645	fi
1646	fi
1647	done
1648	fi
1649	if [[ -n $cpp_opts ]]
1650	then
1651	for popts in $cpp_opts
1652	do
1653	PPOPTS="$PPOPTS -D$popts"
1654	done
1655	fi
1656
1657	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1658	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1659
1660	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1661	if [[ $host = decalpha ]]
1662	then
1663	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1664	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1665	then
1666	# blanks in PPOPTS muessen durch "," ersetzt werden
1667	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1668	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1669	elif [[ $host = lcmuk ]]
1670	then
1671	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1672	elif [[ $host = lctit ]]
1673	then
1674	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1675	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1676	then
1677	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1678	else
1679	C_PPOPTS="$PPOPTS"
1680	fi
1681
1682	else
1683
1684
1685	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1686	if [[ $do_remote = false ]]
1687	then
1688	if [[ ! -f $executable ]]
1689	then
1690	printf "\n +++ executable file: $executable"
1691	printf "\n does not exist"
1692	locat=executable; exit
1693	fi
1694	fi
1695	fi
1696
1697
1698	# JOBMODUS FESTSTELLEN
1699	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1700	then
1701	jobmo=BATCH
1702	else
1703	jobmo=INTERACTIVE
1704	fi
1705
1706
1707	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1708	# DURCH BENUTZER ANDERWEITIG VEREINBART
1709	if [[ "$compiler_name" = "" ]]
1710	then
1711	case $localhost in
1712	(unics) compiler_name=f77;;
1713	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1714	then
1715	compiler_name=mpif90
1716	else
1717	compiler_name=ifc
1718	fi;;
1719	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1720	then
1721	compiler_name=mpif90
1722	echo ">>> compiler=mpif90"
1723	else
1724	compiler_name=pgf95
1725	echo ">>> compiler=pgf95"
1726	fi;;
1727	(nech) compiler_name=sxmpif90;;
1728	(decalpha) compiler_name=f95;;
1729	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1730	(*) printf "\n +++ unknown host name: $localhost \n";
1731	locat=localhost; exit;;
1732	esac
1733	fi
1734
1735
1736	# COMPILER AUF NECK UEBERSCHREIBEN
1737	[[ $localhost = neck ]] && compiler_name=mpif90
1738
1739
1740
1741	# PRAEPROZESSOR-PFAD BESTIMMEN
1742	case $localhost in
1743	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1744	esac
1745
1746
1747	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1748	kennung=$RANDOM
1749	if [[ "$tmp_user_catalog" = "" ]]
1750	then
1751	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1752	then
1753	tmp_user_catalog=$TMPDIR
1754	elif [[ $localhost = nech ]]
1755	then
1756	tmp_user_catalog=$WRKSHR
1757	else
1758	tmp_user_catalog=/tmp
1759	fi
1760	fi
1761	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1762
1763
1764	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1765	# BESTIMMEN
1766	if [[ "$tmp_data_catalog" = "" ]]
1767	then
1768	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1769	then
1770	tmp_data_catalog=$WORK/mrun_restart_data
1771	elif [[ $localhost = nech ]]
1772	then
1773	tmp_data_catalog=$WRKSHR/mrun_restart_data
1774	else
1775	tmp_data_catalog=/tmp/mrun_restart_data
1776	fi
1777	fi
1778
1779
1780	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1781	# ERSETZEN
1782	if [[ $do_remote = false && $do_compile = true ]]
1783	then
1784	eval fopts=\"$fopts\"
1785	eval lopts=\"$lopts\"
1786	fi
1787
1788
1789
1790	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1791	FOPTS="$fopts"
1792	LOPTS="$lopts"
1793	ROPTS="$ropts"
1794	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1795	then
1796	XOPT="-X $numprocs"
1797	fi
1798
1799
1800	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1801	# MIT EINGEBUNDEN WERDEN
1802	if [[ -n $package_list ]]
1803	then
1804	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1805	then
1806
1807	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1808	# DEM NOTEBOOK SCIROCCO
1809	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1810	then
1811	printf "\n"
1812	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1813	locat=parameter; exit
1814	fi
1815	if [[ $host = ibmh ]]
1816	then
1817	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1818	then
1819	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1820	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1821	else
1822	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1823	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1824	fi
1825	elif [[ $host = nech ]]
1826	then
1827	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1828	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1829	elif [[ $host = neck ]]
1830	then
1831	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1832	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1833	elif [[ $host = lcmuk ]]
1834	then
1835	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1836	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1837	fi
1838	fi
1839	fi
1840
1841
1842	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1843	if [[ $netcdf_support = true ]]
1844	then
1845	case $host in
1846	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1847	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1848	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1849	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1850	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1851	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1852	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1853	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1854	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1855	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1856	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1857	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1858
1859	esac
1860	fi
1861
1862	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1863	# GRAMM BENOETIGT
1864	done=false
1865	while [[ $done = false ]]
1866	do
1867	cputime=$cpumax
1868	if (( $cputime == 0 ))
1869	then
1870	printf "\n +++ cpu-time is undefined"
1871	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1872	printf "\n >>> "
1873	read cputime 1>/dev/null 2>&1
1874	else
1875	done=true
1876	fi
1877	cpumax=$cputime
1878	done
1879
1880	(( minuten = cputime / 60 ))
1881	(( sekunden = cputime - minuten * 60 ))
1882
1883
1884	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1885	if [[ $do_batch = true ]]
1886	then
1887	done=false
1888	while [[ $done = false ]]
1889	do
1890	if (( memory == 0 ))
1891	then
1892	printf "\n +++ memory demand is undefined"
1893	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1894	printf "\n >>> "
1895	read memory 1>/dev/null 2>&1
1896	else
1897	done=true
1898	fi
1899	done
1900	fi
1901
1902
1903	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1904	if [[ $do_remote = true && -z $remote_username ]]
1905	then
1906	while [[ -z $remote_username ]]
1907	do
1908	printf "\n +++ username on remote host \"$host\" is undefined"
1909	printf "\n >>> Please type username:"
1910	printf "\n >>> "
1911	read remote_username
1912	done
1913	mc="$mc -u$remote_username"
1914	fi
1915
1916	###########################################################################
1917	# HEADER-AUSGABE
1918	###########################################################################
1919
1920
1921	calltime=$(date)
1922	printf "\n"
1923	# [[ $silent = false ]] && clear
1924	printf "#--------------------------------------------------------------# \n"
1925	printf "\| $version$calltime \| \n"
1926	printf "\| \| \n"
1927	spalte1="called on:"; spalte2=$localhost_realname
1928	printf "\| $spalte1$spalte2 \| \n"
1929	if [[ $local_compile = false ]]
1930	then
1931	if [[ $do_remote = true ]]
1932	then
1933	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1934	else
1935	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1936	fi
1937	else
1938	spalte1="compiling test only!"; spalte2=""
1939	fi
1940	printf "\| $spalte1$spalte2 \| \n"
1941	if [[ -n $numprocs ]]
1942	then
1943	spalte1="number of PEs:"; spalte2=$numprocs
1944	printf "\| $spalte1$spalte2 \| \n"
1945	fi
1946	if [[ -n $tasks_per_node ]]
1947	then
1948	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1949	printf "\| $spalte1$spalte2 \| \n"
1950	fi
1951	if [[ $threads_per_task != 1 ]]
1952	then
1953	spalte1="threads per task:"; spalte2="$threads_per_task"
1954	printf "\| $spalte1$spalte2 \| \n"
1955	fi
1956	printf "\| \| \n"
1957	if [[ $do_compile = true ]]
1958	then
1959	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1960	printf "\| $spalte1$spalte2 \| \n"
1961	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1962	while [[ "$zeile" != "" ]]
1963	do
1964	spalte1=""
1965	spalte2=$zeile
1966	printf "\| $spalte1$spalte2 \| \n"
1967	zeile=$(echo "$zeile" \| cut -c41-)
1968	done
1969
1970	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1971	printf "\| $spalte1$spalte2 \| \n"
1972	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1973	while [[ "$zeile" != "" ]]
1974	do
1975	spalte1=""
1976	spalte2=$zeile
1977	printf "\| $spalte1$spalte2 \| \n"
1978	zeile=$(echo "$zeile" \| cut -c41-)
1979	done
1980
1981	spalte1=linker-options:; spalte2=$LOPTS
1982	printf "\| $spalte1$spalte2 \| \n"
1983	zeile=$(echo "$LOPTS" \| cut -c41-)
1984	while [[ "$zeile" != "" ]]
1985	do
1986	spalte1=""
1987	spalte2=$zeile
1988	printf "\| $spalte1$spalte2 \| \n"
1989	zeile=$(echo "$zeile" \| cut -c41-)
1990	done
1991
1992	spalte1="main program":; spalte2=$mainprog
1993	printf "\| $spalte1$spalte2 \| \n"
1994	if [[ "$use_makefile" = true ]]
1995	then
1996	spalte1="using \"make\" for com"; spalte2="piling and linking"
1997	printf "\| $spalte1$spalte2 \| \n"
1998	fi
1999	# if [[ $vtk_graphics = true ]]
2000	# then
2001	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2002	# printf "\| $spalte1$spalte2 \| \n"
2003	# fi
2004	else
2005	spalte1=executable:; spalte2=$executable
2006	printf "\| $spalte1$spalte2 \| \n"
2007	fi
2008	printf "\| \| \n"
2009	spalte1="base name of files":; spalte2=$fname
2010	printf "\| $spalte1$spalte2 \| \n"
2011	if [[ $fname != $afname ]]
2012	then
2013	spalte1="base name of input files":; spalte2=$afname
2014	printf "\| $spalte1$spalte2 \| \n"
2015	fi
2016	spalte1="INPUT control list":; spalte2=$input_list
2017	printf "\| $spalte1$spalte2 \| \n"
2018	spalte1="OUTPUT control list":; spalte2=$output_list
2019	printf "\| $spalte1$spalte2 \| \n"
2020
2021	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2022	then
2023	spalte1="memory demand / PE":; spalte2="$memory MB"
2024	printf "\| $spalte1$spalte2 \| \n"
2025	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2026	printf "\| $spalte1$spalte2 \| \n"
2027	fi
2028
2029	if [[ $do_compile = true ]]
2030	then
2031	printf "\| \| \n"
2032	printf "\| Files to be compiled: \| \n"
2033	zeile=$source_list
2034	while [[ "$zeile" != "" ]]
2035	do
2036	spalte3=$zeile
2037	printf "\| $spalte3 \| \n"
2038	zeile=$(echo "$zeile" \| cut -c61-)
2039	done
2040	fi
2041	printf "#--------------------------------------------------------------#"
2042
2043
2044
2045	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2046	if [[ $do_trace = true ]]
2047	then
2048	(( i = 0 ))
2049	while (( i < iin ))
2050	do
2051	(( i = i + 1 ))
2052	if (( i == 1 ))
2053	then
2054	printf "\n\n >>> INPUT-file assignments:\n"
2055	fi
2056	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2057	done
2058	(( i = 0 ))
2059	while (( i < iout ))
2060	do
2061	(( i = i + 1 ))
2062	if (( i == 1 ))
2063	then
2064	printf "\n\n >>> OUTPUT-file assignments:\n"
2065	fi
2066	printf "\n ${localout[$i]} : ${pathout[$i]}"
2067	done
2068	(( i = 0 ))
2069	while (( i < iic ))
2070	do
2071	(( i = i + 1 ))
2072	if (( i == 1 ))
2073	then
2074	printf "\n\n >>> INPUT-commands:\n"
2075	fi
2076	printf "\n ${in_command[$i]}"
2077	done
2078	(( i = 0 ))
2079	while (( i < ioc ))
2080	do
2081	(( i = i + 1 ))
2082	if (( i == 1 ))
2083	then
2084	printf "\n\n >>> OUTPUT-commands:\n"
2085	fi
2086	printf "\n ${out_command[$i]}"
2087	done
2088	fi
2089
2090
2091	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2092	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2093	then
2094	antwort=dummy
2095	printf "\n\n"
2096	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2097	do
2098	printf " >>> everything o.k. (y/n) ? "
2099	read antwort
2100	done
2101	if [[ $antwort = n \|\| $antwort = N ]]
2102	then
2103	locat=user_abort; (( iec = 0 )); exit
2104	fi
2105	if [[ $do_batch = true ]]
2106	then
2107	printf " >>> batch-job will be created and submitted"
2108	else
2109	if [[ $local_compile = false ]]
2110	then
2111	printf " >>> MRUN will now continue to execute on this machine"
2112	else
2113	printf " >>> a test compilation will now be carried out on this machine"
2114	fi
2115	fi
2116	fi
2117
2118
2119
2120
2121	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2122	# CHENDE AKTIONEN DURCHGEFUEHRT
2123	if [[ $do_batch = false ]]
2124	then
2125
2126
2127	# TEMPORAEREN KATALOG ERZEUGEN
2128	mkdir -p $TEMPDIR
2129	chmod go+rx $TEMPDIR
2130	tmpcreate=true
2131
2132
2133	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2134	# TEMPORAERES VERZEICHNIS KOPIEREN
2135	if [[ $do_compile = true ]]
2136	then
2137
2138	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2139	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2140	if [[ $localhost = nech ]]
2141	then
2142	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2143	if mkdir -p $TEMPDIR_COMPILE
2144	then
2145	printf "\n *** \"$TEMPDIR_COMPILE\" "
2146	printf "\n is generated as temporary directory for cross compiling\n"
2147	else
2148	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2149	printf "\n needed for cross compilation failed"
2150	locat=compile
2151	exit
2152	fi
2153	else
2154	TEMPDIR_COMPILE=$TEMPDIR
2155	fi
2156
2157	if [[ "$use_makefile" = true ]]
2158	then
2159
2160	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2161	line=""
2162	grep "%depository_path" $config_file \| while read line
2163	do
2164	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2165	then
2166	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2167	then
2168	global_depository_path=`echo $line \| cut -d" " -s -f2`
2169	fi
2170	fi
2171	done
2172
2173	line=""
2174	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2175	do
2176	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2177	then
2178	local_depository_path=`echo $line \| cut -d" " -s -f2`
2179	fi
2180	done
2181
2182	if [[ "$local_depository_path" = "" ]]
2183	then
2184	if [[ "$global_depository_path" != "" ]]
2185	then
2186	local_depository_path=$global_depository_path
2187	else
2188	printf "\n\n +++ no depository path found in configuration file"
2189	printf "\n for local host \"$localhost\" "
2190	printf "\n please set \"\%depository_path\" in configuration file\n"
2191	locat=config_file; exit
2192	fi
2193	fi
2194	eval local_depository_path=$local_depository_path
2195
2196	basename=`print $mainprog \| cut -f1 -d"."`
2197	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2198	if [[ ! -f $make_depository ]]
2199	then
2200	printf "\n"
2201	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2202	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2203	else
2204	cp $make_depository $TEMPDIR_COMPILE
2205	cd $TEMPDIR_COMPILE
2206	tar -xf $make_depository > /dev/null 2>&1
2207	cd - > /dev/null
2208	fi
2209
2210	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2211
2212	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2213	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2214	# MAKEFILE EINTRAGEN
2215	cd $TEMPDIR_COMPILE
2216	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2217	if [[ "$interface_file" != "" ]]
2218	then
2219	interface_file=`echo $interface_file \| cut -d"." -f1`
2220	mv Makefile Makefile_old
2221	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2222	fi
2223	cd - > /dev/null
2224	fi
2225	else
2226	cp $executable ${TEMPDIR}/a.out
2227	fi
2228
2229
2230	# WECHSEL IN TEMPORAEREN KATALOG
2231	cd $TEMPDIR
2232	printf "\n *** changed to temporary directory: $TEMPDIR"
2233
2234
2235	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2236	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2237	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2238	# ERMITTELN
2239	(( i = 0 ))
2240	while (( i < iout ))
2241	do
2242	(( i = i + 1 ))
2243	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2244	then
2245	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2246	else
2247	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2248	fi
2249	done
2250
2251
2252	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2253	if [[ $do_compile = true ]]
2254	then
2255
2256
2257	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2258	if [[ "$use_makefile" = true ]]
2259	then
2260	printf "\n\n\n *** compilation starts \n$striche\n"
2261	printf " *** compilation with make using following options:\n"
2262	printf " compilername: $compiler_name\n"
2263	printf " options: $FOPTS\n"
2264	printf " preprocessor-directives: $C_PPOPTS \n"
2265	printf " linker-options: $LOPTS \n"
2266	printf " source code files: $source_list \n"
2267
2268	if [[ $localhost = nech ]]
2269	then
2270	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2271	cp $TEMPDIR_COMPILE/a.out .
2272	[[ $? != 0 ]] && compile_error=true
2273	rm -rf $TEMPDIR_COMPILE
2274	else
2275	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2276	fi
2277
2278	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2279	else
2280
2281
2282	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2283	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2284	printf "\n\n\n *** compilation starts \n$striche\n"
2285
2286
2287	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2288	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2289	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2290	new_source_list=""
2291	for filename in $source_list
2292	do
2293
2294	basename=`print $filename \| cut -f1 -d"."`
2295
2296	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2297	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2298	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2299
2300	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2301	then
2302	new_source_list="$new_source_list "$filename
2303	else
2304
2305	if [[ "$comp_var" = "" ]]
2306	then
2307	SPECIAL_COMPILER=$compiler_name
2308	else
2309	SPECIAL_COMPILER=$comp_var
2310	fi
2311
2312	if [[ "$comp_opt_var" = "" ]]
2313	then
2314	SPECIAL_FOPTS=$FOPTS
2315	else
2316	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2317	fi
2318
2319	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2320	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2321	if [[ $? != 0 ]]
2322	then
2323	printf "\n +++ compiling error occured"
2324	locat=compile
2325	exit
2326	fi
2327	new_source_list="$new_source_list "${basename}.o
2328	fi
2329	done
2330	source_list="$new_source_list"
2331
2332
2333	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2334	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2335	printf " preprocessor-directives: $C_PPOPTS \n"
2336	printf " linker-options: $LOPTS \n"
2337	printf " source code files: $source_list \n"
2338
2339	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2340
2341	fi
2342	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2343	then
2344	printf "\n +++ error occured while compiling or linking"
2345	locat=compile
2346	exit
2347	else
2348	printf "$striche\n *** compilation finished \n"
2349	fi
2350	fi
2351
2352
2353	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2354	if [[ $local_compile = true ]]
2355	then
2356	cd $HOME
2357	rm -rf $TEMPDIR
2358	locat=local_compile; exit
2359	fi
2360
2361
2362	# BEREITSTELLEN DER INPUT-DATEIEN
2363	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2364	(( i = 0 ))
2365	while (( i < iin ))
2366	do
2367	(( i = i + 1 ))
2368	if (( i == 1 ))
2369	then
2370	printf "\n\n *** providing INPUT-files:\n$striche"
2371	fi
2372
2373
2374	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2375	if [[ "${transin[$i]}" = unavailable ]]
2376	then
2377	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2378	then
2379	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2380	printf "\n is not available!"
2381	else
2382	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2383	printf "\n is not available!"
2384	fi
2385	continue
2386	fi
2387
2388	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2389	files_for_pes=false; datentyp=file
2390	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2391	then
2392	files_for_pes=true; datentyp=directory
2393	actionin[$i]=""
2394	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2395	then
2396	actionin[$i]=""
2397	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2398	then
2399	files_for_pes=true; datentyp=directory
2400	actionin[$i]="ar"
2401	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2402	then
2403	actionin[$i]="ar"
2404	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2405	then
2406	files_for_pes=true; datentyp=directory
2407	actionin[$i]="fl"
2408	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2409	then
2410	actionin[$i]="fl"
2411	fi
2412
2413	if [[ $files_for_pes = true ]]
2414	then
2415	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2416	else
2417	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2418	fi
2419
2420	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2421	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2422	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2423	# SERVER ZU HOLEN
2424	if [[ "${actionin[$i]}" = fl ]]
2425	then
2426	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2427	if [[ $files_for_pes = false ]]
2428	then
2429	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2430	then
2431	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2432	got_tmp[$i]=true
2433	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2434	then
2435	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2436	printf "\n *** trying to use backup copy in \"$WORK\" "
2437	cp $WORK/${frelin[$i]} ${localin[$i]}
2438	else
2439	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2440	printf "\n or \"$tmp_data_catalog\" does not exist!"
2441	printf "\n *** trying to get copy from archive"
2442	actionin[$i]=ar
2443	fi
2444	else
2445	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2446	then
2447	mkdir ${localin[$i]}
2448	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2449	got_tmp[$i]=true
2450	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2451	then
2452	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2453	printf "\n *** trying to use backup copy in \"$WORK\" "
2454	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2455	else
2456	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2457	printf "\n or \"$tmp_data_catalog\" does not exist!"
2458	printf "\n *** trying to get copy from archive"
2459	actionin[$i]=ar
2460	fi
2461	fi
2462	fi
2463
2464
2465	# DATEI LIEGT AUF ARCHIV-SERVER
2466	if [[ "${actionin[$i]}" = ar ]]
2467	then
2468
2469	if [[ $files_for_pes = false ]]
2470	then
2471	printf "\n file will be restored from archive-system ($archive_system)!"
2472	else
2473	printf "\n directory will be restored from archive-system ($archive_system)!"
2474	fi
2475
2476	file_restored=false
2477
2478	if [[ $archive_system = asterix ]]
2479	then
2480	do_stagein=true
2481	(( stagein_anz = 0 ))
2482	while [[ $do_stagein = true ]]
2483	do
2484	if [[ $files_for_pes = false ]]
2485	then
2486	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2487	else
2488	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2489	fi
2490	cat STAGEIN_OUTPUT
2491	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2492	then
2493	file_restored=true
2494	do_stagein=false
2495	else
2496	(( stagein_anz = stagein_anz + 1 ))
2497	if (( stagein_anz == 10 ))
2498	then
2499	printf "\n +++ stagein stoped after 10 tries"
2500	locat=stage
2501	exit
2502	fi
2503	printf "\n +++ restoring from archive failed, trying again:"
2504	sleep 900
2505	fi
2506	done
2507	elif [[ $archive_system = DMF ]]
2508	then
2509	if [[ $files_for_pes = false ]]
2510	then
2511	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2512	locat=DMF
2513	exit
2514	else
2515	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2516	cp -r $ARCHIVE/${frelin[$i]} $PWD
2517	file_restored=true
2518	fi
2519	elif [[ $archive_system = tivoli ]]
2520	then
2521	if [[ $files_for_pes = false ]]
2522	then
2523	if [[ $localhost = ibmh ]]
2524	then
2525	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2526	else
2527	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2528	fi
2529	else
2530	(( inode = 0 ))
2531	while (( inode < nodes ))
2532	do
2533	if [[ $localhost = ibmh ]]
2534	then
2535	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2536	else
2537	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2538	fi
2539	(( inode = inode + 1 ))
2540	done
2541	fi
2542	file_restored=true
2543	elif [[ $archive_system = ut ]]
2544	then
2545	if [[ $files_for_pes = false ]]
2546	then
2547	cp $UT/${frelin[$i]} .
2548	else
2549	(( inode = 0 ))
2550	while (( inode < nodes ))
2551	do
2552	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2553	(( inode = inode + 1 ))
2554	done
2555	fi
2556	file_restored=true
2557	else
2558	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2559	locat=rearchive
2560	exit
2561	fi
2562
2563	if [[ $file_restored = true ]]
2564	then
2565
2566	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2567	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2568	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2569	if [[ $files_for_pes = false ]]
2570	then
2571	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2572	else
2573	mkdir $tmp_data_catalog/${frelin[$i]}
2574	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2575	fi
2576	got_tmp[$i]=true
2577
2578	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2579	mv ${frelin[$i]} ${localin[$i]}
2580
2581	fi
2582	fi
2583
2584
2585	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2586	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2587	then
2588
2589	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2590	then
2591
2592	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2593	printf "\n file will be provided for $numprocs processors"
2594	mkdir ${localin[$i]}
2595	ival=$numprocs
2596	(( ii = 0 ))
2597	while (( ii <= ival-1 ))
2598	do
2599	if (( ii < 10 ))
2600	then
2601	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2602	elif (( ii < 100 ))
2603	then
2604	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2605	elif (( ii < 1000 ))
2606	then
2607	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2608	else
2609	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2610	fi
2611	(( ii = ii + 1 ))
2612	done
2613
2614	else
2615
2616	if [[ $files_for_pes = true ]]
2617	then
2618
2619	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2620	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2621	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2622	# PER MOVE UMBENANNT WERDEN
2623	printf "\n providing $numprocs files for the respective processors"
2624	mkdir ${localin[$i]}
2625	cp -r ${absnamein[$i]}/* ${localin[$i]}
2626
2627	else
2628	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2629	cp ${absnamein[$i]} ${localin[$i]}
2630	fi
2631	fi
2632	fi
2633
2634	done
2635	if (( i != 0 ))
2636	then
2637	printf "\n$striche\n *** all INPUT-files provided \n"
2638	fi
2639
2640
2641	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2642	# LESEN VON PALM)
2643	cat > ENVPAR << %%END%%
2644	&envpar run_identifier = '$fname', host = '$localhost',
2645	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2646	maximum_cpu_time_allowed = ${cpumax}. /
2647
2648	%%END%%
2649
2650
2651	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2652	(( i = 0 ))
2653	while (( i < iic ))
2654	do
2655	(( i = i + 1 ))
2656	if (( i == 1 ))
2657	then
2658	printf "\n\n *** execution of INPUT-commands:\n$striche"
2659	fi
2660	printf "\n >>> ${in_command[$i]}"
2661	eval ${in_command[$i]}
2662	if (( i == iic ))
2663	then
2664	printf "\n$striche\n"
2665	fi
2666	done
2667
2668
2669	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2670	cpurest=${cpumax}.
2671
2672
2673	# PROGRAMMSTART
2674	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2675	PATH=$PATH:$TEMPDIR
2676
2677	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2678	then
2679	if [[ "$ENVIRONMENT" = BATCH ]]
2680	then
2681	printf "\n +++ debug is allowed in interactive mode only"
2682	locat=debug
2683	exit
2684	fi
2685	if [[ $localhost = decalpha ]]
2686	then
2687	dxladebug a.out
2688	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2689	then
2690
2691	# SETUP THE IBM MPI ENVIRONMENT
2692	export MP_SHARED_MEMORY=yes
2693	export AIXTHREADS_SCOPE=S
2694	export OMP_NUM_THREADS=$threads_per_task
2695	export AUTHSTATE=files
2696	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2697
2698	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2699	export MP_ADAPTER_USE=shared
2700	export MP_CPU_USE=multiple
2701	export MP_TIMEOUT=1200
2702
2703	unset MP_TASK_AFFINITY
2704
2705	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2706	#(( ii = 1 ))
2707	#while (( ii <= $numprocs ))
2708	#do
2709	# echo $localhost_realname >> hostfile
2710	# (( ii = ii + 1 ))
2711	#done
2712	#export MP_HOSTFILE=hostfile
2713
2714	if [[ "$LOADLBATCH" = yes ]]
2715	then
2716	totalview poe a.out $ROPTS
2717	else
2718	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2719	export TVDSVRLAUNCHCMD=ssh
2720	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2721	fi
2722	else
2723	printf "\n +++ no debug available on \"$localhost\" "
2724	printf "\n or not implemented in mrun so far"
2725	locat=debug
2726	exit
2727	fi
2728	else
2729	if [[ -n $numprocs ]]
2730	then
2731
2732	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2733	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2734	then
2735	# SETUP THE IBM MPI ENVIRONMENT
2736	export MP_SHARED_MEMORY=yes
2737	export AIXTHREAD_SCOPE=S
2738	export OMP_NUM_THREADS=$threads_per_task
2739	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2740	export AUTHSTATE=files
2741	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2742	# export MP_PRINTENV=yes
2743
2744	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2745	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2746	export MP_WAIT_MODE=poll
2747	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2748	# export MP_EAGER_LIMIT=65535
2749
2750	# # TESTWEISE FUER TURBOMPI (JAN 05)
2751	# export MPJ_MTAB=128
2752	# export MPJ_ALLTOALL=1
2753	# export MPJ_ALLTOALLV=1
2754
2755	if [[ "$LOADLBATCH" = yes ]]
2756	then
2757	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2758	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2759	then
2760	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2761	else
2762	poe ./a.out $ROPTS > aout_output 2>&1
2763	fi
2764	else
2765	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2766	then
2767	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2768	elif [[ $localhost = ibmy ]]
2769	then
2770	if [[ -f $hostfile ]]
2771	then
2772	cp $hostfile hostfile
2773	else
2774	(( ii = 1 ))
2775	while (( ii <= $numprocs ))
2776	do
2777	echo $localhost_realname >> hostfile
2778	(( ii = ii + 1 ))
2779	done
2780	fi
2781	export MP_HOSTFILE=hostfile
2782	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2783	else
2784	if [[ "$host_file" = "" ]]
2785	then
2786	printf "\n +++ no hostfile given in configuration file"
2787	locat=config_file
2788	exit
2789	else
2790	eval host_file=$host_file
2791	fi
2792	export MP_HOSTFILE=$host_file
2793	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2794	fi
2795	fi
2796	elif [[ $host = nech \|\| $host = neck ]]
2797	then
2798	(( ii = nodes ))
2799	if [[ $ii = 1 ]]
2800	then
2801	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2802	export MPIPROGINF=YES
2803	echo "*** execution on single node with mpirun"
2804	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2805	else
2806	(( i = 0 ))
2807	while (( i < ii ))
2808	do
2809	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2810	(( i = i + 1 ))
2811	done
2812
2813	echo "#!/bin/sh" > mpi_exec_shell
2814	echo " " >> mpi_exec_shell
2815	echo "set -u" >> mpi_exec_shell
2816	echo "F_ERRCNT=0" >> mpi_exec_shell
2817	echo "MPIPROGINV=YES" >> mpi_exec_shell
2818	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2819	echo "cpurest=$cpurest" >> mpi_exec_shell
2820	echo "fname=$fname" >> mpi_exec_shell
2821	echo "localhost=$localhost" >> mpi_exec_shell
2822	echo "return_addres=$return_addres" >> mpi_exec_shell
2823	echo "return_username=$return_username" >> mpi_exec_shell
2824	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2825	echo "write_binary=$write_binary" >> mpi_exec_shell
2826	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2827	echo " " >> mpi_exec_shell
2828	echo "export F_ERRCNT" >> mpi_exec_shell
2829	echo "export MPIPROGINV" >> mpi_exec_shell
2830	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2831	echo "export cpurest" >> mpi_exec_shell
2832	echo "export fname" >> mpi_exec_shell
2833	echo "export localhost" >> mpi_exec_shell
2834	echo "export return_addres" >> mpi_exec_shell
2835	echo "export return_username" >> mpi_exec_shell
2836	echo "export tasks_per_node" >> mpi_exec_shell
2837	echo "export write_binary" >> mpi_exec_shell
2838	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2839	echo " " >> mpi_exec_shell
2840	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2841
2842	chmod u+x mpi_exec_shell
2843	export MPIPROGINF=YES
2844	mpirun -f multinode_config &
2845	wait
2846
2847	fi
2848	elif [[ $host = lcmuk ]]
2849	then
2850
2851	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2852	# DOES NOT EXIST
2853	if [[ -f $hostfile ]]
2854	then
2855	cp $hostfile hostfile
2856	else
2857	(( ii = 1 ))
2858	while (( ii <= $numprocs / $threads_per_task ))
2859	do
2860	echo $localhost_realname >> hostfile
2861	(( ii = ii + 1 ))
2862	done
2863	fi
2864	(( ii = $numprocs / $threads_per_task ))
2865	eval zeile=\"`head -n $ii hostfile`\"
2866	printf "\n *** running on: $zeile"
2867	export OMP_NUM_THREADS=$threads_per_task
2868	if [[ $threads_per_task != 1 ]]
2869	then
2870	printf "\n threads per task: $threads_per_task"
2871	fi
2872	printf "\n\n"
2873	if [[ $scirocco = true ]]
2874	then
2875	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2876	else
2877	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2878	fi
2879	elif [[ $host = decalpha ]]
2880	then
2881	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2882	elif [[ $host = lctit ]]
2883	then
2884	export runfile=runfile.$kennung
2885
2886	echo "cd $PWD" > $runfile
2887	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2888	echo "export cpurest=$cpurest" >> $runfile
2889	echo "export fname=$fname" >> $runfile
2890	echo "export localhost=$localhost" >> $runfile
2891	echo "export return_addres=$return_addres" >> $runfile
2892	echo "export return_username=$return_username" >> $runfile
2893	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2894	echo "export write_binary=$write_binary" >> $runfile
2895	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2896	echo "./a.out" >> $runfile
2897	chmod u+x $runfile
2898
2899	if [[ "$QUEUE" = interactive ]]
2900	then
2901	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2902	else
2903	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2904	fi
2905
2906	rm $runfile
2907	else
2908	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2909	fi
2910	[[ $? != 0 ]] && execution_error=true
2911
2912
2913	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2914	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2915	then
2916	apprentice
2917	fi
2918	else
2919	a.out $ROPTS > aout_output 2>&1
2920	fi
2921	fi
2922	if [[ $? != 0 \|\| $execution_error = true ]]
2923	then
2924
2925	# ABBRUCH BEI LAUFZEITFEHLER
2926	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2927	printf "\n +++ runtime error occured"
2928	locat=execution
2929	exit
2930	else
2931	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2932	printf "\n$striche\n *** execution finished \n"
2933	fi
2934
2935
2936
2937	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2938	(( i = 0 ))
2939	while (( i < ioc ))
2940	do
2941	(( i = i + 1 ))
2942	if (( i == 1 ))
2943	then
2944	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2945	fi
2946	printf "\n >>> ${out_command[$i]}"
2947	eval ${out_command[$i]}
2948	if (( i == ioc ))
2949	then
2950	printf "\n$striche\n"
2951	fi
2952	done
2953
2954
2955	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2956	if [[ $do_trace = true ]]
2957	then
2958	printf "\n\n"
2959	ls -al
2960	fi
2961
2962
2963
2964	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2965	(( i = 0 ))
2966	while (( i < iout ))
2967	do
2968	(( i = i + 1 ))
2969	if (( i == 1 ))
2970	then
2971	printf "\n\n *** saving OUTPUT-files:\n$striche"
2972	fi
2973
2974	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2975	files_for_pes=false; filetyp=file
2976	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2977	then
2978	files_for_pes=true; filetyp=directory
2979	actionout[$i]=""
2980	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2981	then
2982	actionout[$i]=""
2983	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2984	then
2985	files_for_pes=true; filetyp=directory
2986	actionout[$i]="ar"
2987	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2988	then
2989	actionout[$i]="ar"
2990	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2991	then
2992	files_for_pes=true; filetyp=directory
2993	actionout[$i]="fl"
2994	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2995	then
2996	actionout[$i]="fl"
2997	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2998	then
2999	files_for_pes=true; filetyp=directory
3000	actionout[$i]="tr"
3001	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3002	then
3003	actionout[$i]="tr"
3004	fi
3005
3006	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3007	then
3008	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3009	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3010	then
3011	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3012	else
3013
3014
3015	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3016	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3017	# REMOTE-RECHNUNGEN
3018	if [[ "${actionout[$i]}" = tr ]]
3019	then
3020	if [[ $localhost != $fromhost ]]
3021	then
3022	if [[ $files_for_pes = false ]]
3023	then
3024	cps=""
3025	cst=""
3026	else
3027	cps=-c
3028	cst="/"
3029	fi
3030	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3031	then
3032
3033	# TRANSFER IN EIGENSTAENDIGEM JOB
3034	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3035	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3036	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3037	if [[ $files_for_pes = false ]]
3038	then
3039	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3040	else
3041	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3042	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3043	fi
3044
3045	echo "set -x" > transfer_${localout[$i]}
3046	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3047	if [[ $filetransfer_protocol = ftp ]]
3048	then
3049	if [[ $files_for_pes = true ]]
3050	then
3051	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3052	fi
3053	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3054	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3055	printf "\n or higher cycle\n"
3056	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3057	else
3058	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3059	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3060	printf "\n or higher cycle\n"
3061	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3062	fi
3063	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3064
3065	if [[ $localhost = nech ]]
3066	then
3067	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3068	else
3069	if [[ "$LOGNAME" = b323013 ]]
3070	then
3071	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3072	else
3073	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3074	fi
3075	fi
3076
3077	else
3078
3079	# TRANSFER INNERHALB DIESES JOBS
3080	transfer_failed=false
3081	if [[ $filetransfer_protocol = ftp ]]
3082	then
3083	if [[ $files_for_pes = true ]]
3084	then
3085	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3086	fi
3087	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3088	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3089	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3090	[[ $? != 0 ]] && transfer_failed=true
3091	else
3092	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3093	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3094	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3095	[[ $? != 0 ]] && transfer_failed=true
3096	fi
3097
3098	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3099	# LOKALER MASCHINE ANLEGEN
3100	if [[ $transfer_failed = true ]]
3101	then
3102	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3103	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3104
3105	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3106	# ANLEGEN.
3107	eval local_catalog=${pathout[$i]}
3108	if [[ ! -d $local_catalog ]]
3109	then
3110	printf " *** local directory does not exist. Trying to create:\n"
3111	printf " $local_catalog \n"
3112	mkdir -p $local_catalog
3113	fi
3114	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3115	transfer_problems=true
3116	fi
3117	fi
3118	else
3119
3120	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3121	actionout[$i]=""
3122	fi
3123	fi
3124
3125
3126	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3127	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3128	# REMOTE-RECHNUNGEN
3129	if [[ "${actionout[$i]}" = tra ]]
3130	then
3131	if [[ $localhost != $fromhost ]]
3132	then
3133	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3134	then
3135
3136	# TRANSFER IN EIGENSTAENDIGEM JOB
3137	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3138	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3139	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3140	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3141
3142	echo "set -x" > transfer_${localout[$i]}
3143	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3144	if [[ $filetransfer_protocol = ftp ]]
3145	then
3146	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3147	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3148	printf "\n or higher cycle\n"
3149	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3150	else
3151	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3152	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3153	printf "\n or higher cycle\n"
3154	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3155	fi
3156	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3157
3158	if [[ $localhost = nech ]]
3159	then
3160	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3161	else
3162	if [[ $LOGNAME = b323013 ]]
3163	then
3164	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3165	else
3166	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3167	fi
3168	fi
3169
3170	else
3171
3172	# TRANSFER INNERHALB DIESES JOBS
3173	transfer_failed=false
3174	if [[ $filetransfer_protocol = ftp ]]
3175	then
3176	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3177	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3178	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3179	[[ $? != 0 ]] && transfer_failed=true
3180	else
3181	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3182	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3183	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3184	[[ $? != 0 ]] && transfer_failed=true
3185	fi
3186
3187	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3188	# LOKALER MASCHINE ANLEGEN
3189	if [[ $transfer_failed = true ]]
3190	then
3191	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3192	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3193
3194	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3195	# ANLEGEN
3196	eval local_catalog=${pathout[$i]}
3197	if [[ ! -d $local_catalog ]]
3198	then
3199	printf " *** local directory does not exist. Trying to create:\n"
3200	printf " $local_catalog \n"
3201	mkdir -p $local_catalog
3202	fi
3203
3204	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3205	transfer_problems=true
3206	fi
3207	fi
3208	else
3209
3210	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3211	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3212	actionout[$i]=a
3213	fi
3214	fi
3215
3216
3217	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3218	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3219	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3220	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3221	if [[ "${actionout[$i]}" = fl ]]
3222	then
3223	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3224	chmod g+rx $tmp_data_catalog
3225	if [[ $files_for_pes = false ]]
3226	then
3227	printf "\n >>> OUTPUT: ${localout[$i]} to"
3228	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3229	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3230	else
3231	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3232	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3233	mkdir $tmp_data_catalog/${frelout[$i]}
3234	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3235	fi
3236
3237
3238	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3239	if [[ $store_on_archive_system = true ]]
3240	then
3241
3242	if [[ $archive_system = asterix ]]
3243	then
3244	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3245	if [[ $files_for_pes = false ]]
3246	then
3247	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3248	else
3249	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3250	fi
3251	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3252	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3253	echo "then" >> archive_${frelout[$i]}
3254	echo " do_stageout=false" >> archive_${frelout[$i]}
3255	echo "else" >> archive_${frelout[$i]}
3256	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3257	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3258	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3259	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3260	if [[ $files_for_pes = false ]]
3261	then
3262	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3263	else
3264	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3265	fi
3266	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3267	echo "fi" >> archive_${frelout[$i]}
3268	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3269	elif [[ $archive_system = DMF ]]
3270	then
3271	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3272	if [[ $files_for_pes = false ]]
3273	then
3274	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3275	locat=DMF
3276	exit
3277	else
3278	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3279	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3280	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3281	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3282	fi
3283	elif [[ $archive_system = tivoli ]]
3284	then
3285	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3286	if [[ $files_for_pes = false ]]
3287	then
3288	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3289	echo "set -x" >> archive_${frelout[$i]}
3290	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3291	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3292	else
3293
3294	echo "set -x" >> archive_${frelout[$i]}
3295	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3296	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3297	cd $tmp_data_catalog
3298	all_files=`ls -1 ${frelout[$i]}/*`
3299	cd - > /dev/null
3300	(( inode = 0 ))
3301	(( tp1 = tasks_per_node + 1 ))
3302	while (( inode < nodes ))
3303	do
3304	# echo "*** all_files = \"$all_files\" "
3305	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3306	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3307	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3308	# echo "*** files = \"$files\" "
3309	# echo "*** all_files = \"$all_files\" "
3310	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3311	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3312	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3313	(( inode = inode + 1 ))
3314	done
3315	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3316	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3317	fi
3318	elif [[ $archive_system = ut ]]
3319	then
3320	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3321	if [[ $files_for_pes = false ]]
3322	then
3323	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3324	echo "set -x" >> archive_${frelout[$i]}
3325	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3326	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3327	else
3328
3329	echo "set -x" >> archive_${frelout[$i]}
3330	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3331	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3332	cd $tmp_data_catalog
3333	all_files=`ls -1 ${frelout[$i]}/*`
3334	cd - > /dev/null
3335	(( inode = 0 ))
3336	(( tp1 = tasks_per_node + 1 ))
3337	while (( inode < nodes ))
3338	do
3339	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3340	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3341	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3342	(( inode = inode + 1 ))
3343	done
3344	fi
3345	elif [[ $archive_system = none ]]
3346	then
3347	printf " +++ archiving on $localhost not available!\n"
3348	fi
3349
3350	if [[ $archive_system != none ]]
3351	then
3352	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3353	then
3354	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3355	elif [[ $localhost = nech ]]
3356	then
3357	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3358	fi
3359	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3360	fi
3361	else
3362	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3363	fi
3364
3365
3366	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3367	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3368	if [[ $files_for_pes = false ]]
3369	then
3370	cat /dev/null > ${pathout[$i]}
3371	else
3372	mkdir -p ${pathout[$i]}
3373	fi
3374
3375	fi
3376
3377
3378	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3379	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3380	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3381	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3382	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3383	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3384	if [[ "${actionout[$i]}" = ar ]]
3385	then
3386	if [[ $files_for_pes = false ]]
3387	then
3388	printf "\n >>> OUTPUT: ${localout[$i]} to"
3389	printf "\n ${pathout[$i]}"
3390	printf "\n File will be copied to archive-system ($archive_system) !\n"
3391	else
3392	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3393	printf "\n ${pathout[$i]}"
3394	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3395	fi
3396	mv ${localout[$i]} ${frelout[$i]}
3397
3398	file_saved=false
3399
3400	if [[ $archive_system = asterix ]]
3401	then
3402	do_stageout=true
3403	(( stageout_anz = 0 ))
3404	while [[ $do_stageout = true ]]
3405	do
3406	if [[ $files_for_pes = false ]]
3407	then
3408	stageout ${frelout[$i]} > STAGE_OUTPUT
3409	else
3410	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3411	fi
3412	cat STAGE_OUTPUT
3413	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3414	then
3415	file_saved=true
3416	do_stageout=false
3417	else
3418	if [[ $files_for_pes = false ]]
3419	then
3420	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3421	else
3422	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3423	fi
3424	(( stageout_anz = stageout_anz + 1 ))
3425	if (( stageout_anz == 10 ))
3426	then
3427	printf "\n +++ stoped after 10 unsuccessful tries!"
3428	archive_save=false
3429	do_stageout=false
3430	else
3431	printf "\n *** new try to store on archive after 15 min:"
3432	sleep 900
3433	fi
3434	fi
3435	done
3436	elif [[ $archive_system = DMF ]]
3437	then
3438	if [[ $files_for_pes = false ]]
3439	then
3440	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3441	locat=DMF
3442	exit
3443	else
3444	rm -rf $ARCHIVE/${frelout[$i]}
3445	cp -r ${frelout[$i]} $ARCHIVE
3446	fi
3447	file_saved=true
3448	elif [[ $archive_system = tivoli ]]
3449	then
3450	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3451	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3452	# GELEGT WERDEN
3453	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3454	chmod g+rx $tmp_data_catalog
3455	if [[ $files_for_pes = false ]]
3456	then
3457	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3458	else
3459	mkdir $tmp_data_catalog/${frelout[$i]}
3460	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3461	fi
3462
3463	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3464	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3465	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3466	if [[ $files_for_pes = false ]]
3467	then
3468	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3469	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3470	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3471	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3472	else
3473	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3474	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3475	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3476	fi
3477
3478	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3479	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3480	file_saved=true
3481
3482	elif [[ $archive_system = ut ]]
3483	then
3484	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3485	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3486	# GELEGT WERDEN
3487	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3488	chmod g+rx $tmp_data_catalog
3489	if [[ $files_for_pes = false ]]
3490	then
3491	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3492	else
3493	mkdir $tmp_data_catalog/${frelout[$i]}
3494	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3495	fi
3496
3497	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3498	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3499	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3500	if [[ $files_for_pes = false ]]
3501	then
3502	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3503	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3504	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3505	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3506	else
3507	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3508	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3509	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3510	fi
3511
3512	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3513	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3514	file_saved=true
3515
3516	else
3517	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3518	archive_save=false
3519	fi
3520	if [[ $file_saved = true ]]
3521	then
3522	if [[ $files_for_pes = false ]]
3523	then
3524	cat /dev/null > ${pathout[$i]}
3525	else
3526	mkdir -p ${pathout[$i]}
3527	fi
3528	fi
3529	fi
3530
3531	# APPEND AUF LOKALER MASCHINE
3532	if [[ "${actionout[$i]}" = "a" ]]
3533	then
3534	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3535	cat ${localout[$i]} >> ${pathout[$i]}
3536	fi
3537
3538	# KOPIEREN AUF LOKALER MASCHINE
3539	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3540	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3541	then
3542
3543	# KOPIEREN AUF EINPROZESSORMASCHINE
3544	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3545	then
3546	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3547	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3548	else
3549	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3550	cp ${localout[$i]} ${pathout[$i]}
3551	fi
3552
3553	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3554	then
3555
3556	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3557	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3558	# WIRD DANN KOPIERT
3559	# PER MOVE UMBENANNT WERDEN
3560	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3561	cp -r ${localout[$i]} ${pathout[$i]}
3562
3563	fi
3564	fi
3565	done
3566	if (( i != 0 ))
3567	then
3568	if [[ $transfer_problems = true ]]
3569	then
3570	printf "\n$striche\n *** OUTPUT-files saved"
3571	printf "\n +++ WARNING: some data transfers failed! \n"
3572	else
3573	printf "\n$striche\n *** all OUTPUT-files saved \n"
3574	fi
3575	fi
3576
3577
3578	# EVENTUELL FOLGEJOB STARTEN
3579	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3580	if [[ -f CONTINUE_RUN ]]
3581	then
3582
3583	if [[ $archive_save = true ]]
3584	then
3585
3586	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3587	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3588	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3589	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3590	# HANDEN
3591	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3592	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3593	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3594	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3595	then
3596	mc=`echo $mc \| sed 's/#/f/g'`
3597	fi
3598
3599
3600	# JOB STARTEN
3601	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3602	echo " $mc"
3603	printf "\n$striche\n"
3604	if [[ $localhost != $fromhost ]]
3605	then
3606
3607	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3608	then
3609	echo "*** ssh will be used to initiate restart-runs!"
3610	echo " return_addres=\"$return_addres\" "
3611	echo " return_username=\"$return_username\" "
3612	if [[ $return_addres = 172.20.25.41 ]]
3613	then
3614	# WORKAROUND AUF SCIROCCO AM TIT
3615	print "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3616	else
3617	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3618	fi
3619	else
3620	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3621	locat=restart; exit
3622	fi
3623
3624	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3625	# DER AKTUELLE JOB ENDET
3626	sleep 30
3627
3628	else
3629
3630	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3631	# RUFEN WERDEN
3632	cd $LOCAL_PWD
3633	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3634	cd - > /dev/null
3635	fi
3636	printf "\n$striche\n *** restart-run initiated \n"
3637
3638
3639	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3640	# GEHOLT WORDEN SIND, LOESCHEN
3641	(( i = 0 ))
3642	while (( i < iin ))
3643	do
3644	(( i = i + 1 ))
3645	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3646	then
3647	rm -r $tmp_data_catalog/${frelin[$i]}
3648	fi
3649	done
3650
3651	else
3652
3653	printf "\n +++ no restart-run possible, since errors occured"
3654	printf "\n during the archive process"
3655	fi
3656
3657	fi
3658
3659
3660
3661	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3662	if [[ "$email_notification" != "" ]]
3663	then
3664
3665	if [[ $localhost != $fromhost ]]
3666	then
3667	if [[ -f CONTINUE_RUN ]]
3668	then
3669	echo "PALM restart run necessary" > email_text
3670	echo "description header of actual run:" >> email_text
3671	cat CONTINUE_RUN >> email_text
3672	echo "mrun-command to restart:" >> email_text
3673	echo "$mc" >> email_text
3674	else
3675	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3676	fi
3677	mail $email_notification < email_text
3678	printf "\n *** email notification sent to \"$email_notification\" "
3679	fi
3680	fi
3681
3682
3683
3684	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3685	cd $HOME
3686	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3687
3688	else
3689
3690
3691	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3692	# CHENDE AKTIONEN DURCHGEFUEHRT
3693
3694	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3695	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3696	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3697	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3698	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3699	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3700	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3701	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3702	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3703	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3704	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3705	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3706	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3707	if [[ $use_openmp = true ]]
3708	then
3709	mrun_com=${mrun_com}" -O"
3710	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3711	else
3712	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3713	fi
3714	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3715	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3716	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3717	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3718	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3719	if [[ $do_remote = true ]]
3720	then
3721	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3722	fi
3723
3724
3725	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3726	jobfile=jobfile.$RANDOM
3727
3728
3729	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3730	echo "mkdir $TEMPDIR" >> $jobfile
3731	echo "cd $TEMPDIR" >> $jobfile
3732
3733
3734	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3735	if [[ $do_trace = true ]]
3736	then
3737	echo "set -x" >> $jobfile
3738	else
3739	echo "set +vx" >> $jobfile
3740	fi
3741
3742
3743	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3744	# SOWIE GEGEBENENFALLS DES MAKEFILES
3745	if [[ $do_compile = true ]]
3746	then
3747
3748	source_catalog=SOURCES_FOR_RUN_$fname
3749
3750	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3751	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3752	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3753	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3754	echo "export SOURCES_COMPLETE=true" >> $jobfile
3755	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3756
3757	for filename in $source_list
3758	do
3759	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3760	echo "cat > $filename << \"%END%\"" >> $jobfile
3761	cat $source_catalog/$filename >> $jobfile
3762	echo " " >> $jobfile
3763	echo "%END%" >> $jobfile
3764	echo " " >> $jobfile
3765	done
3766
3767	if [[ "$use_makefile" = true ]]
3768	then
3769	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3770	echo "cat > Makefile << \"%END%\"" >> $jobfile
3771	cat $source_catalog/Makefile >> $jobfile
3772	echo " " >> $jobfile
3773	echo "%END%" >> $jobfile
3774	echo " " >> $jobfile
3775	fi
3776
3777	echo "cd - > /dev/null" >> $jobfile
3778
3779	fi
3780
3781
3782	# ABSPEICHERN DER KONFIGURATIONSDATEI
3783	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3784	echo "cat > $config_file << \"%END%\"" >> $jobfile
3785	cat $config_file >> $jobfile
3786	echo "%END%" >> $jobfile
3787	echo " " >> $jobfile
3788
3789
3790	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3791	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3792	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3793	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3794	echo "%END%" >> $jobfile
3795	if [[ $host = lctit ]]
3796	then
3797	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3798	echo "mv mrun_new $mrun_script_name" >> $jobfile
3799	fi
3800	echo "chmod u+x $mrun_script_name" >> $jobfile
3801	echo "execute_mrun=true" >> $jobfile
3802	echo " " >> $jobfile
3803
3804	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3805	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3806	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3807	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3808	if [[ $do_remote = true ]]
3809	then
3810	(( i = 0 ))
3811	while (( i < iin ))
3812	do
3813	(( i = i + 1 ))
3814	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3815	if [[ "${transin[$i]}" = job ]]
3816	then
3817	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3818	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3819	echo " " >> $jobfile
3820	echo "%END%" >> $jobfile
3821	else
3822	if [[ $filetransfer_protocol = ftp ]]
3823	then
3824	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3825	else
3826	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3827	fi
3828	fi
3829
3830	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3831	echo "if [[ \$? = 1 ]]" >> $jobfile
3832	echo "then" >> $jobfile
3833	echo " echo \" \" " >> $jobfile
3834	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3835	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3836	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3837	echo " execute_mrun=false" >> $jobfile
3838	echo "fi" >> $jobfile
3839	done
3840	fi
3841
3842	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3843	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3844	echo "LOCAL_PWD=$working_directory" >> $jobfile
3845	echo "export LOCAL_PWD" >> $jobfile
3846
3847	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3848	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3849	echo "export LOCAL_MRUN_PATH" >> $jobfile
3850
3851	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3852
3853	# MRUN AUF ZIELRECHNER AUFRUFEN
3854	echo "set -x" >> $jobfile
3855	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3856
3857	echo 'ls -al; echo `pwd`' >> $jobfile
3858	echo "cd \$HOME" >> $jobfile
3859	echo "rm -rf $TEMPDIR" >> $jobfile
3860
3861
3862
3863
3864	# JOB PER SUBJOB STARTEN
3865	if [[ $silent = false ]]
3866	then
3867	printf "\n "
3868	else
3869	printf "\n\n"
3870	fi
3871
3872	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3873	rm -rf $jobfile
3874
3875
3876	fi # ENDE REMOTE-TEIL
3877
3878
3879
3880	# ENDE DER PROZEDUR

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source: palm/trunk/SCRIPTS/mrun_new @ 22

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