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source: palm/trunk/SCRIPTS/mrun_new @ 21

Last change on this file since 21 was 21, checked in by raasch, 17 years ago
empty lines in configuration file are allowed
File size: 147.4 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 28/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109	# 14/02/07 - Siggi - dvrp support for neck added
110	# 28/02/07 - Siggi - empty lines in configuration file are accepted
111
112
113
114
115	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
116
117	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
118	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
119	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
120
121	AddFilenames=""
122	additional_conditions=""
123	add_source_path=""
124	afname=""
125	archive_save=true
126	archive_system=none
127	compiler_name=""
128	cond1=""
129	cond2=""
130	config_file=.mrun.config
131	cpp_opts=""
132	cpumax=0
133	cpurest=0
134	delete_temporary_catalog=true
135	do_batch=false
136	do_compile=true
137	do_remote=false
138	do_stagein=true
139	do_stageout=true
140	do_trace=false
141	email_notification=""
142	exclude=""
143	executable=""
144	execution_error=false
145	filetransfer_protocol=""
146	fname=test
147	fromhost=""
148	host=""
149	host_file=""
150	hp=""
151	ignore_archive_error=false
152	input_list=""
153	interpreted_config_file=""
154	job_on_file=""
155	keep_data_from_previous_run=false
156	localhost_realname=$(hostname)
157	local_compile=false
158	locat=normal
159	mainprog=""
160	makefile=""
161	mc=$0
162	while [[ $(echo $mc \| grep -c "/") != 0 ]]
163	do
164	mc=`echo $mc \| cut -f2- -d"/"`
165	done
166	module_files=""
167	MODULE_OPTIONS=""
168	mrun_script_name=$mc
169	netcdf_support=false
170	node_usage=default
171	numprocs=""
172	OOPT=""
173	openmp=false
174	output_list=""
175	package_list=""
176	punkte="..........................................................."
177	queue=none
178	read_from_config=""
179	restart_run=false
180	# return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
181	return_addres=130.75.105.2
182	if [[ $return_addres = 130.75.105.158 ]]
183	then
184	return_addres=172.20.25.41
185	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
186	fi
187	# if [[ $return_addres = 210.117.65.1 ]]
188	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
189	# then
190	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
191	# fi
192	return_password=""
193	return_username=$LOGNAME
194	remotecall=false
195	remote_username=""
196	run_mode=""
197	scirocco=false
198	store_on_archive_system=true
199	striche=" ----------------------------------------------------------------------------"
200	silent=false
201	source_list=""
202	source_path=SOURCE
203	tasks_per_node=""
204	threads_per_task=1
205	tmpcreate=false
206	tmp_data_catalog=""
207	transfer_problems=false
208	usern=$LOGNAME
209	use_makefile=""
210	working_directory=`pwd`
211	TOPT=""
212	XOPT=""
213	zeit=$( date \| cut -c 12-19 )
214
215	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
216	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
217
218	typeset -R40 calltime
219	typeset -L20 spalte1
220	typeset -L40 spalte2
221	typeset -L60 spalte3
222	typeset -L35 string1=`date`
223	typeset -L12 string2=$usern
224	typeset -L12 string3=$localhost_realname
225	typeset -L12 string4
226	typeset -L12 string5
227	typeset -L20 version="MRUN 1.8"
228
229
230
231	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
232	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
233
234	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
235	# EXPORTIERT WERDEN
236	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
237	export input_list memory numprocs output_list queue run_mode
238
239
240
241	# FEHLERBEHANDLUNG
242	# BEI EXIT:
243	trap 'if [[ $locat != localhost ]]
244	then
245	if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
246	then
247	cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
248	MRUN-calls on $localhost
249
250	date and time user localhost remotehost termination mrun-command
251	--------------------------------------------------------------------------------------------------------------------
252	%STATEND%
253	chmod 666 ${mrun_path}/statistik/mrun_statistik
254	fi
255
256	# EINTRAG IN DIE STATISTIK-DATEI
257	string4=$host
258	string5=$locat
259	if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
260	then
261	if [[ $do_batch = true ]]
262	then
263	printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
264	else
265	printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
266	fi
267	fi
268	fi
269
270	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
271	then
272
273	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
274	(( i = 0 ))
275	while (( i < iec ))
276	do
277	(( i = i + 1 ))
278	printf "\n *** Execution of ERROR-command:\n"
279	printf " >>> ${err_command[$i]}\n"
280	eval ${err_command[$i]}
281	done
282	if [[ -n $interpreted_config_file ]] then
283	rm -rf $interpreted_config_file
284	fi
285	if [[ $tmpcreate = true ]]
286	then
287	printf "\n *** Contents of \"$TEMPDIR\":\n"
288	ls -al; cd
289	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
290	fi
291	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
292	then
293	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
294	fi
295	printf "\n\n+++ MRUN killed \n\n"
296	elif [[ $locat != control_c ]]
297	then
298	printf "\n\n --> all actions finished\n\n"
299	printf " Bye, bye $usern !!\n\n"
300	fi' exit
301
302
303	# BEI TERMINAL-BREAK:
304	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
305	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
306	then
307	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
308	fi
309	printf "\n+++ MRUN killed by \"^C\" \n\n"
310	locat=control_c
311	exit
312	' 2
313
314
315	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
316	case $localhost_realname in
317	(atmos) mrun_path=/home/siggi/pub
318	localhost=lcide;;
319	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) mrun_path=/home/raasch/pub
320	localhost=lcmuk;;
321	(breg-en0\|berni-en0) mrun_path=/home/b/niksiraa/pub
322	localhost=ibmb; archive_system=tivoli;;
323	(cs*) mrun_path=/pf/b/b323011/pub
324	localhost=nech; archive_system=ut;;
325	(gate\|n-sx) mrun_path=/home/DSRC/NC/tatuyama/pub
326	PATH=$PATH:/usr/bin/nqsII:$mrun_path
327	localhost=neck;;
328	(ground.yonsei.ac.kr) mrun_path=/usr/users/raasch/pub
329	localhost=decalpha;;
330	(gfdl3.yonsei.ac.kr) mrun_path=/usr2/users/raasch/pub
331	localhost=decalpha;;
332	(gfdl5) mrun_path=/usr1/users/raasch/pub
333	localhost=ibmy;;
334	(gwdk081.gwdg.de\|gwdk082.gwdg.de\|gwdk083.gwdg.de) mrun_path=/usr/users/sraasch/pub
335	localhost=ibm;;
336	(hreg-en0\|hanni-en0) mrun_path=/home/h/niksiraa/pub
337	localhost=ibmh; archive_system=tivoli;;
338	(nobel*) mrun_path=/edun/z051nyg/pub
339	localhost=ibms;;
340	(sun1\|sun2) mrun_path=/home/nhbksira/pub/
341	localhost=unics;;
342	(tgg*) mrun_path=/home2/usr5/mkanda/pub
343	localhost=lctit;;
344	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
345	locat=localhost; exit;;
346	esac
347
348	[[ $localhost_realname = scirocco ]] && scirocco=true
349
350
351
352	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
353	# FUER FOLGEJOBS BENOETIGT WIRD
354	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
355	do
356	case $option in
357	(a) afname=$OPTARG;;
358	(A) store_on_archive_system=false; mc="$mc -A";;
359	(b) do_batch=true; mc="$mc -b";;
360	(B) delete_temporary_catalog=false; mc="$mc -B";;
361	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
362	(C) restart_run=true; mc="$mc -C";;
363	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
364	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
365	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
366	(F) job_on_file="-D"; mc="$mc -F";;
367	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
368	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
369	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
370	(I) ignore_archive_error=true; mc="$mc -I";;
371	(k) keep_data_from_previous_run=true; mc="$mc -k";;
372	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
373	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
374	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
375	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
376	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
377	(O) use_openmp=true; mc="$mc -O";;
378	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
379	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
380	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
381	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
382	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
383	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
384	(S) read_from_config=false; mc="$mc -S";;
385	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
386	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
387	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
388	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
389	(v) silent=true; mc="$mc -v";;
390	(x) do_trace=true;set -x; mc="$mc -x";;
391	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
392	(\?) printf "\n +++ unknown option $OPTARG \n"
393	printf "\n --> type \"$0 ?\" for available options \n"
394	locat=parameter;exit;;
395	esac
396	done
397
398
399	# EVTL. POSITIONSPARAMETER EINLESEN
400	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
401	shift OPTIND-1
402
403
404	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
405	if [[ "$1" = "?" ]]
406	then
407	(printf "\n *** mrun can be called as follows:\n"
408	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
409	printf "\n Description of available options:\n"
410	printf "\n Option Description Default-Value"
411	printf "\n -a base name of input files equiv. -d"
412	printf "\n -A no archiving when using file-attribute fl"
413	printf "\n -b batch-job on local machine ---"
414	printf "\n -B do not delete temporary directory at end ---"
415	printf "\n -c configuration file .mrun.config"
416	printf "\n -d base name of files attached to program test"
417	printf "\n -D preprocessor(cpp)-directives \"\" "
418	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
419	printf "\n -F create remote job file only ---"
420	printf "\n -h execution host $localhost_realname"
421	printf "\n -i INPUT control list \"\" "
422	printf "\n -I archiving errors of previous batch-jobs"
423	printf "\n will be ignored"
424	printf "\n -k keep data from previous run"
425	printf "\n -K additional conditions for controling"
426	printf "\n usage of conditional code and"
427	printf "\n env-variables in configuration file \"\" "
428	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
429	printf "\n -M Makefile name Makefile"
430	printf "\n -n node usage (shared/not_shared) depending on -h"
431	printf "\n -o OUTPUT control list \"\" "
432	printf "\n -O use OpenMP ---"
433	printf "\n -p software package list \"\" "
434	printf "\n -q queue \"$queue\" "
435	printf "\n -r run control list (combines -i -o) \"\" "
436	printf "\n -s filenames of routines to be compiled \"\" "
437	printf "\n must end with .f, .f90, .F, or .c !"
438	printf "\n use \"..\" for more than one file and wildcards"
439	printf "\n -s TEST compiles all files with w-permit"
440	printf "\n -S config file interpreted by shellscript ---"
441	printf "\n -t allowed cpu-time in seconds (batch) 0"
442	printf "\n -T tasks per node depending on -h"
443	printf "\n -u username on remote machine \"\" "
444	printf "\n -v no prompt for confirmation ---"
445	printf "\n -x tracing of mrun for debug purposes ---"
446	printf "\n -X # of processors (on parallel machines) 1"
447	printf "\n "
448	printf "\n Possible values of positional parameter <modus>:"
449	printf "\n \"?\" - this outline \n\n") \| more
450	exit
451	elif [[ "$1" != "" ]]
452	then
453	printf "\n +++ positional parameter $1 unknown \n"
454	locat=parameter; exit
455	fi
456
457
458
459	# KURZE STARTMELDUNG
460	printf "\n*** $version "
461	printf "\n will be executed. Please wait ..."
462
463
464	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
465	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
466	[[ "$afname" = "" ]] && afname=$fname
467
468
469	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
470	if [[ "$run_mode" != "" ]]
471	then
472	input_list="$input_list $run_mode"
473	output_list="$output_list $run_mode"
474	fi
475
476
477	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
478	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
479	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
480	# STARTET)
481	if [[ "$fromhost" = "" ]]
482	then
483	fromhost=$localhost
484	fi
485
486
487	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
488	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
489	then
490	source_list=TEST
491	local_compile=true
492	host=$localhost
493	fi
494
495
496	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
497	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
498	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
499	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
500	if [[ -n $host && "$host" != $localhost ]]
501	then
502	do_batch=true
503	do_remote=true
504	case $host in
505	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
506	(*) printf "\n"
507	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
508	printf "\n or NQS not available on execution host!"
509	locat=nqs; (( iec = 0 )); exit;;
510	esac
511	else
512	host=$localhost
513	fi
514
515
516	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
517	if [[ -n $additional_conditions ]]
518	then
519	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
520	# cond1=`echo $additional_conditions \| cut -d" " -f1`
521	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
522	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
523	if [[ -n $dummy ]]
524	then
525	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
526	locat=options; exit
527	fi
528	fi
529
530
531	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
532	# ARCHIVIERUNG FEHLGESCHLAGEN IST
533	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
534	then
535	if [[ $ignore_archive_error = false ]]
536	then
537	printf "\n +++ data archiving of previous run failed"
538	printf "\n see directory \~/job_queue on remote machine"
539	locat=archive; exit
540	else
541	printf "\n +++ warning: data archiving in a previous run failed"
542	printf "\n MRUN continues, trying to get backup copy"
543	fi
544	fi
545
546
547	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
548	if [[ ! -f $config_file ]]
549	then
550	printf "\n\n +++ configuration file: "
551	printf "\n $config_file"
552	printf "\n does not exist"
553	locat=connect; exit
554	fi
555
556
557
558	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
559	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
560	if [[ "$read_from_config" = false ]]
561	then
562
563	[[ $silent = false ]] && printf "\n Reading the configuration file... "
564	while read zeile
565	do
566	[[ $silent = false ]] && printf "."
567
568
569	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
570	# ERSETZEN
571	eval zeile=\"$zeile\"
572
573
574	# INTERPRETATION DER ZEILE
575	if [[ "$(echo $zeile)" = "" ]]
576	then
577	# LEERZEILE, KEINE AKTION
578	continue
579
580	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
581	then
582
583	# ZEILE IST KOMMENTARZEILE
584	true
585
586	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
587	then
588
589	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
590	zeile=$(echo $zeile \| cut -c2-)
591	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
592	# var=`echo $zeile \| cut -d" " -f1`
593	# value=`echo $zeile \| cut -d" " -s -f2`
594	# for_host=`echo $zeile \| cut -d" " -s -f3`
595	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
596	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
597
598	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
599	then
600
601	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
602	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
603	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
604
605
606	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
607	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
608	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
609	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
610	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
611	# KONFIGURATIONSDATEI
612	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
613	then
614	eval $var=\$value
615
616	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
617	if [[ $do_trace = true ]]
618	then
619	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
620	fi
621	fi
622
623	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
624	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
625	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
626	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
627	if [[ $var = host ]]
628	then
629	if [[ -n $host && "$host" != $localhost ]]
630	then
631	do_batch=true
632	do_remote=true
633	case $host in
634	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
635	(*) printf "\n +++ no queueing system available on execution host \"$host\""
636	locat=nqs; exit;;
637	esac
638	else
639	host=$localhost
640	fi
641	fi
642
643	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
644	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
645	# DEN PROGRAMMEN BENOETIGT WERDEN
646	export $var
647	fi
648
649
650
651
652	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
653	then
654
655	# ZEILE DEFINIERT ERROR-KOMMANDO
656	(( iec = iec + 1 ))
657	zeile=$(echo $zeile \| cut -c4-)
658	err_command[$iec]="$zeile"
659
660	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
661	then
662
663	# ZEILE DEFINIERT INPUT-KOMMANDO
664	(( iic = iic + 1 ))
665	zeile=$(echo $zeile \| cut -c4-)
666	in_command[$iic]="$zeile"
667
668	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
669	then
670
671	# ZEILE DEFINIERT OUTPUT-KOMMANDO
672	(( ioc = ioc + 1 ))
673	zeile=$(echo $zeile \| cut -c4-)
674	out_command[$ioc]="$zeile"
675
676	else
677
678	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
679	# s2a: in/out - Feld
680	# s2b: loc - Feld (optional)
681	# s2c: tr/ar - Feld (optional)
682	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
683	# s1=`echo $zeile \| cut -d" " -f1`
684	# s2=`echo $zeile \| cut -d" " -s -f2`
685	s2a=$(echo $s2 \| cut -d":" -f1)
686	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
687	then
688	s2b=""
689	s2c=""
690	else
691	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
692	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
693	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
694	fi
695	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
696	# s3=`echo $zeile \| cut -d" " -f3`
697	# s4=`echo $zeile \| cut -d" " -s -f4`
698	# s5=`echo $zeile \| cut -d" " -s -f5`
699	# s6=`echo $zeile \| cut -d" " -s -f6`
700
701
702	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
703	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
704	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
705	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
706	# HANDEN SEIN MUSS (D.H. s2b = loc)
707	IFSALT="$IFS"; IFS="$IFS:"
708	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
709	then
710	found=false
711	for actual in $input_list
712	do
713	for formal in $s3
714	do
715	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
716	done
717	done
718	if [[ $found = true ]]
719	then
720	(( iin = iin + 1 ))
721	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
722	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
723	extin[$iin]=$s6
724	fi
725	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
726	then
727	found=false
728	for actual in $output_list
729	do
730	for formal in $s3
731	do
732	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
733	done
734	done
735	if [[ $found = true ]]
736	then
737	(( iout = iout + 1 ))
738	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
739	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
740	fi
741	elif [[ "$s2a" != in && "$s2a" != out ]]
742	then
743	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
744	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
745	locat=connect; exit
746	fi
747	IFS="$IFSALT"
748	fi
749	done < $config_file
750
751	else
752
753
754	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
755	[[ $silent = false ]] && printf "..."
756	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
757	export interpreted_config_file=.icf.$RANDOM
758
759	case $localhost_realname in
760	(caurus\|twister) interpret_config.hp;;
761	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
762	(levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
763	(quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
764	(*) interpret_config.x;;
765	esac
766
767
768	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
769	chmod u+x $interpreted_config_file
770	export PATH=$PATH:.
771	. $interpreted_config_file
772	rm $interpreted_config_file
773
774	fi
775
776
777	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
778	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
779	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
780	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
781	if [[ "$SOURCES_COMPLETE" = "" ]]
782	then
783
784	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
785	# VEREINBART WURDE
786	source_path=""
787	line=""
788	grep "%source_path" $config_file > tmp_mrun
789	while read line
790	do
791	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
792	then
793	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
794	then
795	global_source_path=`echo $line \| cut -d" " -f2`
796	fi
797	fi
798	done < tmp_mrun
799
800	line=""
801	found=false
802	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
803	while read line
804	do
805	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
806	then
807	if [[ $found = true ]]
808	then
809	printf "\n\n +++ more than one source path found in configuration file"
810	printf "\n for local host \"$localhost\" "
811	locat=source_path; exit
812	fi
813	source_path=`echo $line \| cut -d" " -f2`
814	found=true
815	fi
816	done < tmp_mrun
817	rm tmp_mrun
818
819	if [[ "$source_path" = "" ]]
820	then
821	if [[ "$global_source_path" != "" ]]
822	then
823	source_path=$global_source_path
824	else
825	printf "\n\n +++ no source path found in configuration file"
826	printf "\n for local host \"$localhost\" "
827	locat=source_path; exit
828	fi
829	fi
830	eval source_path=$source_path
831
832	if [[ ! -d $source_path ]]
833	then
834	printf "\n\n +++ source path \"$source_path\" on local host"
835	printf "\n \"$localhost\" does not exist"
836	locat=source_path; exit
837	fi
838
839	fi
840
841
842
843	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
844	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
845	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
846	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
847	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
848	if [[ -n $host && "$host" != $localhost ]]
849	then
850	do_batch=true
851	do_remote=true
852	case $host in
853	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
854	(*) printf "\n"
855	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
856	printf "\n or no queueing system available on execution host!"
857	locat=nqs; (( iec = 0 )); exit;;
858	esac
859	else
860	host=$localhost
861	fi
862
863
864	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
865	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
866	then
867
868	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
869	if [[ ! -n $numprocs ]]
870	then
871	printf "\n"
872	printf "\n +++ option \"-K parallel\" requires additional specification"
873	printf "\n of the number of processors to be used by"
874	printf "\n mrun-option \"-X\" or by environment-variable"
875	printf "\n \"numprocs\" in the configuration file"
876	locat=numprocs; (( iec = 0 )); exit
877	fi
878
879	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
880	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
881	# GESAMTPROZESSORANZAHL IST
882	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
883	then
884	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
885	(( ival = $tasks_per_node ))
886	(( pes = numprocs ))
887	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
888	# then
889	# (( pes = pes - 1 ))
890	# fi
891	(( ii = pes / ival ))
892	if (( pes - ii * ival > 0 ))
893	then
894	printf "\n"
895	printf "\n +++ tasks per node (option \"-T\") must be an integral"
896	printf "\n divisor of the total number of processors (option \"-X\")"
897	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
898	locat=tasks_per_node; (( iec = 0 )); exit
899	fi
900	fi
901
902	# IBMY HAT NUR EINEN KNOTEN
903	if [[ $host = ibmy ]]
904	then
905	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
906	then
907	printf "\n"
908	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
909	printf "\n total number of processors (option \"-X\")"
910	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
911	locat=tasks_per_node; (( iec = 0 )); exit
912	fi
913	fi
914
915	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
916	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
917	if [[ $use_openmp = true ]]
918	then
919	threads_per_task=$tasks_per_node
920	tasks_per_node=1
921	fi
922	OOPT="-O $threads_per_task"
923	TOPT="-T $tasks_per_node"
924
925	# GESAMTZAHL DER KNOTEN BESTIMMEN
926	if [[ "$tasks_per_node" != "" ]]
927	then
928	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
929	fi
930
931	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
932	# SETZEN
933	if [[ $node_usage = default ]]
934	then
935	if [[ $host = ibms ]]
936	then
937	node_usage=shared
938	else
939	node_usage=not_shared
940	fi
941	fi
942	if [[ $node_usage != shared && $node_usage != not_shared ]]
943	then
944	printf "\n"
945	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
946	printf "\n \"shared\" or \"not_shared\""
947	locat=tasks_per_node; (( iec = 0 )); exit
948	fi
949
950	fi
951
952	# PRUEFEN, OB HOSTFILE EXISTIERT
953	if [[ -n $hostfile ]]
954	then
955	if [[ ! -f $hostfile ]]
956	then
957	printf "\n"
958	printf "\n +++ hostfile \"$hostfile\" does not exist"
959	locat=hostfile; exit
960	fi
961	fi
962
963	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
964	if [[ $host = ibmy && $do_remote = false ]]
965	then
966	if [[ ! -f $HOME/.rhosts ]]
967	then
968	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
969	printf "\n\n *** file:"
970	printf "\n $HOME/.rhosts"
971	printf "\n was created\n"
972	fi
973	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
974	then
975	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
976	printf "\n\n *** file:"
977	printf "\n $HOME/.rhosts"
978	printf "\n was extended by the name of the current host\n"
979	fi
980	fi
981
982	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
983	if [[ "$filetransfer_protocol" = "" ]]
984	then
985	case $host in
986	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
987	(*) filetransfer_protocol=ftp;;
988	esac
989	fi
990
991	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
992	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
993	then
994	printf "\n"
995	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
996	printf "\n only \"ftp\" or \"scp\" are allowed"
997	locat=options; exit
998	fi
999
1000
1001	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1002	if [[ $queue = none ]]
1003	then
1004	case $host in
1005	(ibmb) if [[ $node_usage = shared ]]
1006	then
1007	queue=cshare
1008	else
1009	queue=csolo
1010	fi;;
1011	(ibmh) if [[ $node_usage = shared ]]
1012	then
1013	queue=cshare
1014	else
1015	queue=csolo
1016	fi;;
1017	(ibmy) queue=parallel;;
1018	(lctit) queue=default;;
1019	(nech) queue=none;;
1020	(neck) queue=P;;
1021	(unics) queue=unics;;
1022	esac
1023	fi
1024
1025
1026	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1027	case $host in
1028	(decalpha) netcdf_support=true
1029	netcdf_path=/usr/local/netcdf-3.5.1;;
1030	(ibmb\|ibmh) netcdf_support=true
1031	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1032	(ibms) netcdf_support=true
1033	netcdf_path=/applic/lib/NETCDF64;;
1034	(ibmy) netcdf_support=true
1035	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1036	(lcmuk) netcdf_support=true
1037	if [[ $scirocco = true ]]
1038	then
1039	netcdf_path=/opt/netcdf/3.6.2-beta4
1040	else
1041	netcdf_path=/muksoft/packages/netcdf/linux
1042	fi;;
1043	(lctit) netcdf_support=true
1044	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1045	(nech) netcdf_support=true
1046	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1047	(neck) netcdf_support=true
1048	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1049	esac
1050
1051
1052	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1053	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1054	# ERMITTELN
1055	(( i = 0 ))
1056	while (( i < iin ))
1057	do
1058	(( i = i + 1 ))
1059	(( maxcycle = 0 ))
1060
1061	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1062	if [[ "${actionin[$i]}" = di ]]
1063	then
1064	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1065	# REM-MASCHINE AUSWERTEN
1066	eval filename=${pathin[$i]}/${endin[$i]}
1067	else
1068	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1069	# REM-MASCHINE AUSWERTEN
1070	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1071	fi
1072
1073	# PRUEFEN AUF VORHANDENSEIN
1074	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1075	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1076	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1077	then
1078	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1079	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1080	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1081	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1082	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1083	if [[ "${transin[$i]}" != "locopt" ]]
1084	then
1085	printf "\n\n +++ INPUT-file: "
1086	if [[ "${extin[$i]}" = "" ]]
1087	then
1088	printf "\n $filename"
1089	else
1090	printf "\n $filename.${extin[$i]}"
1091	fi
1092	printf "\n does not exist\n"
1093	locat=input; exit
1094	else
1095	transin[$i]="unavailable"
1096	fi
1097	else
1098
1099	# ZYKLUSNUMMER FESTSTELLEN
1100	ls -1 -d $filename > filelist 2>/dev/null
1101	ls -1 -d $filename.* >> filelist 2>/dev/null
1102	while read zeile
1103	do
1104	cycle=$(print $zeile \| cut -f2 -d".")
1105	if [[ "$cycle" = "$zeile" ]]
1106	then
1107	(( icycle = 0 ))
1108	elif [[ "$cycle" = "${extin[$i]}" ]]
1109	then
1110	(( icycle = 0 ))
1111	else
1112	(( icycle = $cycle ))
1113	fi
1114	if (( icycle > maxcycle ))
1115	then
1116	(( maxcycle = icycle ))
1117	file_to_be_used=$zeile
1118	fi
1119	done <filelist
1120	rm filelist
1121
1122	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1123	if (( maxcycle > 0 ))
1124	then
1125	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1126	then
1127	filename=${filename}.$maxcycle.${extin[$i]}
1128	else
1129	filename=${filename}.$maxcycle
1130	fi
1131	else
1132	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1133	then
1134	filename=${filename}.${extin[$i]}
1135	fi
1136	fi
1137
1138	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1139	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1140	absnamein[$i]=$filename
1141	if (( maxcycle > 0 ))
1142	then
1143	if [[ "${actionin[$i]}" = di ]]
1144	then
1145	frelin[$i]=${endin[$i]}.$maxcycle
1146	else
1147	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1148	fi
1149	else
1150	if [[ "${actionin[$i]}" = di ]]
1151	then
1152	frelin[$i]=${endin[$i]}
1153	else
1154	frelin[$i]=${afname}${endin[$i]}
1155	fi
1156	fi
1157
1158	fi
1159	done
1160
1161
1162	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1163	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1164	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1165	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1166	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1167	(( i = 0 ))
1168	while (( i < iout ))
1169	do
1170	(( i = i + 1 ))
1171	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1172	then
1173	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1174	then
1175	actionout[$i]=""
1176	elif [[ "${actionout[$i]}" = tra ]]
1177	then
1178	actionout[$i]=a
1179	fi
1180	(( maxcycle = 0 ))
1181	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1182	eval catalogname=${pathout[$i]}
1183	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1184	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1185	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1186	then
1187
1188	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1189	if cat /dev/null > $filename
1190	then
1191	rm $filename
1192	else
1193
1194	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1195	if [[ ! -d $catalogname ]]
1196	then
1197	if mkdir -p $catalogname
1198	then
1199	printf "\n\n *** directory:"
1200	printf "\n $catalogname"
1201	printf "\n was created\n"
1202	else
1203	printf "\n\n +++ OUTPUT-file:"
1204	printf "\n $filename"
1205	printf "\n cannot be created, because directory does not exist"
1206	printf "\n and cannot be created either"
1207	printf "\n"
1208	locat=output ; exit
1209	fi 2>/dev/null
1210	else
1211	printf "\n\n +++ OUTPUT-file:"
1212	printf "\n $filename"
1213	printf "\n cannot be created, although directory exists"
1214	printf "\n"
1215	locat=output ; exit
1216	fi
1217	fi 2>/dev/null
1218	else
1219
1220	# ZYKLUSNUMMER FESTSTELLEN
1221	ls -1 -d $filename > filelist 2>/dev/null
1222	ls -1 -d $filename.* >> filelist 2>/dev/null
1223	while read zeile
1224	do
1225	cycle=$(print $zeile \| cut -f2 -d".")
1226	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1227	then
1228	(( icycle = 1 ))
1229	else
1230	(( icycle = $cycle + 1 ))
1231	fi
1232	if (( icycle > maxcycle ))
1233	then
1234	(( maxcycle = icycle ))
1235	fi
1236	done <filelist
1237	rm filelist
1238	fi
1239
1240	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1241	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1242	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1243	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1244	if [[ "${actionout[$i]}" != a ]]
1245	then
1246	if (( maxcycle > 0 ))
1247	then
1248	filename=${filename}.$maxcycle
1249	if cat /dev/null > $filename
1250	then
1251	rm $filename
1252	else
1253	printf "\n +++ OUTPUT-file:"
1254	printf "\n $filename"
1255	printf "\n cannot be created"
1256	locat=output ; exit
1257	fi
1258	fi
1259	else
1260	(( maxcycle = maxcycle - 1 ))
1261	if (( maxcycle > 0 ))
1262	then
1263	filename=${filename}.$maxcycle
1264	fi
1265	fi
1266
1267	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1268	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1269	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1270	pathout[$i]=$filename
1271	if (( maxcycle > 0 ))
1272	then
1273	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1274	else
1275	frelout[$i]=${fname}${endout[$i]}
1276	fi
1277
1278	fi
1279	done
1280
1281
1282	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1283	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1284	# UEBERSETZT ZU WERDEN)
1285	if [[ "$mainprog" = "" && "$executable" = "" ]]
1286	then
1287	printf "\n +++ neither main program nor executable defined"
1288	locat=source; exit
1289	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1290	then
1291	printf "\n +++ main program as well as executable defined"
1292	locat=source; exit
1293	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1294	then
1295	do_compile=false
1296	fi
1297
1298
1299	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1300	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1301	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1302	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1303	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1304	then
1305
1306	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1307	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1308
1309	if [[ $restart_run != true ]]
1310	then
1311	rm -rf SOURCES_FOR_RUN_$fname
1312	mkdir SOURCES_FOR_RUN_$fname
1313	fi
1314
1315
1316	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1317	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1318	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1319	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1320	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1321	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1322	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1323	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1324	# GESAMMELT
1325	if [[ "$source_list" = WRITE_PERMIT ]]
1326	then
1327
1328	source_list=""
1329	cd $source_path
1330
1331
1332	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1333	Names=$(ls -1 *.f90 2>&1)
1334	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1335	Names=$(ls -1 *.F90 2>&1)
1336	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1337	Names=$(ls -1 *.F 2>&1)
1338	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1339	Names=$(ls -1 *.f 2>&1)
1340	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1341	Names=$(ls -1 *.c 2>&1)
1342	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1343
1344
1345	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1346	for dateiname in $Filenames
1347	do
1348	if [[ -w $dateiname ]]
1349	then
1350	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1351	then
1352	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1353	source_list=$source_list"$dateiname "
1354	fi
1355	fi
1356	done
1357
1358	cd - > /dev/null
1359
1360
1361	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1362	then
1363
1364	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1365	source_list=""
1366	cd $source_path
1367
1368
1369	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1370	if [[ ! -d .svn ]]
1371	then
1372	printf "\n\n +++ source directory"
1373	printf "\n \"$source_path\" "
1374	printf "\n is not under control of \"subversion\"."
1375	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1376	fi
1377
1378
1379	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1380	Filenames=""
1381	svn status \| while read line
1382	do
1383	firstc=`echo $line \| cut -c1`
1384	if [[ $firstc = M \|\| $firstc = "?" ]]
1385	then
1386	Name=`echo "$line" \| cut -c8-`
1387	extension=`echo $Name \| cut -d. -f2`
1388	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1389	then
1390	Filenames="$Filenames "$Name
1391	fi
1392	fi
1393	done
1394
1395
1396	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1397	for dateiname in $Filenames
1398	do
1399	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1400	source_list=$source_list"$dateiname "
1401	done
1402
1403	cd - > /dev/null
1404
1405
1406	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1407	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1408	# VORHANDEN
1409	elif [[ "$source_list" != "" && $restart_run != true ]]
1410	then
1411
1412	cd $source_path
1413
1414	for filename in $source_list
1415	do
1416
1417	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1418	if [[ $(print $filename \| grep -c "/") != 0 ]]
1419	then
1420	printf "\n +++ source code file: $filename"
1421	printf "\n must not contain (\"/\") "
1422	locat=source; exit
1423	fi
1424
1425	if [[ ! -f $filename ]]
1426	then
1427	printf "\n +++ source code file: $filename"
1428	printf "\n does not exist"
1429	locat=source; exit
1430	else
1431	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1432	fi
1433
1434	done
1435
1436	cd - > /dev/null
1437
1438	fi
1439
1440
1441	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1442	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1443	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1444	if [[ $restart_run != true ]]
1445	then
1446
1447	if [[ ! -f "$source_path/$mainprog" ]]
1448	then
1449	printf "\n\n +++ main program: $mainprog"
1450	printf "\n does not exist in source directory"
1451	printf "\n \"$source_path\"\n"
1452	locat=source; exit
1453	else
1454	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1455	then
1456	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1457	source_list=${mainprog}" $source_list"
1458	fi
1459	fi
1460	fi
1461
1462
1463	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1464	if [[ $restart_run != true && "$add_source_path" != "" ]]
1465	then
1466
1467	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1468	if [[ ! -d $add_source_path ]]
1469	then
1470	printf "\n\n +++ WARNING: additional source code directory"
1471	printf "\n \"$add_source_path\" "
1472	printf "\n does not exist or is not a directory."
1473	printf "\n No source code will be used from this directory!\n"
1474	add_source_path=""
1475	sleep 3
1476	else
1477
1478	cd $add_source_path
1479
1480	Names=$(ls -1 *.f90 2>&1)
1481	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1482	Names=$(ls -1 *.F90 2>&1)
1483	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1484	Names=$(ls -1 *.F 2>&1)
1485	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1486	Names=$(ls -1 *.f 2>&1)
1487	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1488	Names=$(ls -1 *.c 2>&1)
1489	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1490
1491	cd - > /dev/null
1492	cd SOURCES_FOR_RUN_$fname
1493
1494	for dateiname in $AddFilenames
1495	do
1496	if [[ -f $dateiname ]]
1497	then
1498	printf "\n +++ source code file \"$dateiname\" found in additional"
1499	printf "\n source code directory \"$add_source_path\" "
1500	printf "\n as well as in directory \"$source_path\"."
1501	locat=source; exit
1502	fi
1503
1504	cp $add_source_path/$dateiname .
1505	source_list="$source_list $dateiname"
1506
1507	# Default User-Interface von der Liste entfernen, falls Datei
1508	# ein User-Interface enthaelt
1509	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1510	then
1511	if [[ -f user_interface.f90 ]]
1512	then
1513	rm -rf user_interface.f90
1514	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1515	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1516	printf "\n since a user-interface is found in file"
1517	printf "\n \"$add_source_path/$dateiname\" \n"
1518	sleep 3
1519	else
1520	printf "\n\n *** user-interface file \"$dateiname\" "
1521	printf "\n added to the files to be translated \n"
1522	sleep 3
1523	fi
1524	fi
1525	done
1526
1527	cd - > /dev/null
1528	fi
1529	fi
1530
1531
1532	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1533	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1534	if [[ $restart_run != true && -n $package_list ]]
1535	then
1536
1537	cd $source_path
1538
1539	for package in $package_list
1540	do
1541
1542	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1543
1544	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1545	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1546	# LIEFERT
1547	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1548
1549
1550	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1551	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1552	for source_list_name in $package_source_list
1553	do
1554	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1555	then
1556
1557	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1558	ending=`echo $source_list_name \| cut -f2 -d.`
1559	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1560	then
1561	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1562	source_list="$source_list $source_list_name"
1563	fi
1564	fi
1565	done
1566	done
1567
1568	cd - > /dev/null
1569	fi
1570
1571
1572	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1573	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1574	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1575	then
1576	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1577	if [[ ! -f $makefile ]]
1578	then
1579	printf "\n +++ file \"$makefile\" does not exist"
1580	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1581	locat=make; exit
1582	else
1583	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1584	fi
1585	fi
1586
1587	fi # do_compile=true
1588
1589
1590	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1591	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1592	if [[ $do_compile = true ]]
1593	then
1594
1595	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1596	# ZUSAMMENSETZEN
1597	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1598	then
1599	PPOPTS=-Dibm=ibm
1600	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1601	then
1602	PPOPTS=-Dnec
1603	else
1604	PPOPTS=-D$localhost
1605	fi
1606	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1607	then
1608	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1609	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1610	if [[ $netcdf_support = true ]]
1611	then
1612	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1613	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1614	fi
1615	if [[ $localhost = ibmy ]]
1616	then
1617	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1618	fi
1619	else
1620	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1621	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1622	if [[ $netcdf_support = true ]]
1623	then
1624	PPOPTS="$PPOPTS -Dnetcdf"
1625	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1626	fi
1627	fi
1628	if [[ -n $package_list ]]
1629	then
1630	for package in $package_list
1631	do
1632	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1633	then
1634	if [[ $package != "dvrp_graphics+1PE" ]]
1635	then
1636	PPOPTS="$PPOPTS -D$package=$package"
1637	else
1638	PPOPTS="$PPOPTS -Ddvrp_graphics"
1639	export use_seperate_pe_for_dvrp_output=true
1640	fi
1641	else
1642	if [[ $package != "dvrp_graphics+1PE" ]]
1643	then
1644	PPOPTS="$PPOPTS -D$package"
1645	else
1646	PPOPTS="$PPOPTS -Ddvrp_graphics"
1647	export use_seperate_pe_for_dvrp_output=true
1648	fi
1649	fi
1650	done
1651	fi
1652	if [[ -n $cpp_opts ]]
1653	then
1654	for popts in $cpp_opts
1655	do
1656	PPOPTS="$PPOPTS -D$popts"
1657	done
1658	fi
1659
1660	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1661	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1662
1663	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1664	if [[ $host = decalpha ]]
1665	then
1666	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1667	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1668	then
1669	# blanks in PPOPTS muessen durch "," ersetzt werden
1670	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1671	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1672	elif [[ $host = lcmuk ]]
1673	then
1674	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1675	elif [[ $host = lctit ]]
1676	then
1677	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1678	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1679	then
1680	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1681	else
1682	C_PPOPTS="$PPOPTS"
1683	fi
1684
1685	else
1686
1687
1688	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1689	if [[ $do_remote = false ]]
1690	then
1691	if [[ ! -f $executable ]]
1692	then
1693	printf "\n +++ executable file: $executable"
1694	printf "\n does not exist"
1695	locat=executable; exit
1696	fi
1697	fi
1698	fi
1699
1700
1701	# JOBMODUS FESTSTELLEN
1702	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1703	then
1704	jobmo=BATCH
1705	else
1706	jobmo=INTERACTIVE
1707	fi
1708
1709
1710	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1711	# DURCH BENUTZER ANDERWEITIG VEREINBART
1712	if [[ "$compiler_name" = "" ]]
1713	then
1714	case $localhost in
1715	(unics) compiler_name=f77;;
1716	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1717	then
1718	compiler_name=mpif90
1719	else
1720	compiler_name=ifc
1721	fi;;
1722	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1723	then
1724	compiler_name=mpif90
1725	echo ">>> compiler=mpif90"
1726	else
1727	compiler_name=pgf95
1728	echo ">>> compiler=pgf95"
1729	fi;;
1730	(nech) compiler_name=sxmpif90;;
1731	(decalpha) compiler_name=f95;;
1732	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1733	(*) printf "\n +++ unknown host name: $localhost \n";
1734	locat=localhost; exit;;
1735	esac
1736	fi
1737
1738
1739	# COMPILER AUF NECK UEBERSCHREIBEN
1740	[[ $localhost = neck ]] && compiler_name=mpif90
1741
1742
1743
1744	# PRAEPROZESSOR-PFAD BESTIMMEN
1745	case $localhost in
1746	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1747	esac
1748
1749
1750	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1751	kennung=$RANDOM
1752	if [[ "$tmp_user_catalog" = "" ]]
1753	then
1754	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1755	then
1756	tmp_user_catalog=$TMPDIR
1757	elif [[ $localhost = nech ]]
1758	then
1759	tmp_user_catalog=$WRKSHR
1760	else
1761	tmp_user_catalog=/tmp
1762	fi
1763	fi
1764	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1765
1766
1767	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1768	# BESTIMMEN
1769	if [[ "$tmp_data_catalog" = "" ]]
1770	then
1771	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1772	then
1773	tmp_data_catalog=$WORK/mrun_restart_data
1774	elif [[ $localhost = nech ]]
1775	then
1776	tmp_data_catalog=$WRKSHR/mrun_restart_data
1777	else
1778	tmp_data_catalog=/tmp/mrun_restart_data
1779	fi
1780	fi
1781
1782
1783	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1784	# ERSETZEN
1785	if [[ $do_remote = false && $do_compile = true ]]
1786	then
1787	eval fopts=\"$fopts\"
1788	eval lopts=\"$lopts\"
1789	fi
1790
1791
1792
1793	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1794	FOPTS="$fopts"
1795	LOPTS="$lopts"
1796	ROPTS="$ropts"
1797	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1798	then
1799	XOPT="-X $numprocs"
1800	fi
1801
1802
1803	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1804	# MIT EINGEBUNDEN WERDEN
1805	if [[ -n $package_list ]]
1806	then
1807	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1808	then
1809
1810	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1811	# DEM NOTEBOOK SCIROCCO
1812	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1813	then
1814	printf "\n"
1815	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1816	locat=parameter; exit
1817	fi
1818	if [[ $host = ibmh ]]
1819	then
1820	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1821	then
1822	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1823	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1824	else
1825	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1826	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1827	fi
1828	elif [[ $host = nech ]]
1829	then
1830	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1831	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1832	elif [[ $host = neck ]]
1833	then
1834	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1835	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1836	elif [[ $host = lcmuk ]]
1837	then
1838	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1839	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1840	fi
1841	fi
1842	fi
1843
1844
1845	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1846	if [[ $netcdf_support = true ]]
1847	then
1848	case $host in
1849	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1850	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1851	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1852	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1853	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1854	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1855	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1856	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1857	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1858	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1859	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1860	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1861
1862	esac
1863	fi
1864
1865	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1866	# GRAMM BENOETIGT
1867	done=false
1868	while [[ $done = false ]]
1869	do
1870	cputime=$cpumax
1871	if (( $cputime == 0 ))
1872	then
1873	printf "\n +++ cpu-time is undefined"
1874	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1875	printf "\n >>> "
1876	read cputime 1>/dev/null 2>&1
1877	else
1878	done=true
1879	fi
1880	cpumax=$cputime
1881	done
1882
1883	(( minuten = cputime / 60 ))
1884	(( sekunden = cputime - minuten * 60 ))
1885
1886
1887	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1888	if [[ $do_batch = true ]]
1889	then
1890	done=false
1891	while [[ $done = false ]]
1892	do
1893	if (( memory == 0 ))
1894	then
1895	printf "\n +++ memory demand is undefined"
1896	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1897	printf "\n >>> "
1898	read memory 1>/dev/null 2>&1
1899	else
1900	done=true
1901	fi
1902	done
1903	fi
1904
1905
1906	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1907	if [[ $do_remote = true && -z $remote_username ]]
1908	then
1909	while [[ -z $remote_username ]]
1910	do
1911	printf "\n +++ username on remote host \"$host\" is undefined"
1912	printf "\n >>> Please type username:"
1913	printf "\n >>> "
1914	read remote_username
1915	done
1916	mc="$mc -u$remote_username"
1917	fi
1918
1919	###########################################################################
1920	# HEADER-AUSGABE
1921	###########################################################################
1922
1923
1924	calltime=$(date)
1925	printf "\n"
1926	# [[ $silent = false ]] && clear
1927	printf "#--------------------------------------------------------------# \n"
1928	printf "\| $version$calltime \| \n"
1929	printf "\| \| \n"
1930	spalte1="called on:"; spalte2=$localhost_realname
1931	printf "\| $spalte1$spalte2 \| \n"
1932	if [[ $local_compile = false ]]
1933	then
1934	if [[ $do_remote = true ]]
1935	then
1936	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1937	else
1938	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1939	fi
1940	else
1941	spalte1="compiling test only!"; spalte2=""
1942	fi
1943	printf "\| $spalte1$spalte2 \| \n"
1944	if [[ -n $numprocs ]]
1945	then
1946	spalte1="number of PEs:"; spalte2=$numprocs
1947	printf "\| $spalte1$spalte2 \| \n"
1948	fi
1949	if [[ -n $tasks_per_node ]]
1950	then
1951	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1952	printf "\| $spalte1$spalte2 \| \n"
1953	fi
1954	if [[ $threads_per_task != 1 ]]
1955	then
1956	spalte1="threads per task:"; spalte2="$threads_per_task"
1957	printf "\| $spalte1$spalte2 \| \n"
1958	fi
1959	printf "\| \| \n"
1960	if [[ $do_compile = true ]]
1961	then
1962	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1963	printf "\| $spalte1$spalte2 \| \n"
1964	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1965	while [[ "$zeile" != "" ]]
1966	do
1967	spalte1=""
1968	spalte2=$zeile
1969	printf "\| $spalte1$spalte2 \| \n"
1970	zeile=$(echo "$zeile" \| cut -c41-)
1971	done
1972
1973	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1974	printf "\| $spalte1$spalte2 \| \n"
1975	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1976	while [[ "$zeile" != "" ]]
1977	do
1978	spalte1=""
1979	spalte2=$zeile
1980	printf "\| $spalte1$spalte2 \| \n"
1981	zeile=$(echo "$zeile" \| cut -c41-)
1982	done
1983
1984	spalte1=linker-options:; spalte2=$LOPTS
1985	printf "\| $spalte1$spalte2 \| \n"
1986	zeile=$(echo "$LOPTS" \| cut -c41-)
1987	while [[ "$zeile" != "" ]]
1988	do
1989	spalte1=""
1990	spalte2=$zeile
1991	printf "\| $spalte1$spalte2 \| \n"
1992	zeile=$(echo "$zeile" \| cut -c41-)
1993	done
1994
1995	spalte1="main program":; spalte2=$mainprog
1996	printf "\| $spalte1$spalte2 \| \n"
1997	if [[ "$use_makefile" = true ]]
1998	then
1999	spalte1="using \"make\" for com"; spalte2="piling and linking"
2000	printf "\| $spalte1$spalte2 \| \n"
2001	fi
2002	# if [[ $vtk_graphics = true ]]
2003	# then
2004	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2005	# printf "\| $spalte1$spalte2 \| \n"
2006	# fi
2007	else
2008	spalte1=executable:; spalte2=$executable
2009	printf "\| $spalte1$spalte2 \| \n"
2010	fi
2011	printf "\| \| \n"
2012	spalte1="base name of files":; spalte2=$fname
2013	printf "\| $spalte1$spalte2 \| \n"
2014	if [[ $fname != $afname ]]
2015	then
2016	spalte1="base name of input files":; spalte2=$afname
2017	printf "\| $spalte1$spalte2 \| \n"
2018	fi
2019	spalte1="INPUT control list":; spalte2=$input_list
2020	printf "\| $spalte1$spalte2 \| \n"
2021	spalte1="OUTPUT control list":; spalte2=$output_list
2022	printf "\| $spalte1$spalte2 \| \n"
2023
2024	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2025	then
2026	spalte1="memory demand / PE":; spalte2="$memory MB"
2027	printf "\| $spalte1$spalte2 \| \n"
2028	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2029	printf "\| $spalte1$spalte2 \| \n"
2030	fi
2031
2032	if [[ $do_compile = true ]]
2033	then
2034	printf "\| \| \n"
2035	printf "\| Files to be compiled: \| \n"
2036	zeile=$source_list
2037	while [[ "$zeile" != "" ]]
2038	do
2039	spalte3=$zeile
2040	printf "\| $spalte3 \| \n"
2041	zeile=$(echo "$zeile" \| cut -c61-)
2042	done
2043	fi
2044	printf "#--------------------------------------------------------------#"
2045
2046
2047
2048	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2049	if [[ $do_trace = true ]]
2050	then
2051	(( i = 0 ))
2052	while (( i < iin ))
2053	do
2054	(( i = i + 1 ))
2055	if (( i == 1 ))
2056	then
2057	printf "\n\n >>> INPUT-file assignments:\n"
2058	fi
2059	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2060	done
2061	(( i = 0 ))
2062	while (( i < iout ))
2063	do
2064	(( i = i + 1 ))
2065	if (( i == 1 ))
2066	then
2067	printf "\n\n >>> OUTPUT-file assignments:\n"
2068	fi
2069	printf "\n ${localout[$i]} : ${pathout[$i]}"
2070	done
2071	(( i = 0 ))
2072	while (( i < iic ))
2073	do
2074	(( i = i + 1 ))
2075	if (( i == 1 ))
2076	then
2077	printf "\n\n >>> INPUT-commands:\n"
2078	fi
2079	printf "\n ${in_command[$i]}"
2080	done
2081	(( i = 0 ))
2082	while (( i < ioc ))
2083	do
2084	(( i = i + 1 ))
2085	if (( i == 1 ))
2086	then
2087	printf "\n\n >>> OUTPUT-commands:\n"
2088	fi
2089	printf "\n ${out_command[$i]}"
2090	done
2091	fi
2092
2093
2094	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2095	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2096	then
2097	antwort=dummy
2098	printf "\n\n"
2099	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2100	do
2101	printf " >>> everything o.k. (y/n) ? "
2102	read antwort
2103	done
2104	if [[ $antwort = n \|\| $antwort = N ]]
2105	then
2106	locat=user_abort; (( iec = 0 )); exit
2107	fi
2108	if [[ $do_batch = true ]]
2109	then
2110	printf " >>> batch-job will be created and submitted"
2111	else
2112	if [[ $local_compile = false ]]
2113	then
2114	printf " >>> MRUN will now continue to execute on this machine"
2115	else
2116	printf " >>> a test compilation will now be carried out on this machine"
2117	fi
2118	fi
2119	fi
2120
2121
2122
2123
2124	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2125	# CHENDE AKTIONEN DURCHGEFUEHRT
2126	if [[ $do_batch = false ]]
2127	then
2128
2129
2130	# TEMPORAEREN KATALOG ERZEUGEN
2131	mkdir -p $TEMPDIR
2132	chmod go+rx $TEMPDIR
2133	tmpcreate=true
2134
2135
2136	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2137	# TEMPORAERES VERZEICHNIS KOPIEREN
2138	if [[ $do_compile = true ]]
2139	then
2140
2141	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2142	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2143	if [[ $localhost = nech ]]
2144	then
2145	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2146	if mkdir -p $TEMPDIR_COMPILE
2147	then
2148	printf "\n *** \"$TEMPDIR_COMPILE\" "
2149	printf "\n is generated as temporary directory for cross compiling\n"
2150	else
2151	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2152	printf "\n needed for cross compilation failed"
2153	locat=compile
2154	exit
2155	fi
2156	else
2157	TEMPDIR_COMPILE=$TEMPDIR
2158	fi
2159
2160	if [[ "$use_makefile" = true ]]
2161	then
2162
2163	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2164	line=""
2165	grep "%depository_path" $config_file \| while read line
2166	do
2167	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2168	then
2169	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2170	then
2171	global_depository_path=`echo $line \| cut -d" " -s -f2`
2172	fi
2173	fi
2174	done
2175
2176	line=""
2177	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2178	do
2179	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2180	then
2181	local_depository_path=`echo $line \| cut -d" " -s -f2`
2182	fi
2183	done
2184
2185	if [[ "$local_depository_path" = "" ]]
2186	then
2187	if [[ "$global_depository_path" != "" ]]
2188	then
2189	local_depository_path=$global_depository_path
2190	else
2191	printf "\n\n +++ no depository path found in configuration file"
2192	printf "\n for local host \"$localhost\" "
2193	printf "\n please set \"\%depository_path\" in configuration file\n"
2194	locat=config_file; exit
2195	fi
2196	fi
2197	eval local_depository_path=$local_depository_path
2198
2199	basename=`print $mainprog \| cut -f1 -d"."`
2200	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2201	if [[ ! -f $make_depository ]]
2202	then
2203	printf "\n"
2204	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2205	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2206	else
2207	cp $make_depository $TEMPDIR_COMPILE
2208	cd $TEMPDIR_COMPILE
2209	tar -xf $make_depository > /dev/null 2>&1
2210	cd - > /dev/null
2211	fi
2212
2213	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2214
2215	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2216	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2217	# MAKEFILE EINTRAGEN
2218	cd $TEMPDIR_COMPILE
2219	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2220	if [[ "$interface_file" != "" ]]
2221	then
2222	interface_file=`echo $interface_file \| cut -d"." -f1`
2223	mv Makefile Makefile_old
2224	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2225	fi
2226	cd - > /dev/null
2227	fi
2228	else
2229	cp $executable ${TEMPDIR}/a.out
2230	fi
2231
2232
2233	# WECHSEL IN TEMPORAEREN KATALOG
2234	cd $TEMPDIR
2235	printf "\n *** changed to temporary directory: $TEMPDIR"
2236
2237
2238	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2239	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2240	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2241	# ERMITTELN
2242	(( i = 0 ))
2243	while (( i < iout ))
2244	do
2245	(( i = i + 1 ))
2246	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2247	then
2248	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2249	else
2250	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2251	fi
2252	done
2253
2254
2255	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2256	if [[ $do_compile = true ]]
2257	then
2258
2259
2260	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2261	if [[ "$use_makefile" = true ]]
2262	then
2263	printf "\n\n\n *** compilation starts \n$striche\n"
2264	printf " *** compilation with make using following options:\n"
2265	printf " compilername: $compiler_name\n"
2266	printf " options: $FOPTS\n"
2267	printf " preprocessor-directives: $C_PPOPTS \n"
2268	printf " linker-options: $LOPTS \n"
2269	printf " source code files: $source_list \n"
2270
2271	if [[ $localhost = nech ]]
2272	then
2273	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2274	cp $TEMPDIR_COMPILE/a.out .
2275	[[ $? != 0 ]] && compile_error=true
2276	rm -rf $TEMPDIR_COMPILE
2277	else
2278	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2279	fi
2280
2281	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2282	else
2283
2284
2285	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2286	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2287	printf "\n\n\n *** compilation starts \n$striche\n"
2288
2289
2290	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2291	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2292	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2293	new_source_list=""
2294	for filename in $source_list
2295	do
2296
2297	basename=`print $filename \| cut -f1 -d"."`
2298
2299	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2300	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2301	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2302
2303	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2304	then
2305	new_source_list="$new_source_list "$filename
2306	else
2307
2308	if [[ "$comp_var" = "" ]]
2309	then
2310	SPECIAL_COMPILER=$compiler_name
2311	else
2312	SPECIAL_COMPILER=$comp_var
2313	fi
2314
2315	if [[ "$comp_opt_var" = "" ]]
2316	then
2317	SPECIAL_FOPTS=$FOPTS
2318	else
2319	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2320	fi
2321
2322	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2323	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2324	if [[ $? != 0 ]]
2325	then
2326	printf "\n +++ compiling error occured"
2327	locat=compile
2328	exit
2329	fi
2330	new_source_list="$new_source_list "${basename}.o
2331	fi
2332	done
2333	source_list="$new_source_list"
2334
2335
2336	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2337	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2338	printf " preprocessor-directives: $C_PPOPTS \n"
2339	printf " linker-options: $LOPTS \n"
2340	printf " source code files: $source_list \n"
2341
2342	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2343
2344	fi
2345	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2346	then
2347	printf "\n +++ error occured while compiling or linking"
2348	locat=compile
2349	exit
2350	else
2351	printf "$striche\n *** compilation finished \n"
2352	fi
2353	fi
2354
2355
2356	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2357	if [[ $local_compile = true ]]
2358	then
2359	cd $HOME
2360	rm -rf $TEMPDIR
2361	locat=local_compile; exit
2362	fi
2363
2364
2365	# BEREITSTELLEN DER INPUT-DATEIEN
2366	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2367	(( i = 0 ))
2368	while (( i < iin ))
2369	do
2370	(( i = i + 1 ))
2371	if (( i == 1 ))
2372	then
2373	printf "\n\n *** providing INPUT-files:\n$striche"
2374	fi
2375
2376
2377	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2378	if [[ "${transin[$i]}" = unavailable ]]
2379	then
2380	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2381	then
2382	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2383	printf "\n is not available!"
2384	else
2385	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2386	printf "\n is not available!"
2387	fi
2388	continue
2389	fi
2390
2391	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2392	files_for_pes=false; datentyp=file
2393	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2394	then
2395	files_for_pes=true; datentyp=directory
2396	actionin[$i]=""
2397	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2398	then
2399	actionin[$i]=""
2400	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2401	then
2402	files_for_pes=true; datentyp=directory
2403	actionin[$i]="ar"
2404	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2405	then
2406	actionin[$i]="ar"
2407	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2408	then
2409	files_for_pes=true; datentyp=directory
2410	actionin[$i]="fl"
2411	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2412	then
2413	actionin[$i]="fl"
2414	fi
2415
2416	if [[ $files_for_pes = true ]]
2417	then
2418	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2419	else
2420	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2421	fi
2422
2423	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2424	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2425	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2426	# SERVER ZU HOLEN
2427	if [[ "${actionin[$i]}" = fl ]]
2428	then
2429	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2430	if [[ $files_for_pes = false ]]
2431	then
2432	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2433	then
2434	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2435	got_tmp[$i]=true
2436	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2437	then
2438	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2439	printf "\n *** trying to use backup copy in \"$WORK\" "
2440	cp $WORK/${frelin[$i]} ${localin[$i]}
2441	else
2442	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2443	printf "\n or \"$tmp_data_catalog\" does not exist!"
2444	printf "\n *** trying to get copy from archive"
2445	actionin[$i]=ar
2446	fi
2447	else
2448	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2449	then
2450	mkdir ${localin[$i]}
2451	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2452	got_tmp[$i]=true
2453	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2454	then
2455	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2456	printf "\n *** trying to use backup copy in \"$WORK\" "
2457	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2458	else
2459	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2460	printf "\n or \"$tmp_data_catalog\" does not exist!"
2461	printf "\n *** trying to get copy from archive"
2462	actionin[$i]=ar
2463	fi
2464	fi
2465	fi
2466
2467
2468	# DATEI LIEGT AUF ARCHIV-SERVER
2469	if [[ "${actionin[$i]}" = ar ]]
2470	then
2471
2472	if [[ $files_for_pes = false ]]
2473	then
2474	printf "\n file will be restored from archive-system ($archive_system)!"
2475	else
2476	printf "\n directory will be restored from archive-system ($archive_system)!"
2477	fi
2478
2479	file_restored=false
2480
2481	if [[ $archive_system = asterix ]]
2482	then
2483	do_stagein=true
2484	(( stagein_anz = 0 ))
2485	while [[ $do_stagein = true ]]
2486	do
2487	if [[ $files_for_pes = false ]]
2488	then
2489	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2490	else
2491	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2492	fi
2493	cat STAGEIN_OUTPUT
2494	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2495	then
2496	file_restored=true
2497	do_stagein=false
2498	else
2499	(( stagein_anz = stagein_anz + 1 ))
2500	if (( stagein_anz == 10 ))
2501	then
2502	printf "\n +++ stagein stoped after 10 tries"
2503	locat=stage
2504	exit
2505	fi
2506	printf "\n +++ restoring from archive failed, trying again:"
2507	sleep 900
2508	fi
2509	done
2510	elif [[ $archive_system = DMF ]]
2511	then
2512	if [[ $files_for_pes = false ]]
2513	then
2514	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2515	locat=DMF
2516	exit
2517	else
2518	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2519	cp -r $ARCHIVE/${frelin[$i]} $PWD
2520	file_restored=true
2521	fi
2522	elif [[ $archive_system = tivoli ]]
2523	then
2524	if [[ $files_for_pes = false ]]
2525	then
2526	if [[ $localhost = ibmh ]]
2527	then
2528	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2529	else
2530	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2531	fi
2532	else
2533	(( inode = 0 ))
2534	while (( inode < nodes ))
2535	do
2536	if [[ $localhost = ibmh ]]
2537	then
2538	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2539	else
2540	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2541	fi
2542	(( inode = inode + 1 ))
2543	done
2544	fi
2545	file_restored=true
2546	elif [[ $archive_system = ut ]]
2547	then
2548	if [[ $files_for_pes = false ]]
2549	then
2550	cp $UT/${frelin[$i]} .
2551	else
2552	(( inode = 0 ))
2553	while (( inode < nodes ))
2554	do
2555	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2556	(( inode = inode + 1 ))
2557	done
2558	fi
2559	file_restored=true
2560	else
2561	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2562	locat=rearchive
2563	exit
2564	fi
2565
2566	if [[ $file_restored = true ]]
2567	then
2568
2569	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2570	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2571	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2572	if [[ $files_for_pes = false ]]
2573	then
2574	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2575	else
2576	mkdir $tmp_data_catalog/${frelin[$i]}
2577	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2578	fi
2579	got_tmp[$i]=true
2580
2581	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2582	mv ${frelin[$i]} ${localin[$i]}
2583
2584	fi
2585	fi
2586
2587
2588	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2589	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2590	then
2591
2592	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2593	then
2594
2595	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2596	printf "\n file will be provided for $numprocs processors"
2597	mkdir ${localin[$i]}
2598	ival=$numprocs
2599	(( ii = 0 ))
2600	while (( ii <= ival-1 ))
2601	do
2602	if (( ii < 10 ))
2603	then
2604	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2605	elif (( ii < 100 ))
2606	then
2607	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2608	elif (( ii < 1000 ))
2609	then
2610	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2611	else
2612	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2613	fi
2614	(( ii = ii + 1 ))
2615	done
2616
2617	else
2618
2619	if [[ $files_for_pes = true ]]
2620	then
2621
2622	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2623	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2624	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2625	# PER MOVE UMBENANNT WERDEN
2626	printf "\n providing $numprocs files for the respective processors"
2627	mkdir ${localin[$i]}
2628	cp -r ${absnamein[$i]}/* ${localin[$i]}
2629
2630	else
2631	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2632	cp ${absnamein[$i]} ${localin[$i]}
2633	fi
2634	fi
2635	fi
2636
2637	done
2638	if (( i != 0 ))
2639	then
2640	printf "\n$striche\n *** all INPUT-files provided \n"
2641	fi
2642
2643
2644	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2645	# LESEN VON PALM)
2646	cat > ENVPAR << %%END%%
2647	&envpar run_identifier = '$fname', host = '$localhost',
2648	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2649	maximum_cpu_time_allowed = ${cpumax}. /
2650
2651	%%END%%
2652
2653
2654	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2655	(( i = 0 ))
2656	while (( i < iic ))
2657	do
2658	(( i = i + 1 ))
2659	if (( i == 1 ))
2660	then
2661	printf "\n\n *** execution of INPUT-commands:\n$striche"
2662	fi
2663	printf "\n >>> ${in_command[$i]}"
2664	eval ${in_command[$i]}
2665	if (( i == iic ))
2666	then
2667	printf "\n$striche\n"
2668	fi
2669	done
2670
2671
2672	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2673	cpurest=${cpumax}.
2674
2675
2676	# PROGRAMMSTART
2677	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2678	PATH=$PATH:$TEMPDIR
2679
2680	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2681	then
2682	if [[ "$ENVIRONMENT" = BATCH ]]
2683	then
2684	printf "\n +++ debug is allowed in interactive mode only"
2685	locat=debug
2686	exit
2687	fi
2688	if [[ $localhost = decalpha ]]
2689	then
2690	dxladebug a.out
2691	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2692	then
2693
2694	# SETUP THE IBM MPI ENVIRONMENT
2695	export MP_SHARED_MEMORY=yes
2696	export AIXTHREADS_SCOPE=S
2697	export OMP_NUM_THREADS=$threads_per_task
2698	export AUTHSTATE=files
2699	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2700
2701	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2702	export MP_ADAPTER_USE=shared
2703	export MP_CPU_USE=multiple
2704	export MP_TIMEOUT=1200
2705
2706	unset MP_TASK_AFFINITY
2707
2708	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2709	#(( ii = 1 ))
2710	#while (( ii <= $numprocs ))
2711	#do
2712	# echo $localhost_realname >> hostfile
2713	# (( ii = ii + 1 ))
2714	#done
2715	#export MP_HOSTFILE=hostfile
2716
2717	if [[ "$LOADLBATCH" = yes ]]
2718	then
2719	totalview poe a.out $ROPTS
2720	else
2721	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2722	export TVDSVRLAUNCHCMD=ssh
2723	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2724	fi
2725	else
2726	printf "\n +++ no debug available on \"$localhost\" "
2727	printf "\n or not implemented in mrun so far"
2728	locat=debug
2729	exit
2730	fi
2731	else
2732	if [[ -n $numprocs ]]
2733	then
2734
2735	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2736	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2737	then
2738	# SETUP THE IBM MPI ENVIRONMENT
2739	export MP_SHARED_MEMORY=yes
2740	export AIXTHREAD_SCOPE=S
2741	export OMP_NUM_THREADS=$threads_per_task
2742	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2743	export AUTHSTATE=files
2744	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2745	# export MP_PRINTENV=yes
2746
2747	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2748	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2749	export MP_WAIT_MODE=poll
2750	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2751	# export MP_EAGER_LIMIT=65535
2752
2753	# # TESTWEISE FUER TURBOMPI (JAN 05)
2754	# export MPJ_MTAB=128
2755	# export MPJ_ALLTOALL=1
2756	# export MPJ_ALLTOALLV=1
2757
2758	if [[ "$LOADLBATCH" = yes ]]
2759	then
2760	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2761	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2762	then
2763	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2764	else
2765	poe ./a.out $ROPTS > aout_output 2>&1
2766	fi
2767	else
2768	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2769	then
2770	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2771	elif [[ $localhost = ibmy ]]
2772	then
2773	if [[ -f $hostfile ]]
2774	then
2775	cp $hostfile hostfile
2776	else
2777	(( ii = 1 ))
2778	while (( ii <= $numprocs ))
2779	do
2780	echo $localhost_realname >> hostfile
2781	(( ii = ii + 1 ))
2782	done
2783	fi
2784	export MP_HOSTFILE=hostfile
2785	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2786	else
2787	if [[ "$host_file" = "" ]]
2788	then
2789	printf "\n +++ no hostfile given in configuration file"
2790	locat=config_file
2791	exit
2792	else
2793	eval host_file=$host_file
2794	fi
2795	export MP_HOSTFILE=$host_file
2796	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2797	fi
2798	fi
2799	elif [[ $host = nech \|\| $host = neck ]]
2800	then
2801	(( ii = nodes ))
2802	if [[ $ii = 1 ]]
2803	then
2804	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2805	export MPIPROGINF=YES
2806	echo "*** execution on single node with mpirun"
2807	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2808	else
2809	(( i = 0 ))
2810	while (( i < ii ))
2811	do
2812	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2813	(( i = i + 1 ))
2814	done
2815
2816	echo "#!/bin/sh" > mpi_exec_shell
2817	echo " " >> mpi_exec_shell
2818	echo "set -u" >> mpi_exec_shell
2819	echo "F_ERRCNT=0" >> mpi_exec_shell
2820	echo "MPIPROGINV=YES" >> mpi_exec_shell
2821	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2822	echo "cpurest=$cpurest" >> mpi_exec_shell
2823	echo "fname=$fname" >> mpi_exec_shell
2824	echo "localhost=$localhost" >> mpi_exec_shell
2825	echo "return_addres=$return_addres" >> mpi_exec_shell
2826	echo "return_username=$return_username" >> mpi_exec_shell
2827	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2828	echo "write_binary=$write_binary" >> mpi_exec_shell
2829	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2830	echo " " >> mpi_exec_shell
2831	echo "export F_ERRCNT" >> mpi_exec_shell
2832	echo "export MPIPROGINV" >> mpi_exec_shell
2833	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2834	echo "export cpurest" >> mpi_exec_shell
2835	echo "export fname" >> mpi_exec_shell
2836	echo "export localhost" >> mpi_exec_shell
2837	echo "export return_addres" >> mpi_exec_shell
2838	echo "export return_username" >> mpi_exec_shell
2839	echo "export tasks_per_node" >> mpi_exec_shell
2840	echo "export write_binary" >> mpi_exec_shell
2841	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2842	echo " " >> mpi_exec_shell
2843	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2844
2845	chmod u+x mpi_exec_shell
2846	export MPIPROGINF=YES
2847	mpirun -f multinode_config &
2848	wait
2849
2850	fi
2851	elif [[ $host = lcmuk ]]
2852	then
2853
2854	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2855	# DOES NOT EXIST
2856	if [[ -f $hostfile ]]
2857	then
2858	cp $hostfile hostfile
2859	else
2860	(( ii = 1 ))
2861	while (( ii <= $numprocs / $threads_per_task ))
2862	do
2863	echo $localhost_realname >> hostfile
2864	(( ii = ii + 1 ))
2865	done
2866	fi
2867	(( ii = $numprocs / $threads_per_task ))
2868	eval zeile=\"`head -n $ii hostfile`\"
2869	printf "\n *** running on: $zeile"
2870	export OMP_NUM_THREADS=$threads_per_task
2871	if [[ $threads_per_task != 1 ]]
2872	then
2873	printf "\n threads per task: $threads_per_task"
2874	fi
2875	printf "\n\n"
2876	if [[ $scirocco = true ]]
2877	then
2878	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2879	else
2880	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2881	fi
2882	elif [[ $host = decalpha ]]
2883	then
2884	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2885	elif [[ $host = lctit ]]
2886	then
2887	export runfile=runfile.$kennung
2888
2889	echo "cd $PWD" > $runfile
2890	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2891	echo "export cpurest=$cpurest" >> $runfile
2892	echo "export fname=$fname" >> $runfile
2893	echo "export localhost=$localhost" >> $runfile
2894	echo "export return_addres=$return_addres" >> $runfile
2895	echo "export return_username=$return_username" >> $runfile
2896	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2897	echo "export write_binary=$write_binary" >> $runfile
2898	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2899	echo "./a.out" >> $runfile
2900	chmod u+x $runfile
2901
2902	if [[ "$QUEUE" = interactive ]]
2903	then
2904	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2905	else
2906	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2907	fi
2908
2909	rm $runfile
2910	else
2911	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2912	fi
2913	[[ $? != 0 ]] && execution_error=true
2914
2915
2916	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2917	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2918	then
2919	apprentice
2920	fi
2921	else
2922	a.out $ROPTS > aout_output 2>&1
2923	fi
2924	fi
2925	if [[ $? != 0 \|\| $execution_error = true ]]
2926	then
2927
2928	# ABBRUCH BEI LAUFZEITFEHLER
2929	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2930	printf "\n +++ runtime error occured"
2931	locat=execution
2932	exit
2933	else
2934	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2935	printf "\n$striche\n *** execution finished \n"
2936	fi
2937
2938
2939
2940	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2941	(( i = 0 ))
2942	while (( i < ioc ))
2943	do
2944	(( i = i + 1 ))
2945	if (( i == 1 ))
2946	then
2947	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2948	fi
2949	printf "\n >>> ${out_command[$i]}"
2950	eval ${out_command[$i]}
2951	if (( i == ioc ))
2952	then
2953	printf "\n$striche\n"
2954	fi
2955	done
2956
2957
2958	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2959	if [[ $do_trace = true ]]
2960	then
2961	printf "\n\n"
2962	ls -al
2963	fi
2964
2965
2966
2967	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2968	(( i = 0 ))
2969	while (( i < iout ))
2970	do
2971	(( i = i + 1 ))
2972	if (( i == 1 ))
2973	then
2974	printf "\n\n *** saving OUTPUT-files:\n$striche"
2975	fi
2976
2977	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2978	files_for_pes=false; filetyp=file
2979	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2980	then
2981	files_for_pes=true; filetyp=directory
2982	actionout[$i]=""
2983	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2984	then
2985	actionout[$i]=""
2986	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2987	then
2988	files_for_pes=true; filetyp=directory
2989	actionout[$i]="ar"
2990	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2991	then
2992	actionout[$i]="ar"
2993	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2994	then
2995	files_for_pes=true; filetyp=directory
2996	actionout[$i]="fl"
2997	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2998	then
2999	actionout[$i]="fl"
3000	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3001	then
3002	files_for_pes=true; filetyp=directory
3003	actionout[$i]="tr"
3004	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3005	then
3006	actionout[$i]="tr"
3007	fi
3008
3009	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3010	then
3011	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3012	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3013	then
3014	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3015	else
3016
3017
3018	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3019	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3020	# REMOTE-RECHNUNGEN
3021	if [[ "${actionout[$i]}" = tr ]]
3022	then
3023	if [[ $localhost != $fromhost ]]
3024	then
3025	if [[ $files_for_pes = false ]]
3026	then
3027	cps=""
3028	cst=""
3029	else
3030	cps=-c
3031	cst="/"
3032	fi
3033	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3034	then
3035
3036	# TRANSFER IN EIGENSTAENDIGEM JOB
3037	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3038	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3039	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3040	if [[ $files_for_pes = false ]]
3041	then
3042	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3043	else
3044	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3045	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3046	fi
3047
3048	echo "set -x" > transfer_${localout[$i]}
3049	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3050	if [[ $filetransfer_protocol = ftp ]]
3051	then
3052	if [[ $files_for_pes = true ]]
3053	then
3054	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3055	fi
3056	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3057	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3058	printf "\n or higher cycle\n"
3059	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3060	else
3061	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3062	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3063	printf "\n or higher cycle\n"
3064	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3065	fi
3066	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3067
3068	if [[ $localhost = nech ]]
3069	then
3070	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3071	else
3072	if [[ "$LOGNAME" = b323013 ]]
3073	then
3074	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3075	else
3076	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3077	fi
3078	fi
3079
3080	else
3081
3082	# TRANSFER INNERHALB DIESES JOBS
3083	transfer_failed=false
3084	if [[ $filetransfer_protocol = ftp ]]
3085	then
3086	if [[ $files_for_pes = true ]]
3087	then
3088	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3089	fi
3090	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3091	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3092	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3093	[[ $? != 0 ]] && transfer_failed=true
3094	else
3095	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3096	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3097	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3098	[[ $? != 0 ]] && transfer_failed=true
3099	fi
3100
3101	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3102	# LOKALER MASCHINE ANLEGEN
3103	if [[ $transfer_failed = true ]]
3104	then
3105	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3106	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3107
3108	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3109	# ANLEGEN.
3110	eval local_catalog=${pathout[$i]}
3111	if [[ ! -d $local_catalog ]]
3112	then
3113	printf " *** local directory does not exist. Trying to create:\n"
3114	printf " $local_catalog \n"
3115	mkdir -p $local_catalog
3116	fi
3117	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3118	transfer_problems=true
3119	fi
3120	fi
3121	else
3122
3123	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3124	actionout[$i]=""
3125	fi
3126	fi
3127
3128
3129	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3130	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3131	# REMOTE-RECHNUNGEN
3132	if [[ "${actionout[$i]}" = tra ]]
3133	then
3134	if [[ $localhost != $fromhost ]]
3135	then
3136	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3137	then
3138
3139	# TRANSFER IN EIGENSTAENDIGEM JOB
3140	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3141	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3142	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3143	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3144
3145	echo "set -x" > transfer_${localout[$i]}
3146	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3147	if [[ $filetransfer_protocol = ftp ]]
3148	then
3149	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3150	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3151	printf "\n or higher cycle\n"
3152	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3153	else
3154	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3155	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3156	printf "\n or higher cycle\n"
3157	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3158	fi
3159	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3160
3161	if [[ $localhost = nech ]]
3162	then
3163	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3164	else
3165	if [[ $LOGNAME = b323013 ]]
3166	then
3167	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3168	else
3169	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3170	fi
3171	fi
3172
3173	else
3174
3175	# TRANSFER INNERHALB DIESES JOBS
3176	transfer_failed=false
3177	if [[ $filetransfer_protocol = ftp ]]
3178	then
3179	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3180	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3181	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3182	[[ $? != 0 ]] && transfer_failed=true
3183	else
3184	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3185	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3186	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3187	[[ $? != 0 ]] && transfer_failed=true
3188	fi
3189
3190	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3191	# LOKALER MASCHINE ANLEGEN
3192	if [[ $transfer_failed = true ]]
3193	then
3194	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3195	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3196
3197	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3198	# ANLEGEN
3199	eval local_catalog=${pathout[$i]}
3200	if [[ ! -d $local_catalog ]]
3201	then
3202	printf " *** local directory does not exist. Trying to create:\n"
3203	printf " $local_catalog \n"
3204	mkdir -p $local_catalog
3205	fi
3206
3207	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3208	transfer_problems=true
3209	fi
3210	fi
3211	else
3212
3213	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3214	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3215	actionout[$i]=a
3216	fi
3217	fi
3218
3219
3220	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3221	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3222	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3223	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3224	if [[ "${actionout[$i]}" = fl ]]
3225	then
3226	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3227	chmod g+rx $tmp_data_catalog
3228	if [[ $files_for_pes = false ]]
3229	then
3230	printf "\n >>> OUTPUT: ${localout[$i]} to"
3231	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3232	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3233	else
3234	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3235	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3236	mkdir $tmp_data_catalog/${frelout[$i]}
3237	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3238	fi
3239
3240
3241	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3242	if [[ $store_on_archive_system = true ]]
3243	then
3244
3245	if [[ $archive_system = asterix ]]
3246	then
3247	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3248	if [[ $files_for_pes = false ]]
3249	then
3250	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3251	else
3252	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3253	fi
3254	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3255	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3256	echo "then" >> archive_${frelout[$i]}
3257	echo " do_stageout=false" >> archive_${frelout[$i]}
3258	echo "else" >> archive_${frelout[$i]}
3259	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3260	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3261	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3262	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3263	if [[ $files_for_pes = false ]]
3264	then
3265	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3266	else
3267	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3268	fi
3269	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3270	echo "fi" >> archive_${frelout[$i]}
3271	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3272	elif [[ $archive_system = DMF ]]
3273	then
3274	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3275	if [[ $files_for_pes = false ]]
3276	then
3277	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3278	locat=DMF
3279	exit
3280	else
3281	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3282	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3283	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3284	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3285	fi
3286	elif [[ $archive_system = tivoli ]]
3287	then
3288	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3289	if [[ $files_for_pes = false ]]
3290	then
3291	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3292	echo "set -x" >> archive_${frelout[$i]}
3293	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3294	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3295	else
3296
3297	echo "set -x" >> archive_${frelout[$i]}
3298	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3299	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3300	cd $tmp_data_catalog
3301	all_files=`ls -1 ${frelout[$i]}/*`
3302	cd - > /dev/null
3303	(( inode = 0 ))
3304	(( tp1 = tasks_per_node + 1 ))
3305	while (( inode < nodes ))
3306	do
3307	# echo "*** all_files = \"$all_files\" "
3308	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3309	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3310	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3311	# echo "*** files = \"$files\" "
3312	# echo "*** all_files = \"$all_files\" "
3313	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3314	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3315	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3316	(( inode = inode + 1 ))
3317	done
3318	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3319	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3320	fi
3321	elif [[ $archive_system = ut ]]
3322	then
3323	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3324	if [[ $files_for_pes = false ]]
3325	then
3326	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3327	echo "set -x" >> archive_${frelout[$i]}
3328	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3329	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3330	else
3331
3332	echo "set -x" >> archive_${frelout[$i]}
3333	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3334	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3335	cd $tmp_data_catalog
3336	all_files=`ls -1 ${frelout[$i]}/*`
3337	cd - > /dev/null
3338	(( inode = 0 ))
3339	(( tp1 = tasks_per_node + 1 ))
3340	while (( inode < nodes ))
3341	do
3342	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3343	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3344	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3345	(( inode = inode + 1 ))
3346	done
3347	fi
3348	elif [[ $archive_system = none ]]
3349	then
3350	printf " +++ archiving on $localhost not available!\n"
3351	fi
3352
3353	if [[ $archive_system != none ]]
3354	then
3355	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3356	then
3357	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3358	elif [[ $localhost = nech ]]
3359	then
3360	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3361	fi
3362	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3363	fi
3364	else
3365	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3366	fi
3367
3368
3369	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3370	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3371	if [[ $files_for_pes = false ]]
3372	then
3373	cat /dev/null > ${pathout[$i]}
3374	else
3375	mkdir -p ${pathout[$i]}
3376	fi
3377
3378	fi
3379
3380
3381	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3382	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3383	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3384	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3385	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3386	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3387	if [[ "${actionout[$i]}" = ar ]]
3388	then
3389	if [[ $files_for_pes = false ]]
3390	then
3391	printf "\n >>> OUTPUT: ${localout[$i]} to"
3392	printf "\n ${pathout[$i]}"
3393	printf "\n File will be copied to archive-system ($archive_system) !\n"
3394	else
3395	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3396	printf "\n ${pathout[$i]}"
3397	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3398	fi
3399	mv ${localout[$i]} ${frelout[$i]}
3400
3401	file_saved=false
3402
3403	if [[ $archive_system = asterix ]]
3404	then
3405	do_stageout=true
3406	(( stageout_anz = 0 ))
3407	while [[ $do_stageout = true ]]
3408	do
3409	if [[ $files_for_pes = false ]]
3410	then
3411	stageout ${frelout[$i]} > STAGE_OUTPUT
3412	else
3413	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3414	fi
3415	cat STAGE_OUTPUT
3416	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3417	then
3418	file_saved=true
3419	do_stageout=false
3420	else
3421	if [[ $files_for_pes = false ]]
3422	then
3423	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3424	else
3425	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3426	fi
3427	(( stageout_anz = stageout_anz + 1 ))
3428	if (( stageout_anz == 10 ))
3429	then
3430	printf "\n +++ stoped after 10 unsuccessful tries!"
3431	archive_save=false
3432	do_stageout=false
3433	else
3434	printf "\n *** new try to store on archive after 15 min:"
3435	sleep 900
3436	fi
3437	fi
3438	done
3439	elif [[ $archive_system = DMF ]]
3440	then
3441	if [[ $files_for_pes = false ]]
3442	then
3443	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3444	locat=DMF
3445	exit
3446	else
3447	rm -rf $ARCHIVE/${frelout[$i]}
3448	cp -r ${frelout[$i]} $ARCHIVE
3449	fi
3450	file_saved=true
3451	elif [[ $archive_system = tivoli ]]
3452	then
3453	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3454	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3455	# GELEGT WERDEN
3456	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3457	chmod g+rx $tmp_data_catalog
3458	if [[ $files_for_pes = false ]]
3459	then
3460	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3461	else
3462	mkdir $tmp_data_catalog/${frelout[$i]}
3463	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3464	fi
3465
3466	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3467	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3468	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3469	if [[ $files_for_pes = false ]]
3470	then
3471	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3472	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3473	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3474	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3475	else
3476	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3477	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3478	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3479	fi
3480
3481	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3482	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3483	file_saved=true
3484
3485	elif [[ $archive_system = ut ]]
3486	then
3487	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3488	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3489	# GELEGT WERDEN
3490	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3491	chmod g+rx $tmp_data_catalog
3492	if [[ $files_for_pes = false ]]
3493	then
3494	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3495	else
3496	mkdir $tmp_data_catalog/${frelout[$i]}
3497	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3498	fi
3499
3500	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3501	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3502	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3503	if [[ $files_for_pes = false ]]
3504	then
3505	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3506	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3507	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3508	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3509	else
3510	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3511	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3512	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3513	fi
3514
3515	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3516	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3517	file_saved=true
3518
3519	else
3520	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3521	archive_save=false
3522	fi
3523	if [[ $file_saved = true ]]
3524	then
3525	if [[ $files_for_pes = false ]]
3526	then
3527	cat /dev/null > ${pathout[$i]}
3528	else
3529	mkdir -p ${pathout[$i]}
3530	fi
3531	fi
3532	fi
3533
3534	# APPEND AUF LOKALER MASCHINE
3535	if [[ "${actionout[$i]}" = "a" ]]
3536	then
3537	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3538	cat ${localout[$i]} >> ${pathout[$i]}
3539	fi
3540
3541	# KOPIEREN AUF LOKALER MASCHINE
3542	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3543	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3544	then
3545
3546	# KOPIEREN AUF EINPROZESSORMASCHINE
3547	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3548	then
3549	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3550	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3551	else
3552	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3553	cp ${localout[$i]} ${pathout[$i]}
3554	fi
3555
3556	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3557	then
3558
3559	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3560	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3561	# WIRD DANN KOPIERT
3562	# PER MOVE UMBENANNT WERDEN
3563	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3564	cp -r ${localout[$i]} ${pathout[$i]}
3565
3566	fi
3567	fi
3568	done
3569	if (( i != 0 ))
3570	then
3571	if [[ $transfer_problems = true ]]
3572	then
3573	printf "\n$striche\n *** OUTPUT-files saved"
3574	printf "\n +++ WARNING: some data transfers failed! \n"
3575	else
3576	printf "\n$striche\n *** all OUTPUT-files saved \n"
3577	fi
3578	fi
3579
3580
3581	# EVENTUELL FOLGEJOB STARTEN
3582	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3583	if [[ -f CONTINUE_RUN ]]
3584	then
3585
3586	if [[ $archive_save = true ]]
3587	then
3588
3589	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3590	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3591	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3592	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3593	# HANDEN
3594	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3595	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3596	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3597	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3598	then
3599	mc=`echo $mc \| sed 's/#/f/g'`
3600	fi
3601
3602
3603	# JOB STARTEN
3604	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3605	echo " $mc"
3606	printf "\n$striche\n"
3607	if [[ $localhost != $fromhost ]]
3608	then
3609
3610	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3611	then
3612	echo "*** ssh will be used to initiate restart-runs!"
3613	echo " return_addres=\"$return_addres\" "
3614	echo " return_username=\"$return_username\" "
3615	if [[ $return_addres = 172.20.25.41 ]]
3616	then
3617	# WORKAROUND AUF SCIROCCO AM TIT
3618	print "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3619	else
3620	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3621	fi
3622	else
3623	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3624	locat=restart; exit
3625	fi
3626
3627	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3628	# DER AKTUELLE JOB ENDET
3629	sleep 30
3630
3631	else
3632
3633	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3634	# RUFEN WERDEN
3635	cd $LOCAL_PWD
3636	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3637	cd - > /dev/null
3638	fi
3639	printf "\n$striche\n *** restart-run initiated \n"
3640
3641
3642	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3643	# GEHOLT WORDEN SIND, LOESCHEN
3644	(( i = 0 ))
3645	while (( i < iin ))
3646	do
3647	(( i = i + 1 ))
3648	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3649	then
3650	rm -r $tmp_data_catalog/${frelin[$i]}
3651	fi
3652	done
3653
3654	else
3655
3656	printf "\n +++ no restart-run possible, since errors occured"
3657	printf "\n during the archive process"
3658	fi
3659
3660	fi
3661
3662
3663
3664	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3665	if [[ "$email_notification" != "" ]]
3666	then
3667
3668	if [[ $localhost != $fromhost ]]
3669	then
3670	if [[ -f CONTINUE_RUN ]]
3671	then
3672	echo "PALM restart run necessary" > email_text
3673	echo "description header of actual run:" >> email_text
3674	cat CONTINUE_RUN >> email_text
3675	echo "mrun-command to restart:" >> email_text
3676	echo "$mc" >> email_text
3677	else
3678	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3679	fi
3680	mail $email_notification < email_text
3681	printf "\n *** email notification sent to \"$email_notification\" "
3682	fi
3683	fi
3684
3685
3686
3687	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3688	cd $HOME
3689	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3690
3691	else
3692
3693
3694	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3695	# CHENDE AKTIONEN DURCHGEFUEHRT
3696
3697	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3698	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3699	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3700	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3701	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3702	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3703	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3704	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3705	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3706	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3707	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3708	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3709	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3710	if [[ $use_openmp = true ]]
3711	then
3712	mrun_com=${mrun_com}" -O"
3713	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3714	else
3715	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3716	fi
3717	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3718	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3719	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3720	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3721	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3722	if [[ $do_remote = true ]]
3723	then
3724	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3725	fi
3726
3727
3728	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3729	jobfile=jobfile.$RANDOM
3730
3731
3732	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3733	echo "mkdir $TEMPDIR" >> $jobfile
3734	echo "cd $TEMPDIR" >> $jobfile
3735
3736
3737	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3738	if [[ $do_trace = true ]]
3739	then
3740	echo "set -x" >> $jobfile
3741	else
3742	echo "set +vx" >> $jobfile
3743	fi
3744
3745
3746	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3747	# SOWIE GEGEBENENFALLS DES MAKEFILES
3748	if [[ $do_compile = true ]]
3749	then
3750
3751	source_catalog=SOURCES_FOR_RUN_$fname
3752
3753	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3754	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3755	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3756	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3757	echo "export SOURCES_COMPLETE=true" >> $jobfile
3758	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3759
3760	for filename in $source_list
3761	do
3762	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3763	echo "cat > $filename << \"%END%\"" >> $jobfile
3764	cat $source_catalog/$filename >> $jobfile
3765	echo " " >> $jobfile
3766	echo "%END%" >> $jobfile
3767	echo " " >> $jobfile
3768	done
3769
3770	if [[ "$use_makefile" = true ]]
3771	then
3772	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3773	echo "cat > Makefile << \"%END%\"" >> $jobfile
3774	cat $source_catalog/Makefile >> $jobfile
3775	echo " " >> $jobfile
3776	echo "%END%" >> $jobfile
3777	echo " " >> $jobfile
3778	fi
3779
3780	echo "cd - > /dev/null" >> $jobfile
3781
3782	fi
3783
3784
3785	# ABSPEICHERN DER KONFIGURATIONSDATEI
3786	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3787	echo "cat > $config_file << \"%END%\"" >> $jobfile
3788	cat $config_file >> $jobfile
3789	echo "%END%" >> $jobfile
3790	echo " " >> $jobfile
3791
3792
3793	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3794	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3795	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3796	cat ${mrun_path}/$mrun_script_name >> $jobfile
3797	echo "%END%" >> $jobfile
3798	if [[ $host = lctit ]]
3799	then
3800	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3801	echo "mv mrun_new $mrun_script_name" >> $jobfile
3802	fi
3803	echo "chmod u+x $mrun_script_name" >> $jobfile
3804	echo "execute_mrun=true" >> $jobfile
3805	echo " " >> $jobfile
3806
3807	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3808	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3809	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3810	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3811	if [[ $do_remote = true ]]
3812	then
3813	(( i = 0 ))
3814	while (( i < iin ))
3815	do
3816	(( i = i + 1 ))
3817	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3818	if [[ "${transin[$i]}" = job ]]
3819	then
3820	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3821	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3822	echo " " >> $jobfile
3823	echo "%END%" >> $jobfile
3824	else
3825	if [[ $filetransfer_protocol = ftp ]]
3826	then
3827	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3828	else
3829	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3830	fi
3831	fi
3832
3833	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3834	echo "if [[ \$? = 1 ]]" >> $jobfile
3835	echo "then" >> $jobfile
3836	echo " echo \" \" " >> $jobfile
3837	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3838	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3839	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3840	echo " execute_mrun=false" >> $jobfile
3841	echo "fi" >> $jobfile
3842	done
3843	fi
3844
3845	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3846	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3847	echo "LOCAL_PWD=$working_directory" >> $jobfile
3848	echo "export LOCAL_PWD" >> $jobfile
3849
3850	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3851	echo "LOCAL_MRUN_PATH=$mrun_path" >> $jobfile
3852	echo "export LOCAL_MRUN_PATH" >> $jobfile
3853
3854	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3855
3856	# MRUN AUF ZIELRECHNER AUFRUFEN
3857	echo "set -x" >> $jobfile
3858	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3859
3860	echo 'ls -al; echo `pwd`' >> $jobfile
3861	echo "cd \$HOME" >> $jobfile
3862	echo "rm -rf $TEMPDIR" >> $jobfile
3863
3864
3865
3866
3867	# JOB PER SUBJOB STARTEN
3868	if [[ $silent = false ]]
3869	then
3870	printf "\n "
3871	else
3872	printf "\n\n"
3873	fi
3874
3875	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3876	rm -rf $jobfile
3877
3878
3879	fi # ENDE REMOTE-TEIL
3880
3881
3882
3883	# ENDE DER PROZEDUR

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