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source: palm/trunk/SCRIPTS/mrun @ 367

Last change on this file since 367 was 367, checked in by maronga, 15 years ago
adapted for machine lck
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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 367 2009-08-25 08:35:52Z maronga $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
167	# with environment variable mpilib
168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
169	# using environment variable totalview
170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
171	# interactive runs
172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
174	# dvr streaming server is automatically started using
175	# new variable dvr_server and a configuration file
176	# .dvrserver.config,
177	# processing of dvr output files using new script
178	# process_dvr_output implemented, in order to make
179	# dvr application more user friendly
180	# 20/03/09 - Marcus - update of n1ge command for lctit
181	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
182	# to be followed by a coupled atmosphere-ocean run
183	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
184	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
185	# 08/07/09 - Siggi - default value for email_notification is none,
186	# option -e added to subjob
187	# 19/08/09 - Marcus - MPI debug option
188	# 21/08/09 - Marcus - totalview on hice/bice also available for mvapich2
189	# 25/08/09 - BjornM - adpated for lck
190
191
192	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
193
194	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
195	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
196	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
197
198	AddFilenames=""
199	additional_conditions=""
200	add_source_path=""
201	afname=""
202	archive_save=true
203	archive_system=none
204	compiler_name=""
205	cond1=""
206	cond2=""
207	config_file=.mrun.config
208	coupled_dist=""
209	coupled_mode="mpi1"
210	cpp_opts=""
211	cpp_options=""
212	cpumax=0
213	cpurest=0
214	delete_temporary_catalog=true
215	do_batch=false
216	do_compile=true
217	do_remote=false
218	do_stagein=true
219	do_stageout=true
220	do_trace=false
221	email_notification="none"
222	exclude=""
223	executable=""
224	execution_error=false
225	fimm=false
226	fname=test
227	fromhost=""
228	global_revision=""
229	group_number=none
230	host=""
231	host_file=""
232	hp=""
233	ignore_archive_error=false
234	input_list=""
235	interpreted_config_file=""
236	job_catalog="~/job_queue"
237	job_on_file=""
238	keep_data_from_previous_run=false
239	link_local_input=false
240	link_local_output=false
241	localhost_realname=$(hostname)
242	local_compile=false
243	local_dvrserver_running=.FALSE.
244	locat=normal
245	mainprog=""
246	makefile=""
247	mc=$0
248	while [[ $(echo $mc \| grep -c "/") != 0 ]]
249	do
250	mc=`echo $mc \| cut -f2- -d"/"`
251	done
252	module_files=""
253	mrun_script_name=$mc
254	netcdf_inc=""
255	netcdf_lib=""
256	netcdf_support=false
257	node_usage=default
258	numprocs=""
259	numprocs_atmos=0
260	numprocs_ocean=0
261	OOPT=""
262	openmp=false
263	output_list=""
264	package_list=""
265	punkte="..........................................................."
266	queue=none
267	read_from_config=""
268	restart_run=false
269	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
270	if [[ $return_addres = 130.75.105.158 ]]
271	then
272	return_addres=172.20.25.41
273	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
274	fi
275	return_password=""
276	return_username=$LOGNAME
277	remotecall=false
278	remote_username=""
279	run_coupled_model=false
280	run_mode=""
281	scirocco=false
282	store_on_archive_system=true
283	striche=" ----------------------------------------------------------------------------"
284	silent=false
285	source_list=""
286	source_path=SOURCE
287	tasks_per_node=""
288	threads_per_task=1
289	tmpcreate=false
290	tmp_data_catalog=""
291	transfer_problems=false
292	usern=$LOGNAME
293	working_directory=`pwd`
294	TOPT=""
295	XOPT=""
296	zeit=$( date \| cut -c 12-19 )
297
298	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
299	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
300
301	typeset -R30 calltime
302	typeset -L20 spalte1
303	typeset -L40 spalte2
304	typeset -L60 spalte3
305	typeset -L35 string1=`date`
306	typeset -L12 string2=$usern
307	typeset -L12 string3=$localhost_realname
308	typeset -L12 string4
309	typeset -L12 string5
310	typeset -L30 version="MRUN 2.0 Rev$Rev: 367 $"
311
312
313
314	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
315	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
316
317	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
318	# EXPORTIERT WERDEN
319	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
320	export group_number input_list memory numprocs output_list queue run_mode
321
322
323
324	# FEHLERBEHANDLUNG
325	# BEI EXIT:
326	trap 'rm -rf $working_directory/tmp_mrun
327	if [[ $locat != localhost ]]
328	then
329	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
330	# then
331	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
332	#MRUN-calls on $localhost
333	#
334	#date and time user localhost remotehost termination mrun-command
335	#--------------------------------------------------------------------------------------------------------------------
336	#%STATEND%
337	# chmod 666 ${mrun_path}/statistik/mrun_statistik
338	# fi
339	#
340	# # EINTRAG IN DIE STATISTIK-DATEI
341	# string4=$host
342	# string5=$locat
343	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
344	# then
345	# if [[ $do_batch = true ]]
346	# then
347	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
348	# else
349	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
350	# fi
351	# fi
352	echo " " > /dev/null
353	fi
354
355	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
356	then
357
358	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
359	(( i = 0 ))
360	while (( i < iec ))
361	do
362	(( i = i + 1 ))
363	printf "\n *** Execution of ERROR-command:\n"
364	printf " >>> ${err_command[$i]}\n"
365	eval ${err_command[$i]}
366	done
367	if [[ -n $interpreted_config_file ]] then
368	rm -rf $interpreted_config_file
369	fi
370	if [[ -n .mrun_environment ]] then
371	rm -rf .mrun_environment
372	fi
373	if [[ $tmpcreate = true ]]
374	then
375	printf "\n *** Contents of \"$TEMPDIR\":\n"
376	ls -al; cd
377	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
378	fi
379	if [[ "$dvrserver_id" != "" ]]
380	then
381	echo "+++ killing dvrserver_id=$dvrserver_id"
382	kill $dvrserver_id
383	fi
384	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
385	then
386	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
387	fi
388	printf "\n\n+++ MRUN killed \n\n"
389	elif [[ $locat != control_c ]]
390	then
391	printf "\n\n --> all actions finished\n\n"
392	printf " Bye, bye $usern !!\n\n"
393	fi' exit
394
395
396	# BEI TERMINAL-BREAK:
397	trap 'rm -rf $working_directory/tmp_mrun
398	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
399	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
400	then
401	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
402	fi
403	if [[ "$dvrserver_id" != "" ]]
404	then
405	echo "+++ killing dvrserver_id=$dvrserver_id"
406	kill $dvrserver_id
407	fi
408	printf "\n+++ MRUN killed by \"^C\" \n\n"
409	locat=control_c
410	exit
411	' 2
412
413
414	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
415	# BEEN SET
416	if [[ "$PALM_BIN" = "" ]]
417	then
418	printf "\n +++ environment variable PALM_BIN has not been set"
419	printf "\n please set it to the directory where the PALM scripts are located"
420	locat=palm_bin; exit
421	fi
422	export PATH=$PALM_BIN:$PATH
423
424
425
426	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
427	# FUER FOLGEJOBS BENOETIGT WIRD
428	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
429	do
430	case $option in
431	(a) afname=$OPTARG;;
432	(A) store_on_archive_system=false; mc="$mc -A";;
433	(b) do_batch=true; mc="$mc -b";;
434	(B) delete_temporary_catalog=false; mc="$mc -B";;
435	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
436	(C) restart_run=true; mc="$mc -C";;
437	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
438	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
439	(F) job_on_file="-D"; mc="$mc -F";;
440	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
441	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
442	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
443	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
444	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
445	(I) ignore_archive_error=true; mc="$mc -I";;
446	(k) keep_data_from_previous_run=true; mc="$mc -k";;
447	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
448	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
449	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
450	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
451	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
452	(O) use_openmp=true; mc="$mc -O";;
453	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
454	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
455	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
456	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
457	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
458	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
459	(S) read_from_config=false; mc="$mc -S";;
460	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
461	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
462	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
463	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
464	(v) silent=true; mc="$mc -v";;
465	(x) do_trace=true;set -x; mc="$mc -x";;
466	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
467	(y) ocean_file_appendix=true; mc="$mc -y";;
468	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
469	(\?) printf "\n +++ unknown option $OPTARG \n"
470	printf "\n --> type \"$0 ?\" for available options \n"
471	locat=parameter;exit;;
472	esac
473	done
474
475
476	# EVTL. POSITIONSPARAMETER EINLESEN
477	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
478	shift OPTIND-1
479
480
481	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
482	if [[ "$1" = "?" ]]
483	then
484	(printf "\n *** mrun can be called as follows:\n"
485	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
486	printf "\n Description of available options:\n"
487	printf "\n Option Description Default-Value"
488	printf "\n -a base name of input files equiv. -d"
489	printf "\n -A no archiving when using file-attribute fl"
490	printf "\n -b batch-job on local machine ---"
491	printf "\n -B do not delete temporary directory at end ---"
492	printf "\n -c configuration file .mrun.config"
493	printf "\n -d base name of files attached to program test"
494	printf "\n -D preprocessor(cpp)-directives \"\" "
495	printf "\n -F create remote job file only ---"
496	printf "\n -h execution host $localhost_realname"
497	printf "\n -i INPUT control list \"\" "
498	printf "\n -I archiving errors of previous batch-jobs"
499	printf "\n will be ignored"
500	printf "\n -k keep data from previous run"
501	printf "\n -K additional conditions for controling"
502	printf "\n usage of conditional code and"
503	printf "\n env-variables in configuration file \"\" "
504	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
505	printf "\n -M Makefile name Makefile"
506	printf "\n -n node usage (shared/not_shared) depending on -h"
507	printf "\n -o OUTPUT control list \"\" "
508	printf "\n -O use OpenMP ---"
509	printf "\n -p software package list \"\" "
510	printf "\n -q queue \"$queue\" "
511	printf "\n -r run control list (combines -i -o) \"\" "
512	printf "\n -s filenames of routines to be compiled \"\" "
513	printf "\n must end with .f, .f90, .F, or .c !"
514	printf "\n use \"..\" for more than one file and wildcards"
515	printf "\n -s TEST compiles all files with w-permit"
516	printf "\n -S config file interpreted by shellscript ---"
517	printf "\n -t allowed cpu-time in seconds (batch) 0"
518	printf "\n -T tasks per node depending on -h"
519	printf "\n -u username on remote machine \"\" "
520	printf "\n -v no prompt for confirmation ---"
521	printf "\n -x tracing of mrun for debug purposes ---"
522	printf "\n -X # of processors (on parallel machines) 1"
523	printf "\n -y add appendix \"_O\" to all local output"
524	printf "\n files (ocean precursor runs followed by"
525	printf "\n coupled atmosphere-ocean runs) ---"
526	printf "\n -Y run coupled model, \"#1 #2\" with"
527	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
528	printf "\n "
529	printf "\n Possible values of positional parameter <modus>:"
530	printf "\n \"?\" - this outline \n\n") \| more
531	exit
532	elif [[ "$1" != "" ]]
533	then
534	printf "\n +++ positional parameter $1 unknown \n"
535	locat=parameter; exit
536	fi
537
538
539
540	# KURZE STARTMELDUNG
541	printf "\n*** $version "
542	printf "\n will be executed. Please wait ..."
543
544
545
546	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
547	if [[ ! -f $config_file ]]
548	then
549	printf "\n\n +++ configuration file: "
550	printf "\n $config_file"
551	printf "\n does not exist"
552	locat=connect; exit
553	fi
554
555
556	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
557	line=""
558	grep "%host_identifier" $config_file > tmp_mrun
559	while read line
560	do
561	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
562	then
563	HOSTNAME=`echo $line \| cut -d" " -s -f2`
564	host_identifier=`echo $line \| cut -d" " -s -f3`
565	if [[ $localhost_realname = $HOSTNAME ]]
566	then
567	localhost=$host_identifier
568	break
569	fi
570	fi
571	done < tmp_mrun
572
573	if [[ "$localhost" = "" ]]
574	then
575	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
576	printf "\n for local host \"$localhost_realname\"."
577	printf "\n Please add line"
578	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
579	printf "\n to the configuration file."
580	locat=localhost; exit
581	fi
582
583
584	# HOSTSPEZIFISCHE VARIABLEN SETZEN
585	case $localhost_realname in
586	(breg-en0\|berni-en0) archive_system=tivoli;;
587	(cs*) archive_system=ut;;
588	(fimm.bccs.uib.no) fimm=true;;
589	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
590	(hreg-en0\|hanni-en0) archive_system=tivoli;;
591	(scirocco) scirocco=true;;
592	esac
593
594
595
596	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
597	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
598	[[ "$afname" = "" ]] && afname=$fname
599
600
601	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
602	if [[ "$run_mode" != "" ]]
603	then
604	input_list="$input_list $run_mode"
605	output_list="$output_list $run_mode"
606	fi
607
608
609	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
610	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
611	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
612	# STARTET)
613	if [[ "$fromhost" = "" ]]
614	then
615	fromhost=$localhost
616	fi
617
618
619	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
620	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
621	then
622	source_list=TEST
623	local_compile=true
624	host=$localhost
625	fi
626
627
628	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
629	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
630	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
631	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
632	if [[ -n $host && "$host" != $localhost ]]
633	then
634	do_batch=true
635	do_remote=true
636	case $host in
637	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4\|lck) true;;
638	(*) printf "\n"
639	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
640	printf "\n is not available"
641	locat=nqs; (( iec = 0 )); exit;;
642	esac
643	else
644	host=$localhost
645	fi
646
647
648	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
649	if [[ -n $additional_conditions ]]
650	then
651	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
652	cond1=`echo $additional_conditions \| cut -d" " -f1`
653	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
654	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
655	if [[ -n $dummy ]]
656	then
657	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
658	locat=options; exit
659	fi
660	fi
661
662
663	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
664	if [[ $run_coupled_model = true ]]
665	then
666
667	if [[ -n $coupled_dist ]]
668	then
669
670	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
671	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
672
673	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
674	then
675
676	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
677	printf "\n PEs (total) : $numprocs"
678	printf "\n PEs (atmosphere): $numprocs_atmos"
679	printf "\n PEs (ocean) : $numprocs_ocean"
680	locat=coupling; exit
681
682	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
683	# THIS SHOULD BE REMOVED IN FUTURE
684	elif (( $numprocs_ocean != $numprocs_atmos ))
685	then
686
687	printf "\n +++ currently only 1:1 topologies are supported"
688	printf "\n PEs (total) : $numprocs"
689	printf "\n PEs (atmosphere): $numprocs_atmos"
690	printf "\n PEs (ocean) : $numprocs_ocean"
691	(( numprocs_atmos = $numprocs / 2 ))
692	(( numprocs_ocean = $numprocs / 2 ))
693	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
694
695	fi
696
697	else
698
699	(( numprocs_ocean = $numprocs / 2 ))
700	(( numprocs_atmos = $numprocs / 2 ))
701
702	fi
703	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
704
705	# GET coupled_mode FROM THE CONFIG FILE
706	line=""
707	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
708	while read line
709	do
710	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
711	then
712	coupled_mode="mpi2"
713	fi
714	done < tmp_mrun
715
716	fi
717
718
719	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
720	# ARCHIVIERUNG FEHLGESCHLAGEN IST
721	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
722	then
723	if [[ $ignore_archive_error = false ]]
724	then
725	printf "\n +++ data archiving of previous run failed"
726	printf "\n see directory \~/job_queue on remote machine"
727	locat=archive; exit
728	else
729	printf "\n +++ warning: data archiving in a previous run failed"
730	printf "\n MRUN continues, trying to get backup copy"
731	fi
732	fi
733
734
735
736	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
737	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
738	if [[ "$read_from_config" = false ]]
739	then
740
741	[[ $silent = false ]] && printf "\n Reading the configuration file... "
742	while read zeile
743	do
744	[[ $silent = false ]] && printf "."
745
746
747	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
748	# ERSETZEN
749	eval zeile=\"$zeile\"
750
751
752	# INTERPRETATION DER ZEILE
753	if [[ "$(echo $zeile)" = "" ]]
754	then
755	# LEERZEILE, KEINE AKTION
756	continue
757
758	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
759	then
760
761	# ZEILE IST KOMMENTARZEILE
762	true
763
764	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
765	then
766
767	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
768	zeile=$(echo $zeile \| cut -c2-)
769	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
770	var=`echo $zeile \| cut -d" " -f1`
771	value=`echo $zeile \| cut -d" " -s -f2`
772	for_host=`echo $zeile \| cut -d" " -s -f3`
773	for_cond1=`echo $zeile \| cut -d" " -s -f4`
774	for_cond2=`echo $zeile \| cut -d" " -s -f5`
775
776	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
777	then
778
779	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
780	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
781	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
782
783
784	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
785	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
786	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
787	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
788	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
789	# KONFIGURATIONSDATEI
790	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
791	then
792	eval $var=\$value
793
794	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
795	if [[ $do_trace = true ]]
796	then
797	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
798	fi
799	fi
800
801	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
802	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
803	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
804	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
805	if [[ $var = host ]]
806	then
807	if [[ -n $host && "$host" != $localhost ]]
808	then
809	do_batch=true
810	do_remote=true
811	case $host in
812	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lck) true;;
813	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
814	printf "\n is not available"
815	locat=nqs; exit;;
816	esac
817	else
818	host=$localhost
819	fi
820	fi
821
822	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
823	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
824	# DEN PROGRAMMEN BENOETIGT WERDEN
825	export $var
826	fi
827
828
829
830
831	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
832	then
833
834	# ZEILE DEFINIERT ERROR-KOMMANDO
835	(( iec = iec + 1 ))
836	zeile=$(echo $zeile \| cut -c4-)
837	err_command[$iec]="$zeile"
838
839	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
840	then
841
842	# ZEILE DEFINIERT INPUT-KOMMANDO
843	(( iic = iic + 1 ))
844	zeile=$(echo $zeile \| cut -c4-)
845	in_command[$iic]="$zeile"
846
847	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
848	then
849
850	# ZEILE DEFINIERT OUTPUT-KOMMANDO
851	(( ioc = ioc + 1 ))
852	zeile=$(echo $zeile \| cut -c4-)
853	out_command[$ioc]="$zeile"
854
855	else
856
857	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
858	# s2a: in/out - Feld
859	# s2b: loc - Feld (optional)
860	# s2c: tr/ar - Feld (optional)
861	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
862	s1=`echo $zeile \| cut -d" " -f1`
863	s2=`echo $zeile \| cut -d" " -s -f2`
864	s2a=$(echo $s2 \| cut -d":" -f1)
865	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
866	then
867	s2b=""
868	s2c=""
869	else
870	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
871	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
872	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
873	fi
874	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
875	s3=`echo $zeile \| cut -d" " -f3`
876	s4=`echo $zeile \| cut -d" " -s -f4`
877	s5=`echo $zeile \| cut -d" " -s -f5`
878	s6=`echo $zeile \| cut -d" " -s -f6`
879
880
881	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
882	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
883	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
884	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
885	# HANDEN SEIN MUSS (D.H. s2b = loc)
886	IFSALT="$IFS"; IFS="$IFS:"
887	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
888	then
889	found=false
890	for actual in $input_list
891	do
892	for formal in $s3
893	do
894	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
895	done
896	done
897	if [[ $found = true ]]
898	then
899	(( iin = iin + 1 ))
900	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
901	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
902	extin[$iin]=$s6
903	fi
904	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
905	then
906	found=false
907	for actual in $output_list
908	do
909	for formal in $s3
910	do
911	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
912	done
913	done
914	if [[ $found = true ]]
915	then
916	(( iout = iout + 1 ))
917	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
918	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
919	fi
920	elif [[ "$s2a" != in && "$s2a" != out ]]
921	then
922	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
923	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
924	locat=connect; exit
925	fi
926	IFS="$IFSALT"
927	fi
928	done < $config_file
929
930	else
931
932
933	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
934	[[ $silent = false ]] && printf "..."
935	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
936	export interpreted_config_file=.icf.$RANDOM
937
938
939
940	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
941	# VERFUEGUNG STELLEN
942	cat > .mrun_environment << %%END%%
943	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
944	config_file = '$config_file', do_remote = '$do_remote',
945	do_trace = '$do_trace', host = '$host',
946	input_list = '$input_list', icf = '$interpreted_config_file',
947	localhost = '$localhost', output_list = '$output_list' /
948
949	%%END%%
950
951	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
952	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
953	mrun_memory=$memory
954	mrun_group_number=$group_number
955	mrun_cpumax=$cpumax
956	mrun_numprocs=$numprocs
957
958	if [[ $localhost_realname = "sx-fep" ]]
959	then
960	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
961	else
962	interpret_config.x
963	fi
964	rm .mrun_environment
965
966
967	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
968	chmod u+x $interpreted_config_file
969	export PATH=$PATH:.
970	. $interpreted_config_file
971	rm $interpreted_config_file
972
973
974	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
975	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
976	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
977	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
978	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
979
980	fi
981
982
983	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
984	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
985	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
986	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
987	if [[ "$SOURCES_COMPLETE" = "" ]]
988	then
989
990	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
991	# VEREINBART WURDE
992	source_path=""
993	line=""
994	grep "%source_path" $config_file > tmp_mrun
995	while read line
996	do
997	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
998	then
999	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
1000	then
1001	global_source_path=`echo $line \| cut -d" " -f2`
1002	fi
1003	fi
1004	done < tmp_mrun
1005
1006	line=""
1007	found=false
1008	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
1009	while read line
1010	do
1011	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1012	then
1013	if [[ $found = true ]]
1014	then
1015	printf "\n\n +++ more than one source path found in configuration file"
1016	printf "\n for local host \"$localhost\" "
1017	locat=source_path; exit
1018	fi
1019	source_path=`echo $line \| cut -d" " -f2`
1020	found=true
1021	fi
1022	done < tmp_mrun
1023	rm tmp_mrun
1024
1025	if [[ "$source_path" = "" ]]
1026	then
1027	if [[ "$global_source_path" != "" ]]
1028	then
1029	source_path=$global_source_path
1030	else
1031	printf "\n\n +++ no source path found in configuration file"
1032	printf "\n for local host \"$localhost\" "
1033	locat=source_path; exit
1034	fi
1035	fi
1036	eval source_path=$source_path
1037
1038	if [[ ! -d $source_path ]]
1039	then
1040	printf "\n\n +++ source path \"$source_path\" on local host"
1041	printf "\n \"$localhost\" does not exist"
1042	locat=source_path; exit
1043	fi
1044
1045	fi
1046
1047
1048	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1049	# DURCH OPTION -G MITGETEILT)
1050	if [[ "$global_revision" = "" ]]
1051	then
1052	global_revision=`svnversion $source_path 2>/dev/null`
1053	global_revision="Rev: $global_revision"
1054	fi
1055
1056
1057	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1058	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1059	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1060	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1061	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1062	if [[ -n $host && "$host" != $localhost ]]
1063	then
1064	do_batch=true
1065	do_remote=true
1066	case $host in
1067	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lck) true;;
1068	(*) printf "\n"
1069	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1070	printf "\n is not available"
1071	locat=nqs; (( iec = 0 )); exit;;
1072	esac
1073	else
1074	host=$localhost
1075	fi
1076
1077
1078	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1079	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1080	then
1081
1082	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1083	if [[ ! -n $numprocs ]]
1084	then
1085	printf "\n"
1086	printf "\n +++ option \"-K parallel\" requires additional specification"
1087	printf "\n of the number of processors to be used by"
1088	printf "\n mrun-option \"-X\" or by environment-variable"
1089	printf "\n \"numprocs\" in the configuration file"
1090	locat=numprocs; (( iec = 0 )); exit
1091	fi
1092
1093	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1094	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1095	# GESAMTPROZESSORANZAHL IST
1096	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1097	then
1098	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1099	(( ival = $tasks_per_node ))
1100	(( pes = numprocs ))
1101	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1102	# then
1103	# (( pes = pes - 1 ))
1104	# fi
1105	(( ii = pes / ival ))
1106	if (( pes - ii * ival > 0 ))
1107	then
1108	printf "\n"
1109	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1110	printf "\n divisor of the total number of processors (option \"-X\")"
1111	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1112	locat=tasks_per_node; (( iec = 0 )); exit
1113	fi
1114	fi
1115
1116	# IBMY HAT NUR EINEN KNOTEN
1117	if [[ $host = ibmy ]]
1118	then
1119	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1120	then
1121	printf "\n"
1122	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1123	printf "\n total number of processors (option \"-X\")"
1124	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1125	locat=tasks_per_node; (( iec = 0 )); exit
1126	fi
1127	fi
1128
1129	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1130	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1131	if [[ $use_openmp = true ]]
1132	then
1133	threads_per_task=$tasks_per_node
1134	tasks_per_node=1
1135	fi
1136	OOPT="-O $threads_per_task"
1137	TOPT="-T $tasks_per_node"
1138
1139	# GESAMTZAHL DER KNOTEN BESTIMMEN
1140	if [[ "$tasks_per_node" != "" ]]
1141	then
1142	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1143	fi
1144
1145	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1146	# SETZEN
1147	if [[ $node_usage = default ]]
1148	then
1149	if [[ $host = ibms ]]
1150	then
1151	node_usage=shared
1152	elif [[ $host = lctit ]]
1153	then
1154	node_usage=RAM64GB
1155	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1156	then
1157	node_usage=singlejob
1158	else
1159	node_usage=not_shared
1160	fi
1161	fi
1162
1163	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
1164	then
1165	printf "\n"
1166	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1167	printf "\n \"shared\" or \"not_shared\""
1168	locat=tasks_per_node; (( iec = 0 )); exit
1169	fi
1170
1171	fi
1172
1173	# PRUEFEN, OB HOSTFILE EXISTIERT
1174	if [[ -n $hostfile ]]
1175	then
1176	if [[ ! -f $hostfile ]]
1177	then
1178	printf "\n"
1179	printf "\n +++ hostfile \"$hostfile\" does not exist"
1180	locat=hostfile; exit
1181	fi
1182	fi
1183
1184	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1185	if [[ $host = ibmy && $do_remote = false ]]
1186	then
1187	if [[ ! -f $HOME/.rhosts ]]
1188	then
1189	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1190	printf "\n\n *** file:"
1191	printf "\n $HOME/.rhosts"
1192	printf "\n was created\n"
1193	fi
1194	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1195	then
1196	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1197	printf "\n\n *** file:"
1198	printf "\n $HOME/.rhosts"
1199	printf "\n was extended by the name of the current host\n"
1200	fi
1201	fi
1202
1203
1204
1205	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1206	if [[ $queue = none ]]
1207	then
1208	case $host in
1209	(ibmb) if [[ $node_usage = shared ]]
1210	then
1211	queue=cshare
1212	else
1213	queue=csolo
1214	fi;;
1215	(ibmh) queue=no_class;;
1216	(ibmy) queue=parallel;;
1217	(lcsgib) queue=bigq;;
1218	(lcsgih) queue=bigq;;
1219	(lctit) queue=RAM64GB;;
1220	(nech) queue=none;;
1221	(necriam) queue=SP;;
1222	(unics) queue=unics;;
1223	esac
1224	fi
1225
1226
1227	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1228	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1229	# ERMITTELN
1230	(( i = 0 ))
1231	while (( i < iin ))
1232	do
1233	(( i = i + 1 ))
1234	(( maxcycle = 0 ))
1235
1236	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1237	if [[ "${actionin[$i]}" = di ]]
1238	then
1239	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1240	# REM-MASCHINE AUSWERTEN
1241	eval filename=${pathin[$i]}/${endin[$i]}
1242	else
1243	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1244	# REM-MASCHINE AUSWERTEN
1245	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1246	fi
1247
1248	# PRUEFEN AUF VORHANDENSEIN
1249	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1250	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1251	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1252	then
1253	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1254	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1255	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1256	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1257	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1258	if [[ "${transin[$i]}" != "locopt" ]]
1259	then
1260	printf "\n\n +++ INPUT-file: "
1261	if [[ "${extin[$i]}" = "" ]]
1262	then
1263	printf "\n $filename"
1264	else
1265	printf "\n $filename.${extin[$i]}"
1266	fi
1267	printf "\n does not exist\n"
1268	locat=input; exit
1269	else
1270	transin[$i]="unavailable"
1271	fi
1272	else
1273
1274	# ZYKLUSNUMMER FESTSTELLEN
1275	ls -1 -d $filename > filelist 2>/dev/null
1276	ls -1 -d $filename.* >> filelist 2>/dev/null
1277	while read zeile
1278	do
1279	cycle=$(print $zeile \| cut -f2 -d".")
1280	if [[ "$cycle" = "$zeile" ]]
1281	then
1282	(( icycle = 0 ))
1283	elif [[ "$cycle" = "${extin[$i]}" ]]
1284	then
1285	(( icycle = 0 ))
1286	else
1287	(( icycle = $cycle ))
1288	fi
1289	if (( icycle > maxcycle ))
1290	then
1291	(( maxcycle = icycle ))
1292	file_to_be_used=$zeile
1293	fi
1294	done <filelist
1295	rm filelist
1296
1297	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1298	if (( maxcycle > 0 ))
1299	then
1300	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1301	then
1302	filename=${filename}.$maxcycle.${extin[$i]}
1303	else
1304	filename=${filename}.$maxcycle
1305	fi
1306	else
1307	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1308	then
1309	filename=${filename}.${extin[$i]}
1310	fi
1311	fi
1312
1313	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1314	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1315	absnamein[$i]=$filename
1316	if (( maxcycle > 0 ))
1317	then
1318	if [[ "${actionin[$i]}" = di ]]
1319	then
1320	frelin[$i]=${endin[$i]}.$maxcycle
1321	else
1322	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1323	fi
1324	else
1325	if [[ "${actionin[$i]}" = di ]]
1326	then
1327	frelin[$i]=${endin[$i]}
1328	else
1329	frelin[$i]=${afname}${endin[$i]}
1330	fi
1331	fi
1332
1333	fi
1334	done
1335
1336
1337	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1338	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1339	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1340	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1341	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1342	(( i = 0 ))
1343	while (( i < iout ))
1344	do
1345	(( i = i + 1 ))
1346	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1347	then
1348	if [[ "${actionout[$i]}" = tr ]]
1349	then
1350	actionout[$i]=""
1351	elif [[ "${actionout[$i]}" = trpe ]]
1352	then
1353	actionout[$i]=pe
1354	elif [[ "${actionout[$i]}" = tra ]]
1355	then
1356	actionout[$i]=a
1357	fi
1358	(( maxcycle = 0 ))
1359	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1360	eval catalogname=${pathout[$i]}
1361	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1362	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1363	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1364	then
1365
1366	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1367	if cat /dev/null > $filename
1368	then
1369	rm $filename
1370	else
1371
1372	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1373	if [[ ! -d $catalogname ]]
1374	then
1375	if mkdir -p $catalogname
1376	then
1377	printf "\n\n *** directory:"
1378	printf "\n $catalogname"
1379	printf "\n was created\n"
1380	else
1381	printf "\n\n +++ OUTPUT-file:"
1382	printf "\n $filename"
1383	printf "\n cannot be created, because directory does not exist"
1384	printf "\n and cannot be created either"
1385	printf "\n"
1386	locat=output ; exit
1387	fi 2>/dev/null
1388	else
1389	printf "\n\n +++ OUTPUT-file:"
1390	printf "\n $filename"
1391	printf "\n cannot be created, although directory exists"
1392	printf "\n"
1393	locat=output ; exit
1394	fi
1395	fi 2>/dev/null
1396	else
1397
1398	# ZYKLUSNUMMER FESTSTELLEN
1399	ls -1 -d $filename > filelist 2>/dev/null
1400	ls -1 -d $filename.* >> filelist 2>/dev/null
1401	while read zeile
1402	do
1403	cycle=$(print $zeile \| cut -f2 -d".")
1404	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1405	then
1406	(( icycle = 1 ))
1407	else
1408	(( icycle = $cycle + 1 ))
1409	fi
1410	if (( icycle > maxcycle ))
1411	then
1412	(( maxcycle = icycle ))
1413	fi
1414	done <filelist
1415	rm filelist
1416	fi
1417
1418	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1419	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1420	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1421	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1422	if [[ "${actionout[$i]}" != a ]]
1423	then
1424	if (( maxcycle > 0 ))
1425	then
1426	filename=${filename}.$maxcycle
1427	if cat /dev/null > $filename
1428	then
1429	rm $filename
1430	else
1431	printf "\n +++ OUTPUT-file:"
1432	printf "\n $filename"
1433	printf "\n cannot be created"
1434	locat=output ; exit
1435	fi
1436	fi
1437	else
1438	(( maxcycle = maxcycle - 1 ))
1439	if (( maxcycle > 0 ))
1440	then
1441	filename=${filename}.$maxcycle
1442	fi
1443	fi
1444
1445	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1446	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1447	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1448	pathout[$i]=$filename
1449	if (( maxcycle > 0 ))
1450	then
1451	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1452	else
1453	frelout[$i]=${fname}${endout[$i]}
1454	fi
1455
1456	fi
1457	done
1458
1459
1460	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1461	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1462	then
1463	if [[ "$dvr_inc" = "" ]]
1464	then
1465	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
1466	printf "\n This is required for the dvrp_graphics package.\n"
1467	locat=dvr; exit
1468	fi
1469	if [[ "$dvr_lib" = "" ]]
1470	then
1471	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
1472	printf "\n This is required for the dvrp_graphics package.\n"
1473	locat=dvr; exit
1474	fi
1475	fi
1476
1477
1478	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1479	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1480	# UEBERSETZT ZU WERDEN)
1481	if [[ "$mainprog" = "" && "$executable" = "" ]]
1482	then
1483	printf "\n +++ neither main program nor executable defined"
1484	locat=source; exit
1485	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1486	then
1487	printf "\n +++ main program as well as executable defined"
1488	locat=source; exit
1489	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1490	then
1491	do_compile=false
1492	fi
1493
1494
1495	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1496	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1497	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1498	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1499	then
1500	rm -rf SOURCES_FOR_RUN_$fname
1501	mkdir SOURCES_FOR_RUN_$fname
1502	fi
1503
1504
1505	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1506	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1507	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1508	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1509	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1510	then
1511
1512	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1513	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1514
1515
1516	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1517	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1518	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1519	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1520	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1521	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1522	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1523	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1524	# GESAMMELT
1525	if [[ "$source_list" = WRITE_PERMIT ]]
1526	then
1527
1528	source_list=""
1529	cd $source_path
1530
1531
1532	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1533	Names=$(ls -1 *.f90 2>&1)
1534	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1535	Names=$(ls -1 *.F90 2>&1)
1536	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1537	Names=$(ls -1 *.F 2>&1)
1538	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1539	Names=$(ls -1 *.f 2>&1)
1540	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1541	Names=$(ls -1 *.c 2>&1)
1542	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1543
1544
1545	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1546	for dateiname in $Filenames
1547	do
1548	if [[ -w $dateiname ]]
1549	then
1550	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1551	then
1552	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1553	source_list=$source_list"$dateiname "
1554	fi
1555	fi
1556	done
1557
1558	cd - > /dev/null
1559
1560
1561	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1562	then
1563
1564	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1565	source_list=""
1566	cd $source_path
1567
1568
1569	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1570	if [[ ! -d .svn ]]
1571	then
1572	printf "\n\n +++ source directory"
1573	printf "\n \"$source_path\" "
1574	printf "\n is not under control of \"subversion\"."
1575	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
1576	fi
1577
1578
1579	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1580	Filenames=""
1581	svn status > tmp_mrun
1582	while read line
1583	do
1584	firstc=`echo $line \| cut -c1`
1585	if [[ $firstc = M \|\| $firstc = "?" ]]
1586	then
1587	Name=`echo "$line" \| cut -c8-`
1588	extension=`echo $Name \| cut -d. -f2`
1589	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1590	then
1591	Filenames="$Filenames "$Name
1592	fi
1593	fi
1594	done < tmp_mrun
1595
1596
1597	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1598	for dateiname in $Filenames
1599	do
1600	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1601	source_list=$source_list"$dateiname "
1602	done
1603
1604	cd - > /dev/null
1605
1606
1607	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1608	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1609	# VORHANDEN
1610	elif [[ "$source_list" != "" && $restart_run != true ]]
1611	then
1612
1613	cd $source_path
1614
1615	for filename in $source_list
1616	do
1617
1618	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1619	if [[ $(print $filename \| grep -c "/") != 0 ]]
1620	then
1621	printf "\n +++ source code file: $filename"
1622	printf "\n must not contain (\"/\") "
1623	locat=source; exit
1624	fi
1625
1626	if [[ ! -f $filename ]]
1627	then
1628	printf "\n +++ source code file: $filename"
1629	printf "\n does not exist"
1630	locat=source; exit
1631	else
1632	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1633	fi
1634
1635	done
1636
1637	cd - > /dev/null
1638
1639	fi
1640
1641
1642	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1643	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1644	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1645	if [[ $restart_run != true ]]
1646	then
1647
1648	if [[ ! -f "$source_path/$mainprog" ]]
1649	then
1650	printf "\n\n +++ main program: $mainprog"
1651	printf "\n does not exist in source directory"
1652	printf "\n \"$source_path\"\n"
1653	locat=source; exit
1654	else
1655	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1656	then
1657	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1658	source_list=${mainprog}" $source_list"
1659	fi
1660	fi
1661	fi
1662
1663
1664	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1665	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1666	if [[ "$restart_run" != true ]]
1667	then
1668	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1669	if [[ ! -f $makefile ]]
1670	then
1671	printf "\n +++ file \"$makefile\" does not exist"
1672	locat=make; exit
1673	else
1674	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1675	fi
1676	fi
1677
1678
1679	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1680	if [[ $restart_run != true && "$add_source_path" != "" ]]
1681	then
1682
1683	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1684	if [[ ! -d $add_source_path ]]
1685	then
1686	printf "\n\n +++ WARNING: additional source code directory"
1687	printf "\n \"$add_source_path\" "
1688	printf "\n does not exist or is not a directory."
1689	printf "\n No source code will be used from this directory!\n"
1690	add_source_path=""
1691	sleep 3
1692	else
1693
1694	cd $add_source_path
1695	found=false
1696
1697	Names=$(ls -1 *.f90 2>&1)
1698	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1699	Names=$(ls -1 *.F90 2>&1)
1700	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1701	Names=$(ls -1 *.F 2>&1)
1702	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1703	Names=$(ls -1 *.f 2>&1)
1704	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1705	Names=$(ls -1 *.c 2>&1)
1706	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1707
1708	cd - > /dev/null
1709	cd SOURCES_FOR_RUN_$fname
1710
1711	# COPY MAKEFILE IF EXISTING
1712	if [[ -f $add_source_path/Makefile ]]
1713	then
1714	printf "\n\n *** user Makefile from directory"
1715	printf "\n \"$add_source_path\" is used \n"
1716	sleep 1
1717	cp $add_source_path/Makefile .
1718	fi
1719
1720	for dateiname in $AddFilenames
1721	do
1722	if [[ -f $dateiname ]]
1723	then
1724	printf "\n +++ source code file \"$dateiname\" found in additional"
1725	printf "\n source code directory \"$add_source_path\" "
1726	printf "\n but was also given with option \"-s\" which means that it should be taken"
1727	printf "\n from directory \"$source_path\"."
1728	locat=source; exit
1729	fi
1730
1731	cp $add_source_path/$dateiname .
1732	source_list="$source_list $dateiname"
1733
1734	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1735	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1736	then
1737	printf "\n\n +++ user file \"$dateiname\" "
1738	printf "\n is not listed in Makefile \n"
1739	locat=source; exit
1740	else
1741
1742	# Default User-Interface von der Liste entfernen, falls Datei
1743	# ein User-Interface enthaelt
1744	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1745	# then
1746	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1747	# then
1748	# rm -rf user_interface.f90
1749	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1750	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1751	# printf "\n since a user-interface is found in file"
1752	# printf "\n \"$add_source_path/$dateiname\" \n"
1753	# sleep 3
1754	# else
1755	if [[ $found = false ]]
1756	then
1757	found=true
1758	printf "\n\n *** following user file(s) added to the"
1759	printf " files to be translated:\n "
1760	fi
1761	printf "$dateiname "
1762	sleep 0.5
1763	fi
1764	done
1765	[[ $found = true ]] && printf "\n"
1766	cd - > /dev/null
1767	fi
1768	fi
1769
1770
1771	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1772	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1773	if [[ $restart_run != true && -n $package_list ]]
1774	then
1775
1776	cd $source_path
1777
1778	for package in $package_list
1779	do
1780
1781	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1782
1783	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1784	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1785	# LIEFERT
1786	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1787
1788
1789	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1790	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1791	for source_list_name in $package_source_list
1792	do
1793	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1794	then
1795
1796	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1797	ending=`echo $source_list_name \| cut -f2 -d.`
1798	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1799	then
1800	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1801	source_list="$source_list $source_list_name"
1802	fi
1803	fi
1804	done
1805	done
1806
1807	cd - > /dev/null
1808	fi
1809
1810
1811	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1812	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1813	# if [[ "$restart_run" != true ]]
1814	# then
1815	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1816	# if [[ ! -f $makefile ]]
1817	# then
1818	# printf "\n +++ file \"$makefile\" does not exist"
1819	# locat=make; exit
1820	# else
1821	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1822	# fi
1823	# fi
1824
1825	fi # do_compile=true
1826
1827
1828	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1829	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1830	if [[ $do_compile = true ]]
1831	then
1832
1833	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1834	# ZUSAMMENSETZEN
1835	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1836	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1837	then
1838	cpp_options="${cpp_options},-D__ibm=__ibm"
1839	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1840	then
1841	cpp_options="$cpp_options -D__nec"
1842	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1843	then
1844	cpp_options="$cpp_options -D__lc"
1845	else
1846	cpp_options="$cpp_options -D__$localhost"
1847	fi
1848
1849	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1850	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1851	then
1852	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1853	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1854	else
1855	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1856	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1857	fi
1858
1859	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1860	if [[ -n $package_list ]]
1861	then
1862	for package in $package_list
1863	do
1864	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1865	then
1866	if [[ $package != "dvrp_graphics+1PE" ]]
1867	then
1868	cpp_options="${cpp_options},-D__$package=__$package"
1869	else
1870	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1871	export use_seperate_pe_for_dvrp_output=true
1872	fi
1873	else
1874	if [[ $package != "dvrp_graphics+1PE" ]]
1875	then
1876	cpp_options="$cpp_options -D__$package"
1877	else
1878	cpp_options="$cpp_options -D__dvrp_graphics"
1879	export use_seperate_pe_for_dvrp_output=true
1880	fi
1881	fi
1882	done
1883	fi
1884
1885	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1886	if [[ -n $cpp_opts ]]
1887	then
1888	for popts in $cpp_opts
1889	do
1890	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1891	then
1892	cpp_options="${cpp_options},-D__$popts=__$popts"
1893	else
1894	cpp_options="$cpp_options -D__$popts"
1895	fi
1896	done
1897	fi
1898
1899	else
1900
1901
1902	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1903	if [[ $do_remote = false ]]
1904	then
1905	if [[ ! -f $executable ]]
1906	then
1907	printf "\n +++ executable file: $executable"
1908	printf "\n does not exist"
1909	locat=executable; exit
1910	fi
1911	fi
1912	fi
1913
1914
1915	# JOBMODUS FESTSTELLEN
1916	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1917	then
1918	jobmo=BATCH
1919	else
1920	jobmo=INTERACTIVE
1921	fi
1922
1923
1924	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1925	# DURCH BENUTZER ANDERWEITIG VEREINBART
1926	if [[ "$compiler_name" = "" ]]
1927	then
1928
1929	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
1930	locat=compiler_name; exit
1931
1932	fi
1933
1934
1935	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
1936	[[ $localhost = necriam ]] && compiler_name=mpif90
1937
1938
1939
1940	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1941	kennung=$RANDOM
1942	if [[ "$tmp_user_catalog" = "" ]]
1943	then
1944	if [[ $localhost = ibmh ]]
1945	then
1946	tmp_user_catalog=$SCRATCH
1947	elif [[ $localhost = nech ]]
1948	then
1949	tmp_user_catalog=$WRKSHR
1950	else
1951	tmp_user_catalog=/tmp
1952	fi
1953	fi
1954	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1955
1956
1957	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1958	# BESTIMMEN
1959	if [[ "$tmp_data_catalog" = "" ]]
1960	then
1961	if [[ $localhost = ibmb ]]
1962	then
1963	tmp_data_catalog=$WORK/mrun_restart_data
1964	elif [[ $localhost = nech ]]
1965	then
1966	tmp_data_catalog=$WRKSHR/mrun_restart_data
1967	else
1968	tmp_data_catalog=/tmp/mrun_restart_data
1969	fi
1970	fi
1971
1972
1973	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1974	# ERSETZEN
1975	if [[ $do_remote = false && $do_compile = true ]]
1976	then
1977	eval fopts=\"$fopts\"
1978	eval lopts=\"$lopts\"
1979	fi
1980
1981
1982
1983	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1984	fopts="$fopts $netcdf_inc $dvr_inc"
1985	lopts="$lopts $netcdf_lib $dvr_lib"
1986	ROPTS="$ropts"
1987	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 \|\| $host = lck ) && -n $numprocs ]]
1988	then
1989	XOPT="-X $numprocs"
1990	fi
1991
1992
1993
1994	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1995	# GRAMM BENOETIGT
1996	done=false
1997	while [[ $done = false ]]
1998	do
1999	cputime=$cpumax
2000	if (( $cputime == 0 ))
2001	then
2002	if [[ $do_batch = true ]]
2003	then
2004	printf "\n +++ cpu-time is undefined"
2005	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
2006	printf "\n >>> "
2007	read cputime 1>/dev/null 2>&1
2008	else
2009	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
2010	fi
2011	else
2012	done=true
2013	fi
2014	cpumax=$cputime
2015	done
2016
2017	(( minuten = cputime / 60 ))
2018	(( sekunden = cputime - minuten * 60 ))
2019
2020
2021	# PRUEFEN DER KERNSPEICHERANFORDERUNG
2022	if [[ $do_batch = true ]]
2023	then
2024	done=false
2025	while [[ $done = false ]]
2026	do
2027	if (( memory == 0 ))
2028	then
2029	printf "\n +++ memory demand is undefined"
2030	printf "\n >>> Please type memory in MByte per process as INTEGER:"
2031	printf "\n >>> "
2032	read memory 1>/dev/null 2>&1
2033	else
2034	done=true
2035	fi
2036	done
2037	fi
2038
2039
2040	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2041	if [[ $do_remote = true && -z $remote_username ]]
2042	then
2043	while [[ -z $remote_username ]]
2044	do
2045	printf "\n +++ username on remote host \"$host\" is undefined"
2046	printf "\n >>> Please type username:"
2047	printf "\n >>> "
2048	read remote_username
2049	done
2050	mc="$mc -u$remote_username"
2051	fi
2052
2053
2054	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
2055	if [[ $host = lcsgib \|\| $host = lcsgih ]]
2056	then
2057	[[ "$mpilib" = "" ]] && export mpilib=mpt
2058	fi
2059
2060
2061
2062	###########################################################################
2063	# HEADER-AUSGABE
2064	###########################################################################
2065
2066
2067	calltime=$(date)
2068	printf "\n"
2069	# [[ $silent = false ]] && clear
2070	printf "#--------------------------------------------------------------# \n"
2071	printf "\| $version$calltime \| \n"
2072	printf "\| \| \n"
2073	spalte1="called on:"; spalte2=$localhost_realname
2074	printf "\| $spalte1$spalte2 \| \n"
2075	if [[ $local_compile = false ]]
2076	then
2077	if [[ $do_remote = true ]]
2078	then
2079	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2080	else
2081	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2082	fi
2083	else
2084	spalte1="compiling test only!"; spalte2=""
2085	fi
2086	printf "\| $spalte1$spalte2 \| \n"
2087	if [[ -n $numprocs ]]
2088	then
2089	spalte1="number of PEs:"; spalte2=$numprocs
2090	printf "\| $spalte1$spalte2 \| \n"
2091	fi
2092	if [[ -n $tasks_per_node ]]
2093	then
2094	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2095	printf "\| $spalte1$spalte2 \| \n"
2096	fi
2097	if [[ $threads_per_task != 1 ]]
2098	then
2099	spalte1="threads per task:"; spalte2="$threads_per_task"
2100	printf "\| $spalte1$spalte2 \| \n"
2101	fi
2102	printf "\| \| \n"
2103	if [[ $do_compile = true ]]
2104	then
2105	spalte1=cpp-directives:; spalte2=$cpp_options
2106	printf "\| $spalte1$spalte2 \| \n"
2107	zeile=$(echo "$cpp_options" \| cut -c41-)
2108	while [[ "$zeile" != "" ]]
2109	do
2110	spalte1=""
2111	spalte2=$zeile
2112	printf "\| $spalte1$spalte2 \| \n"
2113	zeile=$(echo "$zeile" \| cut -c41-)
2114	done
2115
2116	spalte1=compiler-options:; spalte2="$fopts"
2117	printf "\| $spalte1$spalte2 \| \n"
2118	zeile=$(echo "$fopts" \| cut -c41-)
2119	while [[ "$zeile" != "" ]]
2120	do
2121	spalte1=""
2122	spalte2=$zeile
2123	printf "\| $spalte1$spalte2 \| \n"
2124	zeile=$(echo "$zeile" \| cut -c41-)
2125	done
2126
2127	spalte1=linker-options:; spalte2=$lopts
2128	printf "\| $spalte1$spalte2 \| \n"
2129	zeile=$(echo "$lopts" \| cut -c41-)
2130	while [[ "$zeile" != "" ]]
2131	do
2132	spalte1=""
2133	spalte2=$zeile
2134	printf "\| $spalte1$spalte2 \| \n"
2135	zeile=$(echo "$zeile" \| cut -c41-)
2136	done
2137
2138	spalte1="main program":; spalte2=$mainprog
2139	printf "\| $spalte1$spalte2 \| \n"
2140	else
2141	spalte1=executable:; spalte2=$executable
2142	printf "\| $spalte1$spalte2 \| \n"
2143	fi
2144	printf "\| \| \n"
2145	spalte1="base name of files":; spalte2=$fname
2146	printf "\| $spalte1$spalte2 \| \n"
2147	if [[ $fname != $afname ]]
2148	then
2149	spalte1="base name of input files":; spalte2=$afname
2150	printf "\| $spalte1$spalte2 \| \n"
2151	fi
2152	spalte1="INPUT control list":; spalte2=$input_list
2153	printf "\| $spalte1$spalte2 \| \n"
2154	spalte1="OUTPUT control list":; spalte2=$output_list
2155	printf "\| $spalte1$spalte2 \| \n"
2156
2157	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2158	then
2159	spalte1="memory demand / PE":; spalte2="$memory MB"
2160	printf "\| $spalte1$spalte2 \| \n"
2161	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2162	printf "\| $spalte1$spalte2 \| \n"
2163	fi
2164
2165	if [[ $do_compile = true ]]
2166	then
2167	printf "\| \| \n"
2168	printf "\| Files to be compiled: \| \n"
2169	zeile=$source_list
2170	while [[ "$zeile" != "" ]]
2171	do
2172	spalte3=$zeile
2173	printf "\| $spalte3 \| \n"
2174	zeile=$(echo "$zeile" \| cut -c61-)
2175	done
2176	fi
2177	printf "#--------------------------------------------------------------#"
2178
2179
2180
2181	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2182	if [[ $do_trace = true ]]
2183	then
2184	(( i = 0 ))
2185	while (( i < iin ))
2186	do
2187	(( i = i + 1 ))
2188	if (( i == 1 ))
2189	then
2190	printf "\n\n >>> INPUT-file assignments:\n"
2191	fi
2192	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2193	done
2194	(( i = 0 ))
2195	while (( i < iout ))
2196	do
2197	(( i = i + 1 ))
2198	if (( i == 1 ))
2199	then
2200	printf "\n\n >>> OUTPUT-file assignments:\n"
2201	fi
2202	printf "\n ${localout[$i]} : ${pathout[$i]}"
2203	done
2204	(( i = 0 ))
2205	while (( i < iic ))
2206	do
2207	(( i = i + 1 ))
2208	if (( i == 1 ))
2209	then
2210	printf "\n\n >>> INPUT-commands:\n"
2211	fi
2212	printf "\n ${in_command[$i]}"
2213	done
2214	(( i = 0 ))
2215	while (( i < ioc ))
2216	do
2217	(( i = i + 1 ))
2218	if (( i == 1 ))
2219	then
2220	printf "\n\n >>> OUTPUT-commands:\n"
2221	fi
2222	printf "\n ${out_command[$i]}"
2223	done
2224	fi
2225
2226
2227	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2228	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2229	then
2230	antwort=dummy
2231	printf "\n\n"
2232	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2233	do
2234	printf " >>> everything o.k. (y/n) ? "
2235	read antwort
2236	done
2237	if [[ $antwort = n \|\| $antwort = N ]]
2238	then
2239	locat=user_abort; (( iec = 0 )); exit
2240	fi
2241	if [[ $do_batch = true ]]
2242	then
2243	printf " >>> batch-job will be created and submitted"
2244	else
2245	if [[ $local_compile = false ]]
2246	then
2247	printf " >>> MRUN will now continue to execute on this machine"
2248	else
2249	printf " >>> a test compilation will now be carried out on this machine"
2250	fi
2251	fi
2252	fi
2253
2254
2255
2256
2257	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2258	# CHENDE AKTIONEN DURCHGEFUEHRT
2259	if [[ $do_batch = false ]]
2260	then
2261
2262
2263	# TEMPORAEREN KATALOG ERZEUGEN
2264	mkdir -p $TEMPDIR
2265	chmod go+rx $TEMPDIR
2266	tmpcreate=true
2267
2268
2269	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2270	# TEMPORAERES VERZEICHNIS KOPIEREN
2271	if [[ $do_compile = true ]]
2272	then
2273
2274	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2275	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2276	if [[ $localhost = nech ]]
2277	then
2278	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2279	if mkdir -p $TEMPDIR_COMPILE
2280	then
2281	printf "\n *** \"$TEMPDIR_COMPILE\" "
2282	printf "\n is generated as temporary directory for cross compiling\n"
2283	else
2284	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2285	printf "\n needed for cross compilation failed"
2286	locat=compile
2287	exit
2288	fi
2289	else
2290	TEMPDIR_COMPILE=$TEMPDIR
2291	fi
2292
2293
2294	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2295	line=""
2296	grep "%depository_path" $config_file > tmp_mrun
2297	while read line
2298	do
2299	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2300	then
2301	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2302	then
2303	global_depository_path=`echo $line \| cut -d" " -s -f2`
2304	fi
2305	fi
2306	done < tmp_mrun
2307
2308	line=""
2309	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2310	while read line
2311	do
2312	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2313	then
2314	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2315	then
2316	local_depository_path=`echo $line \| cut -d" " -s -f2`
2317	fi
2318	fi
2319	done < tmp_mrun
2320
2321	if [[ "$local_depository_path" = "" ]]
2322	then
2323	if [[ "$global_depository_path" != "" ]]
2324	then
2325	local_depository_path=$global_depository_path
2326	else
2327	printf "\n\n +++ no depository path found in configuration file"
2328	printf "\n for local host \"$localhost\" "
2329	printf "\n please set \"\%depository_path\" in configuration file\n"
2330	locat=config_file; exit
2331	fi
2332	fi
2333	eval local_depository_path=$local_depository_path
2334	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
2335	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
2336
2337
2338	basename=`print $mainprog \| cut -f1 -d"."`
2339	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2340	if [[ ! -f $make_depository ]]
2341	then
2342	printf "\n"
2343	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2344	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2345	else
2346	cp $make_depository $TEMPDIR_COMPILE
2347	cd $TEMPDIR_COMPILE
2348	tar -xf $make_depository > /dev/null 2>&1
2349	cd - > /dev/null
2350	fi
2351
2352	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2353
2354	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2355	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2356	# MAKEFILE EINTRAGEN
2357	# cd $TEMPDIR_COMPILE
2358	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2359	# if [[ "$interface_file" != "" ]]
2360	# then
2361	# interface_file=`echo $interface_file \| cut -d"." -f1`
2362	# mv Makefile Makefile_old
2363	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2364	# fi
2365	# cd - > /dev/null
2366	else
2367	cp $executable ${TEMPDIR}/a.out
2368	fi
2369
2370
2371	# WECHSEL IN TEMPORAEREN KATALOG
2372	cd $TEMPDIR
2373	printf "\n *** changed to temporary directory: $TEMPDIR"
2374
2375
2376	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2377	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2378	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2379	# ERMITTELN
2380	(( i = 0 ))
2381	while (( i < iout ))
2382	do
2383	(( i = i + 1 ))
2384	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2385	then
2386	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2387	else
2388	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2389	fi
2390	done
2391
2392
2393	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2394	if [[ $do_compile = true ]]
2395	then
2396
2397
2398	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2399	printf "\n\n\n *** compilation starts \n$striche\n"
2400	printf " *** compilation with make using following options:\n"
2401	printf " make depository: $make_depository"
2402	printf " compilername: $compiler_name\n"
2403	printf " options: $fopts\n"
2404	printf " preprocessor-directives: $cpp_options \n"
2405	printf " linker-options: $lopts \n"
2406	printf " source code files: $source_list \n"
2407
2408	if [[ $localhost = nech ]]
2409	then
2410	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2411	cp $TEMPDIR_COMPILE/a.out .
2412	[[ $? != 0 ]] && compile_error=true
2413	rm -rf $TEMPDIR_COMPILE
2414	elif [[ $localhost = ibmh ]]
2415	then
2416	printf " compiler is called via ssh on \"plogin1\" \n"
2417	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2418	[[ ! -f a.out ]] && compile_error=true
2419	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2420	elif [[ $localhost = lcsgib ]]
2421	then
2422	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
2423	ssh 130.73.232.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2424	[[ ! -f a.out ]] && compile_error=true
2425	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2426	elif [[ $localhost = lcsgih ]]
2427	then
2428	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
2429	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load ifort/11.0.069; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2430	[[ ! -f a.out ]] && compile_error=true
2431	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2432	else
2433	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2434	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2435	fi
2436
2437	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2438	then
2439	printf "\n +++ error occured while compiling or linking"
2440	locat=compile
2441
2442	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2443	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2444	# then
2445	exit
2446	# else
2447	# locat=normal
2448	# fi
2449	else
2450	printf "$striche\n *** compilation finished \n"
2451	fi
2452	fi
2453
2454
2455	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2456	if [[ $local_compile = true ]]
2457	then
2458	cd $HOME
2459	rm -rf $TEMPDIR
2460	locat=local_compile; exit
2461	fi
2462
2463
2464	# BEREITSTELLEN DER INPUT-DATEIEN
2465	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2466	(( i = 0 ))
2467	while (( i < iin ))
2468	do
2469	(( i = i + 1 ))
2470	if (( i == 1 ))
2471	then
2472	printf "\n\n *** providing INPUT-files:\n$striche"
2473	fi
2474
2475
2476	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2477	if [[ "${transin[$i]}" = unavailable ]]
2478	then
2479	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2480	then
2481	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2482	printf "\n is not available!"
2483	else
2484	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2485	printf "\n is not available!"
2486	fi
2487	continue
2488	fi
2489
2490	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2491	files_for_pes=false; datentyp=file
2492	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2493	then
2494	files_for_pes=true; datentyp=directory
2495	actionin[$i]=""
2496	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2497	then
2498	actionin[$i]=""
2499	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2500	then
2501	files_for_pes=true; datentyp=directory
2502	actionin[$i]="ar"
2503	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2504	then
2505	actionin[$i]="ar"
2506	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2507	then
2508	files_for_pes=true; datentyp=directory
2509	actionin[$i]="fl"
2510	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2511	then
2512	actionin[$i]="fl"
2513	fi
2514
2515	if [[ $files_for_pes = true ]]
2516	then
2517	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2518	else
2519	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2520	fi
2521
2522	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2523	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2524	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2525	# SERVER ZU HOLEN
2526	if [[ "${actionin[$i]}" = fl ]]
2527	then
2528	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2529	if [[ $files_for_pes = false ]]
2530	then
2531	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2532	then
2533	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2534	got_tmp[$i]=true
2535	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2536	then
2537	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2538	printf "\n *** trying to use backup copy in \"$WORK\" "
2539	cp $WORK/${frelin[$i]} ${localin[$i]}
2540	else
2541	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2542	printf "\n or \"$tmp_data_catalog\" does not exist!"
2543	printf "\n *** trying to get copy from archive"
2544	actionin[$i]=ar
2545	fi
2546	else
2547	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2548	then
2549	mkdir ${localin[$i]}
2550	cd $tmp_data_catalog/${frelin[$i]}
2551	for file in $(ls *)
2552	do
2553	ln $file $TEMPDIR/${localin[$i]}
2554	done
2555	cd $TEMPDIR
2556	got_tmp[$i]=true
2557	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2558	then
2559	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2560	printf "\n *** trying to use backup copy in \"$WORK\" "
2561	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2562	else
2563	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2564	printf "\n or \"$tmp_data_catalog\" does not exist!"
2565	printf "\n *** trying to get copy from archive"
2566	actionin[$i]=ar
2567	fi
2568	fi
2569	fi
2570
2571
2572	# DATEI LIEGT AUF ARCHIV-SERVER
2573	if [[ "${actionin[$i]}" = ar ]]
2574	then
2575
2576	if [[ $files_for_pes = false ]]
2577	then
2578	printf "\n file will be restored from archive-system ($archive_system)!"
2579	else
2580	printf "\n directory will be restored from archive-system ($archive_system)!"
2581	fi
2582
2583	file_restored=false
2584
2585	if [[ $archive_system = asterix ]]
2586	then
2587	do_stagein=true
2588	(( stagein_anz = 0 ))
2589	while [[ $do_stagein = true ]]
2590	do
2591	if [[ $files_for_pes = false ]]
2592	then
2593	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2594	else
2595	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2596	fi
2597	cat STAGEIN_OUTPUT
2598	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2599	then
2600	file_restored=true
2601	do_stagein=false
2602	else
2603	(( stagein_anz = stagein_anz + 1 ))
2604	if (( stagein_anz == 10 ))
2605	then
2606	printf "\n +++ stagein stoped after 10 tries"
2607	locat=stage
2608	exit
2609	fi
2610	printf "\n +++ restoring from archive failed, trying again:"
2611	sleep 900
2612	fi
2613	done
2614	elif [[ $archive_system = DMF ]]
2615	then
2616	if [[ $files_for_pes = false ]]
2617	then
2618	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2619	locat=DMF
2620	exit
2621	else
2622	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2623	cp -r $ARCHIVE/${frelin[$i]} $PWD
2624	file_restored=true
2625	fi
2626	elif [[ $archive_system = tivoli ]]
2627	then
2628	if [[ $files_for_pes = false ]]
2629	then
2630	if [[ $localhost = ibmh ]]
2631	then
2632	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2633	else
2634	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2635	fi
2636	else
2637	(( inode = 0 ))
2638	while (( inode < nodes ))
2639	do
2640	if [[ $localhost = ibmh ]]
2641	then
2642	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2643	else
2644	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2645	fi
2646	(( inode = inode + 1 ))
2647	done
2648	fi
2649	file_restored=true
2650	elif [[ $archive_system = ut ]]
2651	then
2652	if [[ $files_for_pes = false ]]
2653	then
2654	cp $UT/${frelin[$i]} .
2655	else
2656	(( inode = 0 ))
2657	while (( inode < nodes ))
2658	do
2659	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2660	(( inode = inode + 1 ))
2661	done
2662	fi
2663	file_restored=true
2664	else
2665	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2666	locat=rearchive
2667	exit
2668	fi
2669
2670	if [[ $file_restored = true ]]
2671	then
2672
2673	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2674	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2675	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2676	if [[ $files_for_pes = false ]]
2677	then
2678	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2679	else
2680	mkdir $tmp_data_catalog/${frelin[$i]}
2681	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2682	fi
2683	got_tmp[$i]=true
2684
2685	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2686	mv ${frelin[$i]} ${localin[$i]}
2687
2688	fi
2689	fi
2690
2691
2692	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2693	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2694	then
2695
2696	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2697	then
2698
2699	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2700	printf "\n file will be provided for $numprocs processors"
2701	mkdir ${localin[$i]}
2702	ival=$numprocs
2703	(( ii = 0 ))
2704	while (( ii <= ival-1 ))
2705	do
2706	if (( ii < 10 ))
2707	then
2708	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2709	elif (( ii < 100 ))
2710	then
2711	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2712	elif (( ii < 1000 ))
2713	then
2714	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2715	else
2716	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2717	fi
2718	(( ii = ii + 1 ))
2719	done
2720
2721	else
2722
2723	if [[ $files_for_pes = true ]]
2724	then
2725
2726	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2727	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2728	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2729	# PER MOVE UMBENANNT WERDEN
2730	printf "\n providing $numprocs files for the respective processors"
2731	mkdir ${localin[$i]}
2732	if [[ $link_local_input = true ]]
2733	then
2734	printf " using ln -f\n"
2735	cd ${absnamein[$i]}
2736	for file in $(ls *)
2737	do
2738	ln -f $file ${localin[$i]}
2739	done
2740	cd $TEMPDIR
2741	fi
2742	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2743	if [[ ! -f "${localin[$i]}/_0000" ]]
2744	then
2745	if [[ $link_local_input = true ]]
2746	then
2747	printf " ln failed for .../_0000, using cp...\n"
2748	fi
2749	cp -r ${absnamein[$i]}/* ${localin[$i]}
2750	fi
2751
2752	else
2753	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2754	if [[ $link_local_input = true ]]
2755	then
2756	printf " using ln -f\n"
2757	ln -f ${absnamein[$i]} ${localin[$i]}
2758	fi
2759	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2760	if [[ ! -f "${localin[$i]}" ]]
2761	then
2762	if [[ $link_local_input = true ]]
2763	then
2764	printf " ln failed, using cp...\n"
2765	fi
2766	cp ${absnamein[$i]} ${localin[$i]}
2767	fi
2768	fi
2769	fi
2770	fi
2771
2772	done
2773	if (( i != 0 ))
2774	then
2775	printf "\n$striche\n *** all INPUT-files provided \n"
2776	fi
2777
2778
2779	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2780	(( i = 0 ))
2781	while (( i < iic ))
2782	do
2783	(( i = i + 1 ))
2784	if (( i == 1 ))
2785	then
2786	printf "\n\n *** execution of INPUT-commands:\n$striche"
2787	fi
2788	printf "\n >>> ${in_command[$i]}"
2789	eval ${in_command[$i]}
2790	if (( i == iic ))
2791	then
2792	printf "\n$striche\n"
2793	fi
2794	done
2795
2796
2797	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2798	cpurest=${cpumax}.
2799
2800
2801	# START DVR STREAMING SERVER
2802	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
2803	then
2804	if [[ "$dvr_server" != "" ]]
2805	then
2806
2807	printf "\n\n *** preparing the dvr streaming server configuration file"
2808
2809	# Check, if a dvr server is already running
2810	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
2811	if [[ "$running_dvrserver_id" != "" ]]
2812	then
2813
2814	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
2815	printf "\n This server is used instead starting a new one!"
2816	printf "\n If required, script \"process_dvr_output\" has to be run manually."
2817
2818	else
2819
2820	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
2821	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
2822	then
2823	cp ${PALM_BIN}/.dvrserver.config .
2824
2825	# Entering the BASEDIR, UID and GID into this file
2826	user_id=`id -u`
2827	group_id=`id -g`
2828	# & is needed as seperator, because TEMPDIR contains /
2829	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
2830	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
2831	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
2832	mv .dvrserver.3 .dvrserver.config
2833	rm .dvrserver.1 .dvrserver.2
2834
2835	# Start dvr server in background, get his id and print on terminal
2836	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
2837	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
2838	printf "\n *** streaming server with id=$dvrserver_id is started in background"
2839	local_dvrserver_running=.TRUE.
2840	else
2841	printf "\n +++ missing file \".dvrserver.config\" in directory:"
2842	printf "\n \"$PALM_BIN\" "
2843	locat=dvr
2844	exit
2845	fi
2846
2847	fi
2848
2849	else
2850	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
2851	fi
2852	fi
2853
2854
2855	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2856	# LESEN VON PALM)
2857	cat > ENVPAR << %%END%%
2858	&envpar run_identifier = '$fname', host = '$localhost',
2859	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2860	maximum_cpu_time_allowed = ${cpumax}.,
2861	revision = '$global_revision',
2862	local_dvrserver_running = $local_dvrserver_running /
2863
2864	%%END%%
2865
2866
2867	# PROGRAMMSTART
2868	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2869	PATH=$PATH:$TEMPDIR
2870
2871	# MPI debug option (argument checking, slows down execution due to increased latency)
2872	if [[ "$mpi_debug" = true ]]
2873	then
2874	export MPI_CHECK_ARGS=1
2875	printf "\n +++ MPI_CHECK_ARGS=$MPI_CHECK_ARGS"
2876	fi
2877
2878	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2879	then
2880	if [[ "$ENVIRONMENT" = BATCH ]]
2881	then
2882	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2883	then
2884	printf "\n +++ debug is allowed in interactive mode only"
2885	locat=debug
2886	exit
2887	fi
2888	fi
2889	if [[ $localhost = decalpha ]]
2890	then
2891	dxladebug a.out
2892	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2893	then
2894
2895	# SETUP THE IBM MPI ENVIRONMENT
2896	export MP_SHARED_MEMORY=yes
2897	export AIXTHREADS_SCOPE=S
2898	export OMP_NUM_THREADS=$threads_per_task
2899	export AUTHSTATE=files
2900	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2901
2902	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2903	export MP_ADAPTER_USE=shared
2904	export MP_CPU_USE=multiple
2905	export MP_TIMEOUT=1200
2906
2907	unset MP_TASK_AFFINITY
2908
2909	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2910	#(( ii = 1 ))
2911	#while (( ii <= $numprocs ))
2912	#do
2913	# echo $localhost_realname >> hostfile
2914	# (( ii = ii + 1 ))
2915	#done
2916	#export MP_HOSTFILE=hostfile
2917
2918	if [[ "$LOADLBATCH" = yes ]]
2919	then
2920	totalview poe a.out $ROPTS
2921	else
2922	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2923	export TVDSVRLAUNCHCMD=ssh
2924	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2925	fi
2926	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2927	then
2928	# CURRENTLY NO DEBUGGER ON LCSGI
2929	if [[ $run_coupled_model = true ]]
2930	then
2931	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2932	locat=debug
2933	exit
2934	else
2935	echo "no_coupling" > runfile_atmos
2936	fi
2937	(( ii = $numprocs / $threads_per_task ))
2938	export OMP_NUM_THREADS=$threads_per_task
2939	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2940	if [[ $threads_per_task != 1 ]]
2941	then
2942	printf "\n threads per task: $threads_per_task"
2943	fi
2944	printf "\n\n"
2945	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
2946	then
2947	# export MPI_LAUNCH_TIMEOUT=360
2948	if [[ "$totalview" = true ]]
2949	then
2950	printf "\n running totalview debugger"
2951	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
2952	else
2953	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
2954	fi
2955	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
2956	then
2957	# ulimit -s 300000 # A too large stack size causes problems
2958	# export MV2_NUM_PORTS=2
2959	# export MV2_CPU_MAPPING=0:1:2:3
2960	if [[ "$totalview" = true ]]
2961	then
2962	printf "\n running totalview debugger"
2963	mpiexec -tv ./a.out $ROPTS < runfile_atmos
2964	else
2965	mpiexec ./a.out $ROPTS < runfile_atmos
2966	fi
2967	fi
2968	else
2969	printf "\n +++ no debug available on \"$localhost\" "
2970	printf "\n or not implemented in mrun so far"
2971	locat=debug
2972	exit
2973	fi
2974	else
2975	if [[ -n $numprocs ]]
2976	then
2977	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2978	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2979	then
2980	# SETUP THE IBM MPI ENVIRONMENT
2981	if [[ $host != ibmh ]]
2982	then
2983	export MP_SHARED_MEMORY=yes
2984	export AIXTHREAD_SCOPE=S
2985	export OMP_NUM_THREADS=$threads_per_task
2986	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2987	export AUTHSTATE=files
2988	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2989	# export MP_PRINTENV=yes
2990
2991	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2992	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2993	export MP_WAIT_MODE=poll
2994	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2995	fi
2996	if [[ "$LOADLBATCH" = yes ]]
2997	then
2998	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2999	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
3000	then
3001	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
3002	else
3003	if [[ $run_coupled_model = false ]]
3004	then
3005	if [[ "$ocean_file_appendix" = true ]]
3006	then
3007	echo "precursor_ocean" > runfile_atmos
3008	else
3009	echo "precursor_atmos" > runfile_atmos
3010	fi
3011	else
3012	(( iia = $numprocs_atmos / $threads_per_task ))
3013	(( iio = $numprocs_ocean / $threads_per_task ))
3014	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3015	printf "\n using $coupled_mode coupling"
3016	printf "\n\n"
3017	echo "coupled_run $iia $iio" > runfile_atmos
3018	fi
3019	poe ./a.out $ROPTS < runfile_atmos
3020	fi
3021	else
3022	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
3023	then
3024	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
3025	elif [[ $localhost = ibmy ]]
3026	then
3027	if [[ -f $hostfile ]]
3028	then
3029	cp $hostfile hostfile
3030	else
3031	(( ii = 1 ))
3032	while (( ii <= $numprocs ))
3033	do
3034	echo $localhost_realname >> hostfile
3035	(( ii = ii + 1 ))
3036	done
3037	fi
3038	export MP_HOSTFILE=hostfile
3039	if [[ $run_coupled_model = false ]]
3040	then
3041	if [[ "$ocean_file_appendix" = true ]]
3042	then
3043	echo "precursor_ocean" > runfile_atmos
3044	else
3045	echo "precursor_atmos" > runfile_atmos
3046	fi
3047	else
3048	(( iia = $numprocs_atmos / $threads_per_task ))
3049	(( iio = $numprocs_ocean / $threads_per_task ))
3050	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3051	printf "\n using $coupled_mode coupling"
3052	printf "\n\n"
3053	echo "coupled_run $iia $iio" > runfile_atmos
3054	fi
3055	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
3056
3057	else
3058	if [[ "$host_file" = "" ]]
3059	then
3060	printf "\n +++ no hostfile given in configuration file"
3061	locat=config_file
3062	exit
3063	else
3064	eval host_file=$host_file
3065	fi
3066	export MP_HOSTFILE=$host_file
3067	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
3068	fi
3069	fi
3070	elif [[ $host = nech \|\| $host = necriam ]]
3071	then
3072	(( ii = nodes ))
3073	if [[ $ii = 1 ]]
3074	then
3075	export F_ERRCNT=0 # acceptable number of errors before program is stopped
3076	export MPIPROGINF=YES
3077	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
3078	echo "*** execution on single node with mpirun"
3079	mpirun -np $numprocs ./a.out $ROPTS
3080	else
3081	(( i = 0 ))
3082	while (( i < ii ))
3083	do
3084	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
3085	(( i = i + 1 ))
3086	done
3087
3088	echo "#!/bin/sh" > mpi_exec_shell
3089	echo " " >> mpi_exec_shell
3090	echo "set -u" >> mpi_exec_shell
3091	echo "F_ERRCNT=0" >> mpi_exec_shell
3092	echo "MPIPROGINV=YES" >> mpi_exec_shell
3093	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
3094	echo "cpurest=$cpurest" >> mpi_exec_shell
3095	echo "fname=$fname" >> mpi_exec_shell
3096	echo "localhost=$localhost" >> mpi_exec_shell
3097	echo "return_addres=$return_addres" >> mpi_exec_shell
3098	echo "return_username=$return_username" >> mpi_exec_shell
3099	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
3100	echo "write_binary=$write_binary" >> mpi_exec_shell
3101	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3102	echo " " >> mpi_exec_shell
3103	echo "export F_ERRCNT" >> mpi_exec_shell
3104	echo "export MPIPROGINV" >> mpi_exec_shell
3105	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
3106	echo "export cpurest" >> mpi_exec_shell
3107	echo "export fname" >> mpi_exec_shell
3108	echo "export localhost" >> mpi_exec_shell
3109	echo "export return_addres" >> mpi_exec_shell
3110	echo "export return_username" >> mpi_exec_shell
3111	echo "export tasks_per_node" >> mpi_exec_shell
3112	echo "export write_binary" >> mpi_exec_shell
3113	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3114	echo " " >> mpi_exec_shell
3115	echo "exec ./a.out" >> mpi_exec_shell
3116
3117	chmod u+x mpi_exec_shell
3118	export MPIPROGINF=YES
3119	mpirun -f multinode_config &
3120	wait
3121
3122	fi
3123	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
3124	then
3125
3126	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
3127	# DOES NOT EXIST
3128	if [[ $host != lcsgih && $host != lcsgib ]]
3129	then
3130	if [[ -f $hostfile ]]
3131	then
3132	cp $hostfile hostfile
3133	else
3134	(( ii = 1 ))
3135	while (( ii <= $numprocs / $threads_per_task ))
3136	do
3137	echo $localhost_realname >> hostfile
3138	(( ii = ii + 1 ))
3139	done
3140	fi
3141	eval zeile=\"`head -n $ii hostfile`\"
3142	printf "\n *** running on: $zeile"
3143	fi
3144
3145	(( ii = $numprocs / $threads_per_task ))
3146	export OMP_NUM_THREADS=$threads_per_task
3147	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
3148	if [[ $threads_per_task != 1 ]]
3149	then
3150	printf "\n threads per task: $threads_per_task"
3151	fi
3152	if [[ $run_coupled_model = false ]]
3153	then
3154	if [[ "$ocean_file_appendix" = true ]]
3155	then
3156	echo "precursor_ocean" > runfile_atmos
3157	else
3158	echo "precursor_atmos" > runfile_atmos
3159	fi
3160	printf "\n\n"
3161	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3162	then
3163	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3164	then
3165	# export MPI_LAUNCH_TIMEOUT=360
3166	# MPI_DSM_DISTRIBUTE not necessary when MPI_DSM_CPULIST is set
3167	# export MPI_DSM_DISTRIBUTE=1
3168	# MPI_DSM_CPULIST: pin MPI processes to cores
3169	export MPI_DSM_CPULIST="0,1,4,5,2,3,6,7:allhosts"
3170	# MPI_IB_RAILS: use both IB rails on ICE2
3171	export MPI_BUFS_PER_HOST=512
3172	export MPI_IB_RAILS=2
3173	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3174	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3175	then
3176	# ulimit -s 300000 # A too large stack size causes problems
3177	# export MV2_NUM_PORTS=2
3178	# export MV2_CPU_MAPPING=0:1:2:3
3179	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
3180	fi
3181	elif [[ $host = lcxt4 ]]
3182	then
3183	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
3184	else
3185	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3186	fi
3187	else
3188
3189	# currently there is no full MPI-2 support on ICE and XT4
3190	(( iia = $numprocs_atmos / $threads_per_task ))
3191	(( iio = $numprocs_ocean / $threads_per_task ))
3192	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3193	printf "\n using $coupled_mode coupling"
3194	printf "\n\n"
3195
3196	if [[ $coupled_mode = "mpi2" ]]
3197	then
3198	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3199	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3200	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3201	then
3202
3203	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3204	then
3205	# export MPI_LAUNCH_TIMEOUT=360
3206	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
3207	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
3208	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3209	then
3210	# ulimit -s 300000 # A too large stack size causes problems
3211	# export MV2_NUM_PORTS=2
3212	# export MV2_CPU_MAPPING=0:1:2:3
3213	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
3214	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
3215	fi
3216
3217	elif [[ $host = lcxt4 ]]
3218	then
3219
3220	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3221	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3222
3223	else
3224	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3225	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3226	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3227	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3228	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3229	fi
3230	wait
3231
3232	else
3233
3234	echo "coupled_run $iia $iio" > runfile_atmos
3235	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3236	then
3237
3238	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3239	then
3240	# export MPI_LAUNCH_TIMEOUT=360
3241	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3242	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3243	then
3244	# ulimit -s 300000 # A too large stack size causes problems
3245	# export MV2_NUM_PORTS=2
3246	# export MV2_CPU_MAPPING=0:1:2:3
3247	mpiexec ./a.out $ROPTS < runfile_atmos
3248	fi
3249
3250	elif [[ $host = lcxt4 ]]
3251	then
3252
3253	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3254
3255	elif [[ $host = lck ]]
3256	then
3257	mpiexec -n $ii ./a.out $ROPTS < runfile_atmos &
3258	fi
3259	wait
3260	fi
3261
3262	# if [[ $scirocco = true ]]
3263	# then
3264	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3265	# else
3266	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3267	# fi
3268	fi
3269	elif [[ $host = decalpha ]]
3270	then
3271	dmpirun -np $numprocs a.out $ROPTS
3272	elif [[ $host = lctit ]]
3273	then
3274	export runfile=runfile.$kennung
3275
3276	echo "cd $PWD" > $runfile
3277	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3278	echo "export cpurest=$cpurest" >> $runfile
3279	echo "export fname=$fname" >> $runfile
3280	echo "export localhost=$localhost" >> $runfile
3281	echo "export return_addres=$return_addres" >> $runfile
3282	echo "export return_username=$return_username" >> $runfile
3283	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3284	echo "export write_binary=$write_binary" >> $runfile
3285	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3286	echo "./a.out" >> $runfile
3287	chmod u+x $runfile
3288
3289	if [[ "$QUEUE" = interactive ]]
3290	then
3291	mpirun -np $numprocs a.out $ROPTS
3292	else
3293	(( mem_tsubame = $memory / 1024.0 ))
3294	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3295	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3296	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3297	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3298	fi
3299
3300	rm $runfile
3301	else
3302	mpprun -n $numprocs a.out $ROPTS
3303	fi
3304	[[ $? != 0 ]] && execution_error=true
3305
3306
3307	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3308	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3309	then
3310	apprentice
3311	fi
3312	else
3313	a.out $ROPTS
3314	fi
3315	fi
3316	if [[ $? != 0 \|\| $execution_error = true ]]
3317	then
3318
3319	# ABBRUCH BEI LAUFZEITFEHLER
3320	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3321	printf "\n +++ runtime error occured"
3322	locat=execution
3323	exit
3324	else
3325	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3326	printf "\n$striche\n *** execution finished \n"
3327
3328	# Stop the dvr streaming server and process the dvr output in order
3329	# to create dvrs- and html-files containing all streams
3330	if [[ "$dvrserver_id" != "" ]]
3331	then
3332	kill $dvrserver_id
3333	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
3334
3335	# If there is a directory, data have been output by the
3336	# streaming server. Otherwise, user has chosen dvrp_output=local
3337	if [[ -d DATA_DVR ]]
3338	then
3339
3340	# Add the current dvr configuration file to the dvr output
3341	# directory
3342	cp .dvrserver.config DATA_DVR
3343
3344	# Process the dvr output (option -s for also generating
3345	# sequence mode data)
3346	process_dvr_output -d DATA_DVR -f $fname -s
3347
3348	else
3349
3350	# Process the local output
3351	process_dvr_output -l -d DATA_DVR -f $fname
3352
3353	fi
3354
3355	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
3356	then
3357
3358	# Process dvr output generated in local mode (dvrp_output=local)
3359	process_dvr_output -l -d DATA_DVR -f $fname
3360
3361	fi
3362	fi
3363
3364
3365
3366	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3367	(( i = 0 ))
3368	while (( i < ioc ))
3369	do
3370	(( i = i + 1 ))
3371	if (( i == 1 ))
3372	then
3373	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3374	fi
3375	printf "\n >>> ${out_command[$i]}"
3376	eval ${out_command[$i]}
3377	if (( i == ioc ))
3378	then
3379	printf "\n$striche\n"
3380	fi
3381	done
3382
3383
3384	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3385	if [[ $do_trace = true ]]
3386	then
3387	printf "\n\n"
3388	ls -al
3389	fi
3390
3391
3392
3393	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3394	(( i = 0 ))
3395	while (( i < iout ))
3396	do
3397	(( i = i + 1 ))
3398	if (( i == 1 ))
3399	then
3400	printf "\n\n *** saving OUTPUT-files:\n$striche"
3401	fi
3402
3403	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3404	files_for_pes=false; filetyp=file
3405	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3406	then
3407	files_for_pes=true; filetyp=directory
3408	actionout[$i]=""
3409	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3410	then
3411	actionout[$i]=""
3412	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3413	then
3414	files_for_pes=true; filetyp=directory
3415	actionout[$i]="ar"
3416	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3417	then
3418	actionout[$i]="ar"
3419	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3420	then
3421	files_for_pes=true; filetyp=directory
3422	actionout[$i]="fl"
3423	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3424	then
3425	actionout[$i]="fl"
3426	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3427	then
3428	files_for_pes=true; filetyp=directory
3429	actionout[$i]="tr"
3430	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3431	then
3432	actionout[$i]="tr"
3433	fi
3434
3435	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3436	then
3437	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3438	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
3439	then
3440	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3441	else
3442
3443
3444	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3445	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3446	# REMOTE-RECHNUNGEN
3447	if [[ "${actionout[$i]}" = tr ]]
3448	then
3449	if [[ $localhost != $fromhost ]]
3450	then
3451	if [[ $files_for_pes = false ]]
3452	then
3453	cps=""
3454	cst=""
3455	else
3456	cps=-c
3457	cst="/"
3458	fi
3459	if [[ $localhost = ibmb \|\| $localhost = nech ]]
3460	then
3461
3462	# TRANSFER IN EIGENSTAENDIGEM JOB
3463	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3464	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3465	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3466	if [[ $files_for_pes = false ]]
3467	then
3468	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3469	else
3470	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3471	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3472	fi
3473
3474	echo "set -x" > transfer_${localout[$i]}
3475	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3476
3477	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3478	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3479	printf "\n or higher cycle\n"
3480	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3481
3482	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3483
3484	if [[ $localhost = nech ]]
3485	then
3486	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3487	else
3488	if [[ "$LOGNAME" = b323013 ]]
3489	then
3490	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3491	else
3492	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3493	fi
3494	fi
3495
3496	else
3497
3498	# TRANSFER INNERHALB DIESES JOBS
3499	transfer_failed=false
3500	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3501	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3502	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3503	[[ $? != 0 ]] && transfer_failed=true
3504
3505	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3506	# LOKALER MASCHINE ANLEGEN
3507	if [[ $transfer_failed = true ]]
3508	then
3509	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3510	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3511
3512	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3513	# ANLEGEN.
3514	eval local_catalog=${pathout[$i]}
3515	if [[ ! -d $local_catalog ]]
3516	then
3517	printf " *** local directory does not exist. Trying to create:\n"
3518	printf " $local_catalog \n"
3519	mkdir -p $local_catalog
3520	fi
3521	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3522	transfer_problems=true
3523	fi
3524	fi
3525	else
3526
3527	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3528	actionout[$i]=""
3529	fi
3530	fi
3531
3532
3533	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3534	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3535	# REMOTE-RECHNUNGEN
3536	if [[ "${actionout[$i]}" = tra ]]
3537	then
3538	if [[ $localhost != $fromhost ]]
3539	then
3540	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3541	then
3542
3543	# TRANSFER IN EIGENSTAENDIGEM JOB
3544	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3545	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3546	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3547	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3548
3549	echo "set -x" > transfer_${localout[$i]}
3550	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3551
3552	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3553	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3554	printf "\n or higher cycle\n"
3555	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3556
3557	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3558
3559	if [[ $localhost = nech ]]
3560	then
3561	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3562	else
3563	if [[ $LOGNAME = b323013 ]]
3564	then
3565	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3566	else
3567	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3568	fi
3569	fi
3570
3571	else
3572
3573	# TRANSFER INNERHALB DIESES JOBS
3574	transfer_failed=false
3575	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3576	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3577	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3578	[[ $? != 0 ]] && transfer_failed=true
3579
3580	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3581	# LOKALER MASCHINE ANLEGEN
3582	if [[ $transfer_failed = true ]]
3583	then
3584	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3585	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3586
3587	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3588	# ANLEGEN
3589	eval local_catalog=${pathout[$i]}
3590	if [[ ! -d $local_catalog ]]
3591	then
3592	printf " *** local directory does not exist. Trying to create:\n"
3593	printf " $local_catalog \n"
3594	mkdir -p $local_catalog
3595	fi
3596
3597	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3598	transfer_problems=true
3599	fi
3600	fi
3601	else
3602
3603	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3604	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3605	actionout[$i]=a
3606	fi
3607	fi
3608
3609
3610	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3611	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3612	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3613	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3614	if [[ "${actionout[$i]}" = fl ]]
3615	then
3616	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3617	chmod g+rx $tmp_data_catalog
3618	if [[ $files_for_pes = false ]]
3619	then
3620	printf "\n >>> OUTPUT: ${localout[$i]} to"
3621	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3622	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3623	else
3624	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3625	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3626	mkdir $tmp_data_catalog/${frelout[$i]}
3627	cd ${localout[$i]}
3628	for file in $(ls *)
3629	do
3630	ln -f $file $tmp_data_catalog/${frelout[$i]}
3631	done
3632	cd $TEMPDIR
3633	fi
3634
3635
3636	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3637	if [[ $store_on_archive_system = true ]]
3638	then
3639
3640	if [[ $archive_system = asterix ]]
3641	then
3642	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3643	if [[ $files_for_pes = false ]]
3644	then
3645	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3646	else
3647	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3648	fi
3649	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3650	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3651	echo "then" >> archive_${frelout[$i]}
3652	echo " do_stageout=false" >> archive_${frelout[$i]}
3653	echo "else" >> archive_${frelout[$i]}
3654	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3655	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3656	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3657	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3658	if [[ $files_for_pes = false ]]
3659	then
3660	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3661	else
3662	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3663	fi
3664	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3665	echo "fi" >> archive_${frelout[$i]}
3666	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3667	elif [[ $archive_system = DMF ]]
3668	then
3669	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3670	if [[ $files_for_pes = false ]]
3671	then
3672	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3673	locat=DMF
3674	exit
3675	else
3676	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3677	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3678	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3679	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3680	fi
3681	elif [[ $archive_system = tivoli ]]
3682	then
3683	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3684	if [[ $files_for_pes = false ]]
3685	then
3686	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3687	echo "set -x" >> archive_${frelout[$i]}
3688	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3689	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3690	else
3691
3692	echo "set -x" >> archive_${frelout[$i]}
3693	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3694	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3695	cd $tmp_data_catalog
3696	all_files=`ls -1 ${frelout[$i]}/*`
3697	cd - > /dev/null
3698	(( inode = 0 ))
3699	(( tp1 = tasks_per_node + 1 ))
3700	while (( inode < nodes ))
3701	do
3702	# echo "*** all_files = \"$all_files\" "
3703	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3704	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3705	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3706	# echo "*** files = \"$files\" "
3707	# echo "*** all_files = \"$all_files\" "
3708	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3709	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3710	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3711	(( inode = inode + 1 ))
3712	done
3713	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3714	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3715	fi
3716	elif [[ $archive_system = ut ]]
3717	then
3718	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3719	if [[ $files_for_pes = false ]]
3720	then
3721	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3722	echo "set -x" >> archive_${frelout[$i]}
3723	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3724	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3725	else
3726
3727	echo "set -x" >> archive_${frelout[$i]}
3728	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3729	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3730	cd $tmp_data_catalog
3731	all_files=`ls -1 ${frelout[$i]}/*`
3732	cd - > /dev/null
3733	(( inode = 0 ))
3734	(( tp1 = tasks_per_node + 1 ))
3735	while (( inode < nodes ))
3736	do
3737	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3738	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3739	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3740	(( inode = inode + 1 ))
3741	done
3742	fi
3743	elif [[ $archive_system = none ]]
3744	then
3745	printf " +++ archiving on $localhost not available!\n"
3746	fi
3747
3748	if [[ $archive_system != none ]]
3749	then
3750	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3751	then
3752	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3753	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3754	elif [[ $localhost = nech ]]
3755	then
3756	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3757	fi
3758	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3759	fi
3760	else
3761	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3762	fi
3763
3764
3765	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3766	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3767	if [[ $files_for_pes = false ]]
3768	then
3769	cat /dev/null > ${pathout[$i]}
3770	else
3771	mkdir -p ${pathout[$i]}
3772	fi
3773
3774	fi
3775
3776
3777	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3778	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3779	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3780	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3781	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3782	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3783	if [[ "${actionout[$i]}" = ar ]]
3784	then
3785	if [[ $files_for_pes = false ]]
3786	then
3787	printf "\n >>> OUTPUT: ${localout[$i]} to"
3788	printf "\n ${pathout[$i]}"
3789	printf "\n File will be copied to archive-system ($archive_system) !\n"
3790	else
3791	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3792	printf "\n ${pathout[$i]}"
3793	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3794	fi
3795	mv ${localout[$i]} ${frelout[$i]}
3796
3797	file_saved=false
3798
3799	if [[ $archive_system = asterix ]]
3800	then
3801	do_stageout=true
3802	(( stageout_anz = 0 ))
3803	while [[ $do_stageout = true ]]
3804	do
3805	if [[ $files_for_pes = false ]]
3806	then
3807	stageout ${frelout[$i]} > STAGE_OUTPUT
3808	else
3809	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3810	fi
3811	cat STAGE_OUTPUT
3812	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3813	then
3814	file_saved=true
3815	do_stageout=false
3816	else
3817	if [[ $files_for_pes = false ]]
3818	then
3819	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3820	else
3821	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3822	fi
3823	(( stageout_anz = stageout_anz + 1 ))
3824	if (( stageout_anz == 10 ))
3825	then
3826	printf "\n +++ stoped after 10 unsuccessful tries!"
3827	archive_save=false
3828	do_stageout=false
3829	else
3830	printf "\n *** new try to store on archive after 15 min:"
3831	sleep 900
3832	fi
3833	fi
3834	done
3835	elif [[ $archive_system = DMF ]]
3836	then
3837	if [[ $files_for_pes = false ]]
3838	then
3839	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3840	locat=DMF
3841	exit
3842	else
3843	rm -rf $ARCHIVE/${frelout[$i]}
3844	cp -r ${frelout[$i]} $ARCHIVE
3845	fi
3846	file_saved=true
3847	elif [[ $archive_system = tivoli ]]
3848	then
3849	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3850	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3851	# GELEGT WERDEN
3852	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3853	chmod g+rx $tmp_data_catalog
3854	if [[ $files_for_pes = false ]]
3855	then
3856	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3857	else
3858	mkdir $tmp_data_catalog/${frelout[$i]}
3859	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3860	fi
3861
3862	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3863	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3864	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3865	if [[ $files_for_pes = false ]]
3866	then
3867	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3868	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3869	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3870	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3871	else
3872	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3873	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3874	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3875	fi
3876
3877	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3878	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3879	file_saved=true
3880
3881	elif [[ $archive_system = ut ]]
3882	then
3883	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3884	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3885	# GELEGT WERDEN
3886	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3887	chmod g+rx $tmp_data_catalog
3888	if [[ $files_for_pes = false ]]
3889	then
3890	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3891	else
3892	mkdir $tmp_data_catalog/${frelout[$i]}
3893	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3894	fi
3895
3896	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3897	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3898	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3899	if [[ $files_for_pes = false ]]
3900	then
3901	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3902	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3903	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3904	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3905	else
3906	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3907	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3908	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3909	fi
3910
3911	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3912	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3913	file_saved=true
3914
3915	else
3916	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3917	archive_save=false
3918	fi
3919	if [[ $file_saved = true ]]
3920	then
3921	if [[ $files_for_pes = false ]]
3922	then
3923	cat /dev/null > ${pathout[$i]}
3924	else
3925	mkdir -p ${pathout[$i]}
3926	fi
3927	fi
3928	fi
3929
3930	# APPEND AUF LOKALER MASCHINE
3931	if [[ "${actionout[$i]}" = "a" ]]
3932	then
3933	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3934	cat ${localout[$i]} >> ${pathout[$i]}
3935	fi
3936
3937	# KOPIEREN AUF LOKALER MASCHINE
3938	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3939	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3940	then
3941
3942	# KOPIEREN AUF EINPROZESSORMASCHINE
3943	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3944	then
3945	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3946	if [[ $link_local_output = true ]]
3947	then
3948	printf " using ln -f\n"
3949	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3950	fi
3951	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3952	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3953	then
3954	if [[ $link_local_output = true ]]
3955	then
3956	printf " ln failed, using cp...\n"
3957	fi
3958	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3959	fi
3960	else
3961	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3962	if [[ $link_local_output = true ]]
3963	then
3964	printf " using ln -f\n"
3965	ln -f ${localout[$i]} ${pathout[$i]}
3966	fi
3967	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3968	if [[ ! -f "${pathout[$i]}" ]]
3969	then
3970	if [[ $link_local_output = true ]]
3971	then
3972	printf " ln failed, using cp...\n"
3973	fi
3974	cp ${localout[$i]} ${pathout[$i]}
3975	fi
3976	fi
3977
3978	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3979	then
3980
3981	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3982	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3983	# WIRD DANN KOPIERT
3984	# PER MOVE UMBENANNT WERDEN
3985	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3986	if [[ $link_local_output = true ]]
3987	then
3988	printf " using ln -f\n"
3989	mkdir ${pathout[$i]}
3990	cd ${localout[$i]}
3991	for file in $(ls *)
3992	do
3993	ln -f $file ${pathout[$i]}
3994	done
3995	cd $TEMPDIR
3996	fi
3997	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3998	if [[ ! -f "${pathout[$i]}/_0000" ]]
3999	then
4000	if [[ $link_local_output = true ]]
4001	then
4002	printf " ln failed for .../_0000, using cp...\n"
4003	fi
4004	cp -r ${localout[$i]} ${pathout[$i]}
4005	fi
4006
4007	fi
4008	fi
4009	done
4010	if (( i != 0 ))
4011	then
4012	if [[ $transfer_problems = true ]]
4013	then
4014	printf "\n$striche\n *** OUTPUT-files saved"
4015	printf "\n +++ WARNING: some data transfers failed! \n"
4016	else
4017	printf "\n$striche\n *** all OUTPUT-files saved \n"
4018	fi
4019	fi
4020
4021
4022	# EVENTUELL FOLGEJOB STARTEN
4023	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
4024	if [[ -f CONTINUE_RUN ]]
4025	then
4026
4027	if [[ $archive_save = true ]]
4028	then
4029
4030	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
4031	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
4032	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
4033	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
4034	# HANDEN
4035	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
4036	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
4037	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
4038	if [[ $(echo $mc \| grep -c "#") != 0 ]]
4039	then
4040	mc=`echo $mc \| sed 's/#/f/g'`
4041	fi
4042
4043
4044	# JOB STARTEN
4045	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
4046	echo " $mc"
4047	printf "\n$striche\n"
4048	if [[ $localhost != $fromhost ]]
4049	then
4050
4051	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
4052	then
4053	echo "*** ssh will be used to initiate restart-runs!"
4054	echo " return_addres=\"$return_addres\" "
4055	echo " return_username=\"$return_username\" "
4056	if [[ $return_addres = 172.20.25.41 ]]
4057	then
4058	# WORKAROUND AUF SCIROCCO AM TIT
4059	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
4060	else
4061	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4062	fi
4063	else
4064	printf "\n +++ no restart mechanism available for host \"$localhost\" "
4065	locat=restart; exit
4066	fi
4067
4068	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
4069	# DER AKTUELLE JOB ENDET
4070	sleep 30
4071
4072	else
4073
4074	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
4075	# RUFEN WERDEN, AUSSER AUF lcfimm
4076	cd $LOCAL_PWD
4077	if [[ $localhost = lcfimm ]]
4078	then
4079	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4080	else
4081	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
4082	fi
4083	cd - > /dev/null
4084	fi
4085	printf "\n$striche\n *** restart-run initiated \n"
4086
4087
4088	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
4089	# GEHOLT WORDEN SIND, LOESCHEN
4090	(( i = 0 ))
4091	while (( i < iin ))
4092	do
4093	(( i = i + 1 ))
4094	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
4095	then
4096	rm -r $tmp_data_catalog/${frelin[$i]}
4097	fi
4098	done
4099
4100	else
4101
4102	printf "\n +++ no restart-run possible, since errors occured"
4103	printf "\n during the archive process"
4104	fi
4105
4106	fi
4107
4108
4109
4110	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
4111	if [[ "$email_notification" != "none" ]]
4112	then
4113
4114	if [[ $localhost != $fromhost ]]
4115	then
4116	if [[ -f CONTINUE_RUN ]]
4117	then
4118	echo "PALM restart run necessary" > email_text
4119	echo "description header of actual run:" >> email_text
4120	cat CONTINUE_RUN >> email_text
4121	echo "mrun-command to restart:" >> email_text
4122	echo "$mc" >> email_text
4123	else
4124	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
4125	fi
4126	mail $email_notification < email_text
4127	printf "\n *** email notification sent to \"$email_notification\" "
4128	fi
4129	fi
4130
4131
4132
4133	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
4134	cd $HOME
4135	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
4136
4137	else
4138
4139
4140	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
4141	# CHENDE AKTIONEN DURCHGEFUEHRT
4142
4143	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
4144	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
4145	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
4146	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
4147	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
4148	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
4149	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
4150	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
4151	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
4152	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
4153	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
4154	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
4155	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
4156	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
4157	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
4158	if [[ $use_openmp = true ]]
4159	then
4160	mrun_com=${mrun_com}" -O"
4161	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
4162	else
4163	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
4164	fi
4165	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
4166	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
4167	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
4168	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
4169	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
4170	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
4171	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
4172	if [[ $do_remote = true ]]
4173	then
4174	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
4175	fi
4176
4177
4178	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
4179	jobfile=jobfile.$RANDOM
4180
4181
4182	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
4183	echo "mkdir $TEMPDIR" >> $jobfile
4184	echo "cd $TEMPDIR" >> $jobfile
4185
4186
4187	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
4188	if [[ $do_trace = true ]]
4189	then
4190	echo "set -x" >> $jobfile
4191	else
4192	echo "set +vx" >> $jobfile
4193	fi
4194
4195
4196	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
4197	# DATEI FUER DEN JOB
4198	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
4199	then
4200
4201	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
4202	# KOPIEREN
4203	if [[ $restart_run != true ]]
4204	then
4205	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
4206	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
4207	fi
4208
4209	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
4210	echo "set -x" >> $jobfile
4211	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
4212	echo "export SOURCES_COMPLETE=true" >> $jobfile
4213
4214	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
4215	# ARBEITSVERZEICHNIS VERSCHIEBEN
4216	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
4217	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
4218	echo "execute_mrun=true" >> $jobfile
4219	echo " " >> $jobfile
4220
4221	else
4222
4223	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
4224	# SOWIE GEGEBENENFALLS DES MAKEFILES
4225	if [[ $do_compile = true ]]
4226	then
4227
4228	source_catalog=SOURCES_FOR_RUN_$fname
4229
4230	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
4231	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
4232	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
4233	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
4234	echo "export SOURCES_COMPLETE=true" >> $jobfile
4235	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
4236
4237	for filename in $source_list
4238	do
4239	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4240	echo "cat > $filename << \"%END%\"" >> $jobfile
4241	cat $source_catalog/$filename >> $jobfile
4242	echo " " >> $jobfile
4243	echo "%END%" >> $jobfile
4244	echo " " >> $jobfile
4245	done
4246
4247	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4248	echo "cat > Makefile << \"%END%\"" >> $jobfile
4249	cat $source_catalog/Makefile >> $jobfile
4250	echo " " >> $jobfile
4251	echo "%END%" >> $jobfile
4252	echo " " >> $jobfile
4253
4254	echo "cd - > /dev/null" >> $jobfile
4255
4256	fi
4257
4258
4259	# ABSPEICHERN DER KONFIGURATIONSDATEI
4260	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4261	echo "cat > $config_file << \"%END%\"" >> $jobfile
4262	cat $config_file >> $jobfile
4263	echo "%END%" >> $jobfile
4264	echo " " >> $jobfile
4265
4266
4267	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4268	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4269	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4270	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4271	echo "%END%" >> $jobfile
4272	if [[ $host = lctit ]]
4273	then
4274	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4275	echo "mv mrun_new $mrun_script_name" >> $jobfile
4276	fi
4277	echo "chmod u+x $mrun_script_name" >> $jobfile
4278	echo "execute_mrun=true" >> $jobfile
4279	echo " " >> $jobfile
4280
4281	fi
4282
4283
4284	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4285	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4286	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4287	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4288	if [[ $do_remote = true ]]
4289	then
4290	(( i = 0 ))
4291	while (( i < iin ))
4292	do
4293	(( i = i + 1 ))
4294	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4295	if [[ "${transin[$i]}" = job ]]
4296	then
4297	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4298	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4299	echo " " >> $jobfile
4300	echo "%END%" >> $jobfile
4301	else
4302	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4303	fi
4304
4305	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4306	echo "if [[ \$? = 1 ]]" >> $jobfile
4307	echo "then" >> $jobfile
4308	echo " echo \" \" " >> $jobfile
4309	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4310	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4311	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4312	echo " execute_mrun=false" >> $jobfile
4313	echo "fi" >> $jobfile
4314	done
4315	fi
4316
4317	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4318	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4319	echo "LOCAL_PWD=$working_directory" >> $jobfile
4320	echo "export LOCAL_PWD" >> $jobfile
4321
4322	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4323	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4324	echo "export LOCAL_MRUN_PATH" >> $jobfile
4325
4326	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4327	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4328	then
4329	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4330	fi
4331
4332	# MRUN AUF ZIELRECHNER AUFRUFEN
4333	echo "set -x" >> $jobfile
4334	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4335
4336	echo 'ls -al; echo `pwd`' >> $jobfile
4337	echo "cd \$HOME" >> $jobfile
4338	echo "rm -rf $TEMPDIR" >> $jobfile
4339
4340
4341
4342
4343	# JOB PER SUBJOB STARTEN
4344	if [[ $silent = false ]]
4345	then
4346	printf "\n "
4347	else
4348	printf "\n\n"
4349	fi
4350
4351	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog -e $email_notification $jobfile
4352	rm -rf $jobfile
4353
4354
4355	fi # ENDE REMOTE-TEIL
4356
4357
4358
4359	# ENDE DER PROZEDUR

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