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source: palm/trunk/SCRIPTS/mrun @ 26

Last change on this file since 26 was 26, checked in by raasch, 17 years ago
mrun is using interpret_config.x for all machines
File size: 147.0 KB

Line
1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 28/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109	# 14/02/07 - Siggi - dvrp support for neck added
110	# 28/02/07 - Siggi - empty lines in configuration file are accepted
111	# mrun_path replaced by PALM_BIN,
112	# all machines are calling interpret_config.x
113
114
115
116
117	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
118
119	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
120	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
121	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
122
123	AddFilenames=""
124	additional_conditions=""
125	add_source_path=""
126	afname=""
127	archive_save=true
128	archive_system=none
129	compiler_name=""
130	cond1=""
131	cond2=""
132	config_file=.mrun.config
133	cpp_opts=""
134	cpumax=0
135	cpurest=0
136	delete_temporary_catalog=true
137	do_batch=false
138	do_compile=true
139	do_remote=false
140	do_stagein=true
141	do_stageout=true
142	do_trace=false
143	email_notification=""
144	exclude=""
145	executable=""
146	execution_error=false
147	filetransfer_protocol=""
148	fname=test
149	fromhost=""
150	host=""
151	host_file=""
152	hp=""
153	ignore_archive_error=false
154	input_list=""
155	interpreted_config_file=""
156	job_on_file=""
157	keep_data_from_previous_run=false
158	localhost_realname=$(hostname)
159	local_compile=false
160	locat=normal
161	mainprog=""
162	makefile=""
163	mc=$0
164	while [[ $(echo $mc \| grep -c "/") != 0 ]]
165	do
166	mc=`echo $mc \| cut -f2- -d"/"`
167	done
168	module_files=""
169	MODULE_OPTIONS=""
170	mrun_script_name=$mc
171	netcdf_support=false
172	node_usage=default
173	numprocs=""
174	OOPT=""
175	openmp=false
176	output_list=""
177	package_list=""
178	punkte="..........................................................."
179	queue=none
180	read_from_config=""
181	restart_run=false
182	# return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
183	return_addres=130.75.105.2
184	if [[ $return_addres = 130.75.105.158 ]]
185	then
186	return_addres=172.20.25.41
187	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
188	fi
189	# if [[ $return_addres = 210.117.65.1 ]]
190	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
191	# then
192	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
193	# fi
194	return_password=""
195	return_username=$LOGNAME
196	remotecall=false
197	remote_username=""
198	run_mode=""
199	scirocco=false
200	store_on_archive_system=true
201	striche=" ----------------------------------------------------------------------------"
202	silent=false
203	source_list=""
204	source_path=SOURCE
205	tasks_per_node=""
206	threads_per_task=1
207	tmpcreate=false
208	tmp_data_catalog=""
209	transfer_problems=false
210	usern=$LOGNAME
211	use_makefile=""
212	working_directory=`pwd`
213	TOPT=""
214	XOPT=""
215	zeit=$( date \| cut -c 12-19 )
216
217	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
218	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
219
220	typeset -R40 calltime
221	typeset -L20 spalte1
222	typeset -L40 spalte2
223	typeset -L60 spalte3
224	typeset -L35 string1=`date`
225	typeset -L12 string2=$usern
226	typeset -L12 string3=$localhost_realname
227	typeset -L12 string4
228	typeset -L12 string5
229	typeset -L20 version="MRUN 1.8"
230
231
232
233	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
234	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
235
236	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
237	# EXPORTIERT WERDEN
238	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
239	export input_list memory numprocs output_list queue run_mode
240
241
242
243	# FEHLERBEHANDLUNG
244	# BEI EXIT:
245	trap 'if [[ $locat != localhost ]]
246	then
247	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
248	# then
249	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
250	#MRUN-calls on $localhost
251	#
252	#date and time user localhost remotehost termination mrun-command
253	#--------------------------------------------------------------------------------------------------------------------
254	#%STATEND%
255	# chmod 666 ${mrun_path}/statistik/mrun_statistik
256	# fi
257	#
258	# # EINTRAG IN DIE STATISTIK-DATEI
259	# string4=$host
260	# string5=$locat
261	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
262	# then
263	# if [[ $do_batch = true ]]
264	# then
265	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
266	# else
267	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
268	# fi
269	# fi
270	continue
271	fi
272
273	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
274	then
275
276	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
277	(( i = 0 ))
278	while (( i < iec ))
279	do
280	(( i = i + 1 ))
281	printf "\n *** Execution of ERROR-command:\n"
282	printf " >>> ${err_command[$i]}\n"
283	eval ${err_command[$i]}
284	done
285	if [[ -n $interpreted_config_file ]] then
286	rm -rf $interpreted_config_file
287	fi
288	if [[ $tmpcreate = true ]]
289	then
290	printf "\n *** Contents of \"$TEMPDIR\":\n"
291	ls -al; cd
292	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
293	fi
294	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
295	then
296	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
297	fi
298	printf "\n\n+++ MRUN killed \n\n"
299	elif [[ $locat != control_c ]]
300	then
301	printf "\n\n --> all actions finished\n\n"
302	printf " Bye, bye $usern !!\n\n"
303	fi' exit
304
305
306	# BEI TERMINAL-BREAK:
307	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
308	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
309	then
310	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
311	fi
312	printf "\n+++ MRUN killed by \"^C\" \n\n"
313	locat=control_c
314	exit
315	' 2
316
317
318	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
319	# BEEN SET
320	if [[ "$PALM_BIN" = "" ]]
321	then
322	printf "\n +++ environment variable PALM_BIN has not been set"
323	printf "\n please set it to the directory where the PALM scripts are located"
324	locat=palm_bin; exit
325	fi
326
327
328	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
329	case $localhost_realname in
330	(atmos) localhost=lcide;;
331	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
332	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
333	(cs*) localhost=nech; archive_system=ut;;
334	(gate\|n-sx) PATH=$MRUN_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
335	(ground.yonsei.ac.kr) localhost=decalpha;;
336	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
337	(gfdl5) localhost=ibmy;;
338	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
339	(nobel*) localhost=ibms;;
340	(sun1\|sun2) localhost=unics;;
341	(tgg*) localhost=lctit;;
342	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
343	locat=localhost; exit;;
344	esac
345
346	[[ $localhost_realname = scirocco ]] && scirocco=true
347
348
349
350	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
351	# FUER FOLGEJOBS BENOETIGT WIRD
352	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
353	do
354	case $option in
355	(a) afname=$OPTARG;;
356	(A) store_on_archive_system=false; mc="$mc -A";;
357	(b) do_batch=true; mc="$mc -b";;
358	(B) delete_temporary_catalog=false; mc="$mc -B";;
359	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
360	(C) restart_run=true; mc="$mc -C";;
361	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
362	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
363	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
364	(F) job_on_file="-D"; mc="$mc -F";;
365	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
366	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
367	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
368	(I) ignore_archive_error=true; mc="$mc -I";;
369	(k) keep_data_from_previous_run=true; mc="$mc -k";;
370	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
371	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
372	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
373	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
374	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
375	(O) use_openmp=true; mc="$mc -O";;
376	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
377	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
378	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
379	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
380	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
381	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
382	(S) read_from_config=false; mc="$mc -S";;
383	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
384	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
385	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
386	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
387	(v) silent=true; mc="$mc -v";;
388	(x) do_trace=true;set -x; mc="$mc -x";;
389	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
390	(\?) printf "\n +++ unknown option $OPTARG \n"
391	printf "\n --> type \"$0 ?\" for available options \n"
392	locat=parameter;exit;;
393	esac
394	done
395
396
397	# EVTL. POSITIONSPARAMETER EINLESEN
398	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
399	shift OPTIND-1
400
401
402	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
403	if [[ "$1" = "?" ]]
404	then
405	(printf "\n *** mrun can be called as follows:\n"
406	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
407	printf "\n Description of available options:\n"
408	printf "\n Option Description Default-Value"
409	printf "\n -a base name of input files equiv. -d"
410	printf "\n -A no archiving when using file-attribute fl"
411	printf "\n -b batch-job on local machine ---"
412	printf "\n -B do not delete temporary directory at end ---"
413	printf "\n -c configuration file .mrun.config"
414	printf "\n -d base name of files attached to program test"
415	printf "\n -D preprocessor(cpp)-directives \"\" "
416	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
417	printf "\n -F create remote job file only ---"
418	printf "\n -h execution host $localhost_realname"
419	printf "\n -i INPUT control list \"\" "
420	printf "\n -I archiving errors of previous batch-jobs"
421	printf "\n will be ignored"
422	printf "\n -k keep data from previous run"
423	printf "\n -K additional conditions for controling"
424	printf "\n usage of conditional code and"
425	printf "\n env-variables in configuration file \"\" "
426	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
427	printf "\n -M Makefile name Makefile"
428	printf "\n -n node usage (shared/not_shared) depending on -h"
429	printf "\n -o OUTPUT control list \"\" "
430	printf "\n -O use OpenMP ---"
431	printf "\n -p software package list \"\" "
432	printf "\n -q queue \"$queue\" "
433	printf "\n -r run control list (combines -i -o) \"\" "
434	printf "\n -s filenames of routines to be compiled \"\" "
435	printf "\n must end with .f, .f90, .F, or .c !"
436	printf "\n use \"..\" for more than one file and wildcards"
437	printf "\n -s TEST compiles all files with w-permit"
438	printf "\n -S config file interpreted by shellscript ---"
439	printf "\n -t allowed cpu-time in seconds (batch) 0"
440	printf "\n -T tasks per node depending on -h"
441	printf "\n -u username on remote machine \"\" "
442	printf "\n -v no prompt for confirmation ---"
443	printf "\n -x tracing of mrun for debug purposes ---"
444	printf "\n -X # of processors (on parallel machines) 1"
445	printf "\n "
446	printf "\n Possible values of positional parameter <modus>:"
447	printf "\n \"?\" - this outline \n\n") \| more
448	exit
449	elif [[ "$1" != "" ]]
450	then
451	printf "\n +++ positional parameter $1 unknown \n"
452	locat=parameter; exit
453	fi
454
455
456
457	# KURZE STARTMELDUNG
458	printf "\n*** $version "
459	printf "\n will be executed. Please wait ..."
460
461
462	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
463	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
464	[[ "$afname" = "" ]] && afname=$fname
465
466
467	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
468	if [[ "$run_mode" != "" ]]
469	then
470	input_list="$input_list $run_mode"
471	output_list="$output_list $run_mode"
472	fi
473
474
475	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
476	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
477	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
478	# STARTET)
479	if [[ "$fromhost" = "" ]]
480	then
481	fromhost=$localhost
482	fi
483
484
485	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
486	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
487	then
488	source_list=TEST
489	local_compile=true
490	host=$localhost
491	fi
492
493
494	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
495	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
496	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
497	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
498	if [[ -n $host && "$host" != $localhost ]]
499	then
500	do_batch=true
501	do_remote=true
502	case $host in
503	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
504	(*) printf "\n"
505	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
506	printf "\n or NQS not available on execution host!"
507	locat=nqs; (( iec = 0 )); exit;;
508	esac
509	else
510	host=$localhost
511	fi
512
513
514	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
515	if [[ -n $additional_conditions ]]
516	then
517	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
518	# cond1=`echo $additional_conditions \| cut -d" " -f1`
519	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
520	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
521	if [[ -n $dummy ]]
522	then
523	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
524	locat=options; exit
525	fi
526	fi
527
528
529	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
530	# ARCHIVIERUNG FEHLGESCHLAGEN IST
531	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
532	then
533	if [[ $ignore_archive_error = false ]]
534	then
535	printf "\n +++ data archiving of previous run failed"
536	printf "\n see directory \~/job_queue on remote machine"
537	locat=archive; exit
538	else
539	printf "\n +++ warning: data archiving in a previous run failed"
540	printf "\n MRUN continues, trying to get backup copy"
541	fi
542	fi
543
544
545	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
546	if [[ ! -f $config_file ]]
547	then
548	printf "\n\n +++ configuration file: "
549	printf "\n $config_file"
550	printf "\n does not exist"
551	locat=connect; exit
552	fi
553
554
555
556	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
557	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
558	if [[ "$read_from_config" = false ]]
559	then
560
561	[[ $silent = false ]] && printf "\n Reading the configuration file... "
562	while read zeile
563	do
564	[[ $silent = false ]] && printf "."
565
566
567	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
568	# ERSETZEN
569	eval zeile=\"$zeile\"
570
571
572	# INTERPRETATION DER ZEILE
573	if [[ "$(echo $zeile)" = "" ]]
574	then
575	# LEERZEILE, KEINE AKTION
576	continue
577
578	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
579	then
580
581	# ZEILE IST KOMMENTARZEILE
582	true
583
584	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
585	then
586
587	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
588	zeile=$(echo $zeile \| cut -c2-)
589	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
590	# var=`echo $zeile \| cut -d" " -f1`
591	# value=`echo $zeile \| cut -d" " -s -f2`
592	# for_host=`echo $zeile \| cut -d" " -s -f3`
593	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
594	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
595
596	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
597	then
598
599	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
600	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
601	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
602
603
604	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
605	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
606	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
607	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
608	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
609	# KONFIGURATIONSDATEI
610	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
611	then
612	eval $var=\$value
613
614	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
615	if [[ $do_trace = true ]]
616	then
617	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
618	fi
619	fi
620
621	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
622	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
623	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
624	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
625	if [[ $var = host ]]
626	then
627	if [[ -n $host && "$host" != $localhost ]]
628	then
629	do_batch=true
630	do_remote=true
631	case $host in
632	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
633	(*) printf "\n +++ no queueing system available on execution host \"$host\""
634	locat=nqs; exit;;
635	esac
636	else
637	host=$localhost
638	fi
639	fi
640
641	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
642	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
643	# DEN PROGRAMMEN BENOETIGT WERDEN
644	export $var
645	fi
646
647
648
649
650	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
651	then
652
653	# ZEILE DEFINIERT ERROR-KOMMANDO
654	(( iec = iec + 1 ))
655	zeile=$(echo $zeile \| cut -c4-)
656	err_command[$iec]="$zeile"
657
658	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
659	then
660
661	# ZEILE DEFINIERT INPUT-KOMMANDO
662	(( iic = iic + 1 ))
663	zeile=$(echo $zeile \| cut -c4-)
664	in_command[$iic]="$zeile"
665
666	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
667	then
668
669	# ZEILE DEFINIERT OUTPUT-KOMMANDO
670	(( ioc = ioc + 1 ))
671	zeile=$(echo $zeile \| cut -c4-)
672	out_command[$ioc]="$zeile"
673
674	else
675
676	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
677	# s2a: in/out - Feld
678	# s2b: loc - Feld (optional)
679	# s2c: tr/ar - Feld (optional)
680	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
681	# s1=`echo $zeile \| cut -d" " -f1`
682	# s2=`echo $zeile \| cut -d" " -s -f2`
683	s2a=$(echo $s2 \| cut -d":" -f1)
684	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
685	then
686	s2b=""
687	s2c=""
688	else
689	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
690	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
691	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
692	fi
693	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
694	# s3=`echo $zeile \| cut -d" " -f3`
695	# s4=`echo $zeile \| cut -d" " -s -f4`
696	# s5=`echo $zeile \| cut -d" " -s -f5`
697	# s6=`echo $zeile \| cut -d" " -s -f6`
698
699
700	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
701	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
702	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
703	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
704	# HANDEN SEIN MUSS (D.H. s2b = loc)
705	IFSALT="$IFS"; IFS="$IFS:"
706	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
707	then
708	found=false
709	for actual in $input_list
710	do
711	for formal in $s3
712	do
713	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
714	done
715	done
716	if [[ $found = true ]]
717	then
718	(( iin = iin + 1 ))
719	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
720	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
721	extin[$iin]=$s6
722	fi
723	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
724	then
725	found=false
726	for actual in $output_list
727	do
728	for formal in $s3
729	do
730	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
731	done
732	done
733	if [[ $found = true ]]
734	then
735	(( iout = iout + 1 ))
736	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
737	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
738	fi
739	elif [[ "$s2a" != in && "$s2a" != out ]]
740	then
741	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
742	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
743	locat=connect; exit
744	fi
745	IFS="$IFSALT"
746	fi
747	done < $config_file
748
749	else
750
751
752	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
753	[[ $silent = false ]] && printf "..."
754	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
755	export interpreted_config_file=.icf.$RANDOM
756
757	# case $localhost_realname in
758	# (caurus\|twister) interpret_config.hp;;
759	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
760	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
761	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
762	# (*) interpret_config.x;;
763	# esac
764
765	interpret_config.x
766
767	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
768	chmod u+x $interpreted_config_file
769	export PATH=$PATH:.
770	. $interpreted_config_file
771	rm $interpreted_config_file
772
773	fi
774
775
776	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
777	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
778	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
779	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
780	if [[ "$SOURCES_COMPLETE" = "" ]]
781	then
782
783	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
784	# VEREINBART WURDE
785	source_path=""
786	line=""
787	grep "%source_path" $config_file > tmp_mrun
788	while read line
789	do
790	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
791	then
792	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
793	then
794	global_source_path=`echo $line \| cut -d" " -f2`
795	fi
796	fi
797	done < tmp_mrun
798
799	line=""
800	found=false
801	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
802	while read line
803	do
804	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
805	then
806	if [[ $found = true ]]
807	then
808	printf "\n\n +++ more than one source path found in configuration file"
809	printf "\n for local host \"$localhost\" "
810	locat=source_path; exit
811	fi
812	source_path=`echo $line \| cut -d" " -f2`
813	found=true
814	fi
815	done < tmp_mrun
816	rm tmp_mrun
817
818	if [[ "$source_path" = "" ]]
819	then
820	if [[ "$global_source_path" != "" ]]
821	then
822	source_path=$global_source_path
823	else
824	printf "\n\n +++ no source path found in configuration file"
825	printf "\n for local host \"$localhost\" "
826	locat=source_path; exit
827	fi
828	fi
829	eval source_path=$source_path
830
831	if [[ ! -d $source_path ]]
832	then
833	printf "\n\n +++ source path \"$source_path\" on local host"
834	printf "\n \"$localhost\" does not exist"
835	locat=source_path; exit
836	fi
837
838	fi
839
840
841
842	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
843	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
844	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
845	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
846	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
847	if [[ -n $host && "$host" != $localhost ]]
848	then
849	do_batch=true
850	do_remote=true
851	case $host in
852	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
853	(*) printf "\n"
854	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
855	printf "\n or no queueing system available on execution host!"
856	locat=nqs; (( iec = 0 )); exit;;
857	esac
858	else
859	host=$localhost
860	fi
861
862
863	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
864	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
865	then
866
867	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
868	if [[ ! -n $numprocs ]]
869	then
870	printf "\n"
871	printf "\n +++ option \"-K parallel\" requires additional specification"
872	printf "\n of the number of processors to be used by"
873	printf "\n mrun-option \"-X\" or by environment-variable"
874	printf "\n \"numprocs\" in the configuration file"
875	locat=numprocs; (( iec = 0 )); exit
876	fi
877
878	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
879	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
880	# GESAMTPROZESSORANZAHL IST
881	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
882	then
883	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
884	(( ival = $tasks_per_node ))
885	(( pes = numprocs ))
886	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
887	# then
888	# (( pes = pes - 1 ))
889	# fi
890	(( ii = pes / ival ))
891	if (( pes - ii * ival > 0 ))
892	then
893	printf "\n"
894	printf "\n +++ tasks per node (option \"-T\") must be an integral"
895	printf "\n divisor of the total number of processors (option \"-X\")"
896	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
897	locat=tasks_per_node; (( iec = 0 )); exit
898	fi
899	fi
900
901	# IBMY HAT NUR EINEN KNOTEN
902	if [[ $host = ibmy ]]
903	then
904	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
905	then
906	printf "\n"
907	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
908	printf "\n total number of processors (option \"-X\")"
909	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
910	locat=tasks_per_node; (( iec = 0 )); exit
911	fi
912	fi
913
914	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
915	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
916	if [[ $use_openmp = true ]]
917	then
918	threads_per_task=$tasks_per_node
919	tasks_per_node=1
920	fi
921	OOPT="-O $threads_per_task"
922	TOPT="-T $tasks_per_node"
923
924	# GESAMTZAHL DER KNOTEN BESTIMMEN
925	if [[ "$tasks_per_node" != "" ]]
926	then
927	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
928	fi
929
930	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
931	# SETZEN
932	if [[ $node_usage = default ]]
933	then
934	if [[ $host = ibms ]]
935	then
936	node_usage=shared
937	else
938	node_usage=not_shared
939	fi
940	fi
941	if [[ $node_usage != shared && $node_usage != not_shared ]]
942	then
943	printf "\n"
944	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
945	printf "\n \"shared\" or \"not_shared\""
946	locat=tasks_per_node; (( iec = 0 )); exit
947	fi
948
949	fi
950
951	# PRUEFEN, OB HOSTFILE EXISTIERT
952	if [[ -n $hostfile ]]
953	then
954	if [[ ! -f $hostfile ]]
955	then
956	printf "\n"
957	printf "\n +++ hostfile \"$hostfile\" does not exist"
958	locat=hostfile; exit
959	fi
960	fi
961
962	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
963	if [[ $host = ibmy && $do_remote = false ]]
964	then
965	if [[ ! -f $HOME/.rhosts ]]
966	then
967	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
968	printf "\n\n *** file:"
969	printf "\n $HOME/.rhosts"
970	printf "\n was created\n"
971	fi
972	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
973	then
974	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
975	printf "\n\n *** file:"
976	printf "\n $HOME/.rhosts"
977	printf "\n was extended by the name of the current host\n"
978	fi
979	fi
980
981	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
982	if [[ "$filetransfer_protocol" = "" ]]
983	then
984	case $host in
985	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
986	(*) filetransfer_protocol=ftp;;
987	esac
988	fi
989
990	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
991	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
992	then
993	printf "\n"
994	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
995	printf "\n only \"ftp\" or \"scp\" are allowed"
996	locat=options; exit
997	fi
998
999
1000	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1001	if [[ $queue = none ]]
1002	then
1003	case $host in
1004	(ibmb) if [[ $node_usage = shared ]]
1005	then
1006	queue=cshare
1007	else
1008	queue=csolo
1009	fi;;
1010	(ibmh) if [[ $node_usage = shared ]]
1011	then
1012	queue=cshare
1013	else
1014	queue=csolo
1015	fi;;
1016	(ibmy) queue=parallel;;
1017	(lctit) queue=default;;
1018	(nech) queue=none;;
1019	(neck) queue=P;;
1020	(unics) queue=unics;;
1021	esac
1022	fi
1023
1024
1025	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1026	case $host in
1027	(decalpha) netcdf_support=true
1028	netcdf_path=/usr/local/netcdf-3.5.1;;
1029	(ibmb\|ibmh) netcdf_support=true
1030	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1031	(ibms) netcdf_support=true
1032	netcdf_path=/applic/lib/NETCDF64;;
1033	(ibmy) netcdf_support=true
1034	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1035	(lcmuk) netcdf_support=true
1036	if [[ $scirocco = true ]]
1037	then
1038	netcdf_path=/opt/netcdf/3.6.2-beta4
1039	else
1040	netcdf_path=/muksoft/packages/netcdf/linux
1041	fi;;
1042	(lctit) netcdf_support=true
1043	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1044	(nech) netcdf_support=true
1045	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1046	(neck) netcdf_support=true
1047	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1048	esac
1049
1050
1051	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1052	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1053	# ERMITTELN
1054	(( i = 0 ))
1055	while (( i < iin ))
1056	do
1057	(( i = i + 1 ))
1058	(( maxcycle = 0 ))
1059
1060	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1061	if [[ "${actionin[$i]}" = di ]]
1062	then
1063	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1064	# REM-MASCHINE AUSWERTEN
1065	eval filename=${pathin[$i]}/${endin[$i]}
1066	else
1067	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1068	# REM-MASCHINE AUSWERTEN
1069	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1070	fi
1071
1072	# PRUEFEN AUF VORHANDENSEIN
1073	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1074	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1075	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1076	then
1077	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1078	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1079	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1080	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1081	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1082	if [[ "${transin[$i]}" != "locopt" ]]
1083	then
1084	printf "\n\n +++ INPUT-file: "
1085	if [[ "${extin[$i]}" = "" ]]
1086	then
1087	printf "\n $filename"
1088	else
1089	printf "\n $filename.${extin[$i]}"
1090	fi
1091	printf "\n does not exist\n"
1092	locat=input; exit
1093	else
1094	transin[$i]="unavailable"
1095	fi
1096	else
1097
1098	# ZYKLUSNUMMER FESTSTELLEN
1099	ls -1 -d $filename > filelist 2>/dev/null
1100	ls -1 -d $filename.* >> filelist 2>/dev/null
1101	while read zeile
1102	do
1103	cycle=$(print $zeile \| cut -f2 -d".")
1104	if [[ "$cycle" = "$zeile" ]]
1105	then
1106	(( icycle = 0 ))
1107	elif [[ "$cycle" = "${extin[$i]}" ]]
1108	then
1109	(( icycle = 0 ))
1110	else
1111	(( icycle = $cycle ))
1112	fi
1113	if (( icycle > maxcycle ))
1114	then
1115	(( maxcycle = icycle ))
1116	file_to_be_used=$zeile
1117	fi
1118	done <filelist
1119	rm filelist
1120
1121	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1122	if (( maxcycle > 0 ))
1123	then
1124	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1125	then
1126	filename=${filename}.$maxcycle.${extin[$i]}
1127	else
1128	filename=${filename}.$maxcycle
1129	fi
1130	else
1131	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1132	then
1133	filename=${filename}.${extin[$i]}
1134	fi
1135	fi
1136
1137	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1138	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1139	absnamein[$i]=$filename
1140	if (( maxcycle > 0 ))
1141	then
1142	if [[ "${actionin[$i]}" = di ]]
1143	then
1144	frelin[$i]=${endin[$i]}.$maxcycle
1145	else
1146	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1147	fi
1148	else
1149	if [[ "${actionin[$i]}" = di ]]
1150	then
1151	frelin[$i]=${endin[$i]}
1152	else
1153	frelin[$i]=${afname}${endin[$i]}
1154	fi
1155	fi
1156
1157	fi
1158	done
1159
1160
1161	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1162	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1163	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1164	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1165	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1166	(( i = 0 ))
1167	while (( i < iout ))
1168	do
1169	(( i = i + 1 ))
1170	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1171	then
1172	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1173	then
1174	actionout[$i]=""
1175	elif [[ "${actionout[$i]}" = tra ]]
1176	then
1177	actionout[$i]=a
1178	fi
1179	(( maxcycle = 0 ))
1180	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1181	eval catalogname=${pathout[$i]}
1182	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1183	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1184	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1185	then
1186
1187	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1188	if cat /dev/null > $filename
1189	then
1190	rm $filename
1191	else
1192
1193	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1194	if [[ ! -d $catalogname ]]
1195	then
1196	if mkdir -p $catalogname
1197	then
1198	printf "\n\n *** directory:"
1199	printf "\n $catalogname"
1200	printf "\n was created\n"
1201	else
1202	printf "\n\n +++ OUTPUT-file:"
1203	printf "\n $filename"
1204	printf "\n cannot be created, because directory does not exist"
1205	printf "\n and cannot be created either"
1206	printf "\n"
1207	locat=output ; exit
1208	fi 2>/dev/null
1209	else
1210	printf "\n\n +++ OUTPUT-file:"
1211	printf "\n $filename"
1212	printf "\n cannot be created, although directory exists"
1213	printf "\n"
1214	locat=output ; exit
1215	fi
1216	fi 2>/dev/null
1217	else
1218
1219	# ZYKLUSNUMMER FESTSTELLEN
1220	ls -1 -d $filename > filelist 2>/dev/null
1221	ls -1 -d $filename.* >> filelist 2>/dev/null
1222	while read zeile
1223	do
1224	cycle=$(print $zeile \| cut -f2 -d".")
1225	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1226	then
1227	(( icycle = 1 ))
1228	else
1229	(( icycle = $cycle + 1 ))
1230	fi
1231	if (( icycle > maxcycle ))
1232	then
1233	(( maxcycle = icycle ))
1234	fi
1235	done <filelist
1236	rm filelist
1237	fi
1238
1239	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1240	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1241	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1242	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1243	if [[ "${actionout[$i]}" != a ]]
1244	then
1245	if (( maxcycle > 0 ))
1246	then
1247	filename=${filename}.$maxcycle
1248	if cat /dev/null > $filename
1249	then
1250	rm $filename
1251	else
1252	printf "\n +++ OUTPUT-file:"
1253	printf "\n $filename"
1254	printf "\n cannot be created"
1255	locat=output ; exit
1256	fi
1257	fi
1258	else
1259	(( maxcycle = maxcycle - 1 ))
1260	if (( maxcycle > 0 ))
1261	then
1262	filename=${filename}.$maxcycle
1263	fi
1264	fi
1265
1266	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1267	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1268	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1269	pathout[$i]=$filename
1270	if (( maxcycle > 0 ))
1271	then
1272	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1273	else
1274	frelout[$i]=${fname}${endout[$i]}
1275	fi
1276
1277	fi
1278	done
1279
1280
1281	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1282	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1283	# UEBERSETZT ZU WERDEN)
1284	if [[ "$mainprog" = "" && "$executable" = "" ]]
1285	then
1286	printf "\n +++ neither main program nor executable defined"
1287	locat=source; exit
1288	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1289	then
1290	printf "\n +++ main program as well as executable defined"
1291	locat=source; exit
1292	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1293	then
1294	do_compile=false
1295	fi
1296
1297
1298	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1299	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1300	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1301	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1302	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1303	then
1304
1305	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1306	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1307
1308	if [[ $restart_run != true ]]
1309	then
1310	rm -rf SOURCES_FOR_RUN_$fname
1311	mkdir SOURCES_FOR_RUN_$fname
1312	fi
1313
1314
1315	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1316	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1317	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1318	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1319	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1320	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1321	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1322	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1323	# GESAMMELT
1324	if [[ "$source_list" = WRITE_PERMIT ]]
1325	then
1326
1327	source_list=""
1328	cd $source_path
1329
1330
1331	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1332	Names=$(ls -1 *.f90 2>&1)
1333	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1334	Names=$(ls -1 *.F90 2>&1)
1335	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1336	Names=$(ls -1 *.F 2>&1)
1337	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1338	Names=$(ls -1 *.f 2>&1)
1339	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1340	Names=$(ls -1 *.c 2>&1)
1341	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1342
1343
1344	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1345	for dateiname in $Filenames
1346	do
1347	if [[ -w $dateiname ]]
1348	then
1349	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1350	then
1351	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1352	source_list=$source_list"$dateiname "
1353	fi
1354	fi
1355	done
1356
1357	cd - > /dev/null
1358
1359
1360	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1361	then
1362
1363	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1364	source_list=""
1365	cd $source_path
1366
1367
1368	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1369	if [[ ! -d .svn ]]
1370	then
1371	printf "\n\n +++ source directory"
1372	printf "\n \"$source_path\" "
1373	printf "\n is not under control of \"subversion\"."
1374	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1375	fi
1376
1377
1378	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1379	Filenames=""
1380	svn status \| while read line
1381	do
1382	firstc=`echo $line \| cut -c1`
1383	if [[ $firstc = M \|\| $firstc = "?" ]]
1384	then
1385	Name=`echo "$line" \| cut -c8-`
1386	extension=`echo $Name \| cut -d. -f2`
1387	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1388	then
1389	Filenames="$Filenames "$Name
1390	fi
1391	fi
1392	done
1393
1394
1395	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1396	for dateiname in $Filenames
1397	do
1398	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1399	source_list=$source_list"$dateiname "
1400	done
1401
1402	cd - > /dev/null
1403
1404
1405	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1406	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1407	# VORHANDEN
1408	elif [[ "$source_list" != "" && $restart_run != true ]]
1409	then
1410
1411	cd $source_path
1412
1413	for filename in $source_list
1414	do
1415
1416	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1417	if [[ $(print $filename \| grep -c "/") != 0 ]]
1418	then
1419	printf "\n +++ source code file: $filename"
1420	printf "\n must not contain (\"/\") "
1421	locat=source; exit
1422	fi
1423
1424	if [[ ! -f $filename ]]
1425	then
1426	printf "\n +++ source code file: $filename"
1427	printf "\n does not exist"
1428	locat=source; exit
1429	else
1430	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1431	fi
1432
1433	done
1434
1435	cd - > /dev/null
1436
1437	fi
1438
1439
1440	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1441	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1442	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1443	if [[ $restart_run != true ]]
1444	then
1445
1446	if [[ ! -f "$source_path/$mainprog" ]]
1447	then
1448	printf "\n\n +++ main program: $mainprog"
1449	printf "\n does not exist in source directory"
1450	printf "\n \"$source_path\"\n"
1451	locat=source; exit
1452	else
1453	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1454	then
1455	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1456	source_list=${mainprog}" $source_list"
1457	fi
1458	fi
1459	fi
1460
1461
1462	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1463	if [[ $restart_run != true && "$add_source_path" != "" ]]
1464	then
1465
1466	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1467	if [[ ! -d $add_source_path ]]
1468	then
1469	printf "\n\n +++ WARNING: additional source code directory"
1470	printf "\n \"$add_source_path\" "
1471	printf "\n does not exist or is not a directory."
1472	printf "\n No source code will be used from this directory!\n"
1473	add_source_path=""
1474	sleep 3
1475	else
1476
1477	cd $add_source_path
1478
1479	Names=$(ls -1 *.f90 2>&1)
1480	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1481	Names=$(ls -1 *.F90 2>&1)
1482	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1483	Names=$(ls -1 *.F 2>&1)
1484	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1485	Names=$(ls -1 *.f 2>&1)
1486	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1487	Names=$(ls -1 *.c 2>&1)
1488	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1489
1490	cd - > /dev/null
1491	cd SOURCES_FOR_RUN_$fname
1492
1493	for dateiname in $AddFilenames
1494	do
1495	if [[ -f $dateiname ]]
1496	then
1497	printf "\n +++ source code file \"$dateiname\" found in additional"
1498	printf "\n source code directory \"$add_source_path\" "
1499	printf "\n as well as in directory \"$source_path\"."
1500	locat=source; exit
1501	fi
1502
1503	cp $add_source_path/$dateiname .
1504	source_list="$source_list $dateiname"
1505
1506	# Default User-Interface von der Liste entfernen, falls Datei
1507	# ein User-Interface enthaelt
1508	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1509	then
1510	if [[ -f user_interface.f90 ]]
1511	then
1512	rm -rf user_interface.f90
1513	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1514	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1515	printf "\n since a user-interface is found in file"
1516	printf "\n \"$add_source_path/$dateiname\" \n"
1517	sleep 3
1518	else
1519	printf "\n\n *** user-interface file \"$dateiname\" "
1520	printf "\n added to the files to be translated \n"
1521	sleep 3
1522	fi
1523	fi
1524	done
1525
1526	cd - > /dev/null
1527	fi
1528	fi
1529
1530
1531	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1532	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1533	if [[ $restart_run != true && -n $package_list ]]
1534	then
1535
1536	cd $source_path
1537
1538	for package in $package_list
1539	do
1540
1541	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1542
1543	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1544	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1545	# LIEFERT
1546	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1547
1548
1549	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1550	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1551	for source_list_name in $package_source_list
1552	do
1553	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1554	then
1555
1556	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1557	ending=`echo $source_list_name \| cut -f2 -d.`
1558	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1559	then
1560	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1561	source_list="$source_list $source_list_name"
1562	fi
1563	fi
1564	done
1565	done
1566
1567	cd - > /dev/null
1568	fi
1569
1570
1571	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1572	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1573	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1574	then
1575	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1576	if [[ ! -f $makefile ]]
1577	then
1578	printf "\n +++ file \"$makefile\" does not exist"
1579	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1580	locat=make; exit
1581	else
1582	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1583	fi
1584	fi
1585
1586	fi # do_compile=true
1587
1588
1589	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1590	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1591	if [[ $do_compile = true ]]
1592	then
1593
1594	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1595	# ZUSAMMENSETZEN
1596	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1597	then
1598	PPOPTS=-Dibm=ibm
1599	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1600	then
1601	PPOPTS=-Dnec
1602	else
1603	PPOPTS=-D$localhost
1604	fi
1605	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1606	then
1607	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1608	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1609	if [[ $netcdf_support = true ]]
1610	then
1611	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1612	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1613	fi
1614	if [[ $localhost = ibmy ]]
1615	then
1616	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1617	fi
1618	else
1619	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1620	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1621	if [[ $netcdf_support = true ]]
1622	then
1623	PPOPTS="$PPOPTS -Dnetcdf"
1624	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1625	fi
1626	fi
1627	if [[ -n $package_list ]]
1628	then
1629	for package in $package_list
1630	do
1631	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1632	then
1633	if [[ $package != "dvrp_graphics+1PE" ]]
1634	then
1635	PPOPTS="$PPOPTS -D$package=$package"
1636	else
1637	PPOPTS="$PPOPTS -Ddvrp_graphics"
1638	export use_seperate_pe_for_dvrp_output=true
1639	fi
1640	else
1641	if [[ $package != "dvrp_graphics+1PE" ]]
1642	then
1643	PPOPTS="$PPOPTS -D$package"
1644	else
1645	PPOPTS="$PPOPTS -Ddvrp_graphics"
1646	export use_seperate_pe_for_dvrp_output=true
1647	fi
1648	fi
1649	done
1650	fi
1651	if [[ -n $cpp_opts ]]
1652	then
1653	for popts in $cpp_opts
1654	do
1655	PPOPTS="$PPOPTS -D$popts"
1656	done
1657	fi
1658
1659	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1660	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1661
1662	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1663	if [[ $host = decalpha ]]
1664	then
1665	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1666	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1667	then
1668	# blanks in PPOPTS muessen durch "," ersetzt werden
1669	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1670	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1671	elif [[ $host = lcmuk ]]
1672	then
1673	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1674	elif [[ $host = lctit ]]
1675	then
1676	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1677	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1678	then
1679	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1680	else
1681	C_PPOPTS="$PPOPTS"
1682	fi
1683
1684	else
1685
1686
1687	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1688	if [[ $do_remote = false ]]
1689	then
1690	if [[ ! -f $executable ]]
1691	then
1692	printf "\n +++ executable file: $executable"
1693	printf "\n does not exist"
1694	locat=executable; exit
1695	fi
1696	fi
1697	fi
1698
1699
1700	# JOBMODUS FESTSTELLEN
1701	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1702	then
1703	jobmo=BATCH
1704	else
1705	jobmo=INTERACTIVE
1706	fi
1707
1708
1709	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1710	# DURCH BENUTZER ANDERWEITIG VEREINBART
1711	if [[ "$compiler_name" = "" ]]
1712	then
1713	case $localhost in
1714	(unics) compiler_name=f77;;
1715	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1716	then
1717	compiler_name=mpif90
1718	else
1719	compiler_name=ifc
1720	fi;;
1721	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1722	then
1723	compiler_name=mpif90
1724	echo ">>> compiler=mpif90"
1725	else
1726	compiler_name=pgf95
1727	echo ">>> compiler=pgf95"
1728	fi;;
1729	(nech) compiler_name=sxmpif90;;
1730	(decalpha) compiler_name=f95;;
1731	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1732	(*) printf "\n +++ unknown host name: $localhost \n";
1733	locat=localhost; exit;;
1734	esac
1735	fi
1736
1737
1738	# COMPILER AUF NECK UEBERSCHREIBEN
1739	[[ $localhost = neck ]] && compiler_name=mpif90
1740
1741
1742
1743	# PRAEPROZESSOR-PFAD BESTIMMEN
1744	case $localhost in
1745	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1746	esac
1747
1748
1749	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1750	kennung=$RANDOM
1751	if [[ "$tmp_user_catalog" = "" ]]
1752	then
1753	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1754	then
1755	tmp_user_catalog=$TMPDIR
1756	elif [[ $localhost = nech ]]
1757	then
1758	tmp_user_catalog=$WRKSHR
1759	else
1760	tmp_user_catalog=/tmp
1761	fi
1762	fi
1763	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1764
1765
1766	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1767	# BESTIMMEN
1768	if [[ "$tmp_data_catalog" = "" ]]
1769	then
1770	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1771	then
1772	tmp_data_catalog=$WORK/mrun_restart_data
1773	elif [[ $localhost = nech ]]
1774	then
1775	tmp_data_catalog=$WRKSHR/mrun_restart_data
1776	else
1777	tmp_data_catalog=/tmp/mrun_restart_data
1778	fi
1779	fi
1780
1781
1782	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1783	# ERSETZEN
1784	if [[ $do_remote = false && $do_compile = true ]]
1785	then
1786	eval fopts=\"$fopts\"
1787	eval lopts=\"$lopts\"
1788	fi
1789
1790
1791
1792	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1793	FOPTS="$fopts"
1794	LOPTS="$lopts"
1795	ROPTS="$ropts"
1796	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1797	then
1798	XOPT="-X $numprocs"
1799	fi
1800
1801
1802	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1803	# MIT EINGEBUNDEN WERDEN
1804	if [[ -n $package_list ]]
1805	then
1806	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1807	then
1808
1809	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1810	# DEM NOTEBOOK SCIROCCO
1811	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1812	then
1813	printf "\n"
1814	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1815	locat=parameter; exit
1816	fi
1817	if [[ $host = ibmh ]]
1818	then
1819	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1820	then
1821	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1822	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1823	else
1824	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1825	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1826	fi
1827	elif [[ $host = nech ]]
1828	then
1829	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1830	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1831	elif [[ $host = neck ]]
1832	then
1833	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1834	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1835	elif [[ $host = lcmuk ]]
1836	then
1837	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1838	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1839	fi
1840	fi
1841	fi
1842
1843
1844	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1845	if [[ $netcdf_support = true ]]
1846	then
1847	case $host in
1848	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1849	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1850	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1851	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1852	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1853	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1854	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1855	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1856	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1857	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1858	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1859	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1860
1861	esac
1862	fi
1863
1864	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1865	# GRAMM BENOETIGT
1866	done=false
1867	while [[ $done = false ]]
1868	do
1869	cputime=$cpumax
1870	if (( $cputime == 0 ))
1871	then
1872	printf "\n +++ cpu-time is undefined"
1873	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1874	printf "\n >>> "
1875	read cputime 1>/dev/null 2>&1
1876	else
1877	done=true
1878	fi
1879	cpumax=$cputime
1880	done
1881
1882	(( minuten = cputime / 60 ))
1883	(( sekunden = cputime - minuten * 60 ))
1884
1885
1886	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1887	if [[ $do_batch = true ]]
1888	then
1889	done=false
1890	while [[ $done = false ]]
1891	do
1892	if (( memory == 0 ))
1893	then
1894	printf "\n +++ memory demand is undefined"
1895	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1896	printf "\n >>> "
1897	read memory 1>/dev/null 2>&1
1898	else
1899	done=true
1900	fi
1901	done
1902	fi
1903
1904
1905	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1906	if [[ $do_remote = true && -z $remote_username ]]
1907	then
1908	while [[ -z $remote_username ]]
1909	do
1910	printf "\n +++ username on remote host \"$host\" is undefined"
1911	printf "\n >>> Please type username:"
1912	printf "\n >>> "
1913	read remote_username
1914	done
1915	mc="$mc -u$remote_username"
1916	fi
1917
1918	###########################################################################
1919	# HEADER-AUSGABE
1920	###########################################################################
1921
1922
1923	calltime=$(date)
1924	printf "\n"
1925	# [[ $silent = false ]] && clear
1926	printf "#--------------------------------------------------------------# \n"
1927	printf "\| $version$calltime \| \n"
1928	printf "\| \| \n"
1929	spalte1="called on:"; spalte2=$localhost_realname
1930	printf "\| $spalte1$spalte2 \| \n"
1931	if [[ $local_compile = false ]]
1932	then
1933	if [[ $do_remote = true ]]
1934	then
1935	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1936	else
1937	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1938	fi
1939	else
1940	spalte1="compiling test only!"; spalte2=""
1941	fi
1942	printf "\| $spalte1$spalte2 \| \n"
1943	if [[ -n $numprocs ]]
1944	then
1945	spalte1="number of PEs:"; spalte2=$numprocs
1946	printf "\| $spalte1$spalte2 \| \n"
1947	fi
1948	if [[ -n $tasks_per_node ]]
1949	then
1950	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1951	printf "\| $spalte1$spalte2 \| \n"
1952	fi
1953	if [[ $threads_per_task != 1 ]]
1954	then
1955	spalte1="threads per task:"; spalte2="$threads_per_task"
1956	printf "\| $spalte1$spalte2 \| \n"
1957	fi
1958	printf "\| \| \n"
1959	if [[ $do_compile = true ]]
1960	then
1961	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1962	printf "\| $spalte1$spalte2 \| \n"
1963	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1964	while [[ "$zeile" != "" ]]
1965	do
1966	spalte1=""
1967	spalte2=$zeile
1968	printf "\| $spalte1$spalte2 \| \n"
1969	zeile=$(echo "$zeile" \| cut -c41-)
1970	done
1971
1972	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1973	printf "\| $spalte1$spalte2 \| \n"
1974	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1975	while [[ "$zeile" != "" ]]
1976	do
1977	spalte1=""
1978	spalte2=$zeile
1979	printf "\| $spalte1$spalte2 \| \n"
1980	zeile=$(echo "$zeile" \| cut -c41-)
1981	done
1982
1983	spalte1=linker-options:; spalte2=$LOPTS
1984	printf "\| $spalte1$spalte2 \| \n"
1985	zeile=$(echo "$LOPTS" \| cut -c41-)
1986	while [[ "$zeile" != "" ]]
1987	do
1988	spalte1=""
1989	spalte2=$zeile
1990	printf "\| $spalte1$spalte2 \| \n"
1991	zeile=$(echo "$zeile" \| cut -c41-)
1992	done
1993
1994	spalte1="main program":; spalte2=$mainprog
1995	printf "\| $spalte1$spalte2 \| \n"
1996	if [[ "$use_makefile" = true ]]
1997	then
1998	spalte1="using \"make\" for com"; spalte2="piling and linking"
1999	printf "\| $spalte1$spalte2 \| \n"
2000	fi
2001	# if [[ $vtk_graphics = true ]]
2002	# then
2003	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2004	# printf "\| $spalte1$spalte2 \| \n"
2005	# fi
2006	else
2007	spalte1=executable:; spalte2=$executable
2008	printf "\| $spalte1$spalte2 \| \n"
2009	fi
2010	printf "\| \| \n"
2011	spalte1="base name of files":; spalte2=$fname
2012	printf "\| $spalte1$spalte2 \| \n"
2013	if [[ $fname != $afname ]]
2014	then
2015	spalte1="base name of input files":; spalte2=$afname
2016	printf "\| $spalte1$spalte2 \| \n"
2017	fi
2018	spalte1="INPUT control list":; spalte2=$input_list
2019	printf "\| $spalte1$spalte2 \| \n"
2020	spalte1="OUTPUT control list":; spalte2=$output_list
2021	printf "\| $spalte1$spalte2 \| \n"
2022
2023	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2024	then
2025	spalte1="memory demand / PE":; spalte2="$memory MB"
2026	printf "\| $spalte1$spalte2 \| \n"
2027	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2028	printf "\| $spalte1$spalte2 \| \n"
2029	fi
2030
2031	if [[ $do_compile = true ]]
2032	then
2033	printf "\| \| \n"
2034	printf "\| Files to be compiled: \| \n"
2035	zeile=$source_list
2036	while [[ "$zeile" != "" ]]
2037	do
2038	spalte3=$zeile
2039	printf "\| $spalte3 \| \n"
2040	zeile=$(echo "$zeile" \| cut -c61-)
2041	done
2042	fi
2043	printf "#--------------------------------------------------------------#"
2044
2045
2046
2047	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2048	if [[ $do_trace = true ]]
2049	then
2050	(( i = 0 ))
2051	while (( i < iin ))
2052	do
2053	(( i = i + 1 ))
2054	if (( i == 1 ))
2055	then
2056	printf "\n\n >>> INPUT-file assignments:\n"
2057	fi
2058	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2059	done
2060	(( i = 0 ))
2061	while (( i < iout ))
2062	do
2063	(( i = i + 1 ))
2064	if (( i == 1 ))
2065	then
2066	printf "\n\n >>> OUTPUT-file assignments:\n"
2067	fi
2068	printf "\n ${localout[$i]} : ${pathout[$i]}"
2069	done
2070	(( i = 0 ))
2071	while (( i < iic ))
2072	do
2073	(( i = i + 1 ))
2074	if (( i == 1 ))
2075	then
2076	printf "\n\n >>> INPUT-commands:\n"
2077	fi
2078	printf "\n ${in_command[$i]}"
2079	done
2080	(( i = 0 ))
2081	while (( i < ioc ))
2082	do
2083	(( i = i + 1 ))
2084	if (( i == 1 ))
2085	then
2086	printf "\n\n >>> OUTPUT-commands:\n"
2087	fi
2088	printf "\n ${out_command[$i]}"
2089	done
2090	fi
2091
2092
2093	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2094	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2095	then
2096	antwort=dummy
2097	printf "\n\n"
2098	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2099	do
2100	printf " >>> everything o.k. (y/n) ? "
2101	read antwort
2102	done
2103	if [[ $antwort = n \|\| $antwort = N ]]
2104	then
2105	locat=user_abort; (( iec = 0 )); exit
2106	fi
2107	if [[ $do_batch = true ]]
2108	then
2109	printf " >>> batch-job will be created and submitted"
2110	else
2111	if [[ $local_compile = false ]]
2112	then
2113	printf " >>> MRUN will now continue to execute on this machine"
2114	else
2115	printf " >>> a test compilation will now be carried out on this machine"
2116	fi
2117	fi
2118	fi
2119
2120
2121
2122
2123	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2124	# CHENDE AKTIONEN DURCHGEFUEHRT
2125	if [[ $do_batch = false ]]
2126	then
2127
2128
2129	# TEMPORAEREN KATALOG ERZEUGEN
2130	mkdir -p $TEMPDIR
2131	chmod go+rx $TEMPDIR
2132	tmpcreate=true
2133
2134
2135	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2136	# TEMPORAERES VERZEICHNIS KOPIEREN
2137	if [[ $do_compile = true ]]
2138	then
2139
2140	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2141	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2142	if [[ $localhost = nech ]]
2143	then
2144	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2145	if mkdir -p $TEMPDIR_COMPILE
2146	then
2147	printf "\n *** \"$TEMPDIR_COMPILE\" "
2148	printf "\n is generated as temporary directory for cross compiling\n"
2149	else
2150	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2151	printf "\n needed for cross compilation failed"
2152	locat=compile
2153	exit
2154	fi
2155	else
2156	TEMPDIR_COMPILE=$TEMPDIR
2157	fi
2158
2159	if [[ "$use_makefile" = true ]]
2160	then
2161
2162	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2163	line=""
2164	grep "%depository_path" $config_file \| while read line
2165	do
2166	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2167	then
2168	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2169	then
2170	global_depository_path=`echo $line \| cut -d" " -s -f2`
2171	fi
2172	fi
2173	done
2174
2175	line=""
2176	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2177	do
2178	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2179	then
2180	local_depository_path=`echo $line \| cut -d" " -s -f2`
2181	fi
2182	done
2183
2184	if [[ "$local_depository_path" = "" ]]
2185	then
2186	if [[ "$global_depository_path" != "" ]]
2187	then
2188	local_depository_path=$global_depository_path
2189	else
2190	printf "\n\n +++ no depository path found in configuration file"
2191	printf "\n for local host \"$localhost\" "
2192	printf "\n please set \"\%depository_path\" in configuration file\n"
2193	locat=config_file; exit
2194	fi
2195	fi
2196	eval local_depository_path=$local_depository_path
2197
2198	basename=`print $mainprog \| cut -f1 -d"."`
2199	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2200	if [[ ! -f $make_depository ]]
2201	then
2202	printf "\n"
2203	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2204	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2205	else
2206	cp $make_depository $TEMPDIR_COMPILE
2207	cd $TEMPDIR_COMPILE
2208	tar -xf $make_depository > /dev/null 2>&1
2209	cd - > /dev/null
2210	fi
2211
2212	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2213
2214	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2215	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2216	# MAKEFILE EINTRAGEN
2217	cd $TEMPDIR_COMPILE
2218	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2219	if [[ "$interface_file" != "" ]]
2220	then
2221	interface_file=`echo $interface_file \| cut -d"." -f1`
2222	mv Makefile Makefile_old
2223	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2224	fi
2225	cd - > /dev/null
2226	fi
2227	else
2228	cp $executable ${TEMPDIR}/a.out
2229	fi
2230
2231
2232	# WECHSEL IN TEMPORAEREN KATALOG
2233	cd $TEMPDIR
2234	printf "\n *** changed to temporary directory: $TEMPDIR"
2235
2236
2237	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2238	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2239	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2240	# ERMITTELN
2241	(( i = 0 ))
2242	while (( i < iout ))
2243	do
2244	(( i = i + 1 ))
2245	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2246	then
2247	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2248	else
2249	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2250	fi
2251	done
2252
2253
2254	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2255	if [[ $do_compile = true ]]
2256	then
2257
2258
2259	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2260	if [[ "$use_makefile" = true ]]
2261	then
2262	printf "\n\n\n *** compilation starts \n$striche\n"
2263	printf " *** compilation with make using following options:\n"
2264	printf " compilername: $compiler_name\n"
2265	printf " options: $FOPTS\n"
2266	printf " preprocessor-directives: $C_PPOPTS \n"
2267	printf " linker-options: $LOPTS \n"
2268	printf " source code files: $source_list \n"
2269
2270	if [[ $localhost = nech ]]
2271	then
2272	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2273	cp $TEMPDIR_COMPILE/a.out .
2274	[[ $? != 0 ]] && compile_error=true
2275	rm -rf $TEMPDIR_COMPILE
2276	else
2277	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2278	fi
2279
2280	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2281	else
2282
2283
2284	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2285	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2286	printf "\n\n\n *** compilation starts \n$striche\n"
2287
2288
2289	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2290	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2291	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2292	new_source_list=""
2293	for filename in $source_list
2294	do
2295
2296	basename=`print $filename \| cut -f1 -d"."`
2297
2298	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2299	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2300	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2301
2302	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2303	then
2304	new_source_list="$new_source_list "$filename
2305	else
2306
2307	if [[ "$comp_var" = "" ]]
2308	then
2309	SPECIAL_COMPILER=$compiler_name
2310	else
2311	SPECIAL_COMPILER=$comp_var
2312	fi
2313
2314	if [[ "$comp_opt_var" = "" ]]
2315	then
2316	SPECIAL_FOPTS=$FOPTS
2317	else
2318	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2319	fi
2320
2321	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2322	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2323	if [[ $? != 0 ]]
2324	then
2325	printf "\n +++ compiling error occured"
2326	locat=compile
2327	exit
2328	fi
2329	new_source_list="$new_source_list "${basename}.o
2330	fi
2331	done
2332	source_list="$new_source_list"
2333
2334
2335	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2336	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2337	printf " preprocessor-directives: $C_PPOPTS \n"
2338	printf " linker-options: $LOPTS \n"
2339	printf " source code files: $source_list \n"
2340
2341	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2342
2343	fi
2344	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2345	then
2346	printf "\n +++ error occured while compiling or linking"
2347	locat=compile
2348	exit
2349	else
2350	printf "$striche\n *** compilation finished \n"
2351	fi
2352	fi
2353
2354
2355	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2356	if [[ $local_compile = true ]]
2357	then
2358	cd $HOME
2359	rm -rf $TEMPDIR
2360	locat=local_compile; exit
2361	fi
2362
2363
2364	# BEREITSTELLEN DER INPUT-DATEIEN
2365	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2366	(( i = 0 ))
2367	while (( i < iin ))
2368	do
2369	(( i = i + 1 ))
2370	if (( i == 1 ))
2371	then
2372	printf "\n\n *** providing INPUT-files:\n$striche"
2373	fi
2374
2375
2376	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2377	if [[ "${transin[$i]}" = unavailable ]]
2378	then
2379	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2380	then
2381	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2382	printf "\n is not available!"
2383	else
2384	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2385	printf "\n is not available!"
2386	fi
2387	continue
2388	fi
2389
2390	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2391	files_for_pes=false; datentyp=file
2392	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2393	then
2394	files_for_pes=true; datentyp=directory
2395	actionin[$i]=""
2396	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2397	then
2398	actionin[$i]=""
2399	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2400	then
2401	files_for_pes=true; datentyp=directory
2402	actionin[$i]="ar"
2403	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2404	then
2405	actionin[$i]="ar"
2406	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2407	then
2408	files_for_pes=true; datentyp=directory
2409	actionin[$i]="fl"
2410	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2411	then
2412	actionin[$i]="fl"
2413	fi
2414
2415	if [[ $files_for_pes = true ]]
2416	then
2417	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2418	else
2419	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2420	fi
2421
2422	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2423	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2424	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2425	# SERVER ZU HOLEN
2426	if [[ "${actionin[$i]}" = fl ]]
2427	then
2428	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2429	if [[ $files_for_pes = false ]]
2430	then
2431	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2432	then
2433	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2434	got_tmp[$i]=true
2435	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2436	then
2437	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2438	printf "\n *** trying to use backup copy in \"$WORK\" "
2439	cp $WORK/${frelin[$i]} ${localin[$i]}
2440	else
2441	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2442	printf "\n or \"$tmp_data_catalog\" does not exist!"
2443	printf "\n *** trying to get copy from archive"
2444	actionin[$i]=ar
2445	fi
2446	else
2447	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2448	then
2449	mkdir ${localin[$i]}
2450	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2451	got_tmp[$i]=true
2452	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2453	then
2454	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2455	printf "\n *** trying to use backup copy in \"$WORK\" "
2456	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2457	else
2458	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2459	printf "\n or \"$tmp_data_catalog\" does not exist!"
2460	printf "\n *** trying to get copy from archive"
2461	actionin[$i]=ar
2462	fi
2463	fi
2464	fi
2465
2466
2467	# DATEI LIEGT AUF ARCHIV-SERVER
2468	if [[ "${actionin[$i]}" = ar ]]
2469	then
2470
2471	if [[ $files_for_pes = false ]]
2472	then
2473	printf "\n file will be restored from archive-system ($archive_system)!"
2474	else
2475	printf "\n directory will be restored from archive-system ($archive_system)!"
2476	fi
2477
2478	file_restored=false
2479
2480	if [[ $archive_system = asterix ]]
2481	then
2482	do_stagein=true
2483	(( stagein_anz = 0 ))
2484	while [[ $do_stagein = true ]]
2485	do
2486	if [[ $files_for_pes = false ]]
2487	then
2488	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2489	else
2490	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2491	fi
2492	cat STAGEIN_OUTPUT
2493	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2494	then
2495	file_restored=true
2496	do_stagein=false
2497	else
2498	(( stagein_anz = stagein_anz + 1 ))
2499	if (( stagein_anz == 10 ))
2500	then
2501	printf "\n +++ stagein stoped after 10 tries"
2502	locat=stage
2503	exit
2504	fi
2505	printf "\n +++ restoring from archive failed, trying again:"
2506	sleep 900
2507	fi
2508	done
2509	elif [[ $archive_system = DMF ]]
2510	then
2511	if [[ $files_for_pes = false ]]
2512	then
2513	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2514	locat=DMF
2515	exit
2516	else
2517	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2518	cp -r $ARCHIVE/${frelin[$i]} $PWD
2519	file_restored=true
2520	fi
2521	elif [[ $archive_system = tivoli ]]
2522	then
2523	if [[ $files_for_pes = false ]]
2524	then
2525	if [[ $localhost = ibmh ]]
2526	then
2527	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2528	else
2529	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2530	fi
2531	else
2532	(( inode = 0 ))
2533	while (( inode < nodes ))
2534	do
2535	if [[ $localhost = ibmh ]]
2536	then
2537	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2538	else
2539	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2540	fi
2541	(( inode = inode + 1 ))
2542	done
2543	fi
2544	file_restored=true
2545	elif [[ $archive_system = ut ]]
2546	then
2547	if [[ $files_for_pes = false ]]
2548	then
2549	cp $UT/${frelin[$i]} .
2550	else
2551	(( inode = 0 ))
2552	while (( inode < nodes ))
2553	do
2554	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2555	(( inode = inode + 1 ))
2556	done
2557	fi
2558	file_restored=true
2559	else
2560	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2561	locat=rearchive
2562	exit
2563	fi
2564
2565	if [[ $file_restored = true ]]
2566	then
2567
2568	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2569	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2570	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2571	if [[ $files_for_pes = false ]]
2572	then
2573	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2574	else
2575	mkdir $tmp_data_catalog/${frelin[$i]}
2576	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2577	fi
2578	got_tmp[$i]=true
2579
2580	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2581	mv ${frelin[$i]} ${localin[$i]}
2582
2583	fi
2584	fi
2585
2586
2587	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2588	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2589	then
2590
2591	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2592	then
2593
2594	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2595	printf "\n file will be provided for $numprocs processors"
2596	mkdir ${localin[$i]}
2597	ival=$numprocs
2598	(( ii = 0 ))
2599	while (( ii <= ival-1 ))
2600	do
2601	if (( ii < 10 ))
2602	then
2603	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2604	elif (( ii < 100 ))
2605	then
2606	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2607	elif (( ii < 1000 ))
2608	then
2609	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2610	else
2611	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2612	fi
2613	(( ii = ii + 1 ))
2614	done
2615
2616	else
2617
2618	if [[ $files_for_pes = true ]]
2619	then
2620
2621	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2622	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2623	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2624	# PER MOVE UMBENANNT WERDEN
2625	printf "\n providing $numprocs files for the respective processors"
2626	mkdir ${localin[$i]}
2627	cp -r ${absnamein[$i]}/* ${localin[$i]}
2628
2629	else
2630	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2631	cp ${absnamein[$i]} ${localin[$i]}
2632	fi
2633	fi
2634	fi
2635
2636	done
2637	if (( i != 0 ))
2638	then
2639	printf "\n$striche\n *** all INPUT-files provided \n"
2640	fi
2641
2642
2643	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2644	# LESEN VON PALM)
2645	cat > ENVPAR << %%END%%
2646	&envpar run_identifier = '$fname', host = '$localhost',
2647	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2648	maximum_cpu_time_allowed = ${cpumax}. /
2649
2650	%%END%%
2651
2652
2653	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2654	(( i = 0 ))
2655	while (( i < iic ))
2656	do
2657	(( i = i + 1 ))
2658	if (( i == 1 ))
2659	then
2660	printf "\n\n *** execution of INPUT-commands:\n$striche"
2661	fi
2662	printf "\n >>> ${in_command[$i]}"
2663	eval ${in_command[$i]}
2664	if (( i == iic ))
2665	then
2666	printf "\n$striche\n"
2667	fi
2668	done
2669
2670
2671	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2672	cpurest=${cpumax}.
2673
2674
2675	# PROGRAMMSTART
2676	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2677	PATH=$PATH:$TEMPDIR
2678
2679	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2680	then
2681	if [[ "$ENVIRONMENT" = BATCH ]]
2682	then
2683	printf "\n +++ debug is allowed in interactive mode only"
2684	locat=debug
2685	exit
2686	fi
2687	if [[ $localhost = decalpha ]]
2688	then
2689	dxladebug a.out
2690	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2691	then
2692
2693	# SETUP THE IBM MPI ENVIRONMENT
2694	export MP_SHARED_MEMORY=yes
2695	export AIXTHREADS_SCOPE=S
2696	export OMP_NUM_THREADS=$threads_per_task
2697	export AUTHSTATE=files
2698	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2699
2700	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2701	export MP_ADAPTER_USE=shared
2702	export MP_CPU_USE=multiple
2703	export MP_TIMEOUT=1200
2704
2705	unset MP_TASK_AFFINITY
2706
2707	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2708	#(( ii = 1 ))
2709	#while (( ii <= $numprocs ))
2710	#do
2711	# echo $localhost_realname >> hostfile
2712	# (( ii = ii + 1 ))
2713	#done
2714	#export MP_HOSTFILE=hostfile
2715
2716	if [[ "$LOADLBATCH" = yes ]]
2717	then
2718	totalview poe a.out $ROPTS
2719	else
2720	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2721	export TVDSVRLAUNCHCMD=ssh
2722	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2723	fi
2724	else
2725	printf "\n +++ no debug available on \"$localhost\" "
2726	printf "\n or not implemented in mrun so far"
2727	locat=debug
2728	exit
2729	fi
2730	else
2731	if [[ -n $numprocs ]]
2732	then
2733
2734	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2735	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2736	then
2737	# SETUP THE IBM MPI ENVIRONMENT
2738	export MP_SHARED_MEMORY=yes
2739	export AIXTHREAD_SCOPE=S
2740	export OMP_NUM_THREADS=$threads_per_task
2741	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2742	export AUTHSTATE=files
2743	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2744	# export MP_PRINTENV=yes
2745
2746	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2747	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2748	export MP_WAIT_MODE=poll
2749	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2750	# export MP_EAGER_LIMIT=65535
2751
2752	# # TESTWEISE FUER TURBOMPI (JAN 05)
2753	# export MPJ_MTAB=128
2754	# export MPJ_ALLTOALL=1
2755	# export MPJ_ALLTOALLV=1
2756
2757	if [[ "$LOADLBATCH" = yes ]]
2758	then
2759	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2760	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2761	then
2762	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2763	else
2764	poe ./a.out $ROPTS > aout_output 2>&1
2765	fi
2766	else
2767	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2768	then
2769	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2770	elif [[ $localhost = ibmy ]]
2771	then
2772	if [[ -f $hostfile ]]
2773	then
2774	cp $hostfile hostfile
2775	else
2776	(( ii = 1 ))
2777	while (( ii <= $numprocs ))
2778	do
2779	echo $localhost_realname >> hostfile
2780	(( ii = ii + 1 ))
2781	done
2782	fi
2783	export MP_HOSTFILE=hostfile
2784	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2785	else
2786	if [[ "$host_file" = "" ]]
2787	then
2788	printf "\n +++ no hostfile given in configuration file"
2789	locat=config_file
2790	exit
2791	else
2792	eval host_file=$host_file
2793	fi
2794	export MP_HOSTFILE=$host_file
2795	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2796	fi
2797	fi
2798	elif [[ $host = nech \|\| $host = neck ]]
2799	then
2800	(( ii = nodes ))
2801	if [[ $ii = 1 ]]
2802	then
2803	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2804	export MPIPROGINF=YES
2805	echo "*** execution on single node with mpirun"
2806	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2807	else
2808	(( i = 0 ))
2809	while (( i < ii ))
2810	do
2811	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2812	(( i = i + 1 ))
2813	done
2814
2815	echo "#!/bin/sh" > mpi_exec_shell
2816	echo " " >> mpi_exec_shell
2817	echo "set -u" >> mpi_exec_shell
2818	echo "F_ERRCNT=0" >> mpi_exec_shell
2819	echo "MPIPROGINV=YES" >> mpi_exec_shell
2820	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2821	echo "cpurest=$cpurest" >> mpi_exec_shell
2822	echo "fname=$fname" >> mpi_exec_shell
2823	echo "localhost=$localhost" >> mpi_exec_shell
2824	echo "return_addres=$return_addres" >> mpi_exec_shell
2825	echo "return_username=$return_username" >> mpi_exec_shell
2826	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2827	echo "write_binary=$write_binary" >> mpi_exec_shell
2828	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2829	echo " " >> mpi_exec_shell
2830	echo "export F_ERRCNT" >> mpi_exec_shell
2831	echo "export MPIPROGINV" >> mpi_exec_shell
2832	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2833	echo "export cpurest" >> mpi_exec_shell
2834	echo "export fname" >> mpi_exec_shell
2835	echo "export localhost" >> mpi_exec_shell
2836	echo "export return_addres" >> mpi_exec_shell
2837	echo "export return_username" >> mpi_exec_shell
2838	echo "export tasks_per_node" >> mpi_exec_shell
2839	echo "export write_binary" >> mpi_exec_shell
2840	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2841	echo " " >> mpi_exec_shell
2842	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2843
2844	chmod u+x mpi_exec_shell
2845	export MPIPROGINF=YES
2846	mpirun -f multinode_config &
2847	wait
2848
2849	fi
2850	elif [[ $host = lcmuk ]]
2851	then
2852
2853	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2854	# DOES NOT EXIST
2855	if [[ -f $hostfile ]]
2856	then
2857	cp $hostfile hostfile
2858	else
2859	(( ii = 1 ))
2860	while (( ii <= $numprocs / $threads_per_task ))
2861	do
2862	echo $localhost_realname >> hostfile
2863	(( ii = ii + 1 ))
2864	done
2865	fi
2866	(( ii = $numprocs / $threads_per_task ))
2867	eval zeile=\"`head -n $ii hostfile`\"
2868	printf "\n *** running on: $zeile"
2869	export OMP_NUM_THREADS=$threads_per_task
2870	if [[ $threads_per_task != 1 ]]
2871	then
2872	printf "\n threads per task: $threads_per_task"
2873	fi
2874	printf "\n\n"
2875	if [[ $scirocco = true ]]
2876	then
2877	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2878	else
2879	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2880	fi
2881	elif [[ $host = decalpha ]]
2882	then
2883	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2884	elif [[ $host = lctit ]]
2885	then
2886	export runfile=runfile.$kennung
2887
2888	echo "cd $PWD" > $runfile
2889	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2890	echo "export cpurest=$cpurest" >> $runfile
2891	echo "export fname=$fname" >> $runfile
2892	echo "export localhost=$localhost" >> $runfile
2893	echo "export return_addres=$return_addres" >> $runfile
2894	echo "export return_username=$return_username" >> $runfile
2895	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2896	echo "export write_binary=$write_binary" >> $runfile
2897	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2898	echo "./a.out" >> $runfile
2899	chmod u+x $runfile
2900
2901	if [[ "$QUEUE" = interactive ]]
2902	then
2903	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2904	else
2905	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2906	fi
2907
2908	rm $runfile
2909	else
2910	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2911	fi
2912	[[ $? != 0 ]] && execution_error=true
2913
2914
2915	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2916	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2917	then
2918	apprentice
2919	fi
2920	else
2921	a.out $ROPTS > aout_output 2>&1
2922	fi
2923	fi
2924	if [[ $? != 0 \|\| $execution_error = true ]]
2925	then
2926
2927	# ABBRUCH BEI LAUFZEITFEHLER
2928	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2929	printf "\n +++ runtime error occured"
2930	locat=execution
2931	exit
2932	else
2933	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2934	printf "\n$striche\n *** execution finished \n"
2935	fi
2936
2937
2938
2939	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2940	(( i = 0 ))
2941	while (( i < ioc ))
2942	do
2943	(( i = i + 1 ))
2944	if (( i == 1 ))
2945	then
2946	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2947	fi
2948	printf "\n >>> ${out_command[$i]}"
2949	eval ${out_command[$i]}
2950	if (( i == ioc ))
2951	then
2952	printf "\n$striche\n"
2953	fi
2954	done
2955
2956
2957	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2958	if [[ $do_trace = true ]]
2959	then
2960	printf "\n\n"
2961	ls -al
2962	fi
2963
2964
2965
2966	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2967	(( i = 0 ))
2968	while (( i < iout ))
2969	do
2970	(( i = i + 1 ))
2971	if (( i == 1 ))
2972	then
2973	printf "\n\n *** saving OUTPUT-files:\n$striche"
2974	fi
2975
2976	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2977	files_for_pes=false; filetyp=file
2978	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2979	then
2980	files_for_pes=true; filetyp=directory
2981	actionout[$i]=""
2982	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2983	then
2984	actionout[$i]=""
2985	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2986	then
2987	files_for_pes=true; filetyp=directory
2988	actionout[$i]="ar"
2989	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2990	then
2991	actionout[$i]="ar"
2992	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2993	then
2994	files_for_pes=true; filetyp=directory
2995	actionout[$i]="fl"
2996	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2997	then
2998	actionout[$i]="fl"
2999	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3000	then
3001	files_for_pes=true; filetyp=directory
3002	actionout[$i]="tr"
3003	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3004	then
3005	actionout[$i]="tr"
3006	fi
3007
3008	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3009	then
3010	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3011	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3012	then
3013	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3014	else
3015
3016
3017	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3018	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3019	# REMOTE-RECHNUNGEN
3020	if [[ "${actionout[$i]}" = tr ]]
3021	then
3022	if [[ $localhost != $fromhost ]]
3023	then
3024	if [[ $files_for_pes = false ]]
3025	then
3026	cps=""
3027	cst=""
3028	else
3029	cps=-c
3030	cst="/"
3031	fi
3032	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3033	then
3034
3035	# TRANSFER IN EIGENSTAENDIGEM JOB
3036	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3037	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3038	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3039	if [[ $files_for_pes = false ]]
3040	then
3041	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3042	else
3043	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3044	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3045	fi
3046
3047	echo "set -x" > transfer_${localout[$i]}
3048	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3049	if [[ $filetransfer_protocol = ftp ]]
3050	then
3051	if [[ $files_for_pes = true ]]
3052	then
3053	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3054	fi
3055	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3056	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3057	printf "\n or higher cycle\n"
3058	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3059	else
3060	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3061	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3062	printf "\n or higher cycle\n"
3063	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3064	fi
3065	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3066
3067	if [[ $localhost = nech ]]
3068	then
3069	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3070	else
3071	if [[ "$LOGNAME" = b323013 ]]
3072	then
3073	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3074	else
3075	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3076	fi
3077	fi
3078
3079	else
3080
3081	# TRANSFER INNERHALB DIESES JOBS
3082	transfer_failed=false
3083	if [[ $filetransfer_protocol = ftp ]]
3084	then
3085	if [[ $files_for_pes = true ]]
3086	then
3087	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3088	fi
3089	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3090	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3091	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3092	[[ $? != 0 ]] && transfer_failed=true
3093	else
3094	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3095	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3096	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3097	[[ $? != 0 ]] && transfer_failed=true
3098	fi
3099
3100	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3101	# LOKALER MASCHINE ANLEGEN
3102	if [[ $transfer_failed = true ]]
3103	then
3104	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3105	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3106
3107	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3108	# ANLEGEN.
3109	eval local_catalog=${pathout[$i]}
3110	if [[ ! -d $local_catalog ]]
3111	then
3112	printf " *** local directory does not exist. Trying to create:\n"
3113	printf " $local_catalog \n"
3114	mkdir -p $local_catalog
3115	fi
3116	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3117	transfer_problems=true
3118	fi
3119	fi
3120	else
3121
3122	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3123	actionout[$i]=""
3124	fi
3125	fi
3126
3127
3128	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3129	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3130	# REMOTE-RECHNUNGEN
3131	if [[ "${actionout[$i]}" = tra ]]
3132	then
3133	if [[ $localhost != $fromhost ]]
3134	then
3135	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3136	then
3137
3138	# TRANSFER IN EIGENSTAENDIGEM JOB
3139	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3140	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3141	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3142	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3143
3144	echo "set -x" > transfer_${localout[$i]}
3145	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3146	if [[ $filetransfer_protocol = ftp ]]
3147	then
3148	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3149	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3150	printf "\n or higher cycle\n"
3151	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3152	else
3153	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3154	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3155	printf "\n or higher cycle\n"
3156	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3157	fi
3158	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3159
3160	if [[ $localhost = nech ]]
3161	then
3162	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3163	else
3164	if [[ $LOGNAME = b323013 ]]
3165	then
3166	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3167	else
3168	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3169	fi
3170	fi
3171
3172	else
3173
3174	# TRANSFER INNERHALB DIESES JOBS
3175	transfer_failed=false
3176	if [[ $filetransfer_protocol = ftp ]]
3177	then
3178	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3179	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3180	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3181	[[ $? != 0 ]] && transfer_failed=true
3182	else
3183	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3184	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3185	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3186	[[ $? != 0 ]] && transfer_failed=true
3187	fi
3188
3189	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3190	# LOKALER MASCHINE ANLEGEN
3191	if [[ $transfer_failed = true ]]
3192	then
3193	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3194	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3195
3196	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3197	# ANLEGEN
3198	eval local_catalog=${pathout[$i]}
3199	if [[ ! -d $local_catalog ]]
3200	then
3201	printf " *** local directory does not exist. Trying to create:\n"
3202	printf " $local_catalog \n"
3203	mkdir -p $local_catalog
3204	fi
3205
3206	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3207	transfer_problems=true
3208	fi
3209	fi
3210	else
3211
3212	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3213	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3214	actionout[$i]=a
3215	fi
3216	fi
3217
3218
3219	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3220	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3221	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3222	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3223	if [[ "${actionout[$i]}" = fl ]]
3224	then
3225	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3226	chmod g+rx $tmp_data_catalog
3227	if [[ $files_for_pes = false ]]
3228	then
3229	printf "\n >>> OUTPUT: ${localout[$i]} to"
3230	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3231	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3232	else
3233	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3234	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3235	mkdir $tmp_data_catalog/${frelout[$i]}
3236	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3237	fi
3238
3239
3240	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3241	if [[ $store_on_archive_system = true ]]
3242	then
3243
3244	if [[ $archive_system = asterix ]]
3245	then
3246	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3247	if [[ $files_for_pes = false ]]
3248	then
3249	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3250	else
3251	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3252	fi
3253	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3254	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3255	echo "then" >> archive_${frelout[$i]}
3256	echo " do_stageout=false" >> archive_${frelout[$i]}
3257	echo "else" >> archive_${frelout[$i]}
3258	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3259	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3260	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3261	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3262	if [[ $files_for_pes = false ]]
3263	then
3264	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3265	else
3266	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3267	fi
3268	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3269	echo "fi" >> archive_${frelout[$i]}
3270	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3271	elif [[ $archive_system = DMF ]]
3272	then
3273	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3274	if [[ $files_for_pes = false ]]
3275	then
3276	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3277	locat=DMF
3278	exit
3279	else
3280	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3281	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3282	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3283	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3284	fi
3285	elif [[ $archive_system = tivoli ]]
3286	then
3287	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3288	if [[ $files_for_pes = false ]]
3289	then
3290	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3291	echo "set -x" >> archive_${frelout[$i]}
3292	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3293	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3294	else
3295
3296	echo "set -x" >> archive_${frelout[$i]}
3297	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3298	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3299	cd $tmp_data_catalog
3300	all_files=`ls -1 ${frelout[$i]}/*`
3301	cd - > /dev/null
3302	(( inode = 0 ))
3303	(( tp1 = tasks_per_node + 1 ))
3304	while (( inode < nodes ))
3305	do
3306	# echo "*** all_files = \"$all_files\" "
3307	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3308	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3309	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3310	# echo "*** files = \"$files\" "
3311	# echo "*** all_files = \"$all_files\" "
3312	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3313	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3314	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3315	(( inode = inode + 1 ))
3316	done
3317	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3318	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3319	fi
3320	elif [[ $archive_system = ut ]]
3321	then
3322	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3323	if [[ $files_for_pes = false ]]
3324	then
3325	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3326	echo "set -x" >> archive_${frelout[$i]}
3327	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3328	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3329	else
3330
3331	echo "set -x" >> archive_${frelout[$i]}
3332	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3333	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3334	cd $tmp_data_catalog
3335	all_files=`ls -1 ${frelout[$i]}/*`
3336	cd - > /dev/null
3337	(( inode = 0 ))
3338	(( tp1 = tasks_per_node + 1 ))
3339	while (( inode < nodes ))
3340	do
3341	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3342	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3343	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3344	(( inode = inode + 1 ))
3345	done
3346	fi
3347	elif [[ $archive_system = none ]]
3348	then
3349	printf " +++ archiving on $localhost not available!\n"
3350	fi
3351
3352	if [[ $archive_system != none ]]
3353	then
3354	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3355	then
3356	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3357	elif [[ $localhost = nech ]]
3358	then
3359	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3360	fi
3361	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3362	fi
3363	else
3364	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3365	fi
3366
3367
3368	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3369	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3370	if [[ $files_for_pes = false ]]
3371	then
3372	cat /dev/null > ${pathout[$i]}
3373	else
3374	mkdir -p ${pathout[$i]}
3375	fi
3376
3377	fi
3378
3379
3380	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3381	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3382	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3383	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3384	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3385	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3386	if [[ "${actionout[$i]}" = ar ]]
3387	then
3388	if [[ $files_for_pes = false ]]
3389	then
3390	printf "\n >>> OUTPUT: ${localout[$i]} to"
3391	printf "\n ${pathout[$i]}"
3392	printf "\n File will be copied to archive-system ($archive_system) !\n"
3393	else
3394	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3395	printf "\n ${pathout[$i]}"
3396	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3397	fi
3398	mv ${localout[$i]} ${frelout[$i]}
3399
3400	file_saved=false
3401
3402	if [[ $archive_system = asterix ]]
3403	then
3404	do_stageout=true
3405	(( stageout_anz = 0 ))
3406	while [[ $do_stageout = true ]]
3407	do
3408	if [[ $files_for_pes = false ]]
3409	then
3410	stageout ${frelout[$i]} > STAGE_OUTPUT
3411	else
3412	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3413	fi
3414	cat STAGE_OUTPUT
3415	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3416	then
3417	file_saved=true
3418	do_stageout=false
3419	else
3420	if [[ $files_for_pes = false ]]
3421	then
3422	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3423	else
3424	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3425	fi
3426	(( stageout_anz = stageout_anz + 1 ))
3427	if (( stageout_anz == 10 ))
3428	then
3429	printf "\n +++ stoped after 10 unsuccessful tries!"
3430	archive_save=false
3431	do_stageout=false
3432	else
3433	printf "\n *** new try to store on archive after 15 min:"
3434	sleep 900
3435	fi
3436	fi
3437	done
3438	elif [[ $archive_system = DMF ]]
3439	then
3440	if [[ $files_for_pes = false ]]
3441	then
3442	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3443	locat=DMF
3444	exit
3445	else
3446	rm -rf $ARCHIVE/${frelout[$i]}
3447	cp -r ${frelout[$i]} $ARCHIVE
3448	fi
3449	file_saved=true
3450	elif [[ $archive_system = tivoli ]]
3451	then
3452	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3453	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3454	# GELEGT WERDEN
3455	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3456	chmod g+rx $tmp_data_catalog
3457	if [[ $files_for_pes = false ]]
3458	then
3459	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3460	else
3461	mkdir $tmp_data_catalog/${frelout[$i]}
3462	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3463	fi
3464
3465	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3466	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3467	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3468	if [[ $files_for_pes = false ]]
3469	then
3470	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3471	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3472	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3473	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3474	else
3475	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3476	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3477	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3478	fi
3479
3480	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3481	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3482	file_saved=true
3483
3484	elif [[ $archive_system = ut ]]
3485	then
3486	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3487	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3488	# GELEGT WERDEN
3489	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3490	chmod g+rx $tmp_data_catalog
3491	if [[ $files_for_pes = false ]]
3492	then
3493	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3494	else
3495	mkdir $tmp_data_catalog/${frelout[$i]}
3496	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3497	fi
3498
3499	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3500	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3501	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3502	if [[ $files_for_pes = false ]]
3503	then
3504	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3505	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3506	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3507	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3508	else
3509	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3510	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3511	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3512	fi
3513
3514	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3515	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3516	file_saved=true
3517
3518	else
3519	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3520	archive_save=false
3521	fi
3522	if [[ $file_saved = true ]]
3523	then
3524	if [[ $files_for_pes = false ]]
3525	then
3526	cat /dev/null > ${pathout[$i]}
3527	else
3528	mkdir -p ${pathout[$i]}
3529	fi
3530	fi
3531	fi
3532
3533	# APPEND AUF LOKALER MASCHINE
3534	if [[ "${actionout[$i]}" = "a" ]]
3535	then
3536	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3537	cat ${localout[$i]} >> ${pathout[$i]}
3538	fi
3539
3540	# KOPIEREN AUF LOKALER MASCHINE
3541	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3542	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3543	then
3544
3545	# KOPIEREN AUF EINPROZESSORMASCHINE
3546	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3547	then
3548	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3549	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3550	else
3551	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3552	cp ${localout[$i]} ${pathout[$i]}
3553	fi
3554
3555	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3556	then
3557
3558	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3559	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3560	# WIRD DANN KOPIERT
3561	# PER MOVE UMBENANNT WERDEN
3562	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3563	cp -r ${localout[$i]} ${pathout[$i]}
3564
3565	fi
3566	fi
3567	done
3568	if (( i != 0 ))
3569	then
3570	if [[ $transfer_problems = true ]]
3571	then
3572	printf "\n$striche\n *** OUTPUT-files saved"
3573	printf "\n +++ WARNING: some data transfers failed! \n"
3574	else
3575	printf "\n$striche\n *** all OUTPUT-files saved \n"
3576	fi
3577	fi
3578
3579
3580	# EVENTUELL FOLGEJOB STARTEN
3581	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3582	if [[ -f CONTINUE_RUN ]]
3583	then
3584
3585	if [[ $archive_save = true ]]
3586	then
3587
3588	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3589	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3590	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3591	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3592	# HANDEN
3593	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3594	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3595	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3596	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3597	then
3598	mc=`echo $mc \| sed 's/#/f/g'`
3599	fi
3600
3601
3602	# JOB STARTEN
3603	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3604	echo " $mc"
3605	printf "\n$striche\n"
3606	if [[ $localhost != $fromhost ]]
3607	then
3608
3609	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3610	then
3611	echo "*** ssh will be used to initiate restart-runs!"
3612	echo " return_addres=\"$return_addres\" "
3613	echo " return_username=\"$return_username\" "
3614	if [[ $return_addres = 172.20.25.41 ]]
3615	then
3616	# WORKAROUND AUF SCIROCCO AM TIT
3617	print "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3618	else
3619	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3620	fi
3621	else
3622	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3623	locat=restart; exit
3624	fi
3625
3626	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3627	# DER AKTUELLE JOB ENDET
3628	sleep 30
3629
3630	else
3631
3632	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3633	# RUFEN WERDEN
3634	cd $LOCAL_PWD
3635	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3636	cd - > /dev/null
3637	fi
3638	printf "\n$striche\n *** restart-run initiated \n"
3639
3640
3641	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3642	# GEHOLT WORDEN SIND, LOESCHEN
3643	(( i = 0 ))
3644	while (( i < iin ))
3645	do
3646	(( i = i + 1 ))
3647	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3648	then
3649	rm -r $tmp_data_catalog/${frelin[$i]}
3650	fi
3651	done
3652
3653	else
3654
3655	printf "\n +++ no restart-run possible, since errors occured"
3656	printf "\n during the archive process"
3657	fi
3658
3659	fi
3660
3661
3662
3663	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3664	if [[ "$email_notification" != "" ]]
3665	then
3666
3667	if [[ $localhost != $fromhost ]]
3668	then
3669	if [[ -f CONTINUE_RUN ]]
3670	then
3671	echo "PALM restart run necessary" > email_text
3672	echo "description header of actual run:" >> email_text
3673	cat CONTINUE_RUN >> email_text
3674	echo "mrun-command to restart:" >> email_text
3675	echo "$mc" >> email_text
3676	else
3677	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3678	fi
3679	mail $email_notification < email_text
3680	printf "\n *** email notification sent to \"$email_notification\" "
3681	fi
3682	fi
3683
3684
3685
3686	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3687	cd $HOME
3688	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3689
3690	else
3691
3692
3693	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3694	# CHENDE AKTIONEN DURCHGEFUEHRT
3695
3696	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3697	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3698	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3699	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3700	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3701	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3702	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3703	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3704	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3705	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3706	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3707	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3708	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3709	if [[ $use_openmp = true ]]
3710	then
3711	mrun_com=${mrun_com}" -O"
3712	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3713	else
3714	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3715	fi
3716	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3717	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3718	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3719	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3720	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3721	if [[ $do_remote = true ]]
3722	then
3723	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3724	fi
3725
3726
3727	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3728	jobfile=jobfile.$RANDOM
3729
3730
3731	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3732	echo "mkdir $TEMPDIR" >> $jobfile
3733	echo "cd $TEMPDIR" >> $jobfile
3734
3735
3736	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3737	if [[ $do_trace = true ]]
3738	then
3739	echo "set -x" >> $jobfile
3740	else
3741	echo "set +vx" >> $jobfile
3742	fi
3743
3744
3745	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3746	# SOWIE GEGEBENENFALLS DES MAKEFILES
3747	if [[ $do_compile = true ]]
3748	then
3749
3750	source_catalog=SOURCES_FOR_RUN_$fname
3751
3752	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3753	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3754	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3755	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3756	echo "export SOURCES_COMPLETE=true" >> $jobfile
3757	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3758
3759	for filename in $source_list
3760	do
3761	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3762	echo "cat > $filename << \"%END%\"" >> $jobfile
3763	cat $source_catalog/$filename >> $jobfile
3764	echo " " >> $jobfile
3765	echo "%END%" >> $jobfile
3766	echo " " >> $jobfile
3767	done
3768
3769	if [[ "$use_makefile" = true ]]
3770	then
3771	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3772	echo "cat > Makefile << \"%END%\"" >> $jobfile
3773	cat $source_catalog/Makefile >> $jobfile
3774	echo " " >> $jobfile
3775	echo "%END%" >> $jobfile
3776	echo " " >> $jobfile
3777	fi
3778
3779	echo "cd - > /dev/null" >> $jobfile
3780
3781	fi
3782
3783
3784	# ABSPEICHERN DER KONFIGURATIONSDATEI
3785	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3786	echo "cat > $config_file << \"%END%\"" >> $jobfile
3787	cat $config_file >> $jobfile
3788	echo "%END%" >> $jobfile
3789	echo " " >> $jobfile
3790
3791
3792	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3793	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3794	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3795	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3796	echo "%END%" >> $jobfile
3797	if [[ $host = lctit ]]
3798	then
3799	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3800	echo "mv mrun_new $mrun_script_name" >> $jobfile
3801	fi
3802	echo "chmod u+x $mrun_script_name" >> $jobfile
3803	echo "execute_mrun=true" >> $jobfile
3804	echo " " >> $jobfile
3805
3806	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3807	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3808	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3809	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3810	if [[ $do_remote = true ]]
3811	then
3812	(( i = 0 ))
3813	while (( i < iin ))
3814	do
3815	(( i = i + 1 ))
3816	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3817	if [[ "${transin[$i]}" = job ]]
3818	then
3819	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3820	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3821	echo " " >> $jobfile
3822	echo "%END%" >> $jobfile
3823	else
3824	if [[ $filetransfer_protocol = ftp ]]
3825	then
3826	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3827	else
3828	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3829	fi
3830	fi
3831
3832	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3833	echo "if [[ \$? = 1 ]]" >> $jobfile
3834	echo "then" >> $jobfile
3835	echo " echo \" \" " >> $jobfile
3836	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3837	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3838	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3839	echo " execute_mrun=false" >> $jobfile
3840	echo "fi" >> $jobfile
3841	done
3842	fi
3843
3844	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3845	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3846	echo "LOCAL_PWD=$working_directory" >> $jobfile
3847	echo "export LOCAL_PWD" >> $jobfile
3848
3849	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3850	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3851	echo "export LOCAL_MRUN_PATH" >> $jobfile
3852
3853	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3854
3855	# MRUN AUF ZIELRECHNER AUFRUFEN
3856	echo "set -x" >> $jobfile
3857	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3858
3859	echo 'ls -al; echo `pwd`' >> $jobfile
3860	echo "cd \$HOME" >> $jobfile
3861	echo "rm -rf $TEMPDIR" >> $jobfile
3862
3863
3864
3865
3866	# JOB PER SUBJOB STARTEN
3867	if [[ $silent = false ]]
3868	then
3869	printf "\n "
3870	else
3871	printf "\n\n"
3872	fi
3873
3874	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3875	rm -rf $jobfile
3876
3877
3878	fi # ENDE REMOTE-TEIL
3879
3880
3881
3882	# ENDE DER PROZEDUR

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