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source: palm/trunk/SCRIPTS/mrun @ 250

Last change on this file since 250 was 246, checked in by raasch, 16 years ago
further changes for dvrp clipping
Property svn:keywords set to `Id Rev`
File size: 157.0 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 246 2009-02-27 11:42:39Z letzel $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[204]	155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
[210]	156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
	157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
	158	# argument
[211]	159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
	160	# file
	161	# 11/11/08 - Siggi - rules for using user code files changed: user
	162	# code splitted into one file per subroutine,
	163	# user can provide his/her own makefile, only
	164	# default source-code filenames are allowed
[215]	165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
[221]	166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
	167	# with environment variable mpilib
[223]	168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
	169	# using environment variable totalview
[246]	170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
	171	# interactive runs
[211]	172
	173
[1]	174
	175	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	176
	177	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	178	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	179	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	180
	181	AddFilenames=""
	182	additional_conditions=""
	183	add_source_path=""
	184	afname=""
	185	archive_save=true
	186	archive_system=none
	187	compiler_name=""
	188	cond1=""
	189	cond2=""
	190	config_file=.mrun.config
[206]	191	coupled_dist=""
	192	coupled_mode="mpi1"
[1]	193	cpp_opts=""
[82]	194	cpp_options=""
[1]	195	cpumax=0
	196	cpurest=0
	197	delete_temporary_catalog=true
	198	do_batch=false
	199	do_compile=true
	200	do_remote=false
	201	do_stagein=true
	202	do_stageout=true
	203	do_trace=false
	204	email_notification=""
	205	exclude=""
	206	executable=""
	207	execution_error=false
[67]	208	fimm=false
[1]	209	fname=test
	210	fromhost=""
[78]	211	global_revision=""
[122]	212	group_number=none
[1]	213	host=""
	214	host_file=""
	215	hp=""
	216	ignore_archive_error=false
	217	input_list=""
	218	interpreted_config_file=""
[164]	219	job_catalog="~/job_queue"
[1]	220	job_on_file=""
	221	keep_data_from_previous_run=false
[183]	222	link_local_input=false
[149]	223	link_local_output=false
[1]	224	localhost_realname=$(hostname)
	225	local_compile=false
	226	locat=normal
	227	mainprog=""
	228	makefile=""
	229	mc=$0
	230	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	231	do
	232	mc=`echo $mc \| cut -f2- -d"/"`
	233	done
	234	module_files=""
	235	mrun_script_name=$mc
[82]	236	netcdf_inc=""
	237	netcdf_lib=""
[1]	238	netcdf_support=false
	239	node_usage=default
	240	numprocs=""
[206]	241	numprocs_atmos=0
	242	numprocs_ocean=0
[1]	243	OOPT=""
	244	openmp=false
	245	output_list=""
	246	package_list=""
	247	punkte="..........................................................."
	248	queue=none
	249	read_from_config=""
[5]	250	restart_run=false
[146]	251	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	252	if [[ $return_addres = 130.75.105.158 ]]
	253	then
	254	return_addres=172.20.25.41
	255	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	256	fi
	257	return_password=""
	258	return_username=$LOGNAME
	259	remotecall=false
	260	remote_username=""
[102]	261	run_coupled_model=false
[1]	262	run_mode=""
	263	scirocco=false
	264	store_on_archive_system=true
	265	striche=" ----------------------------------------------------------------------------"
	266	silent=false
	267	source_list=""
	268	source_path=SOURCE
	269	tasks_per_node=""
	270	threads_per_task=1
	271	tmpcreate=false
	272	tmp_data_catalog=""
	273	transfer_problems=false
	274	usern=$LOGNAME
	275	working_directory=`pwd`
	276	TOPT=""
	277	XOPT=""
	278	zeit=$( date \| cut -c 12-19 )
	279
	280	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[206]	281	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	282
[66]	283	typeset -R30 calltime
[1]	284	typeset -L20 spalte1
	285	typeset -L40 spalte2
	286	typeset -L60 spalte3
	287	typeset -L35 string1=`date`
	288	typeset -L12 string2=$usern
	289	typeset -L12 string3=$localhost_realname
	290	typeset -L12 string4
	291	typeset -L12 string5
[201]	292	typeset -L30 version="MRUN 2.0 Rev$Rev: 246 $"
[1]	293
	294
	295
	296	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	297	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	298
	299	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	300	# EXPORTIERT WERDEN
	301	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	302	export group_number input_list memory numprocs output_list queue run_mode
[1]	303
	304
	305
	306	# FEHLERBEHANDLUNG
	307	# BEI EXIT:
[83]	308	trap 'rm -rf $working_directory/tmp_mrun
[69]	309	if [[ $locat != localhost ]]
[1]	310	then
[22]	311	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	312	# then
	313	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	314	#MRUN-calls on $localhost
	315	#
	316	#date and time user localhost remotehost termination mrun-command
	317	#--------------------------------------------------------------------------------------------------------------------
	318	#%STATEND%
	319	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	320	# fi
	321	#
	322	# # EINTRAG IN DIE STATISTIK-DATEI
	323	# string4=$host
	324	# string5=$locat
	325	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	326	# then
	327	# if [[ $do_batch = true ]]
	328	# then
	329	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	330	# else
	331	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	332	# fi
	333	# fi
[69]	334	echo " " > /dev/null
[1]	335	fi
	336
	337	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	338	then
	339
	340	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	341	(( i = 0 ))
	342	while (( i < iec ))
	343	do
	344	(( i = i + 1 ))
	345	printf "\n *** Execution of ERROR-command:\n"
	346	printf " >>> ${err_command[$i]}\n"
	347	eval ${err_command[$i]}
	348	done
	349	if [[ -n $interpreted_config_file ]] then
	350	rm -rf $interpreted_config_file
	351	fi
[71]	352	if [[ -n .mrun_environment ]] then
	353	rm -rf .mrun_environment
	354	fi
[1]	355	if [[ $tmpcreate = true ]]
	356	then
	357	printf "\n *** Contents of \"$TEMPDIR\":\n"
	358	ls -al; cd
	359	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	360	fi
	361	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	362	then
	363	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	364	fi
	365	printf "\n\n+++ MRUN killed \n\n"
	366	elif [[ $locat != control_c ]]
	367	then
	368	printf "\n\n --> all actions finished\n\n"
	369	printf " Bye, bye $usern !!\n\n"
	370	fi' exit
	371
	372
	373	# BEI TERMINAL-BREAK:
[83]	374	trap 'rm -rf $working_directory/tmp_mrun
[69]	375	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	376	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	377	then
	378	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	379	fi
	380	printf "\n+++ MRUN killed by \"^C\" \n\n"
	381	locat=control_c
	382	exit
	383	' 2
	384
	385
[22]	386	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	387	# BEEN SET
	388	if [[ "$PALM_BIN" = "" ]]
	389	then
	390	printf "\n +++ environment variable PALM_BIN has not been set"
	391	printf "\n please set it to the directory where the PALM scripts are located"
	392	locat=palm_bin; exit
	393	fi
[180]	394	export PATH=$PALM_BIN:$PATH
[22]	395
	396
[1]	397
	398	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	399	# FUER FOLGEJOBS BENOETIGT WIRD
[206]	400	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y: option
[1]	401	do
	402	case $option in
	403	(a) afname=$OPTARG;;
	404	(A) store_on_archive_system=false; mc="$mc -A";;
	405	(b) do_batch=true; mc="$mc -b";;
	406	(B) delete_temporary_catalog=false; mc="$mc -B";;
	407	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	408	(C) restart_run=true; mc="$mc -C";;
[1]	409	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
[210]	410	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
[79]	411	(F) job_on_file="-D"; mc="$mc -F";;
[122]	412	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	413	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	414	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	415	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	416	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	417	(I) ignore_archive_error=true; mc="$mc -I";;
	418	(k) keep_data_from_previous_run=true; mc="$mc -k";;
[210]	419	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
[1]	420	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	421	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	422	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	423	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	424	(O) use_openmp=true; mc="$mc -O";;
	425	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	426	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	427	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	428	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	429	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	430	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	431	(S) read_from_config=false; mc="$mc -S";;
	432	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	433	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	434	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	435	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	436	(v) silent=true; mc="$mc -v";;
	437	(x) do_trace=true;set -x; mc="$mc -x";;
	438	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[206]	439	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
[1]	440	(\?) printf "\n +++ unknown option $OPTARG \n"
	441	printf "\n --> type \"$0 ?\" for available options \n"
	442	locat=parameter;exit;;
	443	esac
	444	done
	445
	446
	447	# EVTL. POSITIONSPARAMETER EINLESEN
	448	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	449	shift OPTIND-1
	450
	451
	452	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	453	if [[ "$1" = "?" ]]
	454	then
	455	(printf "\n *** mrun can be called as follows:\n"
[206]	456	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -Y.. <modus>\n"
[1]	457	printf "\n Description of available options:\n"
	458	printf "\n Option Description Default-Value"
	459	printf "\n -a base name of input files equiv. -d"
	460	printf "\n -A no archiving when using file-attribute fl"
	461	printf "\n -b batch-job on local machine ---"
	462	printf "\n -B do not delete temporary directory at end ---"
	463	printf "\n -c configuration file .mrun.config"
	464	printf "\n -d base name of files attached to program test"
	465	printf "\n -D preprocessor(cpp)-directives \"\" "
	466	printf "\n -F create remote job file only ---"
	467	printf "\n -h execution host $localhost_realname"
	468	printf "\n -i INPUT control list \"\" "
	469	printf "\n -I archiving errors of previous batch-jobs"
	470	printf "\n will be ignored"
	471	printf "\n -k keep data from previous run"
	472	printf "\n -K additional conditions for controling"
	473	printf "\n usage of conditional code and"
	474	printf "\n env-variables in configuration file \"\" "
	475	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	476	printf "\n -M Makefile name Makefile"
	477	printf "\n -n node usage (shared/not_shared) depending on -h"
	478	printf "\n -o OUTPUT control list \"\" "
	479	printf "\n -O use OpenMP ---"
	480	printf "\n -p software package list \"\" "
	481	printf "\n -q queue \"$queue\" "
	482	printf "\n -r run control list (combines -i -o) \"\" "
	483	printf "\n -s filenames of routines to be compiled \"\" "
	484	printf "\n must end with .f, .f90, .F, or .c !"
	485	printf "\n use \"..\" for more than one file and wildcards"
	486	printf "\n -s TEST compiles all files with w-permit"
	487	printf "\n -S config file interpreted by shellscript ---"
	488	printf "\n -t allowed cpu-time in seconds (batch) 0"
	489	printf "\n -T tasks per node depending on -h"
	490	printf "\n -u username on remote machine \"\" "
	491	printf "\n -v no prompt for confirmation ---"
	492	printf "\n -x tracing of mrun for debug purposes ---"
	493	printf "\n -X # of processors (on parallel machines) 1"
[206]	494	printf "\n -Y run coupled model, \"#1 #2\" with"
	495	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
[1]	496	printf "\n "
	497	printf "\n Possible values of positional parameter <modus>:"
	498	printf "\n \"?\" - this outline \n\n") \| more
	499	exit
	500	elif [[ "$1" != "" ]]
	501	then
	502	printf "\n +++ positional parameter $1 unknown \n"
	503	locat=parameter; exit
	504	fi
	505
	506
	507
	508	# KURZE STARTMELDUNG
	509	printf "\n*** $version "
	510	printf "\n will be executed. Please wait ..."
	511
	512
[82]	513
	514	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	515	if [[ ! -f $config_file ]]
	516	then
	517	printf "\n\n +++ configuration file: "
	518	printf "\n $config_file"
	519	printf "\n does not exist"
	520	locat=connect; exit
	521	fi
	522
	523
	524	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	525	line=""
	526	grep "%host_identifier" $config_file > tmp_mrun
	527	while read line
	528	do
[206]	529	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[82]	530	then
	531	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	532	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	533	if [[ $localhost_realname = $HOSTNAME ]]
[82]	534	then
	535	localhost=$host_identifier
	536	break
	537	fi
	538	fi
	539	done < tmp_mrun
	540
	541	if [[ "$localhost" = "" ]]
	542	then
	543	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	544	printf "\n for local host \"$localhost_realname\"."
	545	printf "\n Please add line"
	546	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	547	printf "\n to the configuration file."
	548	locat=localhost; exit
	549	fi
	550
	551
	552	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	553	case $localhost_realname in
	554	(breg-en0\|berni-en0) archive_system=tivoli;;
	555	(cs*) archive_system=ut;;
	556	(fimm.bccs.uib.no) fimm=true;;
	557	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	558	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	559	(scirocco) scirocco=true;;
	560	esac
	561
	562
	563
[1]	564	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	565	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	566	[[ "$afname" = "" ]] && afname=$fname
	567
	568
	569	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	570	if [[ "$run_mode" != "" ]]
	571	then
	572	input_list="$input_list $run_mode"
	573	output_list="$output_list $run_mode"
	574	fi
	575
	576
	577	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	578	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	579	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	580	# STARTET)
	581	if [[ "$fromhost" = "" ]]
	582	then
	583	fromhost=$localhost
	584	fi
	585
	586
	587	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	588	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	589	then
	590	source_list=TEST
	591	local_compile=true
	592	host=$localhost
	593	fi
	594
	595
	596	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	597	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	598	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	599	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	600	if [[ -n $host && "$host" != $localhost ]]
	601	then
	602	do_batch=true
	603	do_remote=true
	604	case $host in
[206]	605	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4) true;;
[1]	606	(*) printf "\n"
[83]	607	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	608	printf "\n is not available"
[1]	609	locat=nqs; (( iec = 0 )); exit;;
	610	esac
	611	else
	612	host=$localhost
	613	fi
	614
	615
	616	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	617	if [[ -n $additional_conditions ]]
	618	then
[69]	619	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	620	cond1=`echo $additional_conditions \| cut -d" " -f1`
	621	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	622	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	623	if [[ -n $dummy ]]
	624	then
	625	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	626	locat=options; exit
	627	fi
	628	fi
	629
	630
[206]	631	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
	632	if [[ $run_coupled_model = true ]]
	633	then
	634
	635	if [[ -n $coupled_dist ]]
	636	then
	637
	638	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
	639	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
	640
	641	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
	642	then
	643
	644	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
	645	printf "\n PEs (total) : $numprocs"
	646	printf "\n PEs (atmosphere): $numprocs_atmos"
	647	printf "\n PEs (ocean) : $numprocs_ocean"
	648	locat=coupling; exit
	649
	650	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
	651	# THIS SHOULD BE REMOVED IN FUTURE
	652	elif (( $numprocs_ocean != $numprocs_atmos ))
	653	then
	654
	655	printf "\n +++ currently only 1:1 topologies are supported"
	656	printf "\n PEs (total) : $numprocs"
	657	printf "\n PEs (atmosphere): $numprocs_atmos"
	658	printf "\n PEs (ocean) : $numprocs_ocean"
	659	(( numprocs_atmos = $numprocs / 2 ))
	660	(( numprocs_ocean = $numprocs / 2 ))
	661	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
	662
	663	fi
	664
	665	else
	666
	667	(( numprocs_ocean = $numprocs / 2 ))
	668	(( numprocs_atmos = $numprocs / 2 ))
	669
	670	fi
	671	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
	672
	673	# GET coupled_mode FROM THE CONFIG FILE
	674	line=""
	675	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
	676	while read line
	677	do
	678	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
	679	then
	680	coupled_mode="mpi2"
	681	fi
	682	done < tmp_mrun
	683
	684	fi
	685
	686
[1]	687	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	688	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	689	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	690	then
	691	if [[ $ignore_archive_error = false ]]
	692	then
	693	printf "\n +++ data archiving of previous run failed"
	694	printf "\n see directory \~/job_queue on remote machine"
	695	locat=archive; exit
	696	else
	697	printf "\n +++ warning: data archiving in a previous run failed"
	698	printf "\n MRUN continues, trying to get backup copy"
	699	fi
	700	fi
	701
	702
	703
	704	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	705	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	706	if [[ "$read_from_config" = false ]]
	707	then
	708
	709	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	710	while read zeile
	711	do
	712	[[ $silent = false ]] && printf "."
	713
	714
	715	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	716	# ERSETZEN
	717	eval zeile=\"$zeile\"
	718
	719
	720	# INTERPRETATION DER ZEILE
[21]	721	if [[ "$(echo $zeile)" = "" ]]
[1]	722	then
[21]	723	# LEERZEILE, KEINE AKTION
	724	continue
[1]	725
[21]	726	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	727	then
	728
[1]	729	# ZEILE IST KOMMENTARZEILE
	730	true
	731
	732	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	733	then
	734
	735	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	736	zeile=$(echo $zeile \| cut -c2-)
[69]	737	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	738	var=`echo $zeile \| cut -d" " -f1`
	739	value=`echo $zeile \| cut -d" " -s -f2`
	740	for_host=`echo $zeile \| cut -d" " -s -f3`
	741	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	742	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	743
	744	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	745	then
	746
	747	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	748	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	749	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	750
	751
	752	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	753	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	754	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	755	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	756	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	757	# KONFIGURATIONSDATEI
	758	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	759	then
	760	eval $var=\$value
	761
	762	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	763	if [[ $do_trace = true ]]
	764	then
	765	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	766	fi
	767	fi
	768
	769	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	770	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	771	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	772	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	773	if [[ $var = host ]]
	774	then
	775	if [[ -n $host && "$host" != $localhost ]]
	776	then
	777	do_batch=true
	778	do_remote=true
	779	case $host in
[206]	780	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
[83]	781	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	782	printf "\n is not available"
[1]	783	locat=nqs; exit;;
	784	esac
	785	else
	786	host=$localhost
	787	fi
	788	fi
	789
	790	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	791	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	792	# DEN PROGRAMMEN BENOETIGT WERDEN
	793	export $var
	794	fi
	795
	796
	797
	798
	799	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	800	then
	801
	802	# ZEILE DEFINIERT ERROR-KOMMANDO
	803	(( iec = iec + 1 ))
	804	zeile=$(echo $zeile \| cut -c4-)
	805	err_command[$iec]="$zeile"
	806
	807	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	808	then
	809
	810	# ZEILE DEFINIERT INPUT-KOMMANDO
	811	(( iic = iic + 1 ))
	812	zeile=$(echo $zeile \| cut -c4-)
	813	in_command[$iic]="$zeile"
	814
	815	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	816	then
	817
	818	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	819	(( ioc = ioc + 1 ))
	820	zeile=$(echo $zeile \| cut -c4-)
	821	out_command[$ioc]="$zeile"
	822
	823	else
	824
	825	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	826	# s2a: in/out - Feld
	827	# s2b: loc - Feld (optional)
	828	# s2c: tr/ar - Feld (optional)
[69]	829	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	830	s1=`echo $zeile \| cut -d" " -f1`
	831	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	832	s2a=$(echo $s2 \| cut -d":" -f1)
	833	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	834	then
	835	s2b=""
	836	s2c=""
	837	else
[69]	838	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	839	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	840	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	841	fi
[69]	842	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	843	s3=`echo $zeile \| cut -d" " -f3`
	844	s4=`echo $zeile \| cut -d" " -s -f4`
	845	s5=`echo $zeile \| cut -d" " -s -f5`
	846	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	847
	848
	849	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	850	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	851	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	852	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	853	# HANDEN SEIN MUSS (D.H. s2b = loc)
	854	IFSALT="$IFS"; IFS="$IFS:"
	855	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	856	then
	857	found=false
	858	for actual in $input_list
	859	do
	860	for formal in $s3
	861	do
	862	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	863	done
	864	done
	865	if [[ $found = true ]]
	866	then
	867	(( iin = iin + 1 ))
	868	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	869	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	870	extin[$iin]=$s6
	871	fi
	872	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	873	then
	874	found=false
	875	for actual in $output_list
	876	do
	877	for formal in $s3
	878	do
	879	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	880	done
	881	done
	882	if [[ $found = true ]]
	883	then
	884	(( iout = iout + 1 ))
	885	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	886	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	887	fi
	888	elif [[ "$s2a" != in && "$s2a" != out ]]
	889	then
	890	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	891	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	892	locat=connect; exit
	893	fi
	894	IFS="$IFSALT"
	895	fi
	896	done < $config_file
	897
	898	else
	899
	900
	901	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	902	[[ $silent = false ]] && printf "..."
	903	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	904	export interpreted_config_file=.icf.$RANDOM
	905
	906
[69]	907
	908	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	909	# VERFUEGUNG STELLEN
	910	cat > .mrun_environment << %%END%%
	911	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	912	config_file = '$config_file', do_remote = '$do_remote',
	913	do_trace = '$do_trace', host = '$host',
	914	input_list = '$input_list', icf = '$interpreted_config_file',
	915	localhost = '$localhost', output_list = '$output_list' /
	916
	917	%%END%%
	918
	919	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	920	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	921	mrun_memory=$memory
[127]	922	mrun_group_number=$group_number
[69]	923	mrun_cpumax=$cpumax
	924	mrun_numprocs=$numprocs
	925
[66]	926	if [[ $localhost_realname = "gate" ]]
	927	then
	928	interpret_config_gate.x
	929	else
	930	interpret_config.x
	931	fi
[71]	932	rm .mrun_environment
[1]	933
[71]	934
[1]	935	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	936	chmod u+x $interpreted_config_file
	937	export PATH=$PATH:.
	938	. $interpreted_config_file
[71]	939	rm $interpreted_config_file
[1]	940
[71]	941
[69]	942	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	943	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	944	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	945	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	946	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	947
[1]	948	fi
	949
	950
	951	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	952	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	953	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	954	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	955	if [[ "$SOURCES_COMPLETE" = "" ]]
	956	then
	957
	958	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	959	# VEREINBART WURDE
	960	source_path=""
	961	line=""
	962	grep "%source_path" $config_file > tmp_mrun
	963	while read line
	964	do
	965	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	966	then
	967	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	968	then
	969	global_source_path=`echo $line \| cut -d" " -f2`
	970	fi
	971	fi
	972	done < tmp_mrun
	973
	974	line=""
	975	found=false
	976	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	977	while read line
	978	do
	979	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	980	then
	981	if [[ $found = true ]]
	982	then
	983	printf "\n\n +++ more than one source path found in configuration file"
	984	printf "\n for local host \"$localhost\" "
	985	locat=source_path; exit
	986	fi
	987	source_path=`echo $line \| cut -d" " -f2`
	988	found=true
	989	fi
	990	done < tmp_mrun
	991	rm tmp_mrun
	992
	993	if [[ "$source_path" = "" ]]
	994	then
	995	if [[ "$global_source_path" != "" ]]
	996	then
	997	source_path=$global_source_path
	998	else
	999	printf "\n\n +++ no source path found in configuration file"
	1000	printf "\n for local host \"$localhost\" "
	1001	locat=source_path; exit
	1002	fi
	1003	fi
	1004	eval source_path=$source_path
	1005
	1006	if [[ ! -d $source_path ]]
	1007	then
	1008	printf "\n\n +++ source path \"$source_path\" on local host"
	1009	printf "\n \"$localhost\" does not exist"
	1010	locat=source_path; exit
	1011	fi
	1012
	1013	fi
	1014
	1015
[78]	1016	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	1017	# DURCH OPTION -G MITGETEILT)
	1018	if [[ "$global_revision" = "" ]]
	1019	then
	1020	global_revision=`svnversion $source_path 2>/dev/null`
	1021	global_revision="Rev: $global_revision"
	1022	fi
[1]	1023
[78]	1024
[1]	1025	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	1026	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	1027	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	1028	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	1029	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	1030	if [[ -n $host && "$host" != $localhost ]]
	1031	then
	1032	do_batch=true
	1033	do_remote=true
	1034	case $host in
[206]	1035	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics\|lcxt4) true;;
[1]	1036	(*) printf "\n"
[83]	1037	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	1038	printf "\n is not available"
[1]	1039	locat=nqs; (( iec = 0 )); exit;;
	1040	esac
	1041	else
	1042	host=$localhost
	1043	fi
	1044
	1045
	1046	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	1047	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	1048	then
	1049
	1050	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	1051	if [[ ! -n $numprocs ]]
	1052	then
	1053	printf "\n"
	1054	printf "\n +++ option \"-K parallel\" requires additional specification"
	1055	printf "\n of the number of processors to be used by"
	1056	printf "\n mrun-option \"-X\" or by environment-variable"
	1057	printf "\n \"numprocs\" in the configuration file"
	1058	locat=numprocs; (( iec = 0 )); exit
	1059	fi
	1060
	1061	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	1062	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	1063	# GESAMTPROZESSORANZAHL IST
	1064	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	1065	then
	1066	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	1067	(( ival = $tasks_per_node ))
	1068	(( pes = numprocs ))
	1069	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	1070	# then
	1071	# (( pes = pes - 1 ))
	1072	# fi
	1073	(( ii = pes / ival ))
	1074	if (( pes - ii * ival > 0 ))
	1075	then
	1076	printf "\n"
	1077	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1078	printf "\n divisor of the total number of processors (option \"-X\")"
	1079	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1080	locat=tasks_per_node; (( iec = 0 )); exit
	1081	fi
	1082	fi
	1083
	1084	# IBMY HAT NUR EINEN KNOTEN
	1085	if [[ $host = ibmy ]]
	1086	then
	1087	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1088	then
	1089	printf "\n"
	1090	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1091	printf "\n total number of processors (option \"-X\")"
	1092	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1093	locat=tasks_per_node; (( iec = 0 )); exit
	1094	fi
	1095	fi
	1096
	1097	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1098	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1099	if [[ $use_openmp = true ]]
	1100	then
	1101	threads_per_task=$tasks_per_node
	1102	tasks_per_node=1
	1103	fi
	1104	OOPT="-O $threads_per_task"
	1105	TOPT="-T $tasks_per_node"
	1106
	1107	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1108	if [[ "$tasks_per_node" != "" ]]
	1109	then
	1110	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1111	fi
	1112
	1113	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1114	# SETZEN
	1115	if [[ $node_usage = default ]]
	1116	then
	1117	if [[ $host = ibms ]]
	1118	then
	1119	node_usage=shared
[118]	1120	elif [[ $host = lctit ]]
	1121	then
[129]	1122	node_usage=sla3
[181]	1123	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1124	then
	1125	node_usage=singlejob
[1]	1126	else
	1127	node_usage=not_shared
	1128	fi
	1129	fi
[181]	1130
	1131	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1132	then
	1133	printf "\n"
	1134	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1135	printf "\n \"shared\" or \"not_shared\""
	1136	locat=tasks_per_node; (( iec = 0 )); exit
	1137	fi
	1138
	1139	fi
	1140
	1141	# PRUEFEN, OB HOSTFILE EXISTIERT
	1142	if [[ -n $hostfile ]]
	1143	then
	1144	if [[ ! -f $hostfile ]]
	1145	then
	1146	printf "\n"
	1147	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1148	locat=hostfile; exit
	1149	fi
	1150	fi
	1151
	1152	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1153	if [[ $host = ibmy && $do_remote = false ]]
	1154	then
	1155	if [[ ! -f $HOME/.rhosts ]]
	1156	then
	1157	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1158	printf "\n\n *** file:"
	1159	printf "\n $HOME/.rhosts"
	1160	printf "\n was created\n"
	1161	fi
	1162	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1163	then
	1164	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1165	printf "\n\n *** file:"
	1166	printf "\n $HOME/.rhosts"
	1167	printf "\n was extended by the name of the current host\n"
	1168	fi
	1169	fi
	1170
	1171
	1172
	1173	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1174	if [[ $queue = none ]]
	1175	then
	1176	case $host in
	1177	(ibmb) if [[ $node_usage = shared ]]
	1178	then
	1179	queue=cshare
	1180	else
	1181	queue=csolo
	1182	fi;;
	1183	(ibmh) if [[ $node_usage = shared ]]
	1184	then
	1185	queue=cshare
	1186	else
	1187	queue=csolo
	1188	fi;;
	1189	(ibmy) queue=parallel;;
[191]	1190	(lcsgib) queue=bigq;;
	1191	(lcsgih) queue=bigq;;
[129]	1192	(lctit) queue=sla3;;
[1]	1193	(nech) queue=none;;
	1194	(neck) queue=P;;
	1195	(unics) queue=unics;;
	1196	esac
	1197	fi
	1198
	1199
	1200	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1201	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1202	# ERMITTELN
	1203	(( i = 0 ))
	1204	while (( i < iin ))
	1205	do
	1206	(( i = i + 1 ))
	1207	(( maxcycle = 0 ))
	1208
	1209	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1210	if [[ "${actionin[$i]}" = di ]]
	1211	then
	1212	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1213	# REM-MASCHINE AUSWERTEN
	1214	eval filename=${pathin[$i]}/${endin[$i]}
	1215	else
	1216	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1217	# REM-MASCHINE AUSWERTEN
	1218	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1219	fi
	1220
	1221	# PRUEFEN AUF VORHANDENSEIN
	1222	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1223	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1224	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1225	then
	1226	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1227	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1228	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1229	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1230	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1231	if [[ "${transin[$i]}" != "locopt" ]]
	1232	then
	1233	printf "\n\n +++ INPUT-file: "
	1234	if [[ "${extin[$i]}" = "" ]]
	1235	then
	1236	printf "\n $filename"
	1237	else
	1238	printf "\n $filename.${extin[$i]}"
	1239	fi
	1240	printf "\n does not exist\n"
	1241	locat=input; exit
	1242	else
	1243	transin[$i]="unavailable"
	1244	fi
	1245	else
	1246
	1247	# ZYKLUSNUMMER FESTSTELLEN
	1248	ls -1 -d $filename > filelist 2>/dev/null
	1249	ls -1 -d $filename.* >> filelist 2>/dev/null
	1250	while read zeile
	1251	do
	1252	cycle=$(print $zeile \| cut -f2 -d".")
	1253	if [[ "$cycle" = "$zeile" ]]
	1254	then
	1255	(( icycle = 0 ))
	1256	elif [[ "$cycle" = "${extin[$i]}" ]]
	1257	then
	1258	(( icycle = 0 ))
	1259	else
	1260	(( icycle = $cycle ))
	1261	fi
	1262	if (( icycle > maxcycle ))
	1263	then
	1264	(( maxcycle = icycle ))
	1265	file_to_be_used=$zeile
	1266	fi
	1267	done <filelist
	1268	rm filelist
	1269
	1270	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1271	if (( maxcycle > 0 ))
	1272	then
	1273	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1274	then
	1275	filename=${filename}.$maxcycle.${extin[$i]}
	1276	else
	1277	filename=${filename}.$maxcycle
	1278	fi
	1279	else
	1280	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1281	then
	1282	filename=${filename}.${extin[$i]}
	1283	fi
	1284	fi
	1285
	1286	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1287	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1288	absnamein[$i]=$filename
	1289	if (( maxcycle > 0 ))
	1290	then
	1291	if [[ "${actionin[$i]}" = di ]]
	1292	then
	1293	frelin[$i]=${endin[$i]}.$maxcycle
	1294	else
	1295	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1296	fi
	1297	else
	1298	if [[ "${actionin[$i]}" = di ]]
	1299	then
	1300	frelin[$i]=${endin[$i]}
	1301	else
	1302	frelin[$i]=${afname}${endin[$i]}
	1303	fi
	1304	fi
	1305
	1306	fi
	1307	done
	1308
	1309
	1310	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1311	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1312	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1313	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1314	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1315	(( i = 0 ))
	1316	while (( i < iout ))
	1317	do
	1318	(( i = i + 1 ))
	1319	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1320	then
	1321	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1322	then
	1323	actionout[$i]=""
	1324	elif [[ "${actionout[$i]}" = tra ]]
	1325	then
	1326	actionout[$i]=a
	1327	fi
	1328	(( maxcycle = 0 ))
	1329	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1330	eval catalogname=${pathout[$i]}
	1331	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1332	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1333	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1334	then
	1335
	1336	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1337	if cat /dev/null > $filename
	1338	then
	1339	rm $filename
	1340	else
	1341
	1342	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1343	if [[ ! -d $catalogname ]]
	1344	then
	1345	if mkdir -p $catalogname
	1346	then
	1347	printf "\n\n *** directory:"
	1348	printf "\n $catalogname"
	1349	printf "\n was created\n"
	1350	else
	1351	printf "\n\n +++ OUTPUT-file:"
	1352	printf "\n $filename"
	1353	printf "\n cannot be created, because directory does not exist"
	1354	printf "\n and cannot be created either"
	1355	printf "\n"
	1356	locat=output ; exit
	1357	fi 2>/dev/null
	1358	else
	1359	printf "\n\n +++ OUTPUT-file:"
	1360	printf "\n $filename"
	1361	printf "\n cannot be created, although directory exists"
	1362	printf "\n"
	1363	locat=output ; exit
	1364	fi
	1365	fi 2>/dev/null
	1366	else
	1367
	1368	# ZYKLUSNUMMER FESTSTELLEN
	1369	ls -1 -d $filename > filelist 2>/dev/null
	1370	ls -1 -d $filename.* >> filelist 2>/dev/null
	1371	while read zeile
	1372	do
	1373	cycle=$(print $zeile \| cut -f2 -d".")
	1374	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1375	then
	1376	(( icycle = 1 ))
	1377	else
	1378	(( icycle = $cycle + 1 ))
	1379	fi
	1380	if (( icycle > maxcycle ))
	1381	then
	1382	(( maxcycle = icycle ))
	1383	fi
	1384	done <filelist
	1385	rm filelist
	1386	fi
	1387
	1388	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1389	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1390	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1391	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1392	if [[ "${actionout[$i]}" != a ]]
	1393	then
	1394	if (( maxcycle > 0 ))
	1395	then
	1396	filename=${filename}.$maxcycle
	1397	if cat /dev/null > $filename
	1398	then
	1399	rm $filename
	1400	else
	1401	printf "\n +++ OUTPUT-file:"
	1402	printf "\n $filename"
	1403	printf "\n cannot be created"
	1404	locat=output ; exit
	1405	fi
	1406	fi
	1407	else
	1408	(( maxcycle = maxcycle - 1 ))
	1409	if (( maxcycle > 0 ))
	1410	then
	1411	filename=${filename}.$maxcycle
	1412	fi
	1413	fi
	1414
	1415	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1416	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1417	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1418	pathout[$i]=$filename
	1419	if (( maxcycle > 0 ))
	1420	then
	1421	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1422	else
	1423	frelout[$i]=${fname}${endout[$i]}
	1424	fi
	1425
	1426	fi
	1427	done
	1428
	1429
[83]	1430	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1431	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1432	then
	1433	if [[ "$dvrp_inc" = "" ]]
	1434	then
	1435	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1436	printf "\n This is required for the dvrp_graphics package.\n"
	1437	locat=dvrp; exit
	1438	fi
	1439	if [[ "$dvrp_lib" = "" ]]
	1440	then
	1441	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1442	printf "\n This is required for the dvrp_graphics package.\n"
	1443	locat=dvrp; exit
	1444	fi
	1445	fi
	1446
	1447
[1]	1448	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1449	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1450	# UEBERSETZT ZU WERDEN)
	1451	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1452	then
	1453	printf "\n +++ neither main program nor executable defined"
	1454	locat=source; exit
	1455	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1456	then
	1457	printf "\n +++ main program as well as executable defined"
	1458	locat=source; exit
	1459	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1460	then
	1461	do_compile=false
	1462	fi
	1463
	1464
[191]	1465	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1466	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1467	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1468	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1469	then
	1470	rm -rf SOURCES_FOR_RUN_$fname
	1471	mkdir SOURCES_FOR_RUN_$fname
	1472	fi
	1473
	1474
[1]	1475	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1476	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1477	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1478	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1479	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1480	then
	1481
[5]	1482	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1483	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1484
	1485
	1486	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1487	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1488	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1489	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1490	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1491	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1492	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1493	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1494	# GESAMMELT
[5]	1495	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1496	then
	1497
	1498	source_list=""
	1499	cd $source_path
	1500
	1501
	1502	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1503	Names=$(ls -1 *.f90 2>&1)
	1504	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1505	Names=$(ls -1 *.F90 2>&1)
	1506	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1507	Names=$(ls -1 *.F 2>&1)
	1508	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1509	Names=$(ls -1 *.f 2>&1)
	1510	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1511	Names=$(ls -1 *.c 2>&1)
	1512	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1513
	1514
	1515	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1516	for dateiname in $Filenames
	1517	do
	1518	if [[ -w $dateiname ]]
	1519	then
	1520	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1521	then
	1522	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1523	source_list=$source_list"$dateiname "
	1524	fi
	1525	fi
	1526	done
	1527
	1528	cd - > /dev/null
	1529
	1530
[5]	1531	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1532	then
	1533
	1534	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1535	source_list=""
	1536	cd $source_path
	1537
	1538
	1539	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1540	if [[ ! -d .svn ]]
	1541	then
	1542	printf "\n\n +++ source directory"
	1543	printf "\n \"$source_path\" "
	1544	printf "\n is not under control of \"subversion\"."
	1545	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1546	fi
	1547
	1548
	1549	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1550	Filenames=""
[69]	1551	svn status > tmp_mrun
	1552	while read line
[5]	1553	do
	1554	firstc=`echo $line \| cut -c1`
	1555	if [[ $firstc = M \|\| $firstc = "?" ]]
	1556	then
	1557	Name=`echo "$line" \| cut -c8-`
	1558	extension=`echo $Name \| cut -d. -f2`
	1559	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1560	then
	1561	Filenames="$Filenames "$Name
	1562	fi
	1563	fi
[69]	1564	done < tmp_mrun
[5]	1565
	1566
	1567	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1568	for dateiname in $Filenames
	1569	do
	1570	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1571	source_list=$source_list"$dateiname "
	1572	done
	1573
	1574	cd - > /dev/null
	1575
	1576
[1]	1577	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1578	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1579	# VORHANDEN
[5]	1580	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1581	then
	1582
	1583	cd $source_path
	1584
	1585	for filename in $source_list
	1586	do
	1587
	1588	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1589	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1590	then
	1591	printf "\n +++ source code file: $filename"
	1592	printf "\n must not contain (\"/\") "
	1593	locat=source; exit
	1594	fi
	1595
	1596	if [[ ! -f $filename ]]
	1597	then
	1598	printf "\n +++ source code file: $filename"
	1599	printf "\n does not exist"
	1600	locat=source; exit
	1601	else
	1602	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1603	fi
	1604
	1605	done
	1606
	1607	cd - > /dev/null
	1608
	1609	fi
	1610
	1611
	1612	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1613	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1614	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1615	if [[ $restart_run != true ]]
[1]	1616	then
	1617
	1618	if [[ ! -f "$source_path/$mainprog" ]]
	1619	then
	1620	printf "\n\n +++ main program: $mainprog"
	1621	printf "\n does not exist in source directory"
	1622	printf "\n \"$source_path\"\n"
	1623	locat=source; exit
	1624	else
	1625	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1626	then
	1627	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1628	source_list=${mainprog}" $source_list"
	1629	fi
	1630	fi
	1631	fi
	1632
	1633
[211]	1634	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1635	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
	1636	if [[ "$restart_run" != true ]]
	1637	then
	1638	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1639	if [[ ! -f $makefile ]]
	1640	then
	1641	printf "\n +++ file \"$makefile\" does not exist"
	1642	locat=make; exit
	1643	else
	1644	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1645	fi
	1646	fi
	1647
	1648
[1]	1649	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1650	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1651	then
	1652
	1653	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1654	if [[ ! -d $add_source_path ]]
	1655	then
	1656	printf "\n\n +++ WARNING: additional source code directory"
	1657	printf "\n \"$add_source_path\" "
	1658	printf "\n does not exist or is not a directory."
	1659	printf "\n No source code will be used from this directory!\n"
	1660	add_source_path=""
	1661	sleep 3
	1662	else
	1663
	1664	cd $add_source_path
[211]	1665	found=false
[1]	1666
	1667	Names=$(ls -1 *.f90 2>&1)
	1668	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1669	Names=$(ls -1 *.F90 2>&1)
	1670	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1671	Names=$(ls -1 *.F 2>&1)
	1672	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1673	Names=$(ls -1 *.f 2>&1)
	1674	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1675	Names=$(ls -1 *.c 2>&1)
	1676	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1677
	1678	cd - > /dev/null
	1679	cd SOURCES_FOR_RUN_$fname
	1680
[211]	1681	# COPY MAKEFILE IF EXISTING
	1682	if [[ -f $add_source_path/Makefile ]]
	1683	then
	1684	printf "\n\n *** user Makefile from directory"
	1685	printf "\n \"$add_source_path\" is used \n"
	1686	sleep 1
	1687	cp $add_source_path/Makefile .
	1688	fi
	1689
[1]	1690	for dateiname in $AddFilenames
	1691	do
	1692	if [[ -f $dateiname ]]
	1693	then
	1694	printf "\n +++ source code file \"$dateiname\" found in additional"
	1695	printf "\n source code directory \"$add_source_path\" "
[211]	1696	printf "\n but was also given with option \"-s\" which means that it should be taken"
	1697	printf "\n from directory \"$source_path\"."
[1]	1698	locat=source; exit
	1699	fi
	1700
	1701	cp $add_source_path/$dateiname .
	1702	source_list="$source_list $dateiname"
	1703
[211]	1704	# CHECK IF FILE IS CONTAINED IN MAKEFILE
	1705	if [[ $(grep -c $dateiname Makefile) = 0 ]]
	1706	then
	1707	printf "\n\n +++ user file \"$dateiname\" "
	1708	printf "\n is not listed in Makefile \n"
	1709	locat=source; exit
	1710	else
	1711
[1]	1712	# Default User-Interface von der Liste entfernen, falls Datei
	1713	# ein User-Interface enthaelt
[211]	1714	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1715	# then
	1716	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
	1717	# then
	1718	# rm -rf user_interface.f90
	1719	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
	1720	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
	1721	# printf "\n since a user-interface is found in file"
	1722	# printf "\n \"$add_source_path/$dateiname\" \n"
	1723	# sleep 3
	1724	# else
	1725	if [[ $found = false ]]
[1]	1726	then
[211]	1727	found=true
	1728	printf "\n\n *** following user file(s) added to the"
	1729	printf " files to be translated:\n "
[1]	1730	fi
[211]	1731	printf "$dateiname "
	1732	sleep 0.5
[1]	1733	fi
	1734	done
[211]	1735	[[ $found = true ]] && printf "\n"
[1]	1736	cd - > /dev/null
	1737	fi
	1738	fi
	1739
	1740
	1741	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1742	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1743	if [[ $restart_run != true && -n $package_list ]]
[1]	1744	then
	1745
	1746	cd $source_path
	1747
	1748	for package in $package_list
	1749	do
	1750
	1751	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1752
	1753	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1754	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1755	# LIEFERT
	1756	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1757
	1758
	1759	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1760	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1761	for source_list_name in $package_source_list
	1762	do
	1763	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1764	then
	1765
	1766	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1767	ending=`echo $source_list_name \| cut -f2 -d.`
	1768	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1769	then
	1770	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1771	source_list="$source_list $source_list_name"
	1772	fi
	1773	fi
	1774	done
	1775	done
	1776
	1777	cd - > /dev/null
	1778	fi
	1779
	1780
	1781	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1782	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[211]	1783	# if [[ "$restart_run" != true ]]
	1784	# then
	1785	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1786	# if [[ ! -f $makefile ]]
	1787	# then
	1788	# printf "\n +++ file \"$makefile\" does not exist"
	1789	# locat=make; exit
	1790	# else
	1791	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1792	# fi
	1793	# fi
[1]	1794
	1795	fi # do_compile=true
	1796
	1797
	1798	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1799	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1800	if [[ $do_compile = true ]]
	1801	then
	1802
	1803	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1804	# ZUSAMMENSETZEN
[83]	1805	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1806	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1807	then
[82]	1808	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1809	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1810	then
[82]	1811	cpp_options="$cpp_options -D__nec"
	1812	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1813	then
	1814	cpp_options="$cpp_options -D__lc"
[1]	1815	else
[82]	1816	cpp_options="$cpp_options -D__$localhost"
[1]	1817	fi
[83]	1818
	1819	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1820	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1821	then
[82]	1822	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1823	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1824	else
[82]	1825	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1826	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1827	fi
[83]	1828
	1829	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1830	if [[ -n $package_list ]]
	1831	then
	1832	for package in $package_list
	1833	do
	1834	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1835	then
	1836	if [[ $package != "dvrp_graphics+1PE" ]]
	1837	then
[82]	1838	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1839	else
[82]	1840	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1841	export use_seperate_pe_for_dvrp_output=true
	1842	fi
	1843	else
	1844	if [[ $package != "dvrp_graphics+1PE" ]]
	1845	then
[82]	1846	cpp_options="$cpp_options -D__$package"
[1]	1847	else
[82]	1848	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1849	export use_seperate_pe_for_dvrp_output=true
	1850	fi
	1851	fi
	1852	done
	1853	fi
[83]	1854
	1855	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1856	if [[ -n $cpp_opts ]]
	1857	then
	1858	for popts in $cpp_opts
	1859	do
[82]	1860	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1861	then
	1862	cpp_options="${cpp_options},-D__$popts=__$popts"
	1863	else
	1864	cpp_options="$cpp_options -D__$popts"
	1865	fi
[1]	1866	done
	1867	fi
	1868
	1869	else
	1870
	1871
	1872	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1873	if [[ $do_remote = false ]]
	1874	then
	1875	if [[ ! -f $executable ]]
	1876	then
	1877	printf "\n +++ executable file: $executable"
	1878	printf "\n does not exist"
	1879	locat=executable; exit
	1880	fi
	1881	fi
	1882	fi
	1883
	1884
	1885	# JOBMODUS FESTSTELLEN
	1886	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1887	then
	1888	jobmo=BATCH
	1889	else
	1890	jobmo=INTERACTIVE
	1891	fi
	1892
	1893
	1894	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1895	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1896	if [[ "$compiler_name" = "" ]]
	1897	then
[82]	1898
[220]	1899	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
[82]	1900	locat=compiler_name; exit
	1901
[1]	1902	fi
	1903
	1904
	1905	# COMPILER AUF NECK UEBERSCHREIBEN
	1906	[[ $localhost = neck ]] && compiler_name=mpif90
	1907
	1908
	1909
	1910	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1911	kennung=$RANDOM
	1912	if [[ "$tmp_user_catalog" = "" ]]
	1913	then
	1914	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1915	then
	1916	tmp_user_catalog=$TMPDIR
	1917	elif [[ $localhost = nech ]]
	1918	then
	1919	tmp_user_catalog=$WRKSHR
	1920	else
	1921	tmp_user_catalog=/tmp
	1922	fi
	1923	fi
	1924	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1925
	1926
	1927	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1928	# BESTIMMEN
	1929	if [[ "$tmp_data_catalog" = "" ]]
	1930	then
	1931	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1932	then
	1933	tmp_data_catalog=$WORK/mrun_restart_data
	1934	elif [[ $localhost = nech ]]
	1935	then
	1936	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1937	else
	1938	tmp_data_catalog=/tmp/mrun_restart_data
	1939	fi
	1940	fi
	1941
	1942
	1943	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1944	# ERSETZEN
	1945	if [[ $do_remote = false && $do_compile = true ]]
	1946	then
	1947	eval fopts=\"$fopts\"
	1948	eval lopts=\"$lopts\"
	1949	fi
	1950
	1951
	1952
	1953	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1954	fopts="$fopts $netcdf_inc $dvrp_inc"
	1955	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1956	ROPTS="$ropts"
[179]	1957	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1958	then
	1959	XOPT="-X $numprocs"
	1960	fi
	1961
	1962
	1963
	1964	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1965	# GRAMM BENOETIGT
	1966	done=false
	1967	while [[ $done = false ]]
	1968	do
	1969	cputime=$cpumax
	1970	if (( $cputime == 0 ))
	1971	then
[246]	1972	if [[ $do_batch = true ]]
	1973	then
	1974	printf "\n +++ cpu-time is undefined"
	1975	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1976	printf "\n >>> "
	1977	read cputime 1>/dev/null 2>&1
	1978	else
	1979	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
	1980	fi
[1]	1981	else
	1982	done=true
	1983	fi
	1984	cpumax=$cputime
	1985	done
	1986
	1987	(( minuten = cputime / 60 ))
	1988	(( sekunden = cputime - minuten * 60 ))
	1989
	1990
	1991	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1992	if [[ $do_batch = true ]]
	1993	then
	1994	done=false
	1995	while [[ $done = false ]]
	1996	do
	1997	if (( memory == 0 ))
	1998	then
	1999	printf "\n +++ memory demand is undefined"
	2000	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	2001	printf "\n >>> "
	2002	read memory 1>/dev/null 2>&1
	2003	else
	2004	done=true
	2005	fi
	2006	done
	2007	fi
	2008
	2009
	2010	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	2011	if [[ $do_remote = true && -z $remote_username ]]
	2012	then
	2013	while [[ -z $remote_username ]]
	2014	do
	2015	printf "\n +++ username on remote host \"$host\" is undefined"
	2016	printf "\n >>> Please type username:"
	2017	printf "\n >>> "
	2018	read remote_username
	2019	done
	2020	mc="$mc -u$remote_username"
	2021	fi
	2022
[221]	2023
	2024	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
	2025	if [[ $host = lcsgib \|\| $host = lcsgih ]]
	2026	then
	2027	[[ "$mpilib" = "" ]] && export mpilib=mpt
	2028	fi
	2029
	2030
	2031
[1]	2032	###########################################################################
	2033	# HEADER-AUSGABE
	2034	###########################################################################
	2035
	2036
	2037	calltime=$(date)
	2038	printf "\n"
	2039	# [[ $silent = false ]] && clear
	2040	printf "#--------------------------------------------------------------# \n"
	2041	printf "\| $version$calltime \| \n"
	2042	printf "\| \| \n"
	2043	spalte1="called on:"; spalte2=$localhost_realname
	2044	printf "\| $spalte1$spalte2 \| \n"
	2045	if [[ $local_compile = false ]]
	2046	then
	2047	if [[ $do_remote = true ]]
	2048	then
	2049	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	2050	else
	2051	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	2052	fi
	2053	else
	2054	spalte1="compiling test only!"; spalte2=""
	2055	fi
	2056	printf "\| $spalte1$spalte2 \| \n"
	2057	if [[ -n $numprocs ]]
	2058	then
	2059	spalte1="number of PEs:"; spalte2=$numprocs
	2060	printf "\| $spalte1$spalte2 \| \n"
	2061	fi
	2062	if [[ -n $tasks_per_node ]]
	2063	then
	2064	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	2065	printf "\| $spalte1$spalte2 \| \n"
	2066	fi
	2067	if [[ $threads_per_task != 1 ]]
	2068	then
	2069	spalte1="threads per task:"; spalte2="$threads_per_task"
	2070	printf "\| $spalte1$spalte2 \| \n"
	2071	fi
	2072	printf "\| \| \n"
	2073	if [[ $do_compile = true ]]
	2074	then
[82]	2075	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	2076	printf "\| $spalte1$spalte2 \| \n"
[82]	2077	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	2078	while [[ "$zeile" != "" ]]
	2079	do
	2080	spalte1=""
	2081	spalte2=$zeile
	2082	printf "\| $spalte1$spalte2 \| \n"
	2083	zeile=$(echo "$zeile" \| cut -c41-)
	2084	done
	2085
[82]	2086	spalte1=compiler-options:; spalte2="$fopts"
[1]	2087	printf "\| $spalte1$spalte2 \| \n"
[82]	2088	zeile=$(echo "$fopts" \| cut -c41-)
[1]	2089	while [[ "$zeile" != "" ]]
	2090	do
	2091	spalte1=""
	2092	spalte2=$zeile
	2093	printf "\| $spalte1$spalte2 \| \n"
	2094	zeile=$(echo "$zeile" \| cut -c41-)
	2095	done
	2096
[82]	2097	spalte1=linker-options:; spalte2=$lopts
[1]	2098	printf "\| $spalte1$spalte2 \| \n"
[82]	2099	zeile=$(echo "$lopts" \| cut -c41-)
[1]	2100	while [[ "$zeile" != "" ]]
	2101	do
	2102	spalte1=""
	2103	spalte2=$zeile
	2104	printf "\| $spalte1$spalte2 \| \n"
	2105	zeile=$(echo "$zeile" \| cut -c41-)
	2106	done
	2107
	2108	spalte1="main program":; spalte2=$mainprog
	2109	printf "\| $spalte1$spalte2 \| \n"
	2110	else
	2111	spalte1=executable:; spalte2=$executable
	2112	printf "\| $spalte1$spalte2 \| \n"
	2113	fi
	2114	printf "\| \| \n"
	2115	spalte1="base name of files":; spalte2=$fname
	2116	printf "\| $spalte1$spalte2 \| \n"
	2117	if [[ $fname != $afname ]]
	2118	then
	2119	spalte1="base name of input files":; spalte2=$afname
	2120	printf "\| $spalte1$spalte2 \| \n"
	2121	fi
	2122	spalte1="INPUT control list":; spalte2=$input_list
	2123	printf "\| $spalte1$spalte2 \| \n"
	2124	spalte1="OUTPUT control list":; spalte2=$output_list
	2125	printf "\| $spalte1$spalte2 \| \n"
	2126
	2127	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2128	then
	2129	spalte1="memory demand / PE":; spalte2="$memory MB"
	2130	printf "\| $spalte1$spalte2 \| \n"
	2131	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2132	printf "\| $spalte1$spalte2 \| \n"
	2133	fi
	2134
	2135	if [[ $do_compile = true ]]
	2136	then
	2137	printf "\| \| \n"
	2138	printf "\| Files to be compiled: \| \n"
	2139	zeile=$source_list
	2140	while [[ "$zeile" != "" ]]
	2141	do
	2142	spalte3=$zeile
	2143	printf "\| $spalte3 \| \n"
	2144	zeile=$(echo "$zeile" \| cut -c61-)
	2145	done
	2146	fi
	2147	printf "#--------------------------------------------------------------#"
	2148
	2149
	2150
	2151	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2152	if [[ $do_trace = true ]]
	2153	then
	2154	(( i = 0 ))
	2155	while (( i < iin ))
	2156	do
	2157	(( i = i + 1 ))
	2158	if (( i == 1 ))
	2159	then
	2160	printf "\n\n >>> INPUT-file assignments:\n"
	2161	fi
	2162	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2163	done
	2164	(( i = 0 ))
	2165	while (( i < iout ))
	2166	do
	2167	(( i = i + 1 ))
	2168	if (( i == 1 ))
	2169	then
	2170	printf "\n\n >>> OUTPUT-file assignments:\n"
	2171	fi
	2172	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2173	done
	2174	(( i = 0 ))
	2175	while (( i < iic ))
	2176	do
	2177	(( i = i + 1 ))
	2178	if (( i == 1 ))
	2179	then
	2180	printf "\n\n >>> INPUT-commands:\n"
	2181	fi
	2182	printf "\n ${in_command[$i]}"
	2183	done
	2184	(( i = 0 ))
	2185	while (( i < ioc ))
	2186	do
	2187	(( i = i + 1 ))
	2188	if (( i == 1 ))
	2189	then
	2190	printf "\n\n >>> OUTPUT-commands:\n"
	2191	fi
	2192	printf "\n ${out_command[$i]}"
	2193	done
	2194	fi
	2195
	2196
	2197	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2198	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2199	then
	2200	antwort=dummy
	2201	printf "\n\n"
	2202	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2203	do
	2204	printf " >>> everything o.k. (y/n) ? "
	2205	read antwort
	2206	done
	2207	if [[ $antwort = n \|\| $antwort = N ]]
	2208	then
	2209	locat=user_abort; (( iec = 0 )); exit
	2210	fi
	2211	if [[ $do_batch = true ]]
	2212	then
	2213	printf " >>> batch-job will be created and submitted"
	2214	else
	2215	if [[ $local_compile = false ]]
	2216	then
	2217	printf " >>> MRUN will now continue to execute on this machine"
	2218	else
	2219	printf " >>> a test compilation will now be carried out on this machine"
	2220	fi
	2221	fi
	2222	fi
	2223
	2224
	2225
	2226
	2227	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2228	# CHENDE AKTIONEN DURCHGEFUEHRT
	2229	if [[ $do_batch = false ]]
	2230	then
	2231
	2232
	2233	# TEMPORAEREN KATALOG ERZEUGEN
	2234	mkdir -p $TEMPDIR
	2235	chmod go+rx $TEMPDIR
	2236	tmpcreate=true
	2237
	2238
	2239	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2240	# TEMPORAERES VERZEICHNIS KOPIEREN
	2241	if [[ $do_compile = true ]]
	2242	then
	2243
	2244	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2245	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2246	if [[ $localhost = nech ]]
	2247	then
	2248	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2249	if mkdir -p $TEMPDIR_COMPILE
	2250	then
	2251	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2252	printf "\n is generated as temporary directory for cross compiling\n"
	2253	else
	2254	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2255	printf "\n needed for cross compilation failed"
	2256	locat=compile
	2257	exit
	2258	fi
	2259	else
	2260	TEMPDIR_COMPILE=$TEMPDIR
	2261	fi
	2262
	2263
[82]	2264	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2265	line=""
	2266	grep "%depository_path" $config_file > tmp_mrun
	2267	while read line
	2268	do
	2269	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2270	then
	2271	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2272	then
[82]	2273	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2274	fi
[82]	2275	fi
	2276	done < tmp_mrun
[1]	2277
[82]	2278	line=""
	2279	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2280	while read line
	2281	do
	2282	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2283	then
[211]	2284	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
	2285	then
	2286	local_depository_path=`echo $line \| cut -d" " -s -f2`
	2287	fi
[1]	2288	fi
[82]	2289	done < tmp_mrun
[1]	2290
[82]	2291	if [[ "$local_depository_path" = "" ]]
	2292	then
	2293	if [[ "$global_depository_path" != "" ]]
[1]	2294	then
[82]	2295	local_depository_path=$global_depository_path
[1]	2296	else
[82]	2297	printf "\n\n +++ no depository path found in configuration file"
	2298	printf "\n for local host \"$localhost\" "
	2299	printf "\n please set \"\%depository_path\" in configuration file\n"
	2300	locat=config_file; exit
[1]	2301	fi
[82]	2302	fi
	2303	eval local_depository_path=$local_depository_path
[215]	2304	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
	2305	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
[1]	2306
[215]	2307
[82]	2308	basename=`print $mainprog \| cut -f1 -d"."`
	2309	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2310	if [[ ! -f $make_depository ]]
	2311	then
	2312	printf "\n"
	2313	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2314	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2315	else
	2316	cp $make_depository $TEMPDIR_COMPILE
[1]	2317	cd $TEMPDIR_COMPILE
[82]	2318	tar -xf $make_depository > /dev/null 2>&1
[1]	2319	cd - > /dev/null
	2320	fi
[82]	2321
	2322	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2323
	2324	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2325	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2326	# MAKEFILE EINTRAGEN
[211]	2327	# cd $TEMPDIR_COMPILE
	2328	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2329	# if [[ "$interface_file" != "" ]]
	2330	# then
	2331	# interface_file=`echo $interface_file \| cut -d"." -f1`
	2332	# mv Makefile Makefile_old
	2333	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2334	# fi
	2335	# cd - > /dev/null
[1]	2336	else
	2337	cp $executable ${TEMPDIR}/a.out
	2338	fi
	2339
	2340
	2341	# WECHSEL IN TEMPORAEREN KATALOG
	2342	cd $TEMPDIR
	2343	printf "\n *** changed to temporary directory: $TEMPDIR"
	2344
	2345
	2346	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2347	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2348	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2349	# ERMITTELN
	2350	(( i = 0 ))
	2351	while (( i < iout ))
	2352	do
	2353	(( i = i + 1 ))
	2354	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2355	then
	2356	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2357	else
	2358	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2359	fi
	2360	done
	2361
	2362
	2363	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2364	if [[ $do_compile = true ]]
	2365	then
	2366
	2367
	2368	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2369	printf "\n\n\n *** compilation starts \n$striche\n"
	2370	printf " *** compilation with make using following options:\n"
[211]	2371	printf " make depository: $make_depository"
[82]	2372	printf " compilername: $compiler_name\n"
	2373	printf " options: $fopts\n"
	2374	printf " preprocessor-directives: $cpp_options \n"
	2375	printf " linker-options: $lopts \n"
	2376	printf " source code files: $source_list \n"
	2377
	2378	if [[ $localhost = nech ]]
[1]	2379	then
[82]	2380	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2381	cp $TEMPDIR_COMPILE/a.out .
	2382	[[ $? != 0 ]] && compile_error=true
	2383	rm -rf $TEMPDIR_COMPILE
[197]	2384	elif [[ $localhost = lcsgib ]]
	2385	then
[221]	2386	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
	2387	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
[197]	2388	[[ ! -f a.out ]] && compile_error=true
	2389	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
	2390	elif [[ $localhost = lcsgih ]]
	2391	then
[221]	2392	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
	2393	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
[197]	2394	[[ ! -f a.out ]] && compile_error=true
	2395	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
[1]	2396	else
[118]	2397	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2398	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2399	fi
[1]	2400
	2401	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2402	then
	2403	printf "\n +++ error occured while compiling or linking"
	2404	locat=compile
[181]	2405
[182]	2406	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[197]	2407	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2408	# then
[181]	2409	exit
[197]	2410	# else
	2411	# locat=normal
	2412	# fi
[1]	2413	else
	2414	printf "$striche\n *** compilation finished \n"
	2415	fi
	2416	fi
	2417
	2418
	2419	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2420	if [[ $local_compile = true ]]
	2421	then
	2422	cd $HOME
	2423	rm -rf $TEMPDIR
	2424	locat=local_compile; exit
	2425	fi
	2426
	2427
	2428	# BEREITSTELLEN DER INPUT-DATEIEN
	2429	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2430	(( i = 0 ))
	2431	while (( i < iin ))
	2432	do
	2433	(( i = i + 1 ))
	2434	if (( i == 1 ))
	2435	then
	2436	printf "\n\n *** providing INPUT-files:\n$striche"
	2437	fi
	2438
	2439
	2440	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2441	if [[ "${transin[$i]}" = unavailable ]]
	2442	then
	2443	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2444	then
	2445	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2446	printf "\n is not available!"
	2447	else
	2448	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2449	printf "\n is not available!"
	2450	fi
	2451	continue
	2452	fi
	2453
	2454	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2455	files_for_pes=false; datentyp=file
	2456	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2457	then
	2458	files_for_pes=true; datentyp=directory
	2459	actionin[$i]=""
	2460	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2461	then
	2462	actionin[$i]=""
	2463	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2464	then
	2465	files_for_pes=true; datentyp=directory
	2466	actionin[$i]="ar"
	2467	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2468	then
	2469	actionin[$i]="ar"
	2470	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2471	then
	2472	files_for_pes=true; datentyp=directory
	2473	actionin[$i]="fl"
	2474	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2475	then
	2476	actionin[$i]="fl"
	2477	fi
	2478
	2479	if [[ $files_for_pes = true ]]
	2480	then
	2481	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2482	else
	2483	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2484	fi
	2485
	2486	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2487	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2488	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2489	# SERVER ZU HOLEN
	2490	if [[ "${actionin[$i]}" = fl ]]
	2491	then
	2492	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2493	if [[ $files_for_pes = false ]]
	2494	then
	2495	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2496	then
	2497	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2498	got_tmp[$i]=true
	2499	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2500	then
	2501	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2502	printf "\n *** trying to use backup copy in \"$WORK\" "
	2503	cp $WORK/${frelin[$i]} ${localin[$i]}
	2504	else
	2505	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2506	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2507	printf "\n *** trying to get copy from archive"
	2508	actionin[$i]=ar
	2509	fi
	2510	else
	2511	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2512	then
	2513	mkdir ${localin[$i]}
[149]	2514	cd $tmp_data_catalog/${frelin[$i]}
	2515	for file in $(ls *)
	2516	do
	2517	ln $file $TEMPDIR/${localin[$i]}
	2518	done
	2519	cd $TEMPDIR
[1]	2520	got_tmp[$i]=true
	2521	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2522	then
	2523	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2524	printf "\n *** trying to use backup copy in \"$WORK\" "
	2525	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2526	else
	2527	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2528	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2529	printf "\n *** trying to get copy from archive"
	2530	actionin[$i]=ar
	2531	fi
	2532	fi
	2533	fi
	2534
	2535
	2536	# DATEI LIEGT AUF ARCHIV-SERVER
	2537	if [[ "${actionin[$i]}" = ar ]]
	2538	then
	2539
	2540	if [[ $files_for_pes = false ]]
	2541	then
	2542	printf "\n file will be restored from archive-system ($archive_system)!"
	2543	else
	2544	printf "\n directory will be restored from archive-system ($archive_system)!"
	2545	fi
	2546
	2547	file_restored=false
	2548
	2549	if [[ $archive_system = asterix ]]
	2550	then
	2551	do_stagein=true
	2552	(( stagein_anz = 0 ))
	2553	while [[ $do_stagein = true ]]
	2554	do
	2555	if [[ $files_for_pes = false ]]
	2556	then
	2557	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2558	else
	2559	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2560	fi
	2561	cat STAGEIN_OUTPUT
	2562	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2563	then
	2564	file_restored=true
	2565	do_stagein=false
	2566	else
	2567	(( stagein_anz = stagein_anz + 1 ))
	2568	if (( stagein_anz == 10 ))
	2569	then
	2570	printf "\n +++ stagein stoped after 10 tries"
	2571	locat=stage
	2572	exit
	2573	fi
	2574	printf "\n +++ restoring from archive failed, trying again:"
	2575	sleep 900
	2576	fi
	2577	done
	2578	elif [[ $archive_system = DMF ]]
	2579	then
	2580	if [[ $files_for_pes = false ]]
	2581	then
	2582	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2583	locat=DMF
	2584	exit
	2585	else
	2586	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2587	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2588	file_restored=true
	2589	fi
	2590	elif [[ $archive_system = tivoli ]]
	2591	then
	2592	if [[ $files_for_pes = false ]]
	2593	then
	2594	if [[ $localhost = ibmh ]]
	2595	then
	2596	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2597	else
	2598	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2599	fi
	2600	else
	2601	(( inode = 0 ))
	2602	while (( inode < nodes ))
	2603	do
	2604	if [[ $localhost = ibmh ]]
	2605	then
	2606	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2607	else
	2608	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2609	fi
	2610	(( inode = inode + 1 ))
	2611	done
	2612	fi
	2613	file_restored=true
	2614	elif [[ $archive_system = ut ]]
	2615	then
	2616	if [[ $files_for_pes = false ]]
	2617	then
	2618	cp $UT/${frelin[$i]} .
	2619	else
	2620	(( inode = 0 ))
	2621	while (( inode < nodes ))
	2622	do
	2623	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2624	(( inode = inode + 1 ))
	2625	done
	2626	fi
	2627	file_restored=true
	2628	else
	2629	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2630	locat=rearchive
	2631	exit
	2632	fi
	2633
	2634	if [[ $file_restored = true ]]
	2635	then
	2636
	2637	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2638	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2639	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2640	if [[ $files_for_pes = false ]]
	2641	then
	2642	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2643	else
	2644	mkdir $tmp_data_catalog/${frelin[$i]}
	2645	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2646	fi
	2647	got_tmp[$i]=true
	2648
	2649	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2650	mv ${frelin[$i]} ${localin[$i]}
	2651
	2652	fi
	2653	fi
	2654
	2655
	2656	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2657	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2658	then
	2659
	2660	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2661	then
	2662
	2663	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2664	printf "\n file will be provided for $numprocs processors"
	2665	mkdir ${localin[$i]}
	2666	ival=$numprocs
	2667	(( ii = 0 ))
	2668	while (( ii <= ival-1 ))
	2669	do
	2670	if (( ii < 10 ))
	2671	then
	2672	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2673	elif (( ii < 100 ))
	2674	then
	2675	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2676	elif (( ii < 1000 ))
	2677	then
	2678	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2679	else
	2680	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2681	fi
	2682	(( ii = ii + 1 ))
	2683	done
	2684
	2685	else
	2686
	2687	if [[ $files_for_pes = true ]]
	2688	then
	2689
	2690	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2691	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2692	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2693	# PER MOVE UMBENANNT WERDEN
	2694	printf "\n providing $numprocs files for the respective processors"
	2695	mkdir ${localin[$i]}
[183]	2696	if [[ $link_local_input = true ]]
	2697	then
	2698	printf " using ln -f\n"
	2699	cd ${absnamein[$i]}
	2700	for file in $(ls *)
	2701	do
	2702	ln -f $file ${localin[$i]}
	2703	done
	2704	cd $TEMPDIR
	2705	fi
	2706	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2707	if [[ ! -f "${localin[$i]}/_0000" ]]
	2708	then
	2709	if [[ $link_local_input = true ]]
	2710	then
	2711	printf " ln failed for .../_0000, using cp...\n"
	2712	fi
	2713	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2714	fi
[1]	2715
	2716	else
	2717	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2718	if [[ $link_local_input = true ]]
	2719	then
	2720	printf " using ln -f\n"
	2721	ln -f ${absnamein[$i]} ${localin[$i]}
	2722	fi
	2723	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2724	if [[ ! -f "${localin[$i]}" ]]
	2725	then
	2726	if [[ $link_local_input = true ]]
	2727	then
	2728	printf " ln failed, using cp...\n"
	2729	fi
	2730	cp ${absnamein[$i]} ${localin[$i]}
	2731	fi
[1]	2732	fi
	2733	fi
	2734	fi
	2735
	2736	done
	2737	if (( i != 0 ))
	2738	then
	2739	printf "\n$striche\n *** all INPUT-files provided \n"
	2740	fi
	2741
	2742
	2743	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2744	# LESEN VON PALM)
	2745	cat > ENVPAR << %%END%%
	2746	&envpar run_identifier = '$fname', host = '$localhost',
	2747	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2748	maximum_cpu_time_allowed = ${cpumax}.,
	2749	revision = '$global_revision' /
[1]	2750
	2751	%%END%%
	2752
	2753
	2754	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2755	(( i = 0 ))
	2756	while (( i < iic ))
	2757	do
	2758	(( i = i + 1 ))
	2759	if (( i == 1 ))
	2760	then
	2761	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2762	fi
	2763	printf "\n >>> ${in_command[$i]}"
	2764	eval ${in_command[$i]}
	2765	if (( i == iic ))
	2766	then
	2767	printf "\n$striche\n"
	2768	fi
	2769	done
	2770
	2771
	2772	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2773	cpurest=${cpumax}.
	2774
	2775
	2776	# PROGRAMMSTART
	2777	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2778	PATH=$PATH:$TEMPDIR
	2779
	2780	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2781	then
	2782	if [[ "$ENVIRONMENT" = BATCH ]]
	2783	then
[211]	2784	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
	2785	then
	2786	printf "\n +++ debug is allowed in interactive mode only"
	2787	locat=debug
	2788	exit
	2789	fi
[1]	2790	fi
[5]	2791	if [[ $localhost = decalpha ]]
[1]	2792	then
	2793	dxladebug a.out
	2794	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2795	then
	2796
	2797	# SETUP THE IBM MPI ENVIRONMENT
	2798	export MP_SHARED_MEMORY=yes
	2799	export AIXTHREADS_SCOPE=S
	2800	export OMP_NUM_THREADS=$threads_per_task
	2801	export AUTHSTATE=files
	2802	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2803
	2804	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2805	export MP_ADAPTER_USE=shared
	2806	export MP_CPU_USE=multiple
	2807	export MP_TIMEOUT=1200
	2808
	2809	unset MP_TASK_AFFINITY
	2810
	2811	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2812	#(( ii = 1 ))
	2813	#while (( ii <= $numprocs ))
	2814	#do
	2815	# echo $localhost_realname >> hostfile
	2816	# (( ii = ii + 1 ))
	2817	#done
	2818	#export MP_HOSTFILE=hostfile
	2819
	2820	if [[ "$LOADLBATCH" = yes ]]
	2821	then
	2822	totalview poe a.out $ROPTS
	2823	else
	2824	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2825	export TVDSVRLAUNCHCMD=ssh
	2826	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2827	fi
[211]	2828	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
	2829	then
	2830	# CURRENTLY NO DEBUGGER ON LCSGI
	2831	if [[ $run_coupled_model = true ]]
	2832	then
	2833	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
	2834	locat=debug
	2835	exit
[223]	2836	else
	2837	echo "no_coupling" > runfile_atmos
[211]	2838	fi
	2839	(( ii = $numprocs / $threads_per_task ))
	2840	export OMP_NUM_THREADS=$threads_per_task
	2841	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
	2842	if [[ $threads_per_task != 1 ]]
	2843	then
	2844	printf "\n threads per task: $threads_per_task"
	2845	fi
	2846	printf "\n\n"
[223]	2847	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	2848	then
	2849	# export MPI_LAUNCH_TIMEOUT=360
	2850	if [[ "$totalview" = true ]]
	2851	then
	2852	printf "\n running totalview debugger"
	2853	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
	2854	else
	2855	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	2856	fi
	2857	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	2858	then
	2859	# ulimit -s 300000 # A too large stack size causes problems
	2860	# export MV2_NUM_PORTS=2
	2861	# export MV2_CPU_MAPPING=0:1:2:3
	2862	mpiexec ./a.out $ROPTS < runfile_atmos
	2863	fi
[1]	2864	else
	2865	printf "\n +++ no debug available on \"$localhost\" "
	2866	printf "\n or not implemented in mrun so far"
	2867	locat=debug
	2868	exit
	2869	fi
	2870	else
	2871	if [[ -n $numprocs ]]
	2872	then
	2873
	2874	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2875	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2876	then
	2877	# SETUP THE IBM MPI ENVIRONMENT
	2878	export MP_SHARED_MEMORY=yes
	2879	export AIXTHREAD_SCOPE=S
	2880	export OMP_NUM_THREADS=$threads_per_task
	2881	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2882	export AUTHSTATE=files
	2883	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2884	# export MP_PRINTENV=yes
	2885
	2886	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2887	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2888	export MP_WAIT_MODE=poll
	2889	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2890	# export MP_EAGER_LIMIT=65535
	2891
	2892	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2893	# export MPJ_MTAB=128
	2894	# export MPJ_ALLTOALL=1
	2895	# export MPJ_ALLTOALLV=1
	2896
	2897	if [[ "$LOADLBATCH" = yes ]]
	2898	then
	2899	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2900	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2901	then
[102]	2902	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2903	else
[102]	2904	poe ./a.out $ROPTS
[1]	2905	fi
	2906	else
	2907	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2908	then
[102]	2909	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2910	elif [[ $localhost = ibmy ]]
	2911	then
	2912	if [[ -f $hostfile ]]
	2913	then
	2914	cp $hostfile hostfile
	2915	else
	2916	(( ii = 1 ))
	2917	while (( ii <= $numprocs ))
	2918	do
	2919	echo $localhost_realname >> hostfile
	2920	(( ii = ii + 1 ))
	2921	done
	2922	fi
	2923	export MP_HOSTFILE=hostfile
[102]	2924	./a.out -procs $tasks_per_node $ROPTS
[1]	2925	else
	2926	if [[ "$host_file" = "" ]]
	2927	then
	2928	printf "\n +++ no hostfile given in configuration file"
	2929	locat=config_file
	2930	exit
	2931	else
	2932	eval host_file=$host_file
	2933	fi
	2934	export MP_HOSTFILE=$host_file
[102]	2935	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2936	fi
	2937	fi
	2938	elif [[ $host = nech \|\| $host = neck ]]
	2939	then
	2940	(( ii = nodes ))
	2941	if [[ $ii = 1 ]]
	2942	then
	2943	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2944	export MPIPROGINF=YES
[61]	2945	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2946	echo "*** execution on single node with mpirun"
[102]	2947	mpirun -np $numprocs ./a.out $ROPTS
[1]	2948	else
	2949	(( i = 0 ))
	2950	while (( i < ii ))
	2951	do
	2952	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2953	(( i = i + 1 ))
	2954	done
	2955
	2956	echo "#!/bin/sh" > mpi_exec_shell
	2957	echo " " >> mpi_exec_shell
	2958	echo "set -u" >> mpi_exec_shell
	2959	echo "F_ERRCNT=0" >> mpi_exec_shell
	2960	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2961	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2962	echo "cpurest=$cpurest" >> mpi_exec_shell
	2963	echo "fname=$fname" >> mpi_exec_shell
	2964	echo "localhost=$localhost" >> mpi_exec_shell
	2965	echo "return_addres=$return_addres" >> mpi_exec_shell
	2966	echo "return_username=$return_username" >> mpi_exec_shell
	2967	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2968	echo "write_binary=$write_binary" >> mpi_exec_shell
	2969	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2970	echo " " >> mpi_exec_shell
	2971	echo "export F_ERRCNT" >> mpi_exec_shell
	2972	echo "export MPIPROGINV" >> mpi_exec_shell
	2973	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2974	echo "export cpurest" >> mpi_exec_shell
	2975	echo "export fname" >> mpi_exec_shell
	2976	echo "export localhost" >> mpi_exec_shell
	2977	echo "export return_addres" >> mpi_exec_shell
	2978	echo "export return_username" >> mpi_exec_shell
	2979	echo "export tasks_per_node" >> mpi_exec_shell
	2980	echo "export write_binary" >> mpi_exec_shell
	2981	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2982	echo " " >> mpi_exec_shell
[102]	2983	echo "exec ./a.out" >> mpi_exec_shell
[1]	2984
	2985	chmod u+x mpi_exec_shell
	2986	export MPIPROGINF=YES
	2987	mpirun -f multinode_config &
	2988	wait
	2989
	2990	fi
[82]	2991	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2992	then
	2993
	2994	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2995	# DOES NOT EXIST
[179]	2996	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2997	then
[179]	2998	if [[ -f $hostfile ]]
	2999	then
	3000	cp $hostfile hostfile
	3001	else
	3002	(( ii = 1 ))
	3003	while (( ii <= $numprocs / $threads_per_task ))
	3004	do
	3005	echo $localhost_realname >> hostfile
	3006	(( ii = ii + 1 ))
	3007	done
	3008	fi
	3009	eval zeile=\"`head -n $ii hostfile`\"
	3010	printf "\n *** running on: $zeile"
[1]	3011	fi
[179]	3012
[1]	3013	(( ii = $numprocs / $threads_per_task ))
	3014	export OMP_NUM_THREADS=$threads_per_task
[246]	3015	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	3016	if [[ $threads_per_task != 1 ]]
	3017	then
	3018	printf "\n threads per task: $threads_per_task"
	3019	fi
[102]	3020	if [[ $run_coupled_model = false ]]
[1]	3021	then
[223]	3022	echo "no_coupling" > runfile_atmos
[102]	3023	printf "\n\n"
[179]	3024	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	3025	then
[221]	3026	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3027	then
	3028	# export MPI_LAUNCH_TIMEOUT=360
[223]	3029	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
[221]	3030	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3031	then
	3032	# ulimit -s 300000 # A too large stack size causes problems
	3033	# export MV2_NUM_PORTS=2
	3034	# export MV2_CPU_MAPPING=0:1:2:3
[223]	3035	mpiexec ./a.out $ROPTS < runfile_atmos
[221]	3036	fi
[179]	3037	elif [[ $host = lcxt4 ]]
	3038	then
[223]	3039	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
[164]	3040	else
[223]	3041	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	3042	fi
[1]	3043	else
[164]	3044
[206]	3045	# currently there is no full MPI-2 support on ICE and XT4
	3046	(( iia = $numprocs_atmos / $threads_per_task ))
	3047	(( iio = $numprocs_ocean / $threads_per_task ))
	3048	printf "\n coupled run ($iia atmosphere, $iio ocean)"
	3049	printf "\n using $coupled_mode coupling"
[102]	3050	printf "\n\n"
[164]	3051
[206]	3052	if [[ $coupled_mode = "mpi2" ]]
[164]	3053	then
[206]	3054	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
	3055	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
	3056	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3057	then
[197]	3058
[221]	3059	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3060	then
	3061	# export MPI_LAUNCH_TIMEOUT=360
	3062	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
	3063	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
	3064	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3065	then
	3066	# ulimit -s 300000 # A too large stack size causes problems
	3067	# export MV2_NUM_PORTS=2
	3068	# export MV2_CPU_MAPPING=0:1:2:3
	3069	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
	3070	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
	3071	fi
[197]	3072
[206]	3073	elif [[ $host = lcxt4 ]]
	3074	then
[197]	3075
[206]	3076	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	3077	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	3078
	3079	else
	3080	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	3081	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
	3082	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
	3083	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	3084	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	3085	fi
	3086	wait
	3087
[164]	3088	else
	3089
[206]	3090	echo "coupled_run $iia $iio" > runfile_atmos
	3091	if [[ $host = lcsgih \|\| $host = lcsgib ]]
	3092	then
	3093
[221]	3094	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
	3095	then
	3096	# export MPI_LAUNCH_TIMEOUT=360
	3097	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
	3098	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
	3099	then
	3100	# ulimit -s 300000 # A too large stack size causes problems
	3101	# export MV2_NUM_PORTS=2
	3102	# export MV2_CPU_MAPPING=0:1:2:3
	3103	mpiexec ./a.out $ROPTS < runfile_atmos
	3104	fi
[206]	3105
	3106	elif [[ $host = lcxt4 ]]
	3107	then
	3108
	3109	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
	3110
	3111	fi
	3112	wait
[164]	3113	fi
[102]	3114
	3115	# if [[ $scirocco = true ]]
	3116	# then
	3117	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	3118	# else
	3119	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	3120	# fi
[206]	3121	fi
[1]	3122	elif [[ $host = decalpha ]]
	3123	then
[102]	3124	dmpirun -np $numprocs a.out $ROPTS
[1]	3125	elif [[ $host = lctit ]]
	3126	then
	3127	export runfile=runfile.$kennung
	3128
	3129	echo "cd $PWD" > $runfile
	3130	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	3131	echo "export cpurest=$cpurest" >> $runfile
	3132	echo "export fname=$fname" >> $runfile
	3133	echo "export localhost=$localhost" >> $runfile
	3134	echo "export return_addres=$return_addres" >> $runfile
	3135	echo "export return_username=$return_username" >> $runfile
	3136	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	3137	echo "export write_binary=$write_binary" >> $runfile
	3138	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	3139	echo "./a.out" >> $runfile
	3140	chmod u+x $runfile
	3141
	3142	if [[ "$QUEUE" = interactive ]]
	3143	then
[102]	3144	mpirun -np $numprocs a.out $ROPTS
[1]	3145	else
[127]	3146	(( mem_tsubame = $memory / 1024.0 ))
	3147	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	3148	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	3149	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	3150	fi
	3151
	3152	rm $runfile
	3153	else
[102]	3154	mpprun -n $numprocs a.out $ROPTS
[1]	3155	fi
	3156	[[ $? != 0 ]] && execution_error=true
	3157
	3158
	3159	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	3160	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	3161	then
	3162	apprentice
	3163	fi
	3164	else
[102]	3165	a.out $ROPTS
[1]	3166	fi
	3167	fi
	3168	if [[ $? != 0 \|\| $execution_error = true ]]
	3169	then
	3170
	3171	# ABBRUCH BEI LAUFZEITFEHLER
[102]	3172	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3173	printf "\n +++ runtime error occured"
	3174	locat=execution
	3175	exit
	3176	else
[102]	3177	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	3178	printf "\n$striche\n *** execution finished \n"
	3179	fi
	3180
	3181
	3182
	3183	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	3184	(( i = 0 ))
	3185	while (( i < ioc ))
	3186	do
	3187	(( i = i + 1 ))
	3188	if (( i == 1 ))
	3189	then
	3190	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	3191	fi
	3192	printf "\n >>> ${out_command[$i]}"
	3193	eval ${out_command[$i]}
	3194	if (( i == ioc ))
	3195	then
	3196	printf "\n$striche\n"
	3197	fi
	3198	done
	3199
	3200
	3201	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	3202	if [[ $do_trace = true ]]
	3203	then
	3204	printf "\n\n"
	3205	ls -al
	3206	fi
	3207
	3208
	3209
	3210	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	3211	(( i = 0 ))
	3212	while (( i < iout ))
	3213	do
	3214	(( i = i + 1 ))
	3215	if (( i == 1 ))
	3216	then
	3217	printf "\n\n *** saving OUTPUT-files:\n$striche"
	3218	fi
	3219
	3220	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	3221	files_for_pes=false; filetyp=file
	3222	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	3223	then
	3224	files_for_pes=true; filetyp=directory
	3225	actionout[$i]=""
	3226	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	3227	then
	3228	actionout[$i]=""
	3229	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	3230	then
	3231	files_for_pes=true; filetyp=directory
	3232	actionout[$i]="ar"
	3233	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	3234	then
	3235	actionout[$i]="ar"
	3236	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	3237	then
	3238	files_for_pes=true; filetyp=directory
	3239	actionout[$i]="fl"
	3240	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3241	then
	3242	actionout[$i]="fl"
	3243	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3244	then
	3245	files_for_pes=true; filetyp=directory
	3246	actionout[$i]="tr"
	3247	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3248	then
	3249	actionout[$i]="tr"
	3250	fi
	3251
	3252	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3253	then
	3254	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3255	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3256	then
	3257	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3258	else
	3259
	3260
	3261	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3262	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3263	# REMOTE-RECHNUNGEN
	3264	if [[ "${actionout[$i]}" = tr ]]
	3265	then
	3266	if [[ $localhost != $fromhost ]]
	3267	then
	3268	if [[ $files_for_pes = false ]]
	3269	then
	3270	cps=""
	3271	cst=""
	3272	else
	3273	cps=-c
	3274	cst="/"
	3275	fi
	3276	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3277	then
	3278
	3279	# TRANSFER IN EIGENSTAENDIGEM JOB
	3280	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3281	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3282	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3283	if [[ $files_for_pes = false ]]
	3284	then
	3285	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3286	else
	3287	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3288	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3289	fi
	3290
	3291	echo "set -x" > transfer_${localout[$i]}
	3292	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3293
	3294	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3295	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3296	printf "\n or higher cycle\n"
	3297	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3298
[1]	3299	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3300
	3301	if [[ $localhost = nech ]]
	3302	then
[82]	3303	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3304	else
	3305	if [[ "$LOGNAME" = b323013 ]]
	3306	then
[164]	3307	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3308	else
[164]	3309	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3310	fi
	3311	fi
	3312
	3313	else
	3314
	3315	# TRANSFER INNERHALB DIESES JOBS
	3316	transfer_failed=false
[82]	3317	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3318	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3319	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3320	[[ $? != 0 ]] && transfer_failed=true
[1]	3321
	3322	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3323	# LOKALER MASCHINE ANLEGEN
	3324	if [[ $transfer_failed = true ]]
	3325	then
	3326	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3327	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3328
	3329	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3330	# ANLEGEN.
	3331	eval local_catalog=${pathout[$i]}
	3332	if [[ ! -d $local_catalog ]]
	3333	then
	3334	printf " *** local directory does not exist. Trying to create:\n"
	3335	printf " $local_catalog \n"
	3336	mkdir -p $local_catalog
	3337	fi
	3338	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3339	transfer_problems=true
	3340	fi
	3341	fi
	3342	else
	3343
	3344	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3345	actionout[$i]=""
	3346	fi
	3347	fi
	3348
	3349
	3350	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3351	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3352	# REMOTE-RECHNUNGEN
	3353	if [[ "${actionout[$i]}" = tra ]]
	3354	then
	3355	if [[ $localhost != $fromhost ]]
	3356	then
	3357	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3358	then
	3359
	3360	# TRANSFER IN EIGENSTAENDIGEM JOB
	3361	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3362	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3363	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3364	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3365
	3366	echo "set -x" > transfer_${localout[$i]}
	3367	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3368
	3369	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3370	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3371	printf "\n or higher cycle\n"
	3372	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3373
[1]	3374	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3375
	3376	if [[ $localhost = nech ]]
	3377	then
[82]	3378	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3379	else
	3380	if [[ $LOGNAME = b323013 ]]
	3381	then
[164]	3382	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3383	else
[164]	3384	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3385	fi
	3386	fi
	3387
	3388	else
	3389
	3390	# TRANSFER INNERHALB DIESES JOBS
	3391	transfer_failed=false
[82]	3392	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3393	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3394	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3395	[[ $? != 0 ]] && transfer_failed=true
[1]	3396
	3397	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3398	# LOKALER MASCHINE ANLEGEN
	3399	if [[ $transfer_failed = true ]]
	3400	then
	3401	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3402	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3403
	3404	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3405	# ANLEGEN
	3406	eval local_catalog=${pathout[$i]}
	3407	if [[ ! -d $local_catalog ]]
	3408	then
	3409	printf " *** local directory does not exist. Trying to create:\n"
	3410	printf " $local_catalog \n"
	3411	mkdir -p $local_catalog
	3412	fi
	3413
	3414	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3415	transfer_problems=true
	3416	fi
	3417	fi
	3418	else
	3419
	3420	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3421	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3422	actionout[$i]=a
	3423	fi
	3424	fi
	3425
	3426
	3427	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3428	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3429	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3430	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3431	if [[ "${actionout[$i]}" = fl ]]
	3432	then
	3433	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3434	chmod g+rx $tmp_data_catalog
	3435	if [[ $files_for_pes = false ]]
	3436	then
	3437	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3438	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3439	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3440	else
	3441	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3442	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3443	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3444	cd ${localout[$i]}
	3445	for file in $(ls *)
	3446	do
	3447	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3448	done
	3449	cd $TEMPDIR
[1]	3450	fi
	3451
	3452
	3453	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3454	if [[ $store_on_archive_system = true ]]
	3455	then
	3456
	3457	if [[ $archive_system = asterix ]]
	3458	then
	3459	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3460	if [[ $files_for_pes = false ]]
	3461	then
	3462	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3463	else
	3464	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3465	fi
	3466	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3467	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3468	echo "then" >> archive_${frelout[$i]}
	3469	echo " do_stageout=false" >> archive_${frelout[$i]}
	3470	echo "else" >> archive_${frelout[$i]}
	3471	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3472	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3473	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3474	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3475	if [[ $files_for_pes = false ]]
	3476	then
	3477	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3478	else
	3479	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3480	fi
	3481	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3482	echo "fi" >> archive_${frelout[$i]}
	3483	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3484	elif [[ $archive_system = DMF ]]
	3485	then
	3486	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3487	if [[ $files_for_pes = false ]]
	3488	then
	3489	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3490	locat=DMF
	3491	exit
	3492	else
	3493	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3494	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3495	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3496	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3497	fi
	3498	elif [[ $archive_system = tivoli ]]
	3499	then
	3500	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3501	if [[ $files_for_pes = false ]]
	3502	then
	3503	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3504	echo "set -x" >> archive_${frelout[$i]}
	3505	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3506	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3507	else
	3508
	3509	echo "set -x" >> archive_${frelout[$i]}
	3510	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3511	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3512	cd $tmp_data_catalog
	3513	all_files=`ls -1 ${frelout[$i]}/*`
	3514	cd - > /dev/null
	3515	(( inode = 0 ))
	3516	(( tp1 = tasks_per_node + 1 ))
	3517	while (( inode < nodes ))
	3518	do
	3519	# echo "*** all_files = \"$all_files\" "
	3520	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3521	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3522	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3523	# echo "*** files = \"$files\" "
	3524	# echo "*** all_files = \"$all_files\" "
	3525	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3526	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3527	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3528	(( inode = inode + 1 ))
	3529	done
	3530	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3531	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3532	fi
	3533	elif [[ $archive_system = ut ]]
	3534	then
	3535	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3536	if [[ $files_for_pes = false ]]
	3537	then
	3538	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3539	echo "set -x" >> archive_${frelout[$i]}
	3540	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3541	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3542	else
	3543
	3544	echo "set -x" >> archive_${frelout[$i]}
	3545	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3546	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3547	cd $tmp_data_catalog
	3548	all_files=`ls -1 ${frelout[$i]}/*`
	3549	cd - > /dev/null
	3550	(( inode = 0 ))
	3551	(( tp1 = tasks_per_node + 1 ))
	3552	while (( inode < nodes ))
	3553	do
	3554	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3555	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3556	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3557	(( inode = inode + 1 ))
	3558	done
	3559	fi
	3560	elif [[ $archive_system = none ]]
	3561	then
	3562	printf " +++ archiving on $localhost not available!\n"
	3563	fi
	3564
	3565	if [[ $archive_system != none ]]
	3566	then
	3567	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3568	then
[164]	3569	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3570	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3571	elif [[ $localhost = nech ]]
	3572	then
[82]	3573	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3574	fi
	3575	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3576	fi
	3577	else
	3578	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3579	fi
	3580
	3581
	3582	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3583	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3584	if [[ $files_for_pes = false ]]
	3585	then
	3586	cat /dev/null > ${pathout[$i]}
	3587	else
	3588	mkdir -p ${pathout[$i]}
	3589	fi
	3590
	3591	fi
	3592
	3593
	3594	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3595	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3596	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3597	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3598	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3599	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3600	if [[ "${actionout[$i]}" = ar ]]
	3601	then
	3602	if [[ $files_for_pes = false ]]
	3603	then
	3604	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3605	printf "\n ${pathout[$i]}"
	3606	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3607	else
	3608	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3609	printf "\n ${pathout[$i]}"
	3610	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3611	fi
	3612	mv ${localout[$i]} ${frelout[$i]}
	3613
	3614	file_saved=false
	3615
	3616	if [[ $archive_system = asterix ]]
	3617	then
	3618	do_stageout=true
	3619	(( stageout_anz = 0 ))
	3620	while [[ $do_stageout = true ]]
	3621	do
	3622	if [[ $files_for_pes = false ]]
	3623	then
	3624	stageout ${frelout[$i]} > STAGE_OUTPUT
	3625	else
	3626	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3627	fi
	3628	cat STAGE_OUTPUT
	3629	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3630	then
	3631	file_saved=true
	3632	do_stageout=false
	3633	else
	3634	if [[ $files_for_pes = false ]]
	3635	then
	3636	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3637	else
	3638	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3639	fi
	3640	(( stageout_anz = stageout_anz + 1 ))
	3641	if (( stageout_anz == 10 ))
	3642	then
	3643	printf "\n +++ stoped after 10 unsuccessful tries!"
	3644	archive_save=false
	3645	do_stageout=false
	3646	else
	3647	printf "\n *** new try to store on archive after 15 min:"
	3648	sleep 900
	3649	fi
	3650	fi
	3651	done
	3652	elif [[ $archive_system = DMF ]]
	3653	then
	3654	if [[ $files_for_pes = false ]]
	3655	then
	3656	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3657	locat=DMF
	3658	exit
	3659	else
	3660	rm -rf $ARCHIVE/${frelout[$i]}
	3661	cp -r ${frelout[$i]} $ARCHIVE
	3662	fi
	3663	file_saved=true
	3664	elif [[ $archive_system = tivoli ]]
	3665	then
	3666	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3667	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3668	# GELEGT WERDEN
	3669	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3670	chmod g+rx $tmp_data_catalog
	3671	if [[ $files_for_pes = false ]]
	3672	then
	3673	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3674	else
	3675	mkdir $tmp_data_catalog/${frelout[$i]}
	3676	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3677	fi
	3678
	3679	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3680	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3681	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3682	if [[ $files_for_pes = false ]]
	3683	then
	3684	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3685	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3686	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3687	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3688	else
	3689	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3690	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3691	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3692	fi
	3693
[164]	3694	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3695	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3696	file_saved=true
	3697
	3698	elif [[ $archive_system = ut ]]
	3699	then
	3700	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3701	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3702	# GELEGT WERDEN
	3703	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3704	chmod g+rx $tmp_data_catalog
	3705	if [[ $files_for_pes = false ]]
	3706	then
	3707	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3708	else
	3709	mkdir $tmp_data_catalog/${frelout[$i]}
	3710	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3711	fi
	3712
	3713	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3714	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3715	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3716	if [[ $files_for_pes = false ]]
	3717	then
	3718	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3719	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3720	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3721	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3722	else
	3723	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3724	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3725	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3726	fi
	3727
[82]	3728	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3729	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3730	file_saved=true
	3731
	3732	else
	3733	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3734	archive_save=false
	3735	fi
	3736	if [[ $file_saved = true ]]
	3737	then
	3738	if [[ $files_for_pes = false ]]
	3739	then
	3740	cat /dev/null > ${pathout[$i]}
	3741	else
	3742	mkdir -p ${pathout[$i]}
	3743	fi
	3744	fi
	3745	fi
	3746
	3747	# APPEND AUF LOKALER MASCHINE
	3748	if [[ "${actionout[$i]}" = "a" ]]
	3749	then
	3750	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3751	cat ${localout[$i]} >> ${pathout[$i]}
	3752	fi
	3753
	3754	# KOPIEREN AUF LOKALER MASCHINE
	3755	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3756	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3757	then
	3758
	3759	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3760	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3761	then
	3762	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3763	if [[ $link_local_output = true ]]
	3764	then
	3765	printf " using ln -f\n"
	3766	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3767	fi
	3768	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3769	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3770	then
	3771	if [[ $link_local_output = true ]]
	3772	then
	3773	printf " ln failed, using cp...\n"
	3774	fi
	3775	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3776	fi
[1]	3777	else
	3778	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3779	if [[ $link_local_output = true ]]
	3780	then
	3781	printf " using ln -f\n"
	3782	ln -f ${localout[$i]} ${pathout[$i]}
	3783	fi
	3784	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3785	if [[ ! -f "${pathout[$i]}" ]]
	3786	then
	3787	if [[ $link_local_output = true ]]
	3788	then
	3789	printf " ln failed, using cp...\n"
	3790	fi
	3791	cp ${localout[$i]} ${pathout[$i]}
	3792	fi
[1]	3793	fi
	3794
	3795	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3796	then
	3797
	3798	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3799	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3800	# WIRD DANN KOPIERT
	3801	# PER MOVE UMBENANNT WERDEN
	3802	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3803	if [[ $link_local_output = true ]]
	3804	then
	3805	printf " using ln -f\n"
	3806	mkdir ${pathout[$i]}
	3807	cd ${localout[$i]}
	3808	for file in $(ls *)
	3809	do
	3810	ln -f $file ${pathout[$i]}
	3811	done
	3812	cd $TEMPDIR
	3813	fi
	3814	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3815	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3816	then
	3817	if [[ $link_local_output = true ]]
	3818	then
	3819	printf " ln failed for .../_0000, using cp...\n"
	3820	fi
	3821	cp -r ${localout[$i]} ${pathout[$i]}
	3822	fi
[1]	3823
	3824	fi
	3825	fi
	3826	done
	3827	if (( i != 0 ))
	3828	then
	3829	if [[ $transfer_problems = true ]]
	3830	then
	3831	printf "\n$striche\n *** OUTPUT-files saved"
	3832	printf "\n +++ WARNING: some data transfers failed! \n"
	3833	else
	3834	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3835	fi
	3836	fi
	3837
	3838
	3839	# EVENTUELL FOLGEJOB STARTEN
	3840	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3841	if [[ -f CONTINUE_RUN ]]
	3842	then
	3843
	3844	if [[ $archive_save = true ]]
	3845	then
	3846
	3847	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3848	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3849	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3850	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3851	# HANDEN
	3852	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3853	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3854	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3855	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3856	then
	3857	mc=`echo $mc \| sed 's/#/f/g'`
	3858	fi
	3859
	3860
	3861	# JOB STARTEN
	3862	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3863	echo " $mc"
	3864	printf "\n$striche\n"
	3865	if [[ $localhost != $fromhost ]]
	3866	then
	3867
[204]	3868	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
[1]	3869	then
	3870	echo "*** ssh will be used to initiate restart-runs!"
	3871	echo " return_addres=\"$return_addres\" "
	3872	echo " return_username=\"$return_username\" "
	3873	if [[ $return_addres = 172.20.25.41 ]]
	3874	then
	3875	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3876	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3877	else
[33]	3878	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3879	fi
	3880	else
	3881	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3882	locat=restart; exit
	3883	fi
	3884
	3885	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3886	# DER AKTUELLE JOB ENDET
	3887	sleep 30
	3888
	3889	else
	3890
	3891	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3892	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3893	cd $LOCAL_PWD
[108]	3894	if [[ $localhost = lcfimm ]]
	3895	then
	3896	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3897	else
	3898	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3899	fi
[1]	3900	cd - > /dev/null
	3901	fi
	3902	printf "\n$striche\n *** restart-run initiated \n"
	3903
	3904
	3905	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3906	# GEHOLT WORDEN SIND, LOESCHEN
	3907	(( i = 0 ))
	3908	while (( i < iin ))
	3909	do
	3910	(( i = i + 1 ))
	3911	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3912	then
	3913	rm -r $tmp_data_catalog/${frelin[$i]}
	3914	fi
	3915	done
	3916
	3917	else
	3918
	3919	printf "\n +++ no restart-run possible, since errors occured"
	3920	printf "\n during the archive process"
	3921	fi
	3922
	3923	fi
	3924
	3925
	3926
	3927	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3928	if [[ "$email_notification" != "" ]]
	3929	then
	3930
	3931	if [[ $localhost != $fromhost ]]
	3932	then
	3933	if [[ -f CONTINUE_RUN ]]
	3934	then
	3935	echo "PALM restart run necessary" > email_text
	3936	echo "description header of actual run:" >> email_text
	3937	cat CONTINUE_RUN >> email_text
	3938	echo "mrun-command to restart:" >> email_text
	3939	echo "$mc" >> email_text
	3940	else
	3941	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3942	fi
	3943	mail $email_notification < email_text
	3944	printf "\n *** email notification sent to \"$email_notification\" "
	3945	fi
	3946	fi
	3947
	3948
	3949
	3950	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3951	cd $HOME
	3952	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3953
	3954	else
	3955
	3956
	3957	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3958	# CHENDE AKTIONEN DURCHGEFUEHRT
	3959
	3960	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3961	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3962	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3963	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3964	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3965	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3966	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3967	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3968	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3969	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3970	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3971	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3972	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3973	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3974	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3975	if [[ $use_openmp = true ]]
	3976	then
	3977	mrun_com=${mrun_com}" -O"
	3978	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3979	else
	3980	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3981	fi
	3982	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3983	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3984	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3985	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3986	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[206]	3987	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
[1]	3988	if [[ $do_remote = true ]]
	3989	then
	3990	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3991	fi
	3992
	3993
	3994	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3995	jobfile=jobfile.$RANDOM
	3996
	3997
	3998	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3999	echo "mkdir $TEMPDIR" >> $jobfile
	4000	echo "cd $TEMPDIR" >> $jobfile
	4001
	4002
	4003	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	4004	if [[ $do_trace = true ]]
	4005	then
	4006	echo "set -x" >> $jobfile
	4007	else
	4008	echo "set +vx" >> $jobfile
	4009	fi
	4010
	4011
[191]	4012	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	4013	# DATEI FUER DEN JOB
	4014	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	4015	then
	4016
[191]	4017	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	4018	# KOPIEREN
	4019	if [[ $restart_run != true ]]
	4020	then
	4021	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	4022	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	4023	fi
[1]	4024
[191]	4025	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	4026	echo "set -x" >> $jobfile
	4027	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	4028	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	4029
[193]	4030	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	4031	# ARBEITSVERZEICHNIS VERSCHIEBEN
	4032	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	4033	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	4034	echo "execute_mrun=true" >> $jobfile
	4035	echo " " >> $jobfile
	4036
[191]	4037	else
	4038
	4039	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	4040	# SOWIE GEGEBENENFALLS DES MAKEFILES
	4041	if [[ $do_compile = true ]]
	4042	then
	4043
	4044	source_catalog=SOURCES_FOR_RUN_$fname
	4045
	4046	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	4047	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	4048	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	4049	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	4050	echo "export SOURCES_COMPLETE=true" >> $jobfile
	4051	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	4052
	4053	for filename in $source_list
	4054	do
	4055	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4056	echo "cat > $filename << \"%END%\"" >> $jobfile
	4057	cat $source_catalog/$filename >> $jobfile
	4058	echo " " >> $jobfile
	4059	echo "%END%" >> $jobfile
	4060	echo " " >> $jobfile
	4061	done
	4062
[1]	4063	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	4064	echo "cat > Makefile << \"%END%\"" >> $jobfile
	4065	cat $source_catalog/Makefile >> $jobfile
[1]	4066	echo " " >> $jobfile
	4067	echo "%END%" >> $jobfile
	4068	echo " " >> $jobfile
	4069
[191]	4070	echo "cd - > /dev/null" >> $jobfile
[1]	4071
[191]	4072	fi
[1]	4073
	4074
[191]	4075	# ABSPEICHERN DER KONFIGURATIONSDATEI
	4076	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4077	echo "cat > $config_file << \"%END%\"" >> $jobfile
	4078	cat $config_file >> $jobfile
	4079	echo "%END%" >> $jobfile
	4080	echo " " >> $jobfile
[1]	4081
	4082
[191]	4083	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	4084	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	4085	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	4086	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	4087	echo "%END%" >> $jobfile
	4088	if [[ $host = lctit ]]
	4089	then
	4090	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	4091	echo "mv mrun_new $mrun_script_name" >> $jobfile
	4092	fi
	4093	echo "chmod u+x $mrun_script_name" >> $jobfile
	4094	echo "execute_mrun=true" >> $jobfile
	4095	echo " " >> $jobfile
[1]	4096
	4097	fi
	4098
[191]	4099
[1]	4100	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	4101	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	4102	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	4103	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	4104	if [[ $do_remote = true ]]
	4105	then
	4106	(( i = 0 ))
	4107	while (( i < iin ))
	4108	do
	4109	(( i = i + 1 ))
	4110	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	4111	if [[ "${transin[$i]}" = job ]]
	4112	then
	4113	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	4114	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	4115	echo " " >> $jobfile
	4116	echo "%END%" >> $jobfile
	4117	else
[82]	4118	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	4119	fi
	4120
	4121	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	4122	echo "if [[ \$? = 1 ]]" >> $jobfile
	4123	echo "then" >> $jobfile
	4124	echo " echo \" \" " >> $jobfile
	4125	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	4126	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	4127	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	4128	echo " execute_mrun=false" >> $jobfile
	4129	echo "fi" >> $jobfile
	4130	done
	4131	fi
	4132
	4133	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	4134	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	4135	echo "LOCAL_PWD=$working_directory" >> $jobfile
	4136	echo "export LOCAL_PWD" >> $jobfile
	4137
	4138	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	4139	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	4140	echo "export LOCAL_MRUN_PATH" >> $jobfile
	4141
[66]	4142	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	4143	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	4144	then
	4145	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	4146	fi
[1]	4147
	4148	# MRUN AUF ZIELRECHNER AUFRUFEN
	4149	echo "set -x" >> $jobfile
	4150	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	4151
	4152	echo 'ls -al; echo `pwd`' >> $jobfile
	4153	echo "cd \$HOME" >> $jobfile
	4154	echo "rm -rf $TEMPDIR" >> $jobfile
	4155
	4156
	4157
	4158
	4159	# JOB PER SUBJOB STARTEN
	4160	if [[ $silent = false ]]
	4161	then
	4162	printf "\n "
	4163	else
	4164	printf "\n\n"
	4165	fi
	4166
[164]	4167	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	4168	rm -rf $jobfile
	4169
	4170
	4171	fi # ENDE REMOTE-TEIL
	4172
	4173
	4174
	4175	# ENDE DER PROZEDUR

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