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source: palm/trunk/SCRIPTS/mrun @ 188

Last change on this file since 188 was 188, checked in by letzel, 16 years ago
bugfix: typo removed in lcxt4 branch (mrun)
Property svn:keywords set to `Id`
File size: 145.6 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 188 2008-08-08 21:09:21Z letzel $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[1]	155
	156	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	157
	158	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	159	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	160	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	161
	162	AddFilenames=""
	163	additional_conditions=""
	164	add_source_path=""
	165	afname=""
	166	archive_save=true
	167	archive_system=none
	168	compiler_name=""
	169	cond1=""
	170	cond2=""
	171	config_file=.mrun.config
	172	cpp_opts=""
[82]	173	cpp_options=""
[1]	174	cpumax=0
	175	cpurest=0
	176	delete_temporary_catalog=true
	177	do_batch=false
	178	do_compile=true
	179	do_remote=false
	180	do_stagein=true
	181	do_stageout=true
	182	do_trace=false
	183	email_notification=""
	184	exclude=""
	185	executable=""
	186	execution_error=false
[67]	187	fimm=false
[1]	188	fname=test
	189	fromhost=""
[78]	190	global_revision=""
[122]	191	group_number=none
[1]	192	host=""
	193	host_file=""
	194	hp=""
	195	ignore_archive_error=false
	196	input_list=""
	197	interpreted_config_file=""
[164]	198	job_catalog="~/job_queue"
[1]	199	job_on_file=""
	200	keep_data_from_previous_run=false
[183]	201	link_local_input=false
[149]	202	link_local_output=false
[1]	203	localhost_realname=$(hostname)
	204	local_compile=false
	205	locat=normal
	206	mainprog=""
	207	makefile=""
	208	mc=$0
	209	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	210	do
	211	mc=`echo $mc \| cut -f2- -d"/"`
	212	done
	213	module_files=""
	214	mrun_script_name=$mc
[82]	215	netcdf_inc=""
	216	netcdf_lib=""
[1]	217	netcdf_support=false
	218	node_usage=default
	219	numprocs=""
	220	OOPT=""
	221	openmp=false
	222	output_list=""
	223	package_list=""
	224	punkte="..........................................................."
	225	queue=none
	226	read_from_config=""
[5]	227	restart_run=false
[146]	228	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	229	if [[ $return_addres = 130.75.105.158 ]]
	230	then
	231	return_addres=172.20.25.41
	232	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	233	fi
	234	# if [[ $return_addres = 210.117.65.1 ]]
	235	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	236	# then
	237	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	238	# fi
	239	return_password=""
	240	return_username=$LOGNAME
	241	remotecall=false
	242	remote_username=""
[102]	243	run_coupled_model=false
[1]	244	run_mode=""
	245	scirocco=false
	246	store_on_archive_system=true
	247	striche=" ----------------------------------------------------------------------------"
	248	silent=false
	249	source_list=""
	250	source_path=SOURCE
	251	tasks_per_node=""
	252	threads_per_task=1
	253	tmpcreate=false
	254	tmp_data_catalog=""
	255	transfer_problems=false
	256	usern=$LOGNAME
	257	working_directory=`pwd`
	258	TOPT=""
	259	XOPT=""
	260	zeit=$( date \| cut -c 12-19 )
	261
	262	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[102]	263	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	264
[66]	265	typeset -R30 calltime
[1]	266	typeset -L20 spalte1
	267	typeset -L40 spalte2
	268	typeset -L60 spalte3
	269	typeset -L35 string1=`date`
	270	typeset -L12 string2=$usern
	271	typeset -L12 string3=$localhost_realname
	272	typeset -L12 string4
	273	typeset -L12 string5
[169]	274	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
[1]	275
	276
	277
	278	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	279	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	280
	281	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	282	# EXPORTIERT WERDEN
	283	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	284	export group_number input_list memory numprocs output_list queue run_mode
[1]	285
	286
	287
	288	# FEHLERBEHANDLUNG
	289	# BEI EXIT:
[83]	290	trap 'rm -rf $working_directory/tmp_mrun
[69]	291	if [[ $locat != localhost ]]
[1]	292	then
[22]	293	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	294	# then
	295	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	296	#MRUN-calls on $localhost
	297	#
	298	#date and time user localhost remotehost termination mrun-command
	299	#--------------------------------------------------------------------------------------------------------------------
	300	#%STATEND%
	301	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	302	# fi
	303	#
	304	# # EINTRAG IN DIE STATISTIK-DATEI
	305	# string4=$host
	306	# string5=$locat
	307	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	308	# then
	309	# if [[ $do_batch = true ]]
	310	# then
	311	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	312	# else
	313	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	314	# fi
	315	# fi
[69]	316	echo " " > /dev/null
[1]	317	fi
	318
	319	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	320	then
	321
	322	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	323	(( i = 0 ))
	324	while (( i < iec ))
	325	do
	326	(( i = i + 1 ))
	327	printf "\n *** Execution of ERROR-command:\n"
	328	printf " >>> ${err_command[$i]}\n"
	329	eval ${err_command[$i]}
	330	done
	331	if [[ -n $interpreted_config_file ]] then
	332	rm -rf $interpreted_config_file
	333	fi
[71]	334	if [[ -n .mrun_environment ]] then
	335	rm -rf .mrun_environment
	336	fi
[1]	337	if [[ $tmpcreate = true ]]
	338	then
	339	printf "\n *** Contents of \"$TEMPDIR\":\n"
	340	ls -al; cd
	341	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	342	fi
	343	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	344	then
	345	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	346	fi
	347	printf "\n\n+++ MRUN killed \n\n"
	348	elif [[ $locat != control_c ]]
	349	then
	350	printf "\n\n --> all actions finished\n\n"
	351	printf " Bye, bye $usern !!\n\n"
	352	fi' exit
	353
	354
	355	# BEI TERMINAL-BREAK:
[83]	356	trap 'rm -rf $working_directory/tmp_mrun
[69]	357	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	358	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	359	then
	360	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	361	fi
	362	printf "\n+++ MRUN killed by \"^C\" \n\n"
	363	locat=control_c
	364	exit
	365	' 2
	366
	367
[22]	368	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	369	# BEEN SET
	370	if [[ "$PALM_BIN" = "" ]]
	371	then
	372	printf "\n +++ environment variable PALM_BIN has not been set"
	373	printf "\n please set it to the directory where the PALM scripts are located"
	374	locat=palm_bin; exit
	375	fi
[180]	376	export PATH=$PALM_BIN:$PATH
[22]	377
	378
[1]	379
	380	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	381	# FUER FOLGEJOBS BENOETIGT WIRD
[122]	382	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
[1]	383	do
	384	case $option in
	385	(a) afname=$OPTARG;;
	386	(A) store_on_archive_system=false; mc="$mc -A";;
	387	(b) do_batch=true; mc="$mc -b";;
	388	(B) delete_temporary_catalog=false; mc="$mc -B";;
	389	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	390	(C) restart_run=true; mc="$mc -C";;
[1]	391	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	392	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	393	(F) job_on_file="-D"; mc="$mc -F";;
[122]	394	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	395	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	396	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	397	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	398	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	399	(I) ignore_archive_error=true; mc="$mc -I";;
	400	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	401	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	402	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	403	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	404	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	405	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	406	(O) use_openmp=true; mc="$mc -O";;
	407	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	408	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	409	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	410	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	411	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	412	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	413	(S) read_from_config=false; mc="$mc -S";;
	414	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	415	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	416	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	417	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	418	(v) silent=true; mc="$mc -v";;
	419	(x) do_trace=true;set -x; mc="$mc -x";;
	420	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[102]	421	(Y) run_coupled_model=true; mc="$mc -Y";;
[1]	422	(\?) printf "\n +++ unknown option $OPTARG \n"
	423	printf "\n --> type \"$0 ?\" for available options \n"
	424	locat=parameter;exit;;
	425	esac
	426	done
	427
	428
	429	# EVTL. POSITIONSPARAMETER EINLESEN
	430	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	431	shift OPTIND-1
	432
	433
	434	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	435	if [[ "$1" = "?" ]]
	436	then
	437	(printf "\n *** mrun can be called as follows:\n"
	438	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	439	printf "\n Description of available options:\n"
	440	printf "\n Option Description Default-Value"
	441	printf "\n -a base name of input files equiv. -d"
	442	printf "\n -A no archiving when using file-attribute fl"
	443	printf "\n -b batch-job on local machine ---"
	444	printf "\n -B do not delete temporary directory at end ---"
	445	printf "\n -c configuration file .mrun.config"
	446	printf "\n -d base name of files attached to program test"
	447	printf "\n -D preprocessor(cpp)-directives \"\" "
	448	printf "\n -F create remote job file only ---"
	449	printf "\n -h execution host $localhost_realname"
	450	printf "\n -i INPUT control list \"\" "
	451	printf "\n -I archiving errors of previous batch-jobs"
	452	printf "\n will be ignored"
	453	printf "\n -k keep data from previous run"
	454	printf "\n -K additional conditions for controling"
	455	printf "\n usage of conditional code and"
	456	printf "\n env-variables in configuration file \"\" "
	457	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	458	printf "\n -M Makefile name Makefile"
	459	printf "\n -n node usage (shared/not_shared) depending on -h"
	460	printf "\n -o OUTPUT control list \"\" "
	461	printf "\n -O use OpenMP ---"
	462	printf "\n -p software package list \"\" "
	463	printf "\n -q queue \"$queue\" "
	464	printf "\n -r run control list (combines -i -o) \"\" "
	465	printf "\n -s filenames of routines to be compiled \"\" "
	466	printf "\n must end with .f, .f90, .F, or .c !"
	467	printf "\n use \"..\" for more than one file and wildcards"
	468	printf "\n -s TEST compiles all files with w-permit"
	469	printf "\n -S config file interpreted by shellscript ---"
	470	printf "\n -t allowed cpu-time in seconds (batch) 0"
	471	printf "\n -T tasks per node depending on -h"
	472	printf "\n -u username on remote machine \"\" "
	473	printf "\n -v no prompt for confirmation ---"
	474	printf "\n -x tracing of mrun for debug purposes ---"
	475	printf "\n -X # of processors (on parallel machines) 1"
[102]	476	printf "\n -Y run coupled model ---"
[1]	477	printf "\n "
	478	printf "\n Possible values of positional parameter <modus>:"
	479	printf "\n \"?\" - this outline \n\n") \| more
	480	exit
	481	elif [[ "$1" != "" ]]
	482	then
	483	printf "\n +++ positional parameter $1 unknown \n"
	484	locat=parameter; exit
	485	fi
	486
	487
	488
	489	# KURZE STARTMELDUNG
	490	printf "\n*** $version "
	491	printf "\n will be executed. Please wait ..."
	492
	493
[82]	494
	495	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	496	if [[ ! -f $config_file ]]
	497	then
	498	printf "\n\n +++ configuration file: "
	499	printf "\n $config_file"
	500	printf "\n does not exist"
	501	locat=connect; exit
	502	fi
	503
	504
	505	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	506	line=""
	507	grep "%host_identifier" $config_file > tmp_mrun
	508	while read line
	509	do
	510	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	511	then
	512	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	513	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	514	if [[ $localhost_realname = $HOSTNAME ]]
[82]	515	then
	516	localhost=$host_identifier
	517	break
	518	fi
	519	fi
	520	done < tmp_mrun
	521
	522	if [[ "$localhost" = "" ]]
	523	then
	524	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	525	printf "\n for local host \"$localhost_realname\"."
	526	printf "\n Please add line"
	527	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	528	printf "\n to the configuration file."
	529	locat=localhost; exit
	530	fi
	531
	532
	533
	534	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	535	case $localhost_realname in
	536	(breg-en0\|berni-en0) archive_system=tivoli;;
	537	(cs*) archive_system=ut;;
	538	(fimm.bccs.uib.no) fimm=true;;
	539	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	540	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	541	(scirocco) scirocco=true;;
	542	esac
	543
	544
	545
[1]	546	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	547	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	548	[[ "$afname" = "" ]] && afname=$fname
	549
	550
	551	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	552	if [[ "$run_mode" != "" ]]
	553	then
	554	input_list="$input_list $run_mode"
	555	output_list="$output_list $run_mode"
	556	fi
	557
	558
	559	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	560	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	561	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	562	# STARTET)
	563	if [[ "$fromhost" = "" ]]
	564	then
	565	fromhost=$localhost
	566	fi
	567
	568
	569	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	570	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	571	then
	572	source_list=TEST
	573	local_compile=true
	574	host=$localhost
	575	fi
	576
	577
	578	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	579	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	580	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	581	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	582	if [[ -n $host && "$host" != $localhost ]]
	583	then
	584	do_batch=true
	585	do_remote=true
	586	case $host in
[181]	587	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
[1]	588	(*) printf "\n"
[83]	589	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	590	printf "\n is not available"
[1]	591	locat=nqs; (( iec = 0 )); exit;;
	592	esac
	593	else
	594	host=$localhost
	595	fi
	596
	597
	598	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	599	if [[ -n $additional_conditions ]]
	600	then
[69]	601	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	602	cond1=`echo $additional_conditions \| cut -d" " -f1`
	603	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	604	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	605	if [[ -n $dummy ]]
	606	then
	607	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	608	locat=options; exit
	609	fi
	610	fi
	611
	612
	613	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	614	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	615	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	616	then
	617	if [[ $ignore_archive_error = false ]]
	618	then
	619	printf "\n +++ data archiving of previous run failed"
	620	printf "\n see directory \~/job_queue on remote machine"
	621	locat=archive; exit
	622	else
	623	printf "\n +++ warning: data archiving in a previous run failed"
	624	printf "\n MRUN continues, trying to get backup copy"
	625	fi
	626	fi
	627
	628
	629
	630	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	631	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	632	if [[ "$read_from_config" = false ]]
	633	then
	634
	635	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	636	while read zeile
	637	do
	638	[[ $silent = false ]] && printf "."
	639
	640
	641	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	642	# ERSETZEN
	643	eval zeile=\"$zeile\"
	644
	645
	646	# INTERPRETATION DER ZEILE
[21]	647	if [[ "$(echo $zeile)" = "" ]]
[1]	648	then
[21]	649	# LEERZEILE, KEINE AKTION
	650	continue
[1]	651
[21]	652	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	653	then
	654
[1]	655	# ZEILE IST KOMMENTARZEILE
	656	true
	657
	658	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	659	then
	660
	661	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	662	zeile=$(echo $zeile \| cut -c2-)
[69]	663	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	664	var=`echo $zeile \| cut -d" " -f1`
	665	value=`echo $zeile \| cut -d" " -s -f2`
	666	for_host=`echo $zeile \| cut -d" " -s -f3`
	667	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	668	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	669
	670	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	671	then
	672
	673	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	674	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	675	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	676
	677
	678	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	679	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	680	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	681	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	682	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	683	# KONFIGURATIONSDATEI
	684	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	685	then
	686	eval $var=\$value
	687
	688	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	689	if [[ $do_trace = true ]]
	690	then
	691	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	692	fi
	693	fi
	694
	695	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	696	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	697	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	698	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	699	if [[ $var = host ]]
	700	then
	701	if [[ -n $host && "$host" != $localhost ]]
	702	then
	703	do_batch=true
	704	do_remote=true
	705	case $host in
[181]	706	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[83]	707	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	708	printf "\n is not available"
[1]	709	locat=nqs; exit;;
	710	esac
	711	else
	712	host=$localhost
	713	fi
	714	fi
	715
	716	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	717	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	718	# DEN PROGRAMMEN BENOETIGT WERDEN
	719	export $var
	720	fi
	721
	722
	723
	724
	725	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	726	then
	727
	728	# ZEILE DEFINIERT ERROR-KOMMANDO
	729	(( iec = iec + 1 ))
	730	zeile=$(echo $zeile \| cut -c4-)
	731	err_command[$iec]="$zeile"
	732
	733	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	734	then
	735
	736	# ZEILE DEFINIERT INPUT-KOMMANDO
	737	(( iic = iic + 1 ))
	738	zeile=$(echo $zeile \| cut -c4-)
	739	in_command[$iic]="$zeile"
	740
	741	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	742	then
	743
	744	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	745	(( ioc = ioc + 1 ))
	746	zeile=$(echo $zeile \| cut -c4-)
	747	out_command[$ioc]="$zeile"
	748
	749	else
	750
	751	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	752	# s2a: in/out - Feld
	753	# s2b: loc - Feld (optional)
	754	# s2c: tr/ar - Feld (optional)
[69]	755	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	756	s1=`echo $zeile \| cut -d" " -f1`
	757	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	758	s2a=$(echo $s2 \| cut -d":" -f1)
	759	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	760	then
	761	s2b=""
	762	s2c=""
	763	else
[69]	764	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	765	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	766	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	767	fi
[69]	768	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	769	s3=`echo $zeile \| cut -d" " -f3`
	770	s4=`echo $zeile \| cut -d" " -s -f4`
	771	s5=`echo $zeile \| cut -d" " -s -f5`
	772	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	773
	774
	775	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	776	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	777	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	778	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	779	# HANDEN SEIN MUSS (D.H. s2b = loc)
	780	IFSALT="$IFS"; IFS="$IFS:"
	781	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	782	then
	783	found=false
	784	for actual in $input_list
	785	do
	786	for formal in $s3
	787	do
	788	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	789	done
	790	done
	791	if [[ $found = true ]]
	792	then
	793	(( iin = iin + 1 ))
	794	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	795	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	796	extin[$iin]=$s6
	797	fi
	798	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	799	then
	800	found=false
	801	for actual in $output_list
	802	do
	803	for formal in $s3
	804	do
	805	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	806	done
	807	done
	808	if [[ $found = true ]]
	809	then
	810	(( iout = iout + 1 ))
	811	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	812	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	813	fi
	814	elif [[ "$s2a" != in && "$s2a" != out ]]
	815	then
	816	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	817	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	818	locat=connect; exit
	819	fi
	820	IFS="$IFSALT"
	821	fi
	822	done < $config_file
	823
	824	else
	825
	826
	827	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	828	[[ $silent = false ]] && printf "..."
	829	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	830	export interpreted_config_file=.icf.$RANDOM
	831
	832
[69]	833
	834	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	835	# VERFUEGUNG STELLEN
	836	cat > .mrun_environment << %%END%%
	837	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	838	config_file = '$config_file', do_remote = '$do_remote',
	839	do_trace = '$do_trace', host = '$host',
	840	input_list = '$input_list', icf = '$interpreted_config_file',
	841	localhost = '$localhost', output_list = '$output_list' /
	842
	843	%%END%%
	844
	845	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	846	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	847	mrun_memory=$memory
[127]	848	mrun_group_number=$group_number
[69]	849	mrun_cpumax=$cpumax
	850	mrun_numprocs=$numprocs
	851
[66]	852	if [[ $localhost_realname = "gate" ]]
	853	then
	854	interpret_config_gate.x
	855	else
	856	interpret_config.x
	857	fi
[71]	858	rm .mrun_environment
[1]	859
[71]	860
[1]	861	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	862	chmod u+x $interpreted_config_file
	863	export PATH=$PATH:.
	864	. $interpreted_config_file
[71]	865	rm $interpreted_config_file
[1]	866
[71]	867
[69]	868	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	869	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	870	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	871	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	872	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	873
[1]	874	fi
	875
	876
	877	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	878	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	879	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	880	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	881	if [[ "$SOURCES_COMPLETE" = "" ]]
	882	then
	883
	884	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	885	# VEREINBART WURDE
	886	source_path=""
	887	line=""
	888	grep "%source_path" $config_file > tmp_mrun
	889	while read line
	890	do
	891	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	892	then
	893	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	894	then
	895	global_source_path=`echo $line \| cut -d" " -f2`
	896	fi
	897	fi
	898	done < tmp_mrun
	899
	900	line=""
	901	found=false
	902	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	903	while read line
	904	do
	905	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	906	then
	907	if [[ $found = true ]]
	908	then
	909	printf "\n\n +++ more than one source path found in configuration file"
	910	printf "\n for local host \"$localhost\" "
	911	locat=source_path; exit
	912	fi
	913	source_path=`echo $line \| cut -d" " -f2`
	914	found=true
	915	fi
	916	done < tmp_mrun
	917	rm tmp_mrun
	918
	919	if [[ "$source_path" = "" ]]
	920	then
	921	if [[ "$global_source_path" != "" ]]
	922	then
	923	source_path=$global_source_path
	924	else
	925	printf "\n\n +++ no source path found in configuration file"
	926	printf "\n for local host \"$localhost\" "
	927	locat=source_path; exit
	928	fi
	929	fi
	930	eval source_path=$source_path
	931
	932	if [[ ! -d $source_path ]]
	933	then
	934	printf "\n\n +++ source path \"$source_path\" on local host"
	935	printf "\n \"$localhost\" does not exist"
	936	locat=source_path; exit
	937	fi
	938
	939	fi
	940
	941
[78]	942	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	943	# DURCH OPTION -G MITGETEILT)
	944	if [[ "$global_revision" = "" ]]
	945	then
	946	global_revision=`svnversion $source_path 2>/dev/null`
	947	global_revision="Rev: $global_revision"
	948	fi
[1]	949
[78]	950
[1]	951	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	952	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	953	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	954	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	955	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	956	if [[ -n $host && "$host" != $localhost ]]
	957	then
	958	do_batch=true
	959	do_remote=true
	960	case $host in
[181]	961	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[1]	962	(*) printf "\n"
[83]	963	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	964	printf "\n is not available"
[1]	965	locat=nqs; (( iec = 0 )); exit;;
	966	esac
	967	else
	968	host=$localhost
	969	fi
	970
	971
	972	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	973	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	974	then
	975
	976	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	977	if [[ ! -n $numprocs ]]
	978	then
	979	printf "\n"
	980	printf "\n +++ option \"-K parallel\" requires additional specification"
	981	printf "\n of the number of processors to be used by"
	982	printf "\n mrun-option \"-X\" or by environment-variable"
	983	printf "\n \"numprocs\" in the configuration file"
	984	locat=numprocs; (( iec = 0 )); exit
	985	fi
	986
	987	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	988	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	989	# GESAMTPROZESSORANZAHL IST
	990	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	991	then
	992	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	993	(( ival = $tasks_per_node ))
	994	(( pes = numprocs ))
	995	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	996	# then
	997	# (( pes = pes - 1 ))
	998	# fi
	999	(( ii = pes / ival ))
	1000	if (( pes - ii * ival > 0 ))
	1001	then
	1002	printf "\n"
	1003	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1004	printf "\n divisor of the total number of processors (option \"-X\")"
	1005	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1006	locat=tasks_per_node; (( iec = 0 )); exit
	1007	fi
	1008	fi
	1009
	1010	# IBMY HAT NUR EINEN KNOTEN
	1011	if [[ $host = ibmy ]]
	1012	then
	1013	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1014	then
	1015	printf "\n"
	1016	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1017	printf "\n total number of processors (option \"-X\")"
	1018	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1019	locat=tasks_per_node; (( iec = 0 )); exit
	1020	fi
	1021	fi
	1022
	1023	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1024	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1025	if [[ $use_openmp = true ]]
	1026	then
	1027	threads_per_task=$tasks_per_node
	1028	tasks_per_node=1
	1029	fi
	1030	OOPT="-O $threads_per_task"
	1031	TOPT="-T $tasks_per_node"
	1032
	1033	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1034	if [[ "$tasks_per_node" != "" ]]
	1035	then
	1036	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1037	fi
	1038
	1039	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1040	# SETZEN
	1041	if [[ $node_usage = default ]]
	1042	then
	1043	if [[ $host = ibms ]]
	1044	then
	1045	node_usage=shared
[118]	1046	elif [[ $host = lctit ]]
	1047	then
[129]	1048	node_usage=sla3
[181]	1049	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1050	then
	1051	node_usage=singlejob
[1]	1052	else
	1053	node_usage=not_shared
	1054	fi
	1055	fi
[181]	1056
	1057	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1058	then
	1059	printf "\n"
	1060	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1061	printf "\n \"shared\" or \"not_shared\""
	1062	locat=tasks_per_node; (( iec = 0 )); exit
	1063	fi
	1064
	1065	fi
	1066
	1067	# PRUEFEN, OB HOSTFILE EXISTIERT
	1068	if [[ -n $hostfile ]]
	1069	then
	1070	if [[ ! -f $hostfile ]]
	1071	then
	1072	printf "\n"
	1073	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1074	locat=hostfile; exit
	1075	fi
	1076	fi
	1077
	1078	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1079	if [[ $host = ibmy && $do_remote = false ]]
	1080	then
	1081	if [[ ! -f $HOME/.rhosts ]]
	1082	then
	1083	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1084	printf "\n\n *** file:"
	1085	printf "\n $HOME/.rhosts"
	1086	printf "\n was created\n"
	1087	fi
	1088	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1089	then
	1090	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1091	printf "\n\n *** file:"
	1092	printf "\n $HOME/.rhosts"
	1093	printf "\n was extended by the name of the current host\n"
	1094	fi
	1095	fi
	1096
	1097
	1098
	1099	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1100	if [[ $queue = none ]]
	1101	then
	1102	case $host in
	1103	(ibmb) if [[ $node_usage = shared ]]
	1104	then
	1105	queue=cshare
	1106	else
	1107	queue=csolo
	1108	fi;;
	1109	(ibmh) if [[ $node_usage = shared ]]
	1110	then
	1111	queue=cshare
	1112	else
	1113	queue=csolo
	1114	fi;;
	1115	(ibmy) queue=parallel;;
[129]	1116	(lctit) queue=sla3;;
[1]	1117	(nech) queue=none;;
	1118	(neck) queue=P;;
	1119	(unics) queue=unics;;
	1120	esac
	1121	fi
	1122
	1123
	1124	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1125	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1126	# ERMITTELN
	1127	(( i = 0 ))
	1128	while (( i < iin ))
	1129	do
	1130	(( i = i + 1 ))
	1131	(( maxcycle = 0 ))
	1132
	1133	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1134	if [[ "${actionin[$i]}" = di ]]
	1135	then
	1136	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1137	# REM-MASCHINE AUSWERTEN
	1138	eval filename=${pathin[$i]}/${endin[$i]}
	1139	else
	1140	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1141	# REM-MASCHINE AUSWERTEN
	1142	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1143	fi
	1144
	1145	# PRUEFEN AUF VORHANDENSEIN
	1146	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1147	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1148	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1149	then
	1150	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1151	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1152	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1153	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1154	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1155	if [[ "${transin[$i]}" != "locopt" ]]
	1156	then
	1157	printf "\n\n +++ INPUT-file: "
	1158	if [[ "${extin[$i]}" = "" ]]
	1159	then
	1160	printf "\n $filename"
	1161	else
	1162	printf "\n $filename.${extin[$i]}"
	1163	fi
	1164	printf "\n does not exist\n"
	1165	locat=input; exit
	1166	else
	1167	transin[$i]="unavailable"
	1168	fi
	1169	else
	1170
	1171	# ZYKLUSNUMMER FESTSTELLEN
	1172	ls -1 -d $filename > filelist 2>/dev/null
	1173	ls -1 -d $filename.* >> filelist 2>/dev/null
	1174	while read zeile
	1175	do
	1176	cycle=$(print $zeile \| cut -f2 -d".")
	1177	if [[ "$cycle" = "$zeile" ]]
	1178	then
	1179	(( icycle = 0 ))
	1180	elif [[ "$cycle" = "${extin[$i]}" ]]
	1181	then
	1182	(( icycle = 0 ))
	1183	else
	1184	(( icycle = $cycle ))
	1185	fi
	1186	if (( icycle > maxcycle ))
	1187	then
	1188	(( maxcycle = icycle ))
	1189	file_to_be_used=$zeile
	1190	fi
	1191	done <filelist
	1192	rm filelist
	1193
	1194	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1195	if (( maxcycle > 0 ))
	1196	then
	1197	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1198	then
	1199	filename=${filename}.$maxcycle.${extin[$i]}
	1200	else
	1201	filename=${filename}.$maxcycle
	1202	fi
	1203	else
	1204	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1205	then
	1206	filename=${filename}.${extin[$i]}
	1207	fi
	1208	fi
	1209
	1210	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1211	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1212	absnamein[$i]=$filename
	1213	if (( maxcycle > 0 ))
	1214	then
	1215	if [[ "${actionin[$i]}" = di ]]
	1216	then
	1217	frelin[$i]=${endin[$i]}.$maxcycle
	1218	else
	1219	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1220	fi
	1221	else
	1222	if [[ "${actionin[$i]}" = di ]]
	1223	then
	1224	frelin[$i]=${endin[$i]}
	1225	else
	1226	frelin[$i]=${afname}${endin[$i]}
	1227	fi
	1228	fi
	1229
	1230	fi
	1231	done
	1232
	1233
	1234	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1235	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1236	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1237	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1238	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1239	(( i = 0 ))
	1240	while (( i < iout ))
	1241	do
	1242	(( i = i + 1 ))
	1243	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1244	then
	1245	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1246	then
	1247	actionout[$i]=""
	1248	elif [[ "${actionout[$i]}" = tra ]]
	1249	then
	1250	actionout[$i]=a
	1251	fi
	1252	(( maxcycle = 0 ))
	1253	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1254	eval catalogname=${pathout[$i]}
	1255	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1256	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1257	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1258	then
	1259
	1260	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1261	if cat /dev/null > $filename
	1262	then
	1263	rm $filename
	1264	else
	1265
	1266	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1267	if [[ ! -d $catalogname ]]
	1268	then
	1269	if mkdir -p $catalogname
	1270	then
	1271	printf "\n\n *** directory:"
	1272	printf "\n $catalogname"
	1273	printf "\n was created\n"
	1274	else
	1275	printf "\n\n +++ OUTPUT-file:"
	1276	printf "\n $filename"
	1277	printf "\n cannot be created, because directory does not exist"
	1278	printf "\n and cannot be created either"
	1279	printf "\n"
	1280	locat=output ; exit
	1281	fi 2>/dev/null
	1282	else
	1283	printf "\n\n +++ OUTPUT-file:"
	1284	printf "\n $filename"
	1285	printf "\n cannot be created, although directory exists"
	1286	printf "\n"
	1287	locat=output ; exit
	1288	fi
	1289	fi 2>/dev/null
	1290	else
	1291
	1292	# ZYKLUSNUMMER FESTSTELLEN
	1293	ls -1 -d $filename > filelist 2>/dev/null
	1294	ls -1 -d $filename.* >> filelist 2>/dev/null
	1295	while read zeile
	1296	do
	1297	cycle=$(print $zeile \| cut -f2 -d".")
	1298	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1299	then
	1300	(( icycle = 1 ))
	1301	else
	1302	(( icycle = $cycle + 1 ))
	1303	fi
	1304	if (( icycle > maxcycle ))
	1305	then
	1306	(( maxcycle = icycle ))
	1307	fi
	1308	done <filelist
	1309	rm filelist
	1310	fi
	1311
	1312	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1313	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1314	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1315	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1316	if [[ "${actionout[$i]}" != a ]]
	1317	then
	1318	if (( maxcycle > 0 ))
	1319	then
	1320	filename=${filename}.$maxcycle
	1321	if cat /dev/null > $filename
	1322	then
	1323	rm $filename
	1324	else
	1325	printf "\n +++ OUTPUT-file:"
	1326	printf "\n $filename"
	1327	printf "\n cannot be created"
	1328	locat=output ; exit
	1329	fi
	1330	fi
	1331	else
	1332	(( maxcycle = maxcycle - 1 ))
	1333	if (( maxcycle > 0 ))
	1334	then
	1335	filename=${filename}.$maxcycle
	1336	fi
	1337	fi
	1338
	1339	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1340	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1341	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1342	pathout[$i]=$filename
	1343	if (( maxcycle > 0 ))
	1344	then
	1345	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1346	else
	1347	frelout[$i]=${fname}${endout[$i]}
	1348	fi
	1349
	1350	fi
	1351	done
	1352
	1353
[83]	1354	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1355	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1356	then
	1357	if [[ "$dvrp_inc" = "" ]]
	1358	then
	1359	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1360	printf "\n This is required for the dvrp_graphics package.\n"
	1361	locat=dvrp; exit
	1362	fi
	1363	if [[ "$dvrp_lib" = "" ]]
	1364	then
	1365	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1366	printf "\n This is required for the dvrp_graphics package.\n"
	1367	locat=dvrp; exit
	1368	fi
	1369	fi
	1370
	1371
[1]	1372	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1373	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1374	# UEBERSETZT ZU WERDEN)
	1375	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1376	then
	1377	printf "\n +++ neither main program nor executable defined"
	1378	locat=source; exit
	1379	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1380	then
	1381	printf "\n +++ main program as well as executable defined"
	1382	locat=source; exit
	1383	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1384	then
	1385	do_compile=false
	1386	fi
	1387
	1388
	1389	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1390	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1391	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1392	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1393	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1394	then
	1395
[5]	1396	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1397	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1398
[5]	1399	if [[ $restart_run != true ]]
[1]	1400	then
	1401	rm -rf SOURCES_FOR_RUN_$fname
	1402	mkdir SOURCES_FOR_RUN_$fname
	1403	fi
	1404
	1405
	1406	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1407	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1408	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1409	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1410	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1411	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1412	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1413	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1414	# GESAMMELT
[5]	1415	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1416	then
	1417
	1418	source_list=""
	1419	cd $source_path
	1420
	1421
	1422	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1423	Names=$(ls -1 *.f90 2>&1)
	1424	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1425	Names=$(ls -1 *.F90 2>&1)
	1426	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1427	Names=$(ls -1 *.F 2>&1)
	1428	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1429	Names=$(ls -1 *.f 2>&1)
	1430	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1431	Names=$(ls -1 *.c 2>&1)
	1432	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1433
	1434
	1435	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1436	for dateiname in $Filenames
	1437	do
	1438	if [[ -w $dateiname ]]
	1439	then
	1440	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1441	then
	1442	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1443	source_list=$source_list"$dateiname "
	1444	fi
	1445	fi
	1446	done
	1447
	1448	cd - > /dev/null
	1449
	1450
[5]	1451	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1452	then
	1453
	1454	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1455	source_list=""
	1456	cd $source_path
	1457
	1458
	1459	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1460	if [[ ! -d .svn ]]
	1461	then
	1462	printf "\n\n +++ source directory"
	1463	printf "\n \"$source_path\" "
	1464	printf "\n is not under control of \"subversion\"."
	1465	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1466	fi
	1467
	1468
	1469	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1470	Filenames=""
[69]	1471	svn status > tmp_mrun
	1472	while read line
[5]	1473	do
	1474	firstc=`echo $line \| cut -c1`
	1475	if [[ $firstc = M \|\| $firstc = "?" ]]
	1476	then
	1477	Name=`echo "$line" \| cut -c8-`
	1478	extension=`echo $Name \| cut -d. -f2`
	1479	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1480	then
	1481	Filenames="$Filenames "$Name
	1482	fi
	1483	fi
[69]	1484	done < tmp_mrun
[5]	1485
	1486
	1487	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1488	for dateiname in $Filenames
	1489	do
	1490	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1491	source_list=$source_list"$dateiname "
	1492	done
	1493
	1494	cd - > /dev/null
	1495
	1496
[1]	1497	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1498	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1499	# VORHANDEN
[5]	1500	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1501	then
	1502
	1503	cd $source_path
	1504
	1505	for filename in $source_list
	1506	do
	1507
	1508	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1509	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1510	then
	1511	printf "\n +++ source code file: $filename"
	1512	printf "\n must not contain (\"/\") "
	1513	locat=source; exit
	1514	fi
	1515
	1516	if [[ ! -f $filename ]]
	1517	then
	1518	printf "\n +++ source code file: $filename"
	1519	printf "\n does not exist"
	1520	locat=source; exit
	1521	else
	1522	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1523	fi
	1524
	1525	done
	1526
	1527	cd - > /dev/null
	1528
	1529	fi
	1530
	1531
	1532	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1533	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1534	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1535	if [[ $restart_run != true ]]
[1]	1536	then
	1537
	1538	if [[ ! -f "$source_path/$mainprog" ]]
	1539	then
	1540	printf "\n\n +++ main program: $mainprog"
	1541	printf "\n does not exist in source directory"
	1542	printf "\n \"$source_path\"\n"
	1543	locat=source; exit
	1544	else
	1545	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1546	then
	1547	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1548	source_list=${mainprog}" $source_list"
	1549	fi
	1550	fi
	1551	fi
	1552
	1553
	1554	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1555	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1556	then
	1557
	1558	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1559	if [[ ! -d $add_source_path ]]
	1560	then
	1561	printf "\n\n +++ WARNING: additional source code directory"
	1562	printf "\n \"$add_source_path\" "
	1563	printf "\n does not exist or is not a directory."
	1564	printf "\n No source code will be used from this directory!\n"
	1565	add_source_path=""
	1566	sleep 3
	1567	else
	1568
	1569	cd $add_source_path
	1570
	1571	Names=$(ls -1 *.f90 2>&1)
	1572	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1573	Names=$(ls -1 *.F90 2>&1)
	1574	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1575	Names=$(ls -1 *.F 2>&1)
	1576	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1577	Names=$(ls -1 *.f 2>&1)
	1578	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1579	Names=$(ls -1 *.c 2>&1)
	1580	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1581
	1582	cd - > /dev/null
	1583	cd SOURCES_FOR_RUN_$fname
	1584
	1585	for dateiname in $AddFilenames
	1586	do
	1587	if [[ -f $dateiname ]]
	1588	then
	1589	printf "\n +++ source code file \"$dateiname\" found in additional"
	1590	printf "\n source code directory \"$add_source_path\" "
	1591	printf "\n as well as in directory \"$source_path\"."
	1592	locat=source; exit
	1593	fi
	1594
	1595	cp $add_source_path/$dateiname .
	1596	source_list="$source_list $dateiname"
	1597
	1598	# Default User-Interface von der Liste entfernen, falls Datei
	1599	# ein User-Interface enthaelt
	1600	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1601	then
[50]	1602	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1603	then
	1604	rm -rf user_interface.f90
	1605	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1606	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1607	printf "\n since a user-interface is found in file"
	1608	printf "\n \"$add_source_path/$dateiname\" \n"
	1609	sleep 3
	1610	else
	1611	printf "\n\n *** user-interface file \"$dateiname\" "
	1612	printf "\n added to the files to be translated \n"
	1613	sleep 3
	1614	fi
	1615	fi
	1616	done
	1617
	1618	cd - > /dev/null
	1619	fi
	1620	fi
	1621
	1622
	1623	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1624	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1625	if [[ $restart_run != true && -n $package_list ]]
[1]	1626	then
	1627
	1628	cd $source_path
	1629
	1630	for package in $package_list
	1631	do
	1632
	1633	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1634
	1635	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1636	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1637	# LIEFERT
	1638	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1639
	1640
	1641	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1642	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1643	for source_list_name in $package_source_list
	1644	do
	1645	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1646	then
	1647
	1648	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1649	ending=`echo $source_list_name \| cut -f2 -d.`
	1650	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1651	then
	1652	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1653	source_list="$source_list $source_list_name"
	1654	fi
	1655	fi
	1656	done
	1657	done
	1658
	1659	cd - > /dev/null
	1660	fi
	1661
	1662
	1663	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1664	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1665	if [[ "$restart_run" != true ]]
[1]	1666	then
	1667	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1668	if [[ ! -f $makefile ]]
	1669	then
	1670	printf "\n +++ file \"$makefile\" does not exist"
	1671	locat=make; exit
	1672	else
	1673	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1674	fi
	1675	fi
	1676
	1677	fi # do_compile=true
	1678
	1679
	1680	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1681	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1682	if [[ $do_compile = true ]]
	1683	then
	1684
	1685	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1686	# ZUSAMMENSETZEN
[83]	1687	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1688	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1689	then
[82]	1690	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1691	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1692	then
[82]	1693	cpp_options="$cpp_options -D__nec"
	1694	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1695	then
	1696	cpp_options="$cpp_options -D__lc"
[1]	1697	else
[82]	1698	cpp_options="$cpp_options -D__$localhost"
[1]	1699	fi
[83]	1700
	1701	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1702	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1703	then
[82]	1704	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1705	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1706	else
[82]	1707	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1708	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1709	fi
[83]	1710
	1711	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1712	if [[ -n $package_list ]]
	1713	then
	1714	for package in $package_list
	1715	do
	1716	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1717	then
	1718	if [[ $package != "dvrp_graphics+1PE" ]]
	1719	then
[82]	1720	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1721	else
[82]	1722	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1723	export use_seperate_pe_for_dvrp_output=true
	1724	fi
	1725	else
	1726	if [[ $package != "dvrp_graphics+1PE" ]]
	1727	then
[82]	1728	cpp_options="$cpp_options -D__$package"
[1]	1729	else
[82]	1730	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1731	export use_seperate_pe_for_dvrp_output=true
	1732	fi
	1733	fi
	1734	done
	1735	fi
[83]	1736
	1737	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1738	if [[ -n $cpp_opts ]]
	1739	then
	1740	for popts in $cpp_opts
	1741	do
[82]	1742	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1743	then
	1744	cpp_options="${cpp_options},-D__$popts=__$popts"
	1745	else
	1746	cpp_options="$cpp_options -D__$popts"
	1747	fi
[1]	1748	done
	1749	fi
	1750
	1751	else
	1752
	1753
	1754	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1755	if [[ $do_remote = false ]]
	1756	then
	1757	if [[ ! -f $executable ]]
	1758	then
	1759	printf "\n +++ executable file: $executable"
	1760	printf "\n does not exist"
	1761	locat=executable; exit
	1762	fi
	1763	fi
	1764	fi
	1765
	1766
	1767	# JOBMODUS FESTSTELLEN
	1768	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1769	then
	1770	jobmo=BATCH
	1771	else
	1772	jobmo=INTERACTIVE
	1773	fi
	1774
	1775
	1776	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1777	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1778	if [[ "$compiler_name" = "" ]]
	1779	then
[82]	1780
	1781	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1782	locat=compiler_name; exit
	1783
[1]	1784	fi
	1785
	1786
	1787	# COMPILER AUF NECK UEBERSCHREIBEN
	1788	[[ $localhost = neck ]] && compiler_name=mpif90
	1789
	1790
	1791
	1792	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1793	kennung=$RANDOM
	1794	if [[ "$tmp_user_catalog" = "" ]]
	1795	then
	1796	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1797	then
	1798	tmp_user_catalog=$TMPDIR
	1799	elif [[ $localhost = nech ]]
	1800	then
	1801	tmp_user_catalog=$WRKSHR
	1802	else
	1803	tmp_user_catalog=/tmp
	1804	fi
	1805	fi
	1806	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1807
	1808
	1809	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1810	# BESTIMMEN
	1811	if [[ "$tmp_data_catalog" = "" ]]
	1812	then
	1813	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1814	then
	1815	tmp_data_catalog=$WORK/mrun_restart_data
	1816	elif [[ $localhost = nech ]]
	1817	then
	1818	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1819	else
	1820	tmp_data_catalog=/tmp/mrun_restart_data
	1821	fi
	1822	fi
	1823
	1824
	1825	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1826	# ERSETZEN
	1827	if [[ $do_remote = false && $do_compile = true ]]
	1828	then
	1829	eval fopts=\"$fopts\"
	1830	eval lopts=\"$lopts\"
	1831	fi
	1832
	1833
	1834
	1835	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1836	fopts="$fopts $netcdf_inc $dvrp_inc"
	1837	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1838	ROPTS="$ropts"
[179]	1839	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1840	then
	1841	XOPT="-X $numprocs"
	1842	fi
	1843
	1844
	1845
	1846	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1847	# GRAMM BENOETIGT
	1848	done=false
	1849	while [[ $done = false ]]
	1850	do
	1851	cputime=$cpumax
	1852	if (( $cputime == 0 ))
	1853	then
	1854	printf "\n +++ cpu-time is undefined"
	1855	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1856	printf "\n >>> "
	1857	read cputime 1>/dev/null 2>&1
	1858	else
	1859	done=true
	1860	fi
	1861	cpumax=$cputime
	1862	done
	1863
	1864	(( minuten = cputime / 60 ))
	1865	(( sekunden = cputime - minuten * 60 ))
	1866
	1867
	1868	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1869	if [[ $do_batch = true ]]
	1870	then
	1871	done=false
	1872	while [[ $done = false ]]
	1873	do
	1874	if (( memory == 0 ))
	1875	then
	1876	printf "\n +++ memory demand is undefined"
	1877	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1878	printf "\n >>> "
	1879	read memory 1>/dev/null 2>&1
	1880	else
	1881	done=true
	1882	fi
	1883	done
	1884	fi
	1885
	1886
	1887	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1888	if [[ $do_remote = true && -z $remote_username ]]
	1889	then
	1890	while [[ -z $remote_username ]]
	1891	do
	1892	printf "\n +++ username on remote host \"$host\" is undefined"
	1893	printf "\n >>> Please type username:"
	1894	printf "\n >>> "
	1895	read remote_username
	1896	done
	1897	mc="$mc -u$remote_username"
	1898	fi
	1899
	1900	###########################################################################
	1901	# HEADER-AUSGABE
	1902	###########################################################################
	1903
	1904
	1905	calltime=$(date)
	1906	printf "\n"
	1907	# [[ $silent = false ]] && clear
	1908	printf "#--------------------------------------------------------------# \n"
	1909	printf "\| $version$calltime \| \n"
	1910	printf "\| \| \n"
	1911	spalte1="called on:"; spalte2=$localhost_realname
	1912	printf "\| $spalte1$spalte2 \| \n"
	1913	if [[ $local_compile = false ]]
	1914	then
	1915	if [[ $do_remote = true ]]
	1916	then
	1917	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1918	else
	1919	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1920	fi
	1921	else
	1922	spalte1="compiling test only!"; spalte2=""
	1923	fi
	1924	printf "\| $spalte1$spalte2 \| \n"
	1925	if [[ -n $numprocs ]]
	1926	then
	1927	spalte1="number of PEs:"; spalte2=$numprocs
	1928	printf "\| $spalte1$spalte2 \| \n"
	1929	fi
	1930	if [[ -n $tasks_per_node ]]
	1931	then
	1932	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1933	printf "\| $spalte1$spalte2 \| \n"
	1934	fi
	1935	if [[ $threads_per_task != 1 ]]
	1936	then
	1937	spalte1="threads per task:"; spalte2="$threads_per_task"
	1938	printf "\| $spalte1$spalte2 \| \n"
	1939	fi
	1940	printf "\| \| \n"
	1941	if [[ $do_compile = true ]]
	1942	then
[82]	1943	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1944	printf "\| $spalte1$spalte2 \| \n"
[82]	1945	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1946	while [[ "$zeile" != "" ]]
	1947	do
	1948	spalte1=""
	1949	spalte2=$zeile
	1950	printf "\| $spalte1$spalte2 \| \n"
	1951	zeile=$(echo "$zeile" \| cut -c41-)
	1952	done
	1953
[82]	1954	spalte1=compiler-options:; spalte2="$fopts"
[1]	1955	printf "\| $spalte1$spalte2 \| \n"
[82]	1956	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1957	while [[ "$zeile" != "" ]]
	1958	do
	1959	spalte1=""
	1960	spalte2=$zeile
	1961	printf "\| $spalte1$spalte2 \| \n"
	1962	zeile=$(echo "$zeile" \| cut -c41-)
	1963	done
	1964
[82]	1965	spalte1=linker-options:; spalte2=$lopts
[1]	1966	printf "\| $spalte1$spalte2 \| \n"
[82]	1967	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1968	while [[ "$zeile" != "" ]]
	1969	do
	1970	spalte1=""
	1971	spalte2=$zeile
	1972	printf "\| $spalte1$spalte2 \| \n"
	1973	zeile=$(echo "$zeile" \| cut -c41-)
	1974	done
	1975
	1976	spalte1="main program":; spalte2=$mainprog
	1977	printf "\| $spalte1$spalte2 \| \n"
	1978	else
	1979	spalte1=executable:; spalte2=$executable
	1980	printf "\| $spalte1$spalte2 \| \n"
	1981	fi
	1982	printf "\| \| \n"
	1983	spalte1="base name of files":; spalte2=$fname
	1984	printf "\| $spalte1$spalte2 \| \n"
	1985	if [[ $fname != $afname ]]
	1986	then
	1987	spalte1="base name of input files":; spalte2=$afname
	1988	printf "\| $spalte1$spalte2 \| \n"
	1989	fi
	1990	spalte1="INPUT control list":; spalte2=$input_list
	1991	printf "\| $spalte1$spalte2 \| \n"
	1992	spalte1="OUTPUT control list":; spalte2=$output_list
	1993	printf "\| $spalte1$spalte2 \| \n"
	1994
	1995	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	1996	then
	1997	spalte1="memory demand / PE":; spalte2="$memory MB"
	1998	printf "\| $spalte1$spalte2 \| \n"
	1999	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2000	printf "\| $spalte1$spalte2 \| \n"
	2001	fi
	2002
	2003	if [[ $do_compile = true ]]
	2004	then
	2005	printf "\| \| \n"
	2006	printf "\| Files to be compiled: \| \n"
	2007	zeile=$source_list
	2008	while [[ "$zeile" != "" ]]
	2009	do
	2010	spalte3=$zeile
	2011	printf "\| $spalte3 \| \n"
	2012	zeile=$(echo "$zeile" \| cut -c61-)
	2013	done
	2014	fi
	2015	printf "#--------------------------------------------------------------#"
	2016
	2017
	2018
	2019	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2020	if [[ $do_trace = true ]]
	2021	then
	2022	(( i = 0 ))
	2023	while (( i < iin ))
	2024	do
	2025	(( i = i + 1 ))
	2026	if (( i == 1 ))
	2027	then
	2028	printf "\n\n >>> INPUT-file assignments:\n"
	2029	fi
	2030	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2031	done
	2032	(( i = 0 ))
	2033	while (( i < iout ))
	2034	do
	2035	(( i = i + 1 ))
	2036	if (( i == 1 ))
	2037	then
	2038	printf "\n\n >>> OUTPUT-file assignments:\n"
	2039	fi
	2040	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2041	done
	2042	(( i = 0 ))
	2043	while (( i < iic ))
	2044	do
	2045	(( i = i + 1 ))
	2046	if (( i == 1 ))
	2047	then
	2048	printf "\n\n >>> INPUT-commands:\n"
	2049	fi
	2050	printf "\n ${in_command[$i]}"
	2051	done
	2052	(( i = 0 ))
	2053	while (( i < ioc ))
	2054	do
	2055	(( i = i + 1 ))
	2056	if (( i == 1 ))
	2057	then
	2058	printf "\n\n >>> OUTPUT-commands:\n"
	2059	fi
	2060	printf "\n ${out_command[$i]}"
	2061	done
	2062	fi
	2063
	2064
	2065	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2066	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2067	then
	2068	antwort=dummy
	2069	printf "\n\n"
	2070	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2071	do
	2072	printf " >>> everything o.k. (y/n) ? "
	2073	read antwort
	2074	done
	2075	if [[ $antwort = n \|\| $antwort = N ]]
	2076	then
	2077	locat=user_abort; (( iec = 0 )); exit
	2078	fi
	2079	if [[ $do_batch = true ]]
	2080	then
	2081	printf " >>> batch-job will be created and submitted"
	2082	else
	2083	if [[ $local_compile = false ]]
	2084	then
	2085	printf " >>> MRUN will now continue to execute on this machine"
	2086	else
	2087	printf " >>> a test compilation will now be carried out on this machine"
	2088	fi
	2089	fi
	2090	fi
	2091
	2092
	2093
	2094
	2095	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2096	# CHENDE AKTIONEN DURCHGEFUEHRT
	2097	if [[ $do_batch = false ]]
	2098	then
	2099
	2100
	2101	# TEMPORAEREN KATALOG ERZEUGEN
	2102	mkdir -p $TEMPDIR
	2103	chmod go+rx $TEMPDIR
	2104	tmpcreate=true
	2105
	2106
	2107	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2108	# TEMPORAERES VERZEICHNIS KOPIEREN
	2109	if [[ $do_compile = true ]]
	2110	then
	2111
	2112	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2113	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2114	if [[ $localhost = nech ]]
	2115	then
	2116	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2117	if mkdir -p $TEMPDIR_COMPILE
	2118	then
	2119	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2120	printf "\n is generated as temporary directory for cross compiling\n"
	2121	else
	2122	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2123	printf "\n needed for cross compilation failed"
	2124	locat=compile
	2125	exit
	2126	fi
	2127	else
	2128	TEMPDIR_COMPILE=$TEMPDIR
	2129	fi
	2130
	2131
[82]	2132	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2133	line=""
	2134	grep "%depository_path" $config_file > tmp_mrun
	2135	while read line
	2136	do
	2137	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2138	then
	2139	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2140	then
[82]	2141	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2142	fi
[82]	2143	fi
	2144	done < tmp_mrun
[1]	2145
[82]	2146	line=""
	2147	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2148	while read line
	2149	do
	2150	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2151	then
[82]	2152	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2153	fi
[82]	2154	done < tmp_mrun
[1]	2155
[82]	2156	if [[ "$local_depository_path" = "" ]]
	2157	then
	2158	if [[ "$global_depository_path" != "" ]]
[1]	2159	then
[82]	2160	local_depository_path=$global_depository_path
[1]	2161	else
[82]	2162	printf "\n\n +++ no depository path found in configuration file"
	2163	printf "\n for local host \"$localhost\" "
	2164	printf "\n please set \"\%depository_path\" in configuration file\n"
	2165	locat=config_file; exit
[1]	2166	fi
[82]	2167	fi
	2168	eval local_depository_path=$local_depository_path
[1]	2169
[82]	2170	basename=`print $mainprog \| cut -f1 -d"."`
	2171	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2172	if [[ ! -f $make_depository ]]
	2173	then
	2174	printf "\n"
	2175	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2176	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2177	else
	2178	cp $make_depository $TEMPDIR_COMPILE
[1]	2179	cd $TEMPDIR_COMPILE
[82]	2180	tar -xf $make_depository > /dev/null 2>&1
[1]	2181	cd - > /dev/null
	2182	fi
[82]	2183
	2184	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2185
	2186	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2187	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2188	# MAKEFILE EINTRAGEN
	2189	cd $TEMPDIR_COMPILE
	2190	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2191	if [[ "$interface_file" != "" ]]
	2192	then
	2193	interface_file=`echo $interface_file \| cut -d"." -f1`
	2194	mv Makefile Makefile_old
	2195	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2196	fi
	2197	cd - > /dev/null
[1]	2198	else
	2199	cp $executable ${TEMPDIR}/a.out
	2200	fi
	2201
	2202
	2203	# WECHSEL IN TEMPORAEREN KATALOG
	2204	cd $TEMPDIR
	2205	printf "\n *** changed to temporary directory: $TEMPDIR"
	2206
	2207
	2208	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2209	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2210	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2211	# ERMITTELN
	2212	(( i = 0 ))
	2213	while (( i < iout ))
	2214	do
	2215	(( i = i + 1 ))
	2216	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2217	then
	2218	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2219	else
	2220	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2221	fi
	2222	done
	2223
	2224
	2225	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2226	if [[ $do_compile = true ]]
	2227	then
	2228
	2229
	2230	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2231	printf "\n\n\n *** compilation starts \n$striche\n"
	2232	printf " *** compilation with make using following options:\n"
	2233	printf " compilername: $compiler_name\n"
	2234	printf " options: $fopts\n"
	2235	printf " preprocessor-directives: $cpp_options \n"
	2236	printf " linker-options: $lopts \n"
	2237	printf " source code files: $source_list \n"
	2238
	2239	if [[ $localhost = nech ]]
[1]	2240	then
[82]	2241	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2242	cp $TEMPDIR_COMPILE/a.out .
	2243	[[ $? != 0 ]] && compile_error=true
	2244	rm -rf $TEMPDIR_COMPILE
[1]	2245	else
[118]	2246	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2247	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2248	fi
[1]	2249
	2250	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2251	then
	2252	printf "\n +++ error occured while compiling or linking"
	2253	locat=compile
[181]	2254
[182]	2255	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[181]	2256	if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2257	then
	2258	exit
[182]	2259	else
	2260	locat=normal
[181]	2261	fi
[1]	2262	else
	2263	printf "$striche\n *** compilation finished \n"
	2264	fi
	2265	fi
	2266
	2267
	2268	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2269	if [[ $local_compile = true ]]
	2270	then
	2271	cd $HOME
	2272	rm -rf $TEMPDIR
	2273	locat=local_compile; exit
	2274	fi
	2275
	2276
	2277	# BEREITSTELLEN DER INPUT-DATEIEN
	2278	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2279	(( i = 0 ))
	2280	while (( i < iin ))
	2281	do
	2282	(( i = i + 1 ))
	2283	if (( i == 1 ))
	2284	then
	2285	printf "\n\n *** providing INPUT-files:\n$striche"
	2286	fi
	2287
	2288
	2289	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2290	if [[ "${transin[$i]}" = unavailable ]]
	2291	then
	2292	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2293	then
	2294	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2295	printf "\n is not available!"
	2296	else
	2297	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2298	printf "\n is not available!"
	2299	fi
	2300	continue
	2301	fi
	2302
	2303	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2304	files_for_pes=false; datentyp=file
	2305	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2306	then
	2307	files_for_pes=true; datentyp=directory
	2308	actionin[$i]=""
	2309	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2310	then
	2311	actionin[$i]=""
	2312	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2313	then
	2314	files_for_pes=true; datentyp=directory
	2315	actionin[$i]="ar"
	2316	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2317	then
	2318	actionin[$i]="ar"
	2319	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2320	then
	2321	files_for_pes=true; datentyp=directory
	2322	actionin[$i]="fl"
	2323	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2324	then
	2325	actionin[$i]="fl"
	2326	fi
	2327
	2328	if [[ $files_for_pes = true ]]
	2329	then
	2330	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2331	else
	2332	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2333	fi
	2334
	2335	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2336	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2337	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2338	# SERVER ZU HOLEN
	2339	if [[ "${actionin[$i]}" = fl ]]
	2340	then
	2341	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2342	if [[ $files_for_pes = false ]]
	2343	then
	2344	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2345	then
	2346	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2347	got_tmp[$i]=true
	2348	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2349	then
	2350	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2351	printf "\n *** trying to use backup copy in \"$WORK\" "
	2352	cp $WORK/${frelin[$i]} ${localin[$i]}
	2353	else
	2354	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2355	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2356	printf "\n *** trying to get copy from archive"
	2357	actionin[$i]=ar
	2358	fi
	2359	else
	2360	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2361	then
	2362	mkdir ${localin[$i]}
[149]	2363	cd $tmp_data_catalog/${frelin[$i]}
	2364	for file in $(ls *)
	2365	do
	2366	ln $file $TEMPDIR/${localin[$i]}
	2367	done
	2368	cd $TEMPDIR
[1]	2369	got_tmp[$i]=true
	2370	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2371	then
	2372	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2373	printf "\n *** trying to use backup copy in \"$WORK\" "
	2374	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2375	else
	2376	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2377	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2378	printf "\n *** trying to get copy from archive"
	2379	actionin[$i]=ar
	2380	fi
	2381	fi
	2382	fi
	2383
	2384
	2385	# DATEI LIEGT AUF ARCHIV-SERVER
	2386	if [[ "${actionin[$i]}" = ar ]]
	2387	then
	2388
	2389	if [[ $files_for_pes = false ]]
	2390	then
	2391	printf "\n file will be restored from archive-system ($archive_system)!"
	2392	else
	2393	printf "\n directory will be restored from archive-system ($archive_system)!"
	2394	fi
	2395
	2396	file_restored=false
	2397
	2398	if [[ $archive_system = asterix ]]
	2399	then
	2400	do_stagein=true
	2401	(( stagein_anz = 0 ))
	2402	while [[ $do_stagein = true ]]
	2403	do
	2404	if [[ $files_for_pes = false ]]
	2405	then
	2406	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2407	else
	2408	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2409	fi
	2410	cat STAGEIN_OUTPUT
	2411	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2412	then
	2413	file_restored=true
	2414	do_stagein=false
	2415	else
	2416	(( stagein_anz = stagein_anz + 1 ))
	2417	if (( stagein_anz == 10 ))
	2418	then
	2419	printf "\n +++ stagein stoped after 10 tries"
	2420	locat=stage
	2421	exit
	2422	fi
	2423	printf "\n +++ restoring from archive failed, trying again:"
	2424	sleep 900
	2425	fi
	2426	done
	2427	elif [[ $archive_system = DMF ]]
	2428	then
	2429	if [[ $files_for_pes = false ]]
	2430	then
	2431	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2432	locat=DMF
	2433	exit
	2434	else
	2435	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2436	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2437	file_restored=true
	2438	fi
	2439	elif [[ $archive_system = tivoli ]]
	2440	then
	2441	if [[ $files_for_pes = false ]]
	2442	then
	2443	if [[ $localhost = ibmh ]]
	2444	then
	2445	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2446	else
	2447	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2448	fi
	2449	else
	2450	(( inode = 0 ))
	2451	while (( inode < nodes ))
	2452	do
	2453	if [[ $localhost = ibmh ]]
	2454	then
	2455	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2456	else
	2457	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2458	fi
	2459	(( inode = inode + 1 ))
	2460	done
	2461	fi
	2462	file_restored=true
	2463	elif [[ $archive_system = ut ]]
	2464	then
	2465	if [[ $files_for_pes = false ]]
	2466	then
	2467	cp $UT/${frelin[$i]} .
	2468	else
	2469	(( inode = 0 ))
	2470	while (( inode < nodes ))
	2471	do
	2472	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2473	(( inode = inode + 1 ))
	2474	done
	2475	fi
	2476	file_restored=true
	2477	else
	2478	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2479	locat=rearchive
	2480	exit
	2481	fi
	2482
	2483	if [[ $file_restored = true ]]
	2484	then
	2485
	2486	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2487	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2488	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2489	if [[ $files_for_pes = false ]]
	2490	then
	2491	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2492	else
	2493	mkdir $tmp_data_catalog/${frelin[$i]}
	2494	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2495	fi
	2496	got_tmp[$i]=true
	2497
	2498	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2499	mv ${frelin[$i]} ${localin[$i]}
	2500
	2501	fi
	2502	fi
	2503
	2504
	2505	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2506	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2507	then
	2508
	2509	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2510	then
	2511
	2512	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2513	printf "\n file will be provided for $numprocs processors"
	2514	mkdir ${localin[$i]}
	2515	ival=$numprocs
	2516	(( ii = 0 ))
	2517	while (( ii <= ival-1 ))
	2518	do
	2519	if (( ii < 10 ))
	2520	then
	2521	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2522	elif (( ii < 100 ))
	2523	then
	2524	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2525	elif (( ii < 1000 ))
	2526	then
	2527	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2528	else
	2529	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2530	fi
	2531	(( ii = ii + 1 ))
	2532	done
	2533
	2534	else
	2535
	2536	if [[ $files_for_pes = true ]]
	2537	then
	2538
	2539	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2540	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2541	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2542	# PER MOVE UMBENANNT WERDEN
	2543	printf "\n providing $numprocs files for the respective processors"
	2544	mkdir ${localin[$i]}
[183]	2545	if [[ $link_local_input = true ]]
	2546	then
	2547	printf " using ln -f\n"
	2548	cd ${absnamein[$i]}
	2549	for file in $(ls *)
	2550	do
	2551	ln -f $file ${localin[$i]}
	2552	done
	2553	cd $TEMPDIR
	2554	fi
	2555	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2556	if [[ ! -f "${localin[$i]}/_0000" ]]
	2557	then
	2558	if [[ $link_local_input = true ]]
	2559	then
	2560	printf " ln failed for .../_0000, using cp...\n"
	2561	fi
	2562	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2563	fi
[1]	2564
	2565	else
	2566	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2567	if [[ $link_local_input = true ]]
	2568	then
	2569	printf " using ln -f\n"
	2570	ln -f ${absnamein[$i]} ${localin[$i]}
	2571	fi
	2572	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2573	if [[ ! -f "${localin[$i]}" ]]
	2574	then
	2575	if [[ $link_local_input = true ]]
	2576	then
	2577	printf " ln failed, using cp...\n"
	2578	fi
	2579	cp ${absnamein[$i]} ${localin[$i]}
	2580	fi
[1]	2581	fi
	2582	fi
	2583	fi
	2584
	2585	done
	2586	if (( i != 0 ))
	2587	then
	2588	printf "\n$striche\n *** all INPUT-files provided \n"
	2589	fi
	2590
	2591
	2592	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2593	# LESEN VON PALM)
	2594	cat > ENVPAR << %%END%%
	2595	&envpar run_identifier = '$fname', host = '$localhost',
	2596	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2597	maximum_cpu_time_allowed = ${cpumax}.,
	2598	revision = '$global_revision' /
[1]	2599
	2600	%%END%%
	2601
	2602
	2603	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2604	(( i = 0 ))
	2605	while (( i < iic ))
	2606	do
	2607	(( i = i + 1 ))
	2608	if (( i == 1 ))
	2609	then
	2610	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2611	fi
	2612	printf "\n >>> ${in_command[$i]}"
	2613	eval ${in_command[$i]}
	2614	if (( i == iic ))
	2615	then
	2616	printf "\n$striche\n"
	2617	fi
	2618	done
	2619
	2620
	2621	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2622	cpurest=${cpumax}.
	2623
	2624
	2625	# PROGRAMMSTART
	2626	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2627	PATH=$PATH:$TEMPDIR
	2628
	2629	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2630	then
	2631	if [[ "$ENVIRONMENT" = BATCH ]]
	2632	then
	2633	printf "\n +++ debug is allowed in interactive mode only"
	2634	locat=debug
	2635	exit
	2636	fi
[5]	2637	if [[ $localhost = decalpha ]]
[1]	2638	then
	2639	dxladebug a.out
	2640	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2641	then
	2642
	2643	# SETUP THE IBM MPI ENVIRONMENT
	2644	export MP_SHARED_MEMORY=yes
	2645	export AIXTHREADS_SCOPE=S
	2646	export OMP_NUM_THREADS=$threads_per_task
	2647	export AUTHSTATE=files
	2648	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2649
	2650	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2651	export MP_ADAPTER_USE=shared
	2652	export MP_CPU_USE=multiple
	2653	export MP_TIMEOUT=1200
	2654
	2655	unset MP_TASK_AFFINITY
	2656
	2657	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2658	#(( ii = 1 ))
	2659	#while (( ii <= $numprocs ))
	2660	#do
	2661	# echo $localhost_realname >> hostfile
	2662	# (( ii = ii + 1 ))
	2663	#done
	2664	#export MP_HOSTFILE=hostfile
	2665
	2666	if [[ "$LOADLBATCH" = yes ]]
	2667	then
	2668	totalview poe a.out $ROPTS
	2669	else
	2670	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2671	export TVDSVRLAUNCHCMD=ssh
	2672	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2673	fi
	2674	else
	2675	printf "\n +++ no debug available on \"$localhost\" "
	2676	printf "\n or not implemented in mrun so far"
	2677	locat=debug
	2678	exit
	2679	fi
	2680	else
	2681	if [[ -n $numprocs ]]
	2682	then
	2683
	2684	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2685	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2686	then
	2687	# SETUP THE IBM MPI ENVIRONMENT
	2688	export MP_SHARED_MEMORY=yes
	2689	export AIXTHREAD_SCOPE=S
	2690	export OMP_NUM_THREADS=$threads_per_task
	2691	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2692	export AUTHSTATE=files
	2693	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2694	# export MP_PRINTENV=yes
	2695
	2696	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2697	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2698	export MP_WAIT_MODE=poll
	2699	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2700	# export MP_EAGER_LIMIT=65535
	2701
	2702	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2703	# export MPJ_MTAB=128
	2704	# export MPJ_ALLTOALL=1
	2705	# export MPJ_ALLTOALLV=1
	2706
	2707	if [[ "$LOADLBATCH" = yes ]]
	2708	then
	2709	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2710	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2711	then
[102]	2712	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2713	else
[102]	2714	poe ./a.out $ROPTS
[1]	2715	fi
	2716	else
	2717	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2718	then
[102]	2719	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2720	elif [[ $localhost = ibmy ]]
	2721	then
	2722	if [[ -f $hostfile ]]
	2723	then
	2724	cp $hostfile hostfile
	2725	else
	2726	(( ii = 1 ))
	2727	while (( ii <= $numprocs ))
	2728	do
	2729	echo $localhost_realname >> hostfile
	2730	(( ii = ii + 1 ))
	2731	done
	2732	fi
	2733	export MP_HOSTFILE=hostfile
[102]	2734	./a.out -procs $tasks_per_node $ROPTS
[1]	2735	else
	2736	if [[ "$host_file" = "" ]]
	2737	then
	2738	printf "\n +++ no hostfile given in configuration file"
	2739	locat=config_file
	2740	exit
	2741	else
	2742	eval host_file=$host_file
	2743	fi
	2744	export MP_HOSTFILE=$host_file
[102]	2745	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2746	fi
	2747	fi
	2748	elif [[ $host = nech \|\| $host = neck ]]
	2749	then
	2750	(( ii = nodes ))
	2751	if [[ $ii = 1 ]]
	2752	then
	2753	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2754	export MPIPROGINF=YES
[61]	2755	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2756	echo "*** execution on single node with mpirun"
[102]	2757	mpirun -np $numprocs ./a.out $ROPTS
[1]	2758	else
	2759	(( i = 0 ))
	2760	while (( i < ii ))
	2761	do
	2762	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2763	(( i = i + 1 ))
	2764	done
	2765
	2766	echo "#!/bin/sh" > mpi_exec_shell
	2767	echo " " >> mpi_exec_shell
	2768	echo "set -u" >> mpi_exec_shell
	2769	echo "F_ERRCNT=0" >> mpi_exec_shell
	2770	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2771	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2772	echo "cpurest=$cpurest" >> mpi_exec_shell
	2773	echo "fname=$fname" >> mpi_exec_shell
	2774	echo "localhost=$localhost" >> mpi_exec_shell
	2775	echo "return_addres=$return_addres" >> mpi_exec_shell
	2776	echo "return_username=$return_username" >> mpi_exec_shell
	2777	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2778	echo "write_binary=$write_binary" >> mpi_exec_shell
	2779	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2780	echo " " >> mpi_exec_shell
	2781	echo "export F_ERRCNT" >> mpi_exec_shell
	2782	echo "export MPIPROGINV" >> mpi_exec_shell
	2783	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2784	echo "export cpurest" >> mpi_exec_shell
	2785	echo "export fname" >> mpi_exec_shell
	2786	echo "export localhost" >> mpi_exec_shell
	2787	echo "export return_addres" >> mpi_exec_shell
	2788	echo "export return_username" >> mpi_exec_shell
	2789	echo "export tasks_per_node" >> mpi_exec_shell
	2790	echo "export write_binary" >> mpi_exec_shell
	2791	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2792	echo " " >> mpi_exec_shell
[102]	2793	echo "exec ./a.out" >> mpi_exec_shell
[1]	2794
	2795	chmod u+x mpi_exec_shell
	2796	export MPIPROGINF=YES
	2797	mpirun -f multinode_config &
	2798	wait
	2799
	2800	fi
[82]	2801	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2802	then
	2803
	2804	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2805	# DOES NOT EXIST
[179]	2806	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2807	then
[179]	2808	if [[ -f $hostfile ]]
	2809	then
	2810	cp $hostfile hostfile
	2811	else
	2812	(( ii = 1 ))
	2813	while (( ii <= $numprocs / $threads_per_task ))
	2814	do
	2815	echo $localhost_realname >> hostfile
	2816	(( ii = ii + 1 ))
	2817	done
	2818	fi
	2819	eval zeile=\"`head -n $ii hostfile`\"
	2820	printf "\n *** running on: $zeile"
[1]	2821	fi
[179]	2822
[1]	2823	(( ii = $numprocs / $threads_per_task ))
	2824	export OMP_NUM_THREADS=$threads_per_task
[179]	2825	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	2826	if [[ $threads_per_task != 1 ]]
	2827	then
	2828	printf "\n threads per task: $threads_per_task"
	2829	fi
[102]	2830	if [[ $run_coupled_model = false ]]
[1]	2831	then
[102]	2832	printf "\n\n"
[179]	2833	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	2834	then
[181]	2835	# mpirun -machinefile $PBS_NODEFILE -np $ii a.out $ROPTS
	2836	ulimit -s 30000
	2837	ulimit -a
[182]	2838	# mpirun_rsh -hostfile $PBS_NODEFILE -np $ii OMP_NUM_THREADS=$OMP_NUM_THREADS palm $ROPTS
	2839	export MV2_NUM_PORTS=2
[181]	2840	# export MV2_CPU_MAPPING=0:1:2:3
[182]	2841	mpiexec ./palm $ROPTS
[179]	2842	elif [[ $host = lcxt4 ]]
	2843	then
[164]	2844	aprun -n $ii -N $tasks_per_node a.out $ROPTS
	2845	else
[172]	2846	echo "no_coupling" > runfile_atmos
	2847	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	2848	fi
[1]	2849	else
[102]	2850	(( iii = ii / 2 ))
[164]	2851	echo "atmosphere_to_ocean" > runfile_atmos
	2852	echo "ocean_to_atmosphere" > runfile_ocean
	2853
[102]	2854	printf "\n coupled run ($iii atmosphere, $iii ocean)"
	2855	printf "\n\n"
[164]	2856
[188]	2857	if [[ $host = lcxt4 ]]
[164]	2858	then
	2859	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	2860	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	2861	else
	2862
	2863	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	2864	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
	2865	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
	2866	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	2867	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	2868	fi
[102]	2869	wait
[1]	2870	fi
[102]	2871
	2872	# if [[ $scirocco = true ]]
	2873	# then
	2874	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2875	# else
	2876	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	2877	# fi
	2878
[1]	2879	elif [[ $host = decalpha ]]
	2880	then
[102]	2881	dmpirun -np $numprocs a.out $ROPTS
[1]	2882	elif [[ $host = lctit ]]
	2883	then
	2884	export runfile=runfile.$kennung
	2885
	2886	echo "cd $PWD" > $runfile
	2887	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2888	echo "export cpurest=$cpurest" >> $runfile
	2889	echo "export fname=$fname" >> $runfile
	2890	echo "export localhost=$localhost" >> $runfile
	2891	echo "export return_addres=$return_addres" >> $runfile
	2892	echo "export return_username=$return_username" >> $runfile
	2893	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2894	echo "export write_binary=$write_binary" >> $runfile
	2895	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2896	echo "./a.out" >> $runfile
	2897	chmod u+x $runfile
	2898
	2899	if [[ "$QUEUE" = interactive ]]
	2900	then
[102]	2901	mpirun -np $numprocs a.out $ROPTS
[1]	2902	else
[127]	2903	(( mem_tsubame = $memory / 1024.0 ))
	2904	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	2905	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	2906	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	2907	fi
	2908
	2909	rm $runfile
	2910	else
[102]	2911	mpprun -n $numprocs a.out $ROPTS
[1]	2912	fi
	2913	[[ $? != 0 ]] && execution_error=true
	2914
	2915
	2916	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2917	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2918	then
	2919	apprentice
	2920	fi
	2921	else
[102]	2922	a.out $ROPTS
[1]	2923	fi
	2924	fi
	2925	if [[ $? != 0 \|\| $execution_error = true ]]
	2926	then
	2927
	2928	# ABBRUCH BEI LAUFZEITFEHLER
[102]	2929	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2930	printf "\n +++ runtime error occured"
	2931	locat=execution
	2932	exit
	2933	else
[102]	2934	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2935	printf "\n$striche\n *** execution finished \n"
	2936	fi
	2937
	2938
	2939
	2940	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2941	(( i = 0 ))
	2942	while (( i < ioc ))
	2943	do
	2944	(( i = i + 1 ))
	2945	if (( i == 1 ))
	2946	then
	2947	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2948	fi
	2949	printf "\n >>> ${out_command[$i]}"
	2950	eval ${out_command[$i]}
	2951	if (( i == ioc ))
	2952	then
	2953	printf "\n$striche\n"
	2954	fi
	2955	done
	2956
	2957
	2958	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2959	if [[ $do_trace = true ]]
	2960	then
	2961	printf "\n\n"
	2962	ls -al
	2963	fi
	2964
	2965
	2966
	2967	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2968	(( i = 0 ))
	2969	while (( i < iout ))
	2970	do
	2971	(( i = i + 1 ))
	2972	if (( i == 1 ))
	2973	then
	2974	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2975	fi
	2976
	2977	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2978	files_for_pes=false; filetyp=file
	2979	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2980	then
	2981	files_for_pes=true; filetyp=directory
	2982	actionout[$i]=""
	2983	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2984	then
	2985	actionout[$i]=""
	2986	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2987	then
	2988	files_for_pes=true; filetyp=directory
	2989	actionout[$i]="ar"
	2990	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2991	then
	2992	actionout[$i]="ar"
	2993	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2994	then
	2995	files_for_pes=true; filetyp=directory
	2996	actionout[$i]="fl"
	2997	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2998	then
	2999	actionout[$i]="fl"
	3000	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3001	then
	3002	files_for_pes=true; filetyp=directory
	3003	actionout[$i]="tr"
	3004	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3005	then
	3006	actionout[$i]="tr"
	3007	fi
	3008
	3009	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3010	then
	3011	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3012	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3013	then
	3014	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3015	else
	3016
	3017
	3018	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3019	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3020	# REMOTE-RECHNUNGEN
	3021	if [[ "${actionout[$i]}" = tr ]]
	3022	then
	3023	if [[ $localhost != $fromhost ]]
	3024	then
	3025	if [[ $files_for_pes = false ]]
	3026	then
	3027	cps=""
	3028	cst=""
	3029	else
	3030	cps=-c
	3031	cst="/"
	3032	fi
	3033	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3034	then
	3035
	3036	# TRANSFER IN EIGENSTAENDIGEM JOB
	3037	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3038	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3039	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3040	if [[ $files_for_pes = false ]]
	3041	then
	3042	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3043	else
	3044	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3045	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3046	fi
	3047
	3048	echo "set -x" > transfer_${localout[$i]}
	3049	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3050
	3051	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3052	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3053	printf "\n or higher cycle\n"
	3054	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3055
[1]	3056	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3057
	3058	if [[ $localhost = nech ]]
	3059	then
[82]	3060	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3061	else
	3062	if [[ "$LOGNAME" = b323013 ]]
	3063	then
[164]	3064	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3065	else
[164]	3066	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3067	fi
	3068	fi
	3069
	3070	else
	3071
	3072	# TRANSFER INNERHALB DIESES JOBS
	3073	transfer_failed=false
[82]	3074	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3075	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3076	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3077	[[ $? != 0 ]] && transfer_failed=true
[1]	3078
	3079	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3080	# LOKALER MASCHINE ANLEGEN
	3081	if [[ $transfer_failed = true ]]
	3082	then
	3083	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3084	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3085
	3086	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3087	# ANLEGEN.
	3088	eval local_catalog=${pathout[$i]}
	3089	if [[ ! -d $local_catalog ]]
	3090	then
	3091	printf " *** local directory does not exist. Trying to create:\n"
	3092	printf " $local_catalog \n"
	3093	mkdir -p $local_catalog
	3094	fi
	3095	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3096	transfer_problems=true
	3097	fi
	3098	fi
	3099	else
	3100
	3101	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3102	actionout[$i]=""
	3103	fi
	3104	fi
	3105
	3106
	3107	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3108	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3109	# REMOTE-RECHNUNGEN
	3110	if [[ "${actionout[$i]}" = tra ]]
	3111	then
	3112	if [[ $localhost != $fromhost ]]
	3113	then
	3114	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3115	then
	3116
	3117	# TRANSFER IN EIGENSTAENDIGEM JOB
	3118	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3119	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3120	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3121	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3122
	3123	echo "set -x" > transfer_${localout[$i]}
	3124	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3125
	3126	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3127	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3128	printf "\n or higher cycle\n"
	3129	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3130
[1]	3131	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3132
	3133	if [[ $localhost = nech ]]
	3134	then
[82]	3135	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3136	else
	3137	if [[ $LOGNAME = b323013 ]]
	3138	then
[164]	3139	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3140	else
[164]	3141	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3142	fi
	3143	fi
	3144
	3145	else
	3146
	3147	# TRANSFER INNERHALB DIESES JOBS
	3148	transfer_failed=false
[82]	3149	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3150	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3151	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3152	[[ $? != 0 ]] && transfer_failed=true
[1]	3153
	3154	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3155	# LOKALER MASCHINE ANLEGEN
	3156	if [[ $transfer_failed = true ]]
	3157	then
	3158	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3159	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3160
	3161	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3162	# ANLEGEN
	3163	eval local_catalog=${pathout[$i]}
	3164	if [[ ! -d $local_catalog ]]
	3165	then
	3166	printf " *** local directory does not exist. Trying to create:\n"
	3167	printf " $local_catalog \n"
	3168	mkdir -p $local_catalog
	3169	fi
	3170
	3171	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3172	transfer_problems=true
	3173	fi
	3174	fi
	3175	else
	3176
	3177	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3178	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3179	actionout[$i]=a
	3180	fi
	3181	fi
	3182
	3183
	3184	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3185	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3186	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3187	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3188	if [[ "${actionout[$i]}" = fl ]]
	3189	then
	3190	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3191	chmod g+rx $tmp_data_catalog
	3192	if [[ $files_for_pes = false ]]
	3193	then
	3194	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3195	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3196	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3197	else
	3198	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3199	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3200	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3201	cd ${localout[$i]}
	3202	for file in $(ls *)
	3203	do
	3204	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3205	done
	3206	cd $TEMPDIR
[1]	3207	fi
	3208
	3209
	3210	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3211	if [[ $store_on_archive_system = true ]]
	3212	then
	3213
	3214	if [[ $archive_system = asterix ]]
	3215	then
	3216	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3217	if [[ $files_for_pes = false ]]
	3218	then
	3219	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3220	else
	3221	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3222	fi
	3223	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3224	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3225	echo "then" >> archive_${frelout[$i]}
	3226	echo " do_stageout=false" >> archive_${frelout[$i]}
	3227	echo "else" >> archive_${frelout[$i]}
	3228	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3229	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3230	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3231	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3232	if [[ $files_for_pes = false ]]
	3233	then
	3234	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3235	else
	3236	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3237	fi
	3238	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3239	echo "fi" >> archive_${frelout[$i]}
	3240	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3241	elif [[ $archive_system = DMF ]]
	3242	then
	3243	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3244	if [[ $files_for_pes = false ]]
	3245	then
	3246	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3247	locat=DMF
	3248	exit
	3249	else
	3250	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3251	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3252	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3253	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3254	fi
	3255	elif [[ $archive_system = tivoli ]]
	3256	then
	3257	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3258	if [[ $files_for_pes = false ]]
	3259	then
	3260	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3261	echo "set -x" >> archive_${frelout[$i]}
	3262	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3263	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3264	else
	3265
	3266	echo "set -x" >> archive_${frelout[$i]}
	3267	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3268	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3269	cd $tmp_data_catalog
	3270	all_files=`ls -1 ${frelout[$i]}/*`
	3271	cd - > /dev/null
	3272	(( inode = 0 ))
	3273	(( tp1 = tasks_per_node + 1 ))
	3274	while (( inode < nodes ))
	3275	do
	3276	# echo "*** all_files = \"$all_files\" "
	3277	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3278	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3279	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3280	# echo "*** files = \"$files\" "
	3281	# echo "*** all_files = \"$all_files\" "
	3282	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3283	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3284	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3285	(( inode = inode + 1 ))
	3286	done
	3287	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3288	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3289	fi
	3290	elif [[ $archive_system = ut ]]
	3291	then
	3292	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3293	if [[ $files_for_pes = false ]]
	3294	then
	3295	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3296	echo "set -x" >> archive_${frelout[$i]}
	3297	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3298	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3299	else
	3300
	3301	echo "set -x" >> archive_${frelout[$i]}
	3302	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3303	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3304	cd $tmp_data_catalog
	3305	all_files=`ls -1 ${frelout[$i]}/*`
	3306	cd - > /dev/null
	3307	(( inode = 0 ))
	3308	(( tp1 = tasks_per_node + 1 ))
	3309	while (( inode < nodes ))
	3310	do
	3311	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3312	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3313	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3314	(( inode = inode + 1 ))
	3315	done
	3316	fi
	3317	elif [[ $archive_system = none ]]
	3318	then
	3319	printf " +++ archiving on $localhost not available!\n"
	3320	fi
	3321
	3322	if [[ $archive_system != none ]]
	3323	then
	3324	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3325	then
[164]	3326	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3327	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3328	elif [[ $localhost = nech ]]
	3329	then
[82]	3330	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3331	fi
	3332	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3333	fi
	3334	else
	3335	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3336	fi
	3337
	3338
	3339	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3340	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3341	if [[ $files_for_pes = false ]]
	3342	then
	3343	cat /dev/null > ${pathout[$i]}
	3344	else
	3345	mkdir -p ${pathout[$i]}
	3346	fi
	3347
	3348	fi
	3349
	3350
	3351	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3352	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3353	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3354	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3355	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3356	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3357	if [[ "${actionout[$i]}" = ar ]]
	3358	then
	3359	if [[ $files_for_pes = false ]]
	3360	then
	3361	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3362	printf "\n ${pathout[$i]}"
	3363	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3364	else
	3365	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3366	printf "\n ${pathout[$i]}"
	3367	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3368	fi
	3369	mv ${localout[$i]} ${frelout[$i]}
	3370
	3371	file_saved=false
	3372
	3373	if [[ $archive_system = asterix ]]
	3374	then
	3375	do_stageout=true
	3376	(( stageout_anz = 0 ))
	3377	while [[ $do_stageout = true ]]
	3378	do
	3379	if [[ $files_for_pes = false ]]
	3380	then
	3381	stageout ${frelout[$i]} > STAGE_OUTPUT
	3382	else
	3383	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3384	fi
	3385	cat STAGE_OUTPUT
	3386	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3387	then
	3388	file_saved=true
	3389	do_stageout=false
	3390	else
	3391	if [[ $files_for_pes = false ]]
	3392	then
	3393	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3394	else
	3395	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3396	fi
	3397	(( stageout_anz = stageout_anz + 1 ))
	3398	if (( stageout_anz == 10 ))
	3399	then
	3400	printf "\n +++ stoped after 10 unsuccessful tries!"
	3401	archive_save=false
	3402	do_stageout=false
	3403	else
	3404	printf "\n *** new try to store on archive after 15 min:"
	3405	sleep 900
	3406	fi
	3407	fi
	3408	done
	3409	elif [[ $archive_system = DMF ]]
	3410	then
	3411	if [[ $files_for_pes = false ]]
	3412	then
	3413	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3414	locat=DMF
	3415	exit
	3416	else
	3417	rm -rf $ARCHIVE/${frelout[$i]}
	3418	cp -r ${frelout[$i]} $ARCHIVE
	3419	fi
	3420	file_saved=true
	3421	elif [[ $archive_system = tivoli ]]
	3422	then
	3423	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3424	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3425	# GELEGT WERDEN
	3426	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3427	chmod g+rx $tmp_data_catalog
	3428	if [[ $files_for_pes = false ]]
	3429	then
	3430	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3431	else
	3432	mkdir $tmp_data_catalog/${frelout[$i]}
	3433	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3434	fi
	3435
	3436	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3437	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3438	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3439	if [[ $files_for_pes = false ]]
	3440	then
	3441	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3442	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3443	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3444	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3445	else
	3446	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3447	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3448	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3449	fi
	3450
[164]	3451	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3452	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3453	file_saved=true
	3454
	3455	elif [[ $archive_system = ut ]]
	3456	then
	3457	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3458	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3459	# GELEGT WERDEN
	3460	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3461	chmod g+rx $tmp_data_catalog
	3462	if [[ $files_for_pes = false ]]
	3463	then
	3464	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3465	else
	3466	mkdir $tmp_data_catalog/${frelout[$i]}
	3467	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3468	fi
	3469
	3470	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3471	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3472	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3473	if [[ $files_for_pes = false ]]
	3474	then
	3475	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3476	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3477	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3478	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3479	else
	3480	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3481	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3482	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3483	fi
	3484
[82]	3485	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3486	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3487	file_saved=true
	3488
	3489	else
	3490	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3491	archive_save=false
	3492	fi
	3493	if [[ $file_saved = true ]]
	3494	then
	3495	if [[ $files_for_pes = false ]]
	3496	then
	3497	cat /dev/null > ${pathout[$i]}
	3498	else
	3499	mkdir -p ${pathout[$i]}
	3500	fi
	3501	fi
	3502	fi
	3503
	3504	# APPEND AUF LOKALER MASCHINE
	3505	if [[ "${actionout[$i]}" = "a" ]]
	3506	then
	3507	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3508	cat ${localout[$i]} >> ${pathout[$i]}
	3509	fi
	3510
	3511	# KOPIEREN AUF LOKALER MASCHINE
	3512	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3513	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3514	then
	3515
	3516	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3517	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3518	then
	3519	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3520	if [[ $link_local_output = true ]]
	3521	then
	3522	printf " using ln -f\n"
	3523	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3524	fi
	3525	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3526	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3527	then
	3528	if [[ $link_local_output = true ]]
	3529	then
	3530	printf " ln failed, using cp...\n"
	3531	fi
	3532	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3533	fi
[1]	3534	else
	3535	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3536	if [[ $link_local_output = true ]]
	3537	then
	3538	printf " using ln -f\n"
	3539	ln -f ${localout[$i]} ${pathout[$i]}
	3540	fi
	3541	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3542	if [[ ! -f "${pathout[$i]}" ]]
	3543	then
	3544	if [[ $link_local_output = true ]]
	3545	then
	3546	printf " ln failed, using cp...\n"
	3547	fi
	3548	cp ${localout[$i]} ${pathout[$i]}
	3549	fi
[1]	3550	fi
	3551
	3552	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3553	then
	3554
	3555	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3556	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3557	# WIRD DANN KOPIERT
	3558	# PER MOVE UMBENANNT WERDEN
	3559	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3560	if [[ $link_local_output = true ]]
	3561	then
	3562	printf " using ln -f\n"
	3563	mkdir ${pathout[$i]}
	3564	cd ${localout[$i]}
	3565	for file in $(ls *)
	3566	do
	3567	ln -f $file ${pathout[$i]}
	3568	done
	3569	cd $TEMPDIR
	3570	fi
	3571	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3572	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3573	then
	3574	if [[ $link_local_output = true ]]
	3575	then
	3576	printf " ln failed for .../_0000, using cp...\n"
	3577	fi
	3578	cp -r ${localout[$i]} ${pathout[$i]}
	3579	fi
[1]	3580
	3581	fi
	3582	fi
	3583	done
	3584	if (( i != 0 ))
	3585	then
	3586	if [[ $transfer_problems = true ]]
	3587	then
	3588	printf "\n$striche\n *** OUTPUT-files saved"
	3589	printf "\n +++ WARNING: some data transfers failed! \n"
	3590	else
	3591	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3592	fi
	3593	fi
	3594
	3595
	3596	# EVENTUELL FOLGEJOB STARTEN
	3597	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3598	if [[ -f CONTINUE_RUN ]]
	3599	then
	3600
	3601	if [[ $archive_save = true ]]
	3602	then
	3603
	3604	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3605	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3606	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3607	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3608	# HANDEN
	3609	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3610	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3611	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3612	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3613	then
	3614	mc=`echo $mc \| sed 's/#/f/g'`
	3615	fi
	3616
	3617
	3618	# JOB STARTEN
	3619	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3620	echo " $mc"
	3621	printf "\n$striche\n"
	3622	if [[ $localhost != $fromhost ]]
	3623	then
	3624
	3625	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3626	then
	3627	echo "*** ssh will be used to initiate restart-runs!"
	3628	echo " return_addres=\"$return_addres\" "
	3629	echo " return_username=\"$return_username\" "
	3630	if [[ $return_addres = 172.20.25.41 ]]
	3631	then
	3632	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3633	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3634	else
[33]	3635	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3636	fi
	3637	else
	3638	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3639	locat=restart; exit
	3640	fi
	3641
	3642	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3643	# DER AKTUELLE JOB ENDET
	3644	sleep 30
	3645
	3646	else
	3647
	3648	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3649	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3650	cd $LOCAL_PWD
[108]	3651	if [[ $localhost = lcfimm ]]
	3652	then
	3653	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3654	else
	3655	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3656	fi
[1]	3657	cd - > /dev/null
	3658	fi
	3659	printf "\n$striche\n *** restart-run initiated \n"
	3660
	3661
	3662	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3663	# GEHOLT WORDEN SIND, LOESCHEN
	3664	(( i = 0 ))
	3665	while (( i < iin ))
	3666	do
	3667	(( i = i + 1 ))
	3668	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3669	then
	3670	rm -r $tmp_data_catalog/${frelin[$i]}
	3671	fi
	3672	done
	3673
	3674	else
	3675
	3676	printf "\n +++ no restart-run possible, since errors occured"
	3677	printf "\n during the archive process"
	3678	fi
	3679
	3680	fi
	3681
	3682
	3683
	3684	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3685	if [[ "$email_notification" != "" ]]
	3686	then
	3687
	3688	if [[ $localhost != $fromhost ]]
	3689	then
	3690	if [[ -f CONTINUE_RUN ]]
	3691	then
	3692	echo "PALM restart run necessary" > email_text
	3693	echo "description header of actual run:" >> email_text
	3694	cat CONTINUE_RUN >> email_text
	3695	echo "mrun-command to restart:" >> email_text
	3696	echo "$mc" >> email_text
	3697	else
	3698	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3699	fi
	3700	mail $email_notification < email_text
	3701	printf "\n *** email notification sent to \"$email_notification\" "
	3702	fi
	3703	fi
	3704
	3705
	3706
	3707	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3708	cd $HOME
	3709	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3710
	3711	else
	3712
	3713
	3714	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3715	# CHENDE AKTIONEN DURCHGEFUEHRT
	3716
	3717	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3718	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3719	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3720	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3721	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3722	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3723	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3724	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3725	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3726	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3727	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3728	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3729	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3730	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3731	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3732	if [[ $use_openmp = true ]]
	3733	then
	3734	mrun_com=${mrun_com}" -O"
	3735	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3736	else
	3737	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3738	fi
	3739	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3740	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3741	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3742	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3743	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[102]	3744	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
[1]	3745	if [[ $do_remote = true ]]
	3746	then
	3747	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3748	fi
	3749
	3750
	3751	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3752	jobfile=jobfile.$RANDOM
	3753
	3754
	3755	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3756	echo "mkdir $TEMPDIR" >> $jobfile
	3757	echo "cd $TEMPDIR" >> $jobfile
	3758
	3759
	3760	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3761	if [[ $do_trace = true ]]
	3762	then
	3763	echo "set -x" >> $jobfile
	3764	else
	3765	echo "set +vx" >> $jobfile
	3766	fi
	3767
	3768
	3769	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3770	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3771	if [[ $do_compile = true ]]
	3772	then
	3773
	3774	source_catalog=SOURCES_FOR_RUN_$fname
	3775
	3776	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3777	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3778	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3779	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3780	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3781	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3782
	3783	for filename in $source_list
	3784	do
	3785	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3786	echo "cat > $filename << \"%END%\"" >> $jobfile
	3787	cat $source_catalog/$filename >> $jobfile
	3788	echo " " >> $jobfile
	3789	echo "%END%" >> $jobfile
	3790	echo " " >> $jobfile
	3791	done
	3792
[82]	3793	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3794	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3795	cat $source_catalog/Makefile >> $jobfile
	3796	echo " " >> $jobfile
	3797	echo "%END%" >> $jobfile
	3798	echo " " >> $jobfile
[1]	3799
	3800	echo "cd - > /dev/null" >> $jobfile
	3801
	3802	fi
	3803
	3804
	3805	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3806	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3807	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3808	cat $config_file >> $jobfile
	3809	echo "%END%" >> $jobfile
	3810	echo " " >> $jobfile
	3811
	3812
	3813	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3814	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3815	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3816	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3817	echo "%END%" >> $jobfile
	3818	if [[ $host = lctit ]]
	3819	then
	3820	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3821	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3822	fi
	3823	echo "chmod u+x $mrun_script_name" >> $jobfile
	3824	echo "execute_mrun=true" >> $jobfile
	3825	echo " " >> $jobfile
	3826
	3827	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3828	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3829	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3830	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3831	if [[ $do_remote = true ]]
	3832	then
	3833	(( i = 0 ))
	3834	while (( i < iin ))
	3835	do
	3836	(( i = i + 1 ))
	3837	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3838	if [[ "${transin[$i]}" = job ]]
	3839	then
	3840	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3841	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3842	echo " " >> $jobfile
	3843	echo "%END%" >> $jobfile
	3844	else
[82]	3845	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3846	fi
	3847
	3848	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3849	echo "if [[ \$? = 1 ]]" >> $jobfile
	3850	echo "then" >> $jobfile
	3851	echo " echo \" \" " >> $jobfile
	3852	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3853	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3854	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3855	echo " execute_mrun=false" >> $jobfile
	3856	echo "fi" >> $jobfile
	3857	done
	3858	fi
	3859
	3860	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3861	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3862	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3863	echo "export LOCAL_PWD" >> $jobfile
	3864
	3865	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3866	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3867	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3868
[66]	3869	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3870	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3871	then
	3872	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3873	fi
[1]	3874
	3875	# MRUN AUF ZIELRECHNER AUFRUFEN
	3876	echo "set -x" >> $jobfile
	3877	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3878
	3879	echo 'ls -al; echo `pwd`' >> $jobfile
	3880	echo "cd \$HOME" >> $jobfile
	3881	echo "rm -rf $TEMPDIR" >> $jobfile
	3882
	3883
	3884
	3885
	3886	# JOB PER SUBJOB STARTEN
	3887	if [[ $silent = false ]]
	3888	then
	3889	printf "\n "
	3890	else
	3891	printf "\n\n"
	3892	fi
	3893
[164]	3894	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	3895	rm -rf $jobfile
	3896
	3897
	3898	fi # ENDE REMOTE-TEIL
	3899
	3900
	3901
	3902	# ENDE DER PROZEDUR

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