source: palm/trunk/SCRIPTS/.mrun.config.riam @ 255

Last change on this file since 255 was 255, checked in by raasch, 13 years ago

in default configuration files, TOPOGRAPHY_DATA is also copied in case d3f

File size: 7.7 KB
Line 
1#column 1          column 2                                   column 3
2#name of variable  value of variable (~ must not be used)     scope
3#----------------------------------------------------------------------------
4%mainprog          palm.f90
5%base_directory    $HOME/palm/current_version
6%base_data         ~/palm/current_version/JOBS
7%source_path       $base_directory/trunk/SOURCE
8%add_source_path   $base_directory/USER_CODE/$fname
9%depository_path   $base_directory/MAKE_DEPOSITORY
10%use_makefile      true
11#
12# Enter your own host below by adding another line containing in the second
13# column your hostname (as provided by the unix command "hostname") and in the
14# third column the host identifier. Depending on your operating system, the
15# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
16# (IBM-AIX), or "nec" (NEC-SX), respectively.
17#
18# The next line is just an example. Add your own line below or replace this line.
19%host_identifier   sx-*                                       necriam
20#
21#
22# The next block contains all informations for compiling the PALM code
23# and for generating and running the PALM executable using MPI. Replace all
24# required paths (given in <>) by the respective paths valid on your host.
25# Also replace <hi> by your host identifier (see above) in each line!
26# Compilernames, cpp-options and compiler-options are assuming
27# an Intel-Compiler and mpich2 on this host! Please change
28# appropriately, if you are using a different compiler / MPI-Version.
29#
30#
31%compiler_name     sxmpif90                                   necriam parallel
32%compiler_name_ser sxf90                                      necriam parallel
33%cpp_options       -Ep:-D__mpi2:-DMPI_REAL=MPI_REAL8:-DMPI_2REAL=MPI_2REAL8:-DSCFFT=DZFFT:-DCSFFT=ZDFFT:-D__netcdf:-D__netcdf_64bit  necriam parallel
34%netcdf_inc        -I:/home/COAR/NC/tatuyama/pub/netcdf-3.6.0-p1/include      necriam parallel
35%netcdf_lib        -L/home/COAR/NC/tatuyama/pub/netcdf-3.6.0-p1/lib:-lnetcdf  necriam parallel
36%fopts             -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4:-pvctl:fullmsg\':-ftrace:-P:stack:-pi:auto:-pi:line=1000  necriam parallel
37%lopts             -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4\':-ftrace:-P:stack:-pi:auto:-pi:line=1000:-L/SX/opt/mathkeisan/MK3_0/lib0/:-l:fft  necriam parallel
38%memory            4000                                       necriam parallel
39%cpumax            1000                                       necriam parallel
40%numprocs          4                                          necriam parallel
41%tmp_data_catalog  /work/<replace by your username>/restart_data  necriam parallel
42%tmp_user_catalog  /work/<replace by your username>               necriam parallel
43%remote_username   <replace by your username>                     necriam parallel
44#
45%write_binary                true                             restart
46#
47#----------------------------------------------------------------------------
48# INPUT-commands, executed before running PALM - lines must start with "IC:"
49#----------------------------------------------------------------------------
50#IC:
51#
52#----------------------------------------------------------------------------
53# ERROR-commands - executed when program terminates abnormally
54#----------------------------------------------------------------------------
55EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
56EC:pwd; ls -al
57#
58#----------------------------------------------------------------------------
59# OUTPUT-commands - executed when program terminates normally
60#----------------------------------------------------------------------------
61#
62# Combine 1D- and 3D-profile output (these files are not usable for plotting)
63OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
64OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
65#
66# Combine all particle information files
67OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
68#
69# Collect plot data (2d/3d) into one file
70OC:combine_plot_fields.x
71#
72#----------------------------------------------------------------------------
73# List of input-files
74#----------------------------------------------------------------------------
75PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
76PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
77TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
78BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
79PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
80DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
81DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
82DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
83DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
84DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
85DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
86DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
87DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
88DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
89DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
90#
91#----------------------------------------------------------------------------
92# List of output-files
93#----------------------------------------------------------------------------
94BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
95PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
96#
97RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
98RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
99HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
100HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
101CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
102CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
103#
104DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
105DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
106DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
107DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
108DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
109DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
110DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
111DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
112DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
113DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
114DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
115DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
116DATA_PRT_NETCDF      out:loc:pe   prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
117DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
118#
119DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
120DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
121PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
122PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
123PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
124
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