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source: palm/trunk/SCRIPTS/.mrun.config.riam @ 789

Last change on this file since 789 was 410, checked in by letzel, 15 years ago
  • reintegrate branch letzel/masked_output into trunk; new funtionality: masked data output (not yet documented)
File size: 11.1 KB
RevLine 
[251]1#column 1          column 2                                   column 3
2#name of variable  value of variable (~ must not be used)     scope
3#----------------------------------------------------------------------------
4%mainprog          palm.f90
5%base_directory    $HOME/palm/current_version
6%base_data         ~/palm/current_version/JOBS
7%source_path       $base_directory/trunk/SOURCE
8%add_source_path   $base_directory/USER_CODE/$fname
9%depository_path   $base_directory/MAKE_DEPOSITORY
10%use_makefile      true
11#
12# Enter your own host below by adding another line containing in the second
13# column your hostname (as provided by the unix command "hostname") and in the
14# third column the host identifier. Depending on your operating system, the
15# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
16# (IBM-AIX), or "nec" (NEC-SX), respectively.
17#
18# The next line is just an example. Add your own line below or replace this line.
19%host_identifier   sx-*                                       necriam
20#
21#
22# The next block contains all informations for compiling the PALM code
23# and for generating and running the PALM executable using MPI. Replace all
24# required paths (given in <>) by the respective paths valid on your host.
25# Also replace <hi> by your host identifier (see above) in each line!
26# Compilernames, cpp-options and compiler-options are assuming
27# an Intel-Compiler and mpich2 on this host! Please change
28# appropriately, if you are using a different compiler / MPI-Version.
29#
30#
31%compiler_name     sxmpif90                                   necriam parallel
32%compiler_name_ser sxf90                                      necriam parallel
33%cpp_options       -Ep:-D__mpi2:-DMPI_REAL=MPI_REAL8:-DMPI_2REAL=MPI_2REAL8:-DSCFFT=DZFFT:-DCSFFT=ZDFFT:-D__netcdf:-D__netcdf_64bit  necriam parallel
34%netcdf_inc        -I:/home/COAR/NC/tatuyama/pub/netcdf-3.6.0-p1/include      necriam parallel
35%netcdf_lib        -L/home/COAR/NC/tatuyama/pub/netcdf-3.6.0-p1/lib:-lnetcdf  necriam parallel
[273]36%dvr_inc           -I:/home/COAR/NC/raasch/dvr/lib           necriam parallel
37%dvr_lib           -L/home/COAR/NC/raasch/dvr/lib:-lDVRP2:-lftp  necriam parallel
[251]38%fopts             -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4:-pvctl:fullmsg\':-ftrace:-P:stack:-pi:auto:-pi:line=1000  necriam parallel
39%lopts             -C:hopt:-Wf:\'-init:stack=nan:-init:heap=nan:-A:idbl4\':-ftrace:-P:stack:-pi:auto:-pi:line=1000:-L/SX/opt/mathkeisan/MK3_0/lib0/:-l:fft  necriam parallel
40%memory            4000                                       necriam parallel
41%cpumax            1000                                       necriam parallel
42%numprocs          4                                          necriam parallel
43%tmp_data_catalog  /work/<replace by your username>/restart_data  necriam parallel
44%tmp_user_catalog  /work/<replace by your username>               necriam parallel
45%remote_username   <replace by your username>                     necriam parallel
46#
47%write_binary                true                             restart
48#
49#----------------------------------------------------------------------------
50# INPUT-commands, executed before running PALM - lines must start with "IC:"
51#----------------------------------------------------------------------------
52#IC:
53#
54#----------------------------------------------------------------------------
55# ERROR-commands - executed when program terminates abnormally
56#----------------------------------------------------------------------------
57EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
58EC:pwd; ls -al
59#
60#----------------------------------------------------------------------------
61# OUTPUT-commands - executed when program terminates normally
62#----------------------------------------------------------------------------
63#
64# Combine 1D- and 3D-profile output (these files are not usable for plotting)
65OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
66OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
67#
68# Combine all particle information files
69OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
70#
71# Collect plot data (2d/3d) into one file
72OC:combine_plot_fields.x
73#
74#----------------------------------------------------------------------------
75# List of input-files
76#----------------------------------------------------------------------------
[255]77PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
78PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
79TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
80BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
81PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
82DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
83DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
84DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
85DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
86DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
87DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
88DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
89DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
90DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
91DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
[251]92#
93#----------------------------------------------------------------------------
94# List of output-files
95#----------------------------------------------------------------------------
96BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
97PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
98#
99RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
100RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
101HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
102HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
103CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
104CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
105#
106DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
107DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
108DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
109DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
110DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
111DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
112DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
113DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
114DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
115DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
116DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
117DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
[410]118DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
119DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
120DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
121DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
122DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
123DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
124DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
125DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
126DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
127DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
128DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
129DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
130DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
131DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
132DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
133DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
134DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
135DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
136DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
137DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
138DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
139DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
140DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
141DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
142DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
143DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
144DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
145DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
146DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
147DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
148DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
149DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
150DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
151DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
152DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
153DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
154DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
155DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
156DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
157DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
[251]158DATA_PRT_NETCDF      out:loc:pe   prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
159DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
[272]160DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
[251]161#
162DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
163DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
164PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
165PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
166PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
167
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