1 | #$Id: .mrun.config.yonsei2011 998 2012-09-11 09:44:06Z knoop $ |
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2 | # recommended settings for Department of Atmospheric Sciences |
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3 | # machines climate0-climate3 (host identifier "lcyon") |
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4 | # and for IBM-Regatta-Power6 at KISTI (host identifier "ibmkisti") |
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5 | # DON'T FORGET to replace <...> by your respective valid username |
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6 | #column 1 column 2 column 3 |
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7 | #name of variable value of variable (~ must not be used) scope |
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8 | #---------------------------------------------------------------------------- |
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9 | %mainprog palm.f90 |
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10 | %base_directory $HOME/palm/current_version |
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11 | %base_data ~/palm/current_version/JOBS |
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12 | %source_path $base_directory/trunk/SOURCE |
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13 | %add_source_path $base_directory/USER_CODE/$fname |
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14 | %depository_path $base_directory/MAKE_DEPOSITORY |
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15 | # |
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16 | %host_identifier climate0 lcyon |
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17 | %host_identifier gaia* ibmkisti |
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18 | # |
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19 | %remote_username <replace by username on climate0> lcyon parallel |
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20 | %tmp_user_catalog $base_directory/work lcyon parallel |
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21 | %tmp_data_catalog $base_directory/work lcyon parallel |
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22 | %compiler_name mpif90 lcyon parallel |
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23 | %compiler_name_ser ifort lcyon parallel |
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24 | %cpp_options -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf lcyon parallel |
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25 | %netcdf_inc -I:/usr/local/netcdf/363_intel11/include lcyon parallel |
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26 | %netcdf_lib -L/usr/local/netcdf/363_intel11/lib:-lnetcdf lcyon parallel |
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27 | %mopts -j:4 lcyon parallel |
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28 | %fopts -fpe0:-axW:-O3:-cpp:-r8:-fp-model:precise:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian:-I:/usr/local/mpich2/intel11/include lcyon parallel |
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29 | %lopts -fpe0:-axW:-O3:-cpp:-r8:-fp-model:precise:-ftz:-fno-alias:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib:-L:/usr/local/mpich2/intel11/lib lcyon parallel |
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30 | %memory 2000 lcyon parallel |
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31 | # |
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32 | %compiler_name mpxlf95_r ibmkisti parallel |
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33 | %compiler_name_ser xlf95 ibmkisti parallel |
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34 | %cpp_options -qsuffix=cpp=f90:-WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,-D__netcdf=__netcdf,-D__netcdf_64bit=__netcdf_64bit ibmkisti parallel |
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35 | %netcdf_inc -I:/applic/local/64BIT/NETCDF/V363/include ibmkisti parallel |
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36 | %netcdf_lib -L/applic/local/64BIT/NETCDF/V363/lib:-lnetcdf ibmkisti parallel |
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37 | %fopts -O3:-g:-qfloat=nomaf:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr6:-qarch=pwr6:-qnosave:-qnoescape ibmkisti parallel |
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38 | %lopts -O3:-g:-qfloat=nomaf:-qrealsize=8:-Q:-q64:-qmaxmem=-1:-qtune=pwr6:-qarch=pwr6:-qnosave:-qnoescape:-lesslsmp ibmkisti parallel |
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39 | %memory 2000 ibmkisti parallel |
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40 | %cpumax 1000 ibmkisti parallel |
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41 | %numprocs 4 ibmkisti parallel |
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42 | %remote_username <replace by username on KISTI-IBM> ibmkisti parallel |
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43 | %tmp_data_catalog /gpfs1/<replace by username on KISTI-IBM>/palm_restart_data ibmkisti parallel |
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44 | %tmp_user_catalog /gpfs1/<replace by username on KISTI-IBM> ibmkisti parallel |
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45 | # |
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46 | %write_binary true restart |
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47 | # |
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48 | #---------------------------------------------------------------------------- |
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49 | # INPUT-commands, executed before running PALM - lines must start with "IC:" |
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50 | #---------------------------------------------------------------------------- |
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51 | #IC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && assign -F cachea:512:1:1 f:BININ |
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52 | # |
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53 | #---------------------------------------------------------------------------- |
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54 | # ERROR-commands - executed when program terminates abnormally |
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55 | #---------------------------------------------------------------------------- |
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56 | EC:[[ \$locat = compile && ( \$( echo \$localhost | cut -c1-3 ) = t3e ) ]] && cat cflist.out |
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57 | EC:[[ \$locat = execution ]] && cat RUN_CONTROL |
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58 | EC:[[ \$locat = execution ]] && cat PARTICLE_INFOS/* |
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59 | EC:[[ \$( echo \$localhost | cut -c1-3 ) = t3e ]] && ls -al |
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60 | EC:[[ \$( echo \$localhost | cut -c1-3 ) = ibm ]] && ls -al |
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61 | # |
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62 | #---------------------------------------------------------------------------- |
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63 | # OUTPUT-commands - executed when program terminates normally |
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64 | #---------------------------------------------------------------------------- |
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65 | # |
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66 | # Combine 1D- and 3D-profile output (these files are not usable for plotting) |
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67 | OC:[[ -f LIST_PROFIL_1D ]] && cat LIST_PROFIL_1D >> LIST_PROFILE |
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68 | OC:[[ -f LIST_PROFIL ]] && cat LIST_PROFIL >> LIST_PROFILE |
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69 | # |
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70 | # Combine all particle information files |
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71 | OC:[[ -f PARTICLE_INFOS/_0000 ]] && cat PARTICLE_INFOS/* >> PARTICLE_INFO |
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72 | # |
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73 | # tar all 3D-plot-data files in case that compressed output is switched on |
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74 | OC:[[ -f PLOT3D_COMPRESSED ]] && tar cf PLOT3D_DATA PLOT3D_DATA_* |
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75 | # |
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76 | #---------------------------------------------------------------------------- |
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77 | # List of input-files |
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78 | #---------------------------------------------------------------------------- |
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79 | PARIN in:job d3# $base_data/$fname/INPUT _p3d |
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80 | PARIN in:job pcr $base_data/$fname/INPUT _pcr |
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81 | PARIN in:job d3f $base_data/$fname/INPUT _p3df |
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82 | TOPOGRAPHY_DATA in:locopt d3#:d3f $base_data/$fname/INPUT _topo |
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83 | BININ in:loc:flpe d3f:rec $base_data/$fname/RESTART _d3d |
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84 | PARTICLE_RESTART_DATA_IN in:loc:flpe prtf $base_data/$fname/RESTART _rprt |
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85 | DATA_1D_PR_NETCDF in:locopt prf $base_data/$fname/OUTPUT _pr nc |
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86 | DATA_1D_SP_NETCDF in:locopt spf $base_data/$fname/OUTPUT _sp nc |
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87 | DATA_1D_TS_NETCDF in:locopt tsf $base_data/$fname/OUTPUT _ts nc |
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88 | DATA_1D_PTS_NETCDF in:locopt ptsf $base_data/$fname/OUTPUT _pts nc |
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89 | DATA_2D_XY_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy nc |
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90 | DATA_2D_XY_AV_NETCDF in:locopt xyf $base_data/$fname/OUTPUT _xy_av nc |
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91 | DATA_2D_XZ_NETCDF in:locopt xzf $base_data/$fname/OUTPUT _xz nc |
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92 | DATA_2D_YZ_NETCDF in:locopt yzf $base_data/$fname/OUTPUT _yz nc |
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93 | #DATA_3D_NETCDF in:locopt 3df $base_data/$fname/OUTPUT _3d nc |
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94 | DATA_PRT_NETCDF in:locopt:pe prtf $base_data/$fname/OUTPUT _prt |
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95 | # |
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96 | #---------------------------------------------------------------------------- |
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97 | # List of output-files |
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98 | #---------------------------------------------------------------------------- |
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99 | BINOUT out:loc:flpe restart $base_data/$fname/RESTART _d3d |
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100 | PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART _rprt |
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101 | # |
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102 | RUN_CONTROL out:loc:tr d3#:pcr $base_data/$fname/MONITORING _rc |
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103 | RUN_CONTROL out:loc:tra d3f $base_data/$fname/MONITORING _rc |
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104 | HEADER out:loc:tr d3#:pcr $base_data/$fname/MONITORING _header |
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105 | HEADER out:loc:tra d3f $base_data/$fname/MONITORING _header |
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106 | CPU_MEASURES out:loc:tr d3#:pcr $base_data/$fname/MONITORING _cpu |
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107 | CPU_MEASURES out:loc:tra d3f $base_data/$fname/MONITORING _cpu |
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108 | DVRP_LOG out:loc:tr dv# $base_data/$fname/MONITORING _dvrp_log |
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109 | DVRP_LOG out:loc:tra dvf $base_data/$fname/MONITORING _dvrp_log |
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110 | PARTICLE_INFO out:loc:tr pt# $base_data/$fname/MONITORING _prt_info |
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111 | PARTICLE_INFO out:loc:tra ptf $base_data/$fname/MONITORING _prt_info |
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112 | LIST_PROFIL out:loc:tr d3# $base_data/$fname/MONITORING _list_pr |
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113 | # |
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114 | DATA_1D_PR_NETCDF out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr nc |
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115 | #DATA_1D_PR_NETCDF out:loc pr#:prf $base_data/$fname/OUTPUT _pr nc |
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116 | DATA_1D_SP_NETCDF out:loc:tr sp#:spf $base_data/$fname/OUTPUT _sp nc |
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117 | #DATA_1D_SP_NETCDF out:loc sp#:spf $base_data/$fname/OUTPUT _sp nc |
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118 | DATA_1D_TS_NETCDF out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts nc |
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119 | #DATA_1D_TS_NETCDF out:loc ts#:tsf $base_data/$fname/OUTPUT _ts nc |
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120 | DATA_1D_PTS_NETCDF out:loc pts#:ptsf $base_data/$fname/OUTPUT _pts nc |
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121 | DATA_1D_PTS_NETCDF out:loc:tr pts#:ptsf $base_data/$fname/OUTPUT _pts nc |
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122 | #DATA_2D_XY_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy nc |
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123 | DATA_2D_XY_NETCDF out:loc xy#:xyf $base_data/$fname/OUTPUT _xy nc |
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124 | DATA_2D_XY_AV_NETCDF out:loc:tr xy#:xyf $base_data/$fname/OUTPUT _xy_av nc |
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125 | #DATA_2D_XZ_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz nc |
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126 | DATA_2D_XZ_NETCDF out:loc xz#:xzf $base_data/$fname/OUTPUT _xz nc |
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127 | DATA_2D_XZ_AV_NETCDF out:loc:tr xz#:xzf $base_data/$fname/OUTPUT _xz_av nc |
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128 | #DATA_2D_YZ_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz nc |
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129 | DATA_2D_YZ_NETCDF out:loc yz#:yzf $base_data/$fname/OUTPUT _yz nc |
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130 | DATA_2D_YZ_AV_NETCDF out:loc:tr yz#:yzf $base_data/$fname/OUTPUT _yz_av nc |
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131 | DATA_3D_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d nc |
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132 | DATA_3D_AV_NETCDF out:loc:tr 3d#:3df $base_data/$fname/OUTPUT _3d_av nc |
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133 | #DATA_3D_NETCDF out:loc 3d#:3df $base_data/$fname/OUTPUT _3d nc |
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134 | DATA_PRT_NETCDF out:loc:pe prt#:prtf $base_data/$fname/OUTPUT _prt |
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135 | DATA_PRT_NETCDF out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT _prt |
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136 | DATA_DVR out:loc:trpe dvr $base_data/$fname/OUTPUT _dvr |
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137 | PLOTTS_PAR out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_par |
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138 | PLOTTS_DATA out:loc:tr ts# $base_data/$fname/OUTPUT _ts_in |
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139 | PLOTTS_DATA out:loc:tra tsf $base_data/$fname/OUTPUT _ts_in |
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140 | PLOT1D_PAR out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_par |
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141 | PLOT1D_DATA out:loc:tr pr# $base_data/$fname/OUTPUT _pr_in |
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142 | PLOT1D_DATA out:loc:tr prf $base_data/$fname/OUTPUT _pr_in |
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143 | PLOTSP_X_PAR out:loc:tr spx $base_data/$fname/OUTPUT _spx_par |
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144 | PLOTSP_X_DATA out:loc:tr spx $base_data/$fname/OUTPUT _spx_in |
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145 | PLOTSP_Y_PAR out:loc:tr spy $base_data/$fname/OUTPUT _spy_par |
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146 | PLOTSP_Y_DATA out:loc:tr spy $base_data/$fname/OUTPUT _spy_in |
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147 | #PLOT2D_XY_GLOBAL out:loc:tr xy $base_data/$fname/OUTPUT _xy_par |
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148 | #PLOT2D_XY out:loc:tr xy $base_data/$fname/OUTPUT _xy_in |
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149 | #PLOT2D_XZ_GLOBAL out:loc:tr xz $base_data/$fname/OUTPUT _xz_par |
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150 | #PLOT2D_XZ out:loc:tr xz $base_data/$fname/OUTPUT _xz_in |
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151 | #PLOT2D_YZ_GLOBAL out:loc:tr yz $base_data/$fname/OUTPUT _yz_par |
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152 | #PLOT2D_YZ out:loc:tr yz $base_data/$fname/OUTPUT _yz_in |
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153 | PLOT3D_FLD out:loc:tr avs $base_data/$fname/OUTPUT _fld fld |
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154 | PLOT3D_COOR out:loc:tr avs $base_data/$fname/OUTPUT _avscor |
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155 | PLOT3D_DATA out:loc:tr avs $base_data/$fname/OUTPUT _avs |
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156 | PARTICLE_DATA out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT _prt_dat |
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157 | # |
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158 | # Output-example for using more than one statistical region |
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159 | #PLOTTS_PAR_0 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_0_par |
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160 | #PLOTTS_DATA_0 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_0_in |
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161 | #PLOTTS_DATA_0 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_0_in |
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162 | #PLOTTS_PAR_1 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_1_par |
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163 | #PLOTTS_DATA_1 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_1_in |
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164 | #PLOTTS_DATA_1 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_1_in |
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165 | #PLOTTS_PAR_2 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_2_par |
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166 | #PLOTTS_DATA_2 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_2_in |
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167 | #PLOTTS_DATA_2 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_2_in |
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168 | PLOT1D_PAR_0 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_0_par |
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169 | PLOT1D_DATA_0 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_0_in |
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170 | PLOT1D_PAR_1 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_1_par |
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171 | PLOT1D_DATA_1 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_1_in |
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172 | PLOT1D_PAR_2 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_2_par |
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173 | PLOT1D_DATA_2 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_2_in |
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174 | PLOT1D_PAR_3 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_3_par |
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175 | PLOT1D_DATA_3 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_3_in |
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176 | PLOT1D_PAR_4 out:loc:tr pr#:prf $base_data/$fname/OUTPUT _pr_4_par |
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177 | PLOT1D_DATA_4 out:loc:tr pr# $base_data/$fname/OUTPUT _pr_4_in |
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178 | PLOTTS_PAR_0 out:loc:tr ts#:tsf $base_data/$fname/OUTPUT _ts_par |
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179 | PLOTTS_DATA_0 out:loc:tr ts# $base_data/$fname/OUTPUT _ts_in |
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180 | PLOTTS_DATA_0 out:loc:tra tsf $base_data/$fname/OUTPUT _ts_in |
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181 | # |
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182 | #---------------------------------------------------------------------------- |
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183 | # List of input-files for coupled ocean model |
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184 | #---------------------------------------------------------------------------- |
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185 | PARIN_O in:job d3o# $base_data/$fname/INPUT _o_p3d |
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186 | PARIN_O in:job d3of $base_data/$fname/INPUT _o_p3df |
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187 | # |
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188 | #---------------------------------------------------------------------------- |
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189 | # List of output-files for coupled ocean model |
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190 | #---------------------------------------------------------------------------- |
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191 | RUN_CONTROL_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_rc |
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192 | RUN_CONTROL_O out:loc:tra d3of $base_data/$fname/MONITORING _o_rc |
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193 | HEADER_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_header |
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194 | HEADER_O out:loc:tra d3of $base_data/$fname/MONITORING _o_header |
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195 | CPU_MEASURES_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_cpu |
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196 | CPU_MEASURES_O out:loc:tra d3of $base_data/$fname/MONITORING _o_cpu |
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197 | LIST_PROFIL_O out:loc:tr d3o# $base_data/$fname/MONITORING _o_list_pr |
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198 | # |
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199 | DATA_1D_PR_NETCDF_O out:loc:tr pro#:prof $base_data/$fname/OUTPUT _o_pr nc |
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200 | DATA_1D_SP_NETCDF_O out:loc:tr spo#:spof $base_data/$fname/OUTPUT _o_sp nc |
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201 | DATA_1D_TS_NETCDF_O out:loc:tr tso#:tsof $base_data/$fname/OUTPUT _o_ts nc |
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202 | DATA_1D_PTS_NETCDF_O out:loc:tr ptso#:ptsof $base_data/$fname/OUTPUT _o_pts nc |
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203 | DATA_2D_XY_NETCDF_O out:loc:tr xyo#:xyof $base_data/$fname/OUTPUT _o_xy nc |
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204 | DATA_2D_XY_AV_NETCDF_O out:loc:tr xyo#:xyof $base_data/$fname/OUTPUT _o_xy_av nc |
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205 | DATA_2D_XZ_NETCDF_O out:loc:tr xzo#:xzof $base_data/$fname/OUTPUT _o_xz nc |
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206 | DATA_2D_XZ_AV_NETCDF_O out:loc:tr xzo#:xzof $base_data/$fname/OUTPUT _o_xz_av nc |
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207 | DATA_2D_YZ_NETCDF_O out:loc:tr yzo#:yzof $base_data/$fname/OUTPUT _o_yz nc |
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208 | DATA_2D_YZ_AV_NETCDF_O out:loc:tr yzo#:yzof $base_data/$fname/OUTPUT _o_yz_av nc |
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209 | # A BLANK LINE MUST FOLLOW |
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