1 | <!DOCTYPE html PUBLIC "-//w3c//dtd html 4.0 transitional//en"> |
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2 | <html><head> |
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3 | <meta content="text/html; charset=ISO-8859-1" http-equiv="Content-Type"> <meta content="Mozilla/4.73 [en] (X11; U; HP-UX B.10.20 9000/782) [Netscape]" name="GENERATOR"> <meta content="Siegfried Raasch" name="Author"> <meta content="parallel LES model" name="Keywords"><title>PALM technical/numerical documentation</title></head> |
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4 | <body><font size="+4">PALM |
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5 | </font>a |
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6 | <b>pa</b>rallelized |
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7 | <b>L</b>ES <b>m</b>odel |
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8 | <br><hr width="100%"> |
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9 | <br><font size="+2">technical/numerical documentation</font> |
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10 | <br> |
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11 | <br> |
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12 | <br><table nosave="" cellpadding="0" cellspacing="0"> <caption> <br> </caption><tbody> |
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13 | </tbody><tbody> </tbody> <tbody> <tr nosave=""> <td nosave=""><b>Current |
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14 | model version:</b></td> <td><span style="font-weight: bold;">3.3</span></td> </tr> |
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15 | <tr nosave=""> <td nosave=""><b>Last |
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16 | change of this document</b>: </td> <td nosave=""><b>$Id: technical_documentation.html 98 2007-06-21 09:36:33Z heinze $</b></td> </tr> |
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17 | </tbody> |
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18 | </table><hr width="100%"> |
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19 | <p><font size="+2">Table of contents</font> |
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20 | <br> |
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21 | <br> |
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22 | </p><ul> <a href="#Kapitel1.0">1.0</a> |
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23 | History of changes <p><a href="#Kapitel2.0">2.0</a> |
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24 | How to change the model source |
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25 | code </p> <p><a href="#Kapitel3.0">3.0</a> |
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26 | Description of selected parts |
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27 | of |
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28 | the model source code <br> |
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29 | </p> |
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30 | </ul><b>Please note: Parts of this document are still in |
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31 | German. We |
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32 | apologize |
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33 | for any inconvenience.</b> |
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34 | <br> |
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35 | <h2><a name="Kapitel1.0"></a>1.0 |
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36 | History of changes</h2> |
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37 | The following table documents all changes to the model since July, 7th |
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38 | 1998. Entries in the fourth column specify the type of the change: |
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39 | change |
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40 | of existing code (C), new code (N) or bugfix (B). More detailed |
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41 | information |
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42 | about the changes may be found in the header comment lines of the |
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43 | respective |
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44 | routines. |
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45 | <br> |
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46 | <br><table nosave="" style="width: 100%;" border="1"> <caption> <br> </caption><tbody> |
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47 | </tbody><tbody> </tbody> <tbody> <tr> <td><b>date</b></td> |
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48 | <td><b>author</b></td> <td><b>model</b> |
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49 | <br> <b>version</b></td> <td><b>type</b></td> |
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50 | <td><b>description</b></td> <td><b>affected |
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51 | routines</b></td> </tr> <tr nosave="" valign="top"> <td>06/07/98</td> <td>SR</td> |
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52 | <td>1.0</td> <td>C</td> <td nosave="">Änderung |
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53 | von Default-Werten |
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54 | (initializing_actions, end_time, |
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55 | fcl_factor, use_prior_plot1d_parameters), zusätzliche |
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56 | Überprüfung |
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57 | von Parametern auf Zulässigkeit (prandtl_layer, psolver, nx, |
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58 | ny, |
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59 | nz, |
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60 | fcl_factor), Höhe der Schnittebenen der Horizontalschnitte |
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61 | wird |
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62 | auf |
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63 | Plots exakt ausgegeben (uv- bzw. w-Gitter).</td> <td>modules, |
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64 | check_parameters, plot_2d</td> </tr> <tr nosave="" valign="top"> <td>"</td> <td>SR</td> |
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65 | <td>1.0</td> <td>N</td> <td>Neues Modul |
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66 | test_variables wird in (fast) allen |
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67 | Programmteilen benutzt |
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68 | (USE). <b>Wichtig</b>: dieses Modul steht in der Datei <tt>module_test.f90. |
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69 | D</tt>iese Datei muß in der mrun- und add_library - |
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70 | Konfigurationsdatei |
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71 | bei der Variablen <tt>module_files</tt> |
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72 | aufgeführt werden.</td> <td nosave="">(fast) |
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73 | alle <br> |
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74 | Neu: module_test</td> </tr> <tr nosave="" valign="top"> <td>16/07/98</td> <td>SR</td> |
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75 | <td>1.0</td> <td>N</td> <td nosave="">Anpassung |
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76 | an die T3E-Rechner in Juelich (cpp - |
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77 | Direktiven)</td> <td>advec_s_bc, check_open, |
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78 | check_parameters, cpu_zeitmessung, |
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79 | init_pegrid, |
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80 | local_getenv, local_system, local_tremain, local_tremain_ini, poisfft</td> |
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81 | </tr> <tr nosave="" valign="top"> <td>24/07/98</td> |
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82 | <td>MS</td> <td>1.0</td> <td>C</td> |
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83 | <td nosave="">Anpassung des Druckloesealgorithmusses an |
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84 | Vorgehensweise von |
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85 | Schmidt, Schumann und Volkert (DFVLR-Mitteilung 84-15, S. |
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86 | 20-26) </td> <td>poisfft</td> </tr> <tr nosave="" valign="top"> <td>27/07/98</td> |
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87 | <td>MS</td> <td>1.0</td> <td>C</td> |
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88 | <td nosave="">Berechnung von l in maketri geschieht nun |
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89 | ausserhalb der k-Schleife, |
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90 | da unabhaengig von k, dadurch Rechenzeitersparnis </td> <td>poisfft</td> |
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91 | </tr> <tr nosave="" valign="top"> <td>05/08/98</td> |
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92 | <td>SR</td> <td>1.0</td> <td>C</td> |
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93 | <td>Entfernung der Sonderbehandlung der Advektionsterme |
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94 | (Piascek-Williams) |
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95 | bei k=1. Terme werden nun überall gleich berechnet. Evtl. |
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96 | leichte |
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97 | Erhöhung der Varianzen in Oberflächennähe.</td> |
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98 | <td nosave="">advec_u_pw, advec_v_pw, advec_w_pw</td> |
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99 | </tr> <tr nosave="" valign="top"> <td nosave="">"</td> <td>SR</td> <td>1.0</td> |
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100 | <td>C</td> <td>Mischungsweganpassung (s. |
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101 | adjust_mixing_length) erfolgt nur |
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102 | noch bei |
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103 | k=1. Unrealistische sekundäre Maxima in den Km-Profilen |
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104 | oberhalb |
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105 | der |
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106 | Prandtl-Schicht werden damit vermieden. Leichte Änderungen in |
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107 | den |
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108 | oberflächennahen Turbulenzgrößen sind die |
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109 | Folge.</td> <td>diffusivities</td> </tr> <tr nosave="" valign="top"> <td>"</td> <td>SR</td> |
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110 | <td>1.0</td> <td>B</td> <td>Falsche |
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111 | Berechnung der benötigten CPU-Zeit pro Sekunde |
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112 | simulierter |
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113 | Zeit bei Fortsetzungsläufen korrigiert. <p>Berechnung |
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114 | von cross_uxmin(1) und cross_uxmax(1) aus den |
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115 | Werten von |
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116 | ug und vg entfernt. Lieferte falsche Wertebereiche für Plots |
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117 | von |
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118 | Vertikalprofilen, |
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119 | wenn im ersten Koordinatenkreuz nicht die Windgeschwindigkeiten |
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120 | gezeichnet |
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121 | wurden.</p> </td> <td nosave="">header, |
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122 | check_parameters</td> </tr> <tr nosave="" valign="top"> <td nosave="">"</td> <td>SR</td> |
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123 | <td>1.0</td> <td>N</td> <td>Das |
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124 | erlaubte Maximum und Minimum der Rif-Zahl ist nun mittels |
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125 | der Initialparameter |
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126 | rif_max und rif_min einstellbar (Werte waren bisher fest auf -2.0, +1.0 |
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127 | eingestellt).</td> <td>check_parameters, header, |
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128 | init_1d_model, modules, parin, |
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129 | prandtl_fluxes, |
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130 | read_var_list, write_var_list</td> </tr> <tr nosave="" valign="top"> <td nosave="">23/09/98</td> |
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131 | <td>SR</td> <td>1.0</td> <td>B</td> |
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132 | <td>Initialisierung von Feldern im Fall von initializing_action = |
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133 | "<i>set_constant_profiles</i>" |
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134 | und "<i>set_1d-model_profiles</i>" korrigiert. <p>2D-Plotausgabe |
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135 | von u* und theta* korrigiert. Hier wurden |
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136 | bisher falsche |
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137 | Felder herausgeschrieben. </p> <p>Bei |
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138 | SOR-Aufrufen war bisher dp nicht initialisiert. |
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139 | Entsprechend geändert.</p> </td> <td>init_3d_model, |
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140 | plot_2d, pres</td> </tr> <tr nosave="" valign="top"> <td>"</td> <td>SR</td> |
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141 | <td>1.0</td> <td>C</td> <td nosave="">Ausgabeformate |
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142 | für Statistik-Ausgaben auf |
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143 | Datei RUN_CONTROL |
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144 | um einige Kommastellen erweitert. <p>Lieferung von |
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145 | ausführlicheren Informationen bei |
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146 | Programmabbruch |
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147 | durch Unterschreitung des minimal erlaubten Zeitschritts.</p> </td> |
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148 | <td>run_control, timestep</td> </tr> <tr nosave="" valign="top"> <td nosave="">"</td> |
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149 | <td>SR</td> <td>1.0</td> <td>N</td> |
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150 | <td>Rechnungen mit geneigter Ebene zur Simulation von |
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151 | Kaltluftabflüssen |
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152 | sind erlaubt. Gestartet und gesteuert werden sie mit dem |
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153 | Intialisierungsparameter <tt>alpha_surface</tt>. |
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154 | Realisiert wird die geneigte Ebene durch entsprechende |
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155 | Schrägstellung |
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156 | des Schwerkraftvektors. Dadurch erhält auch die u-Komponente |
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157 | der |
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158 | Windgeschwindigkeit |
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159 | einen Anteil der Auftriebskraft. <p>Diese |
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160 | Implementierung ist noch nicht abgeschlossen. Die |
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161 | Simulation von |
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162 | Kaltluftabflüssen erfordert bisher noch Eingriffe "von Hand".</p> |
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163 | </td> <td>buoyancy, check_parameters, header, leap_frog, |
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164 | modules, |
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165 | parin, prandtl_fluxes, |
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166 | read_var_list, write_var_list</td> </tr> <tr nosave="" valign="top"> <td>15/12/98</td> <td>SR</td> |
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167 | <td>1.0</td> <td>N</td> <td>Vereinbarung |
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168 | einer Cache-Layer zur schnelleren binären |
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169 | I/O auf |
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170 | T3E-Rechnern. <p>Ermittelung wahrer I/O-Zeiten |
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171 | für binäre |
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172 | Ein-/Ausgabe auf |
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173 | T3E-Rechnern mit TIMEF.</p> </td> <td nosave="">check_open, |
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174 | <br>cpu_zeitmessung, init_3d_model, write_3d_model</td> </tr> |
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175 | <tr nosave="" valign="top"> <td nosave="">"</td> |
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176 | <td>SR</td> <td>1.0</td> <td>B</td> |
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177 | <td>Bekanntgabe von run_description_header an alle |
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178 | PE's. <p>Diese Programmänderung erfordert auf |
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179 | T3E-Rechnern |
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180 | zwingend den |
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181 | Einsatz der MPI-Version mpt.1.2.0.1. In dieser neuen Version tritt auch |
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182 | der alte Fehler in MPI_ALLREDUCE nicht mehr auf, so daß ab |
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183 | jetzt |
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184 | mpt.1.1.0.1 nicht mehr verwendet werden muß.</p> </td> |
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185 | <td>parles</td> </tr> <tr nosave="" valign="top"> <td nosave="">05/02/99</td> |
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186 | <td>SR</td> <td>1.1</td> <td>C/N</td> |
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187 | <td>Implementierung des Upstream-Spline- Verfahrens zur Advektion |
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188 | von Impuls |
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189 | und skalaren Größen (neue UP's, s. rechts). |
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190 | Berechnung von |
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191 | Variablen |
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192 | für spezielle Advektionsverfahren in eigenständiges |
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193 | UP |
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194 | ausgelagert |
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195 | (<tt>init_advec</tt> + eigenes Modul <tt>advection</tt>). |
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196 | Reines |
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197 | Euler-/Upstream-Verfahren |
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198 | kann gerechnet werden. <p>Schnelle binäre I/O |
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199 | (s. 15/12/98) wieder abgeschaltet, da |
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200 | Dateien |
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201 | nicht wieder einlesbar sind. Druckstörung (p) wird zu Beginn |
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202 | auf 0 |
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203 | gesetzt, damit sie keine Tendenzen im ersten Zeitschritt hervorruft.</p> |
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204 | </td> <td>advec_s_bc, check_open, check_parameters, |
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205 | flow_statistics, |
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206 | header, |
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207 | init_3d_model, init_grid, leap_frog, modules, parin, plot_2d, plot_ts, |
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208 | read_var_list, timestep, write_3d_binary, write_var_list <p><b>Neu:</b> |
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209 | <br> |
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210 | advec_s_ups, advec_u_ups, advec_v_ups, advec_w_ups, init_advec, |
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211 | long_filter, |
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212 | spline_x, spline_y, spline_z</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">24/02/99</td> |
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213 | <td>SR</td> <td>1.1a</td> <td>C/N</td> |
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214 | <td>Kleinere Ergänzungen / Änderungen |
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215 | für Upstream |
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216 | - Spline, <br> |
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217 | Diverse Verbesserungen bei Berechnung der Diffusionskoeffizienten |
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218 | (exaktere |
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219 | Formulierung von Scherungen, Dissipation gemaess Original - Deardorff - |
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220 | Ansatz, Mischungswegreduktion nur, wenn Schichtung sowohl oberhalb als |
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221 | auch unterhalb des entsprechenden Gitterpunktes stabil ist), |
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222 | Wertebegrenzung |
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223 | bei Spline - Berechnung zur Verhinderung von "Überschwingern"</td> |
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224 | <td>check_parameters, diffusion_e, diffusion_pt, diffusivities, |
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225 | header, |
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226 | init_advec, long_filter, modules, production_e, spline_x, spline_y, |
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227 | spline_z</td> </tr> <tr nosave="" valign="top"> |
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228 | <td>"</td> <td nosave="">SR</td> <td>1.1a</td> |
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229 | <td>N/B</td> <td>Erweiterung des des Bott - Chlond - |
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230 | Schemas auf Advektion der |
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231 | TKE, |
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232 | Korrektur der Dichteberechnung (war falsch bei Galilei-Transformation)</td> |
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233 | <td>advec_s_bc, leap_frog</td> </tr> <tr nosave="" valign="top"> <td nosave="">01/03/99</td> |
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234 | <td>MS</td> <td>1.1b</td> <td>N</td> |
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235 | <td>Kleinere Ergänzungen für Upstream - |
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236 | Spline: <ul> <li>Gradientenkontrolle |
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237 | für den nicht-parallelen Teil</li> <li>statistische |
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238 | Auswertung über den prozentualen Anteil |
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239 | des |
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240 | Upstream-Verfahrens |
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241 | an der Gesamtadvektion fuer nicht-parallelen Teil</li> </ul> |
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242 | </td> <td>modules, spline_x, spline_y, spline_z</td> |
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243 | </tr> <tr nosave="" valign="top"> <td>"</td> |
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244 | <td>SR</td> <td>1.1b</td> <td>N</td> |
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245 | <td>Datenkompression für 3D-Plotausgaben</td> <td nosave="">check_open, check_parameters, close_files, header, |
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246 | modules, |
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247 | parin, plot_3d <p><b>Neu:</b> <br> |
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248 | write_compressed</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">03/03/99</td> |
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249 | <td>SR</td> <td>1.1c</td> <td>B/C</td> |
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250 | <td>Schnelle binäre I/O auf T3E-Rechnern funktioniert |
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251 | jetzt. |
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252 | Beim |
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253 | binären Einlesen dürfen Records nicht mit dem Trick "<tt>READ |
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254 | (..) idum</tt>" überlesen werden. Zeitmessungen auf T3E |
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255 | erfolgen |
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256 | jetzt |
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257 | grundsätzlich mit <tt>TIMEF.</tt></td> <td>check_open, |
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258 | cpu_zeitmessung, init_3d_model, modules, |
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259 | write_3d_binary</td> </tr> <tr nosave="" valign="top"> <td nosave="">25/03/99</td> |
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260 | <td>SR</td> <td>1.1d</td> <td>N</td> |
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261 | <td>Einbau einer Rayleigh-Dämpfungsschicht sowie |
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262 | flexiblere |
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263 | Wahl der |
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264 | numerischen Begrenzer für das Upstream - Spline - Verfahren.</td> |
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265 | <td>check_parameters, header, init_3d_model, leap_frog, modules, |
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266 | parin, |
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267 | read_var_list, spline_x, spline_y, spline_z, write_var_list</td> </tr> |
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268 | <tr nosave="" valign="top"> <td nosave="">"</td> |
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269 | <td>SR</td> <td>1.1d</td> <td>B</td> |
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270 | <td>Korrektur des Zeitschrittkriteriums bei z=zp im 1D-Modell</td> |
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271 | <td>init_1d_model</td> </tr> <tr nosave="" valign="top"> <td>25/11/99</td> <td>SR</td> |
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272 | <td>1.1e</td> <td>N</td> <td nosave="">Partikelplots |
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273 | mit vtk-Graphiksoftware sind auf t3eh |
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274 | möglich. |
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275 | Ausgabe erfolgt im dvr-Format. Bisher noch nicht nutzbar, da noch |
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276 | Einstellmöglichkeiten |
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277 | für die Partikelquelle(n) fehlen. <b>Wichtig:</b> |
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278 | Die Benutzung |
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279 | der |
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280 | vtk-Software erfordert die zusätzliche mrun-Option <tt>-g</tt>. |
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281 | Das |
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282 | Hauptprogramm <tt>parles</tt> wird in diesem Fall zum |
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283 | Unterprogramm |
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284 | und |
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285 | von einem c++-Programm aus aufgerufen.</td> <td>header, |
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286 | init_3d_model, init_pegrid, leap_frog, modules, |
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287 | parin, parles, |
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288 | read_var_list, write_var_list <p><b>Neu:</b> |
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289 | <br> |
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290 | advec_particles, init_particles, plot_particles</p> </td> </tr> |
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291 | <tr nosave="" valign="top"> <td>"</td> |
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292 | <td>SR</td> <td>1.1e</td> <td nosave="">B/C</td> |
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293 | <td>TIMEF-Zeitmessungen von Subroutine- auf Function-Aufruf |
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294 | umgestellt. |
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295 | Laufindexkorrektur in <tt>spline_y</tt>. Fehler trat bei |
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296 | nx /= ny auf.</td> <td>cpu_zeitmessung, spline_y</td> |
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297 | </tr> <tr nosave="" valign="top"> <td nosave="">28/12/99</td> <td>SR</td> <td>1.1f</td> |
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298 | <td>N</td> <td>Plot von Isooberflächen mit |
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299 | vtk-Graphiksoftware sind auf |
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300 | t3eh |
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301 | möglich. Ausgabe erfolgt im dvr-Format. Bisher noch nicht |
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302 | allgemein |
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303 | nutzbar, da noch diverse manuelle Eingriffe nötig sind.</td> |
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304 | <td>header, leap_frog, modules, parin, plot_particles, |
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305 | read_var_list, write_var_list <p><b>Neu:</b> |
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306 | <br> |
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307 | plot_isosurface</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">10/01/00</td> |
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308 | <td>SR</td> <td>1.2</td> <td>C</td> |
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309 | <td>Randbedingungen für w (=0) werden explizit gesetzt, |
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310 | und |
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311 | zwar nicht |
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312 | nur bei <tt>k = nzb, nzt+1</tt> sondern auch |
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313 | bei <tt>k = |
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314 | nzt</tt>, |
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315 | wo bislang der vom vorigen Zeitschritt durch den Drucklöser |
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316 | ermittelte |
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317 | Wert stand. Auch jetzt wird der Wert bei k = nzt anschließend |
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318 | durch |
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319 | den Drucklöser modifiziert. Soweit bis jetzt abzusehen, hat |
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320 | diese |
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321 | Änderung nur minimale Auswirkungen auf den Prognoseverlauf. |
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322 | Evtl. |
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323 | gibt es stärkere Auswirkungen bei exzessivem Auftreten von |
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324 | Schwerewellen |
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325 | am oberen Rand (die dort aber eigentlich sowieso nicht |
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326 | hingehören). <br> |
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327 | Variablenübergabe an <tt>boundary_conds</tt> |
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328 | erfolgt <br> |
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329 | über Modul und nicht mehr per Parameterliste. <p>Bei |
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330 | Galilei-Transformation wird jetzt defaultmäßig |
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331 | der geostrophische |
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332 | Wind als Translationsgeschwindigkeit verwendet (neuer |
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333 | Initialisierungsparameter <tt>use_ug_for_galilei_tr</tt>). |
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334 | Dadurch wird das verstärkte Auftreten von Schwerewellen bei |
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335 | höheren |
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336 | geostrophischen Windgeschwindigkeiten unterdrückt. </p> |
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337 | <p>3D-Feldvariablen (u, v, w, pt, e, km, kh) sowie einige |
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338 | 2D-Variablen |
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339 | (usws, vsws, rif, shf) sind nun als Pointer deklariert, denen nach |
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340 | jedem |
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341 | Zeitschritt neue Targets zugeordnet werden (für die |
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342 | benötigten |
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343 | 3 Zeitebenen existieren die Targets ..._1 (z.B. u_1), ..._2, ..._3). |
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344 | Durch |
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345 | die jeweilige Neuzuordnung der Targets entfällt das |
---|
346 | Umspeichern |
---|
347 | der |
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348 | Zeitebenen komplett (Zeitersparung: ca. 5% der |
---|
349 | Gesamtrechenzeit). <br> |
---|
350 | Die Umordnung der Zeitebenen wurde ins neue UP <tt>swap_timelevel</tt> |
---|
351 | ausgelagert. <br> <b>Wichtig:</b> Die |
---|
352 | Übersetzungszeiten haben durch die |
---|
353 | Einführung |
---|
354 | der Pointer t.w. sehr deutlich zugenommen (<tt>leap_frog</tt> |
---|
355 | benötigt |
---|
356 | jetzt z.B. ca. 60 Sekunden). Außerdem benötigt der |
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357 | Compiler |
---|
358 | jetzt wesentlich mehr Speicher. Der "memory"-Parameter in den |
---|
359 | Konfigurationsdateien |
---|
360 | (.mrun.config, .al.config) muss nun mindestens den Wert 60 (MB) (t3eh, |
---|
361 | t3ej2) bzw. 45 (t3eb) und 96 (vpp) haben. <br> <b>Achtung:</b> |
---|
362 | bislang wurde diese Änderung nur für |
---|
363 | das |
---|
364 | reine Leapfrog-Verfahren getestet! </p> <p>Neue |
---|
365 | Laderoption "<tt>-D preset=nan</tt>" empfohlen (s. |
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366 | Beispiel-Konfigurationsdatei). |
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367 | Ebenso empfehlenswert für Debug-Läufe: Compileroption |
---|
368 | "<tt>-ei</tt>". |
---|
369 | Diese bewirkt einen Programmabbruch, falls mit nicht initialisierten |
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370 | Variablen |
---|
371 | gearbeitet wird (ist aber zeitaufwendig in der Ausführung!).</p> |
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372 | </td> <td>boundary_conds, check_parameters, header, |
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373 | init_3d_model, |
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374 | leap_frog, |
---|
375 | modules, parin, read_var_list, timestep, write_var_list <p><b>Neu:</b> |
---|
376 | <br> |
---|
377 | swap_timelevel</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">10/01/00</td> |
---|
378 | <td>SR</td> <td>1.2</td> <td>B</td> |
---|
379 | <td>Der Asselin-Filter wird vor Umordnung der Zeitebenen |
---|
380 | aufgerufen. Dies |
---|
381 | geschah bisher fälschlicherweise erst danach, sodass der |
---|
382 | Zeitfilter |
---|
383 | asymmetrisch arbeitete. <br> <b>Achtung:</b> |
---|
384 | diese Änderung hat Auswirkungen auf den |
---|
385 | Prognoseverlauf. |
---|
386 | Die Testergebnis-Datei wurde entsprechend geändert.</td> |
---|
387 | <td>leap_frog</td> </tr> <tr nosave=""> |
---|
388 | <td nosave="" valign="top">14/02/00</td> <td nosave="" valign="top">MS</td> <td nosave="" valign="top">1.2</td> <td nosave="" valign="top">B/C</td> <td><b>1D-Modell:</b> |
---|
389 | <br> |
---|
390 | Der Asselin-Filter im 1D-Modell wird nun auch vor der Umordnung der |
---|
391 | Zeitebenen aufgerufen (s.o.). <p><b>3D-Modell:</b> |
---|
392 | <br> |
---|
393 | TKE wurde bisher bei <tt>scalar_advec=bc-scheme</tt> einer |
---|
394 | zeitlichen |
---|
395 | Filterung unterzogen. Dies wird nun unterbunden. </p> <p>Die |
---|
396 | Divergenz der Impulsflüsse an der Prandtl - Schicht - |
---|
397 | Obergrenze |
---|
398 | wird nun über eine ganze Gitterweite gebildet. Die bisherige |
---|
399 | Methode |
---|
400 | lieferte im Vergleich mit Ergebnissen anderer LES-Modelle zu |
---|
401 | große |
---|
402 | Impulsflüsse. </p> <p>Bei der |
---|
403 | Berechnung der Diffusion der Temperatur werden die |
---|
404 | Diffusionskoeffizienten |
---|
405 | nun wieder durch Mittelung für die entsprechenden |
---|
406 | Gitterpunkte |
---|
407 | bereitgestllt. Das Maximumkriterium, das im Zuge der Implementierung |
---|
408 | des |
---|
409 | Upstream-Spline Advektionsverfahrens eingebaut wurde, bewirkte ein zu |
---|
410 | rasches |
---|
411 | Anwachsen der Grenzschicht mit der Zeit. </p> <p><b>Achtung:</b> |
---|
412 | diese Änderungen haben Auswirkungen auf |
---|
413 | den Prognoseverlauf. |
---|
414 | Die Testergebnis-Datei wurde entsprechend geändert.</p> </td> |
---|
415 | <td nosave="" valign="top">init_1d_model, |
---|
416 | asselin_filter, |
---|
417 | diffusion_u, diffusion_v, <br> |
---|
418 | diffusion_pt</td> </tr> <tr nosave="" valign="top"> <td nosave="">17/02/00</td> |
---|
419 | <td>MS</td> <td>2.0</td> <td>N</td> |
---|
420 | <td><b>Allgemeine Beschreibung der Änderungen:</b> |
---|
421 | <br> |
---|
422 | vollständige Implementierung des wolkenphysikalischen |
---|
423 | Moduls <p>Zur Implementierung der Wolkenphysik waren |
---|
424 | umfangreiche |
---|
425 | Änderungen |
---|
426 | in zahlreichen Programmteilen notwendig (Beschreibung <a href="#Cloud_physics">siehe |
---|
427 | unten</a> ). Im einzelnen wurden folgende Unprogramme |
---|
428 | geändert: <br> <b>modules</b>: |
---|
429 | <br>1) Bereitstellung neuer 3D-, 2D- und 1D-Felder für |
---|
430 | die Prognose |
---|
431 | des Gesamtwassergehaltes <br> |
---|
432 | 2) "cloud_parameters" als neues Modul mit wolkenphysikalischen |
---|
433 | Variablen <br> <b>parin: </b>Initialisierungsparameterliste |
---|
434 | wurde erweitert |
---|
435 | (s.u.) <br> <font color="#000000"><b>read_var_list, |
---|
436 | write_var_list, |
---|
437 | write_3d_binary: </b>In/Output |
---|
438 | der neuen Initialisierungsparamter und Felder für |
---|
439 | Fortsetzungsläufe </font> <br> <font color="#000000"><b>check_parameters:</b> |
---|
440 | Initialisierung |
---|
441 | des |
---|
442 | Feuchteprofils und Ausgabe von neuen Vertikalprofilen: </font> |
---|
443 | <br> <font color="#ff0000">vpt</font><font color="#000000">: virtuelle |
---|
444 | poteniellen |
---|
445 | Temperatur,</font> <br> <font color="#ff0000">lpt</font><font color="#000000">: |
---|
446 | potentielle |
---|
447 | Flüssigwassertemperatur,</font> <br> <font color="#ff0000">q</font><font color="#000000">: |
---|
448 | Gesamtwassergehalt,</font> <br> <font color="#ff0000">qv</font><font color="#000000">: |
---|
449 | spezifische |
---|
450 | Feuchte,</font> <br> <font color="#ff0000">ql</font><font color="#000000">: |
---|
451 | Flüssigwassergehalt,</font> <br> <font color="#ff0000">w"vpt", w*vpt*, wvpt</font><font color="#000000">: |
---|
452 | Auftriebsfluss (subskalig, aufgelöst, gesamt),</font> <br> |
---|
453 | <font color="#ff0000">w"q", w*q*, wq</font><font color="#000000">: |
---|
454 | Wasserfluss (subs., aufg., ges.),</font> <br> <font color="#ff0000">w"qv", w*qv*, wqv</font><font color="#000000">: |
---|
455 | Feuchtefluss (subs, aufg., ges.)</font> <br> <b>init_3d_model</b>: |
---|
456 | Initialisierung aller |
---|
457 | Feuchte/Wasserfelder <br> <b>init_1d_model</b>: |
---|
458 | Anpassung an Rechnungen mit Feuchte <br> <b>header</b>: |
---|
459 | Headerausgaben für Feuchtebehandlung und |
---|
460 | Wolkenphysik |
---|
461 | eingefügt, außerdem Formatnummern erweitert um Platz |
---|
462 | für |
---|
463 | weitere Ausgaben zu schaffen <br> <b>leap_frog:</b> |
---|
464 | <br> |
---|
465 | 1) alle prognostischen Gleichungen wurden in prognostic_equations |
---|
466 | ausgelagert <br> |
---|
467 | 2) Aufrufe der neuen Unterprogramme (UP) compute_vpt, |
---|
468 | calc_liquid_water_content <br> |
---|
469 | 3) veraenderter Aufruf von diffusivities <br> <b><tt>b</tt>oundary_conds, |
---|
470 | asselin_filter, swap_timelevel, |
---|
471 | flow_statistics: </b>Anpassung |
---|
472 | an Feuchtebehandlung <br> <b>plot2d, plot3d</b>: |
---|
473 | Ausgabemöglichkeiten von q und ql <br> <b>buoyancy</b>: |
---|
474 | Anpassung des Autriebstermes an |
---|
475 | Feuchtebehandlung |
---|
476 | durch neue Übergabeparameter: Temperatur + Nummer des |
---|
477 | entsprechenden |
---|
478 | mittleren Temperaturprofils <br> <b>diffusion_e</b>: |
---|
479 | Anpassung der Mischungswegberechnung an |
---|
480 | Feuchtebehandlung |
---|
481 | durch Variation der Übergabeparameter <br> <b>production_e</b>: |
---|
482 | TKE-Produktion durch Auftriebskräfte an |
---|
483 | Feuchtebehandlung |
---|
484 | angepasst <br> <b>diffusivities</b>: |
---|
485 | siehe diffusion_e <br> <b>prandtl-fluxes</b>: |
---|
486 | Prandtl-Schicht fuer den |
---|
487 | Gesamtwassergehalt |
---|
488 | eingefügt </p> <p>Zusätzlich |
---|
489 | wurden folgende Unterprogramme NEU |
---|
490 | eingeführt: <br> <b>inti_cloud_physics</b>: |
---|
491 | Initialisierung wolkenphysikalischer |
---|
492 | Parameter <br> <b>prognostic_equations</b>: |
---|
493 | Auslagerung der prognostischen |
---|
494 | Gleichungen |
---|
495 | aus leap_frog, zusätzliche porgnostische Gleichung |
---|
496 | für den |
---|
497 | Gesamtwassergehalt <br> <b>diffusion_s</b>: |
---|
498 | Berechnung der Diffusion skalarer |
---|
499 | Größen |
---|
500 | (Temperatur und Gesamtwassergehalt), ersetzt diffusion_pt <br> |
---|
501 | <b>calc_liquid_water_content</b>: Berechnung des |
---|
502 | Flüssigwassergehalts <br> <b>calc_radiation</b>: |
---|
503 | Parametrisierung langwelliger |
---|
504 | Strahlungsprozesse |
---|
505 | über des Schema der effektiven Emissivität <br> |
---|
506 | <b>calc_precipitation</b>:Parametrisierung von |
---|
507 | Niederschlagsprozessen |
---|
508 | mit Hilfe eines vereinfachten Kesslerschemas <br> <b>impact_of_latent_heat</b>: |
---|
509 | Berücksichtigung der durch |
---|
510 | Niederschlagsprozesse |
---|
511 | zurückbleibenden latenten Waerme innerhalb eines |
---|
512 | Gittervolumens <br> <b>compute_vpt</b>: |
---|
513 | Berechnung der virtuellen potentiellen |
---|
514 | Temperatur </p> <p><b>Liste der neuen |
---|
515 | Initialisierungsparameter:</b> <br> <table nosave="" border="1"> <caption> <br> </caption><tbody> |
---|
516 | </tbody><tbody> </tbody> <tbody> <tr nosave=""> <td nosave=""><b>Parameter</b></td> |
---|
517 | <td nosave=""><b>Typ</b></td> <td nosave="" width="4%"><b>Default</b></td> |
---|
518 | <td nosave=""><b>Beschreibung</b></td> </tr> |
---|
519 | <tr nosave=""> <td nosave=""><tt>moisture</tt></td> |
---|
520 | <td>L</td> <td>FALSE</td> <td>Ab-/Zuschalten |
---|
521 | des Gesamtwassergerhaltes als neue |
---|
522 | progn. Variable</td> </tr> <tr> <td><tt>cloud_physics</tt></td> |
---|
523 | <td>L</td> <td>FALSE</td> <td>Ab-/Zuschalten |
---|
524 | des Kondensationsschemas</td> </tr> <tr nosave=""> |
---|
525 | <td><tt>radiation</tt></td> <td>L</td> |
---|
526 | <td nosave="">FALSE</td> <td>Ab-/Zuschalten |
---|
527 | des Strahlungsschemas</td> </tr> <tr> <td><tt>precipitation</tt></td> |
---|
528 | <td>L</td> <td>FALSE</td> <td>Ab-/Zuschalten |
---|
529 | der Niderschlagsparametrisierung</td> </tr> <tr> <td><tt>bc_q_b</tt></td> |
---|
530 | <td>C</td> <td>'dirichlet'</td> <td>untere |
---|
531 | Randbedingung für q (siehe auch bc_pt_b)</td> </tr> |
---|
532 | <tr> <td><tt>bc_q_t</tt></td> <td>C</td> |
---|
533 | <td>'neumann'</td> <td>obere RB für q |
---|
534 | (siehe auch bc_pt_t)</td> </tr> <tr> <td><tt>q_surface</tt></td> |
---|
535 | <td>R</td> <td>0.0</td> <td>Feuchtewert |
---|
536 | an der Erdoberfläche</td> </tr> <tr> <td><tt>q_surface_initial_change</tt></td> |
---|
537 | <td>R</td> <td>0.0</td> <td>vgl. |
---|
538 | pt_surface_initial_change</td> </tr> <tr> <td><tt>q_vertical_gradient</tt></td> |
---|
539 | <td>R(10)</td> <td>0.0</td> <td>vgl. |
---|
540 | pt_vertical_gradient</td> </tr> <tr nosave=""> |
---|
541 | <td nosave=""><tt>q_vertical_gradient_level</tt></td> |
---|
542 | <td>R(10)</td> <td>10000.0</td> <td>vgl. |
---|
543 | pt_vertical_gradient_level</td> </tr> <tr> <td><tt>surface_pressure</tt></td> |
---|
544 | <td>R</td> <td>1013.25</td> <td>Luftdruck |
---|
545 | an der Erdoberfläche</td> </tr> <tr> <td><tt>surface_waterflux</tt></td> |
---|
546 | <td>R</td> <td>0.0</td> <td>oberflächennaher |
---|
547 | Wasser/Feuchtefluss</td> </tr> </tbody> </table> |
---|
548 | Fortsetzungsläufe mit Daten, die mit Modellversionen kleiner |
---|
549 | 2.0 |
---|
550 | erzeugt |
---|
551 | wurden, sind aufgrund der erweiterten Initialisierungsparameterliste |
---|
552 | INKOMPATIBEL |
---|
553 | zu den Einleseroutinen der Version 2.0. Ein Update auf Version 2.0 |
---|
554 | sollte |
---|
555 | deshalb nach Abschluss eines kompletten Modelllaufs erfolgen. |
---|
556 | </p> <p><b>Achtung:</b> diese |
---|
557 | Änderungen haben Auswirkungen auf |
---|
558 | den Prognoseverlauf. |
---|
559 | Die Testergebnis-Datei wurde entsprechend geändert.</p> </td> |
---|
560 | <td nosave="" valign="top">modules, parin, |
---|
561 | read_var_list, |
---|
562 | check_parameters, |
---|
563 | init_3d_model, init_1d_model, header, leap_frog. buoyancy, diffusion_e, |
---|
564 | production_e, diffusivities, prandtl_fluxes, boundary_conds, |
---|
565 | asselin_filter, |
---|
566 | swap_timelevels, flow_statistics, plot_2d, plot_3d, write_var_list, |
---|
567 | write_3d_binary <p><b>Neu:</b> <br> |
---|
568 | init_cloud_physics, prognostic_equations, diffusion_s, |
---|
569 | calc_liquid_water_content, |
---|
570 | calc_radiation, calc_precipitation, impact_of_latent_heat, comute_vpt</p> |
---|
571 | </td> </tr> <tr nosave=""> <td nosave="" valign="top">18/02/00</td> <td nosave="" valign="top">MS</td> <td nosave="" valign="top">2.0</td> <td nosave="" valign="top">B/N</td> <td>Im Zuge der |
---|
572 | Umstellung auf Modellversion 2.0 wurden |
---|
573 | noch kleine |
---|
574 | Änderungen an den Unterprogrammen diffusion_e, production_e |
---|
575 | und |
---|
576 | diffusivities |
---|
577 | vorgenommen. In allen genannten <br> |
---|
578 | Unterprogrammen wurde bisher ein strengeres Kriterium zur Bestimmung |
---|
579 | der Schichtungsverhältnisse verwendet. Ein Modellvergleich |
---|
580 | zeigte |
---|
581 | jedoch, dass dadurch die Diffusion im Bereich der Inversion zu gross |
---|
582 | wird. <p>Eine weitere Ergänzung betrifft die |
---|
583 | Advektionsverfahren: <br> |
---|
584 | Das Bott-Chlond Advektionsverfahren ist nun auch für |
---|
585 | Rechnungen |
---|
586 | mit Feuchte/Wolkenphysik verfügbar. </p> <p><b>Achtung:</b> |
---|
587 | diese Änderungen haben Auswirkungen auf |
---|
588 | den Prognoseverlauf. |
---|
589 | Die Testergebnis-Datei wurde entsprechend geändert.</p> </td> |
---|
590 | <td nosave="" valign="top">diffusion_e, |
---|
591 | production_e, |
---|
592 | diffusivities, check_parameters</td> </tr> <tr nosave="" valign="top"> <td nosave="">26/04/00</td> |
---|
593 | <td>SR</td> <td>2.0a</td> <td>C</td> |
---|
594 | <td>Vollständige Umstellung von vtk-Grafik-Software auf |
---|
595 | dvrp-Software. |
---|
596 | Grafik-Ausgaben im dvr-Format sind mittlerweile begrenzt nutzbar |
---|
597 | (Isooberflächen |
---|
598 | sind darstellbar, siehe neue Laufparameter <tt>dt_dvrp, |
---|
599 | threshold</tt>), |
---|
600 | es wird aber in der Anwendung in naher Zukunft noch diverse |
---|
601 | Änderungen |
---|
602 | geben. Partikelausgabe vorerst nicht mehr möglich (Verlagerung |
---|
603 | schon).</td> <td>header, init_particles, init_3d_model, |
---|
604 | leap_frog, modules, |
---|
605 | parin, parles, |
---|
606 | read_var_list, write_var_list <br> <b>Gestrichen:</b> |
---|
607 | <br> |
---|
608 | plot_isosurface, plot_particles <p><b>Neu:</b> |
---|
609 | <br> |
---|
610 | init_dvrp, plot_dvrp</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">26/04/00</td> |
---|
611 | <td>SR</td> <td>2.0a</td> <td>C</td> |
---|
612 | <td>Durch zusätzlichen zyklischen Rand im |
---|
613 | Bott-Chlond-Schema |
---|
614 | sehr |
---|
615 | viele SENDRECV-Aufrufe eingespart. <br> |
---|
616 | Änderung des Namens einer eingelesenen Environment-Variablen |
---|
617 | in <tt>check_open</tt> |
---|
618 | von <tt>remote_addres</tt> nach <tt>return_addres</tt>. |
---|
619 | <br>Prozessor-Topologie kann durch Benutzer vorgegeben werden. |
---|
620 | Dazu neue |
---|
621 | Initialisierungsparameter <tt>npex</tt> und <tt>npey</tt>. |
---|
622 | Durch |
---|
623 | Änderungen |
---|
624 | am Header-Format wurde Testergebnis-Datei geändert.</td> |
---|
625 | <td>advec_s_bc, check_open, header, init_pegrid, modules, parin, |
---|
626 | read_var_list, |
---|
627 | write_var_list</td> </tr> <tr nosave="" valign="top"> <td nosave="">26/04/00</td> |
---|
628 | <td>SR</td> <td>2.0a</td> <td>N</td> |
---|
629 | <td>Rechnungen mit geneigter Oberfläche erlauben jetzt |
---|
630 | die |
---|
631 | Vorgabe |
---|
632 | eines stabil geschichteten Temperaturprofils mit konstantem Gradienten. |
---|
633 | Hinzuschalten von Feuchte funktioniert für Hangrechnungen noch |
---|
634 | nicht.</td> <td>advec_s_bc, buoyancy, init_3d_model, |
---|
635 | modules, |
---|
636 | prognostic_equations <p><b>Neu:</b> <br> |
---|
637 | init_slope</p> </td> </tr> <tr nosave="" valign="top"> <td>13/06/00</td> <td>MS</td> |
---|
638 | <td>2.0a</td> <td nosave="">B</td> <td>Es |
---|
639 | werden nun auch die seitlichen Ränder für ql |
---|
640 | gesetzt. |
---|
641 | Ein Nichtsetzen der Randbedingungen führte zu Fehlern bei der |
---|
642 | Ausgabe |
---|
643 | von pt</td> <td nosave="">calc_liquid_water_content</td> |
---|
644 | </tr> <tr nosave="" valign="top"> <td nosave="">03/07/00</td> <td>SR</td> <td>2.0b</td> |
---|
645 | <td>C</td> <td>Für eine Reihe von |
---|
646 | Unterprogrammen, die innerhalb |
---|
647 | von <tt>prognostic_equation</tt> |
---|
648 | aufgerufen werden und an die Pointer-Variablen übergeben |
---|
649 | werden, |
---|
650 | sind |
---|
651 | jetzt explizite Interfaces vereinbart (neues Modul <tt>pointer_interfaces</tt>). |
---|
652 | Auch im Vereinbarungsteil der entsprechenden Unterprogramme sind diese |
---|
653 | Übergabeparameter jetzt aus Konsistenzgründen (und |
---|
654 | weil es |
---|
655 | sonst |
---|
656 | Laufzeitfehler gibt) als Pointer-Variablen deklariert. Mit dieser |
---|
657 | Änderung |
---|
658 | ist der große Speicher- und CPU-Zeit-Bedarf beim |
---|
659 | Übersetzen |
---|
660 | von prognostic_equations wieder auf ein erträgliches |
---|
661 | Maß |
---|
662 | reduziert. <br> |
---|
663 | Im Rahmen dieser Änderungen wurde auch an diffusion_e ein |
---|
664 | Hilfsfeld |
---|
665 | weniger übergeben. <br> |
---|
666 | Aus nicht vollständig gekärten Gründen haben |
---|
667 | sich die |
---|
668 | Zahlen in der Testergebnis-Datei minimal geändert (und zwar |
---|
669 | die |
---|
670 | Spalte |
---|
671 | mit der Gesamtdivergenz nach Aufruf des Drucklösers).</td> |
---|
672 | <td>advec_s_bc, buoyancy, diffusion_e, diffusion_s, diffusion_u, |
---|
673 | diffusion_v, |
---|
674 | diffusion_w, disturb_field, modules, production_e, prognostic_equations</td> |
---|
675 | </tr> <tr nosave="" valign="top"> <td nosave="">04/07/00</td> <td>SR</td> <td>2.0b</td> |
---|
676 | <td>B</td> <td>Diriclet-Randbedingungen für |
---|
677 | Temperatur und |
---|
678 | Flüssigwassergehalt |
---|
679 | werden gesetzt. Dies wäre bereits nach Einführung der |
---|
680 | Pointer |
---|
681 | zwingend notwendig gewesen. Rechnungen mit vorgegebener |
---|
682 | Oberflächentemperatur |
---|
683 | schlugen deshalb bislang fehl.</td> <td>boundary_conds</td> |
---|
684 | </tr> <tr nosave="" valign="top"> <td nosave="">07/09/00</td> <td>MS</td> <td>2.0b</td> |
---|
685 | <td>B</td> <td>Die virtuelle potenielle Temperatur |
---|
686 | wird nun auch für |
---|
687 | k=nzb und |
---|
688 | k=nzt+1 berechnet, um die Randwerte auch für Ausgabezwecke |
---|
689 | bereichtzustellen. </td> <td>compute_vpt</td> |
---|
690 | </tr> <tr nosave="" valign="top"> <td nosave="">28/12/00</td> <td>SR</td> <td>2.1</td> |
---|
691 | <td>C/N</td> <td>PALM erlaubt jetzt den Einsatz |
---|
692 | optionaler Software-Pakete, |
---|
693 | die zwar |
---|
694 | zum Modell gehören, standardmäßig aber |
---|
695 | nicht mit |
---|
696 | übersetzt |
---|
697 | werden, um so unter anderem Kompilationszeit einzusparen. Siehe neues |
---|
698 | Kapitel |
---|
699 | 3.7 in der Modelldokumentation. <p>Einsatz der |
---|
700 | dvrp-Software wurde vollständig |
---|
701 | überarbeitet. |
---|
702 | Sie ist nun als Software-Paket optional im Modell einsetzbar. Siehe |
---|
703 | überarbeitetes |
---|
704 | Kapitel 4.5.6 in der Modelldokumentation. </p> <p>Die |
---|
705 | Prognose der Partikelverlagerung ist ebenfalls in ein |
---|
706 | optionales |
---|
707 | Software-Paket ausgelagert.</p> </td> <td>advec_particles, |
---|
708 | header, init_3d_model, init_dvrp, |
---|
709 | init_particles, |
---|
710 | init_pegrid, modules, parin, parles, plot_dvrp, prognostic_equations, |
---|
711 | read_var_list, |
---|
712 | write_var_list <p><b>Neu:</b> <br> |
---|
713 | package_parin</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">28/12/00</td> |
---|
714 | <td>SR</td> <td>2.1</td> <td>B</td> |
---|
715 | <td>MPI_FINALIZE ans Ende des Hauptprogramms geschoben (stand |
---|
716 | vorher vor |
---|
717 | cpu_auswertung, wo noch ein Barrier-Aufruf steht). comm2d war zu Beginn |
---|
718 | undefiniert und wird nun erst einmal gleich MPI_COMM_WORLD gesetzt.</td> |
---|
719 | <td>parles</td> </tr> <tr nosave="" valign="top"> <td nosave="">02/01/01</td> |
---|
720 | <td>SR</td> <td>2.1a</td> <td>C</td> |
---|
721 | <td>Offene Dateien werden sobald möglich geschlossen. |
---|
722 | Wiedereröffnung |
---|
723 | bestimmter Dateien mit POSITION='APPEND' möglich. In diesem |
---|
724 | Zusammenhang |
---|
725 | wurde das Unterprogramm close_files in close_file umbenannt und hat nun |
---|
726 | 1 Argument. <br> |
---|
727 | Anpassung der Diffusionsparametrisierung im 1D-Modell an das 3D-Modell.</td> |
---|
728 | <td>advec_particles, check_cpu_time, check_open, cpu_auswertung, |
---|
729 | init_1d_model, |
---|
730 | init_3d_model, init_particles, modules.f90, parin, parles, plot_2d, |
---|
731 | write_3d_binary <p><b>Neu:</b> <br> |
---|
732 | close_file </p> <p><b>Eliminiert:</b> |
---|
733 | <br> |
---|
734 | close_files</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">02/01/01</td> |
---|
735 | <td>SR</td> <td>2.1a</td> <td>B</td> |
---|
736 | <td>Beseitigung kleiner Fehler.</td> <td>check_cpu_time, |
---|
737 | diffusion_e, diffusivities, long_filter, |
---|
738 | production_e</td> </tr> <tr nosave="" valign="top"> <td>05/01/01</td> <td>SR</td> |
---|
739 | <td>2.1b</td> <td>N</td> <td nosave="">Neues |
---|
740 | Software-Paket zur Berechnung von Spektren im |
---|
741 | Ortsraum</td> <td>check_open, header, init_3d_model, |
---|
742 | leap_frog, modules, |
---|
743 | package_parin, |
---|
744 | parles, read_var_list, write_3d_binary, write_var_list <p><b>Neu:</b> |
---|
745 | <br> |
---|
746 | calc_spectra, plot_spectra</p> </td> </tr> <tr valign="top"> <td>25/01/01</td> <td>SR</td> |
---|
747 | <td>2.1c</td> <td>C/N</td> <td>Drucklöser |
---|
748 | kann jetzt die Singleton-FFT benutzen. Modul <tt>singleton</tt> |
---|
749 | wurde deshalb von <tt>calc_spectra.f90</tt> nach <tt>modules.f90</tt> |
---|
750 | geschoben |
---|
751 | (neuer Initialisierungsparameter <tt>fft_method</tt>). |
---|
752 | <br>Flüsse können jetzt bei k=1 |
---|
753 | unabhängig von der |
---|
754 | Verwendung |
---|
755 | einer Prandtl-Schicht vorgegeben werden (neuer |
---|
756 | Initialisierungsparameter <tt>use_surface_fluxes</tt>). |
---|
757 | <br>Modul <tt>test_variables</tt> wurde aus allen |
---|
758 | Programmteilen entfernt. |
---|
759 | Hauptprogramm wurde von parles nach <tt>palm</tt> |
---|
760 | umbenannt. <br> |
---|
761 | Modell kann auf DEC-Workstations eingesetzt werden (-D <tt>dec</tt>). |
---|
762 | <br>Zusätzliche Zeitmessungen mit dvrp-Software. |
---|
763 | Schreiben von |
---|
764 | Partikel-Informationen |
---|
765 | ist optional (neuer Parameter <tt>write_particle_informations</tt>).</td> |
---|
766 | <td>advec_particles, calc_spectra, check_parameters, |
---|
767 | cpu_zeitmessung, diffusion_s, |
---|
768 | header, init_3d_model, init_dvrp, init_particles, leap_frog, modules, |
---|
769 | package_parin, |
---|
770 | parin, poisfft, read_var_list, swap_timelevel, write_var_list |
---|
771 | <p><b>Neu:</b> <br> |
---|
772 | palm </p> <p><b>Eliminiert:</b> <br> |
---|
773 | parles, module_test</p> </td> </tr> <tr valign="top"> <td>25/01/01</td> <td>SR</td> |
---|
774 | <td>2.1c</td> <td>B</td> <td>Fehler |
---|
775 | beim öffnen von Unit 23 beseitigt. Modul <tt>interface</tt> |
---|
776 | fehlte in disturb_field. <br> |
---|
777 | Wertebereich von theta* in Prandtl-Fluxes eingeschränkt, weil |
---|
778 | sonst auf einigen Rechnern overflow droht, wenn u*=0.</td> <td>check_open, |
---|
779 | disturb_field, prandtl_fluxes</td> </tr> <tr valign="top"> <td>30/01/01</td> <td>SR</td> |
---|
780 | <td>2.1d</td> <td>N/C</td> <td>Prognose |
---|
781 | eines passiven Skalars ist möglich (anstatt |
---|
782 | Feuchte), |
---|
783 | dazu neuer Initialisierungsparameter <tt>passive_scalar</tt>. |
---|
784 | <p>Falls kein Pfad für ftpcopy existiert, werden in <tt>check_open</tt> |
---|
785 | die Dateinamen für AVS-Koordinaten- und Datendatei auf |
---|
786 | "unknown" |
---|
787 | gesetzt.</p> </td> <td>asselin_filter, |
---|
788 | boundary_conds, check_open, check_parameters, |
---|
789 | flow_statistics, |
---|
790 | header, init_1d_model, init_3d_model, modules, parin, plot_2d, |
---|
791 | plot_dvrp, |
---|
792 | prandtl_fluxes, prognostic_equations, read_var_list, swap_timelevel, |
---|
793 | write_3d_binary, |
---|
794 | write_var_list</td> </tr> <tr valign="top"> <td>30/01/01</td> |
---|
795 | <td>SR</td> <td>2.1d</td> <td>B</td> |
---|
796 | <td>String-Ausgabe für use_surface_fluxes korrigiert. |
---|
797 | Version vom |
---|
798 | 25/01/01 brach deswegen bei Fortsetzungsläufen ab. <br> |
---|
799 | xy-Plotausgabe von q und ql korrigiert.</td> <td>plot_2d, |
---|
800 | write_var_list</td> </tr> <tr nosave="" valign="top"> <td nosave="">30/03/01</td> |
---|
801 | <td>SR</td> <td>2.2</td> <td>N/C</td> |
---|
802 | <td>Sämtliche 3D-Felder der Zeitebene t+dt wurden |
---|
803 | entfernt. |
---|
804 | Ebenso |
---|
805 | die Arbeitsfelder work und work1. Hilfsfelder wurden soweit |
---|
806 | möglich |
---|
807 | eingespart und werden grundsätzlich lokal allokiert. Dadurch |
---|
808 | konnten |
---|
809 | eine Reihe von Übergabeparametern gestrichen werden (z.B. beim |
---|
810 | Aufruf |
---|
811 | von <tt>pres, advec_s_bc, poisfft, production_e, sor </tt>sowie |
---|
812 | den |
---|
813 | Spline-Unterprogrammen). |
---|
814 | Der Long-Filter wurde in das Upstream-Spline-Verfahren integriert. Da |
---|
815 | der |
---|
816 | Zeitfilter jetzt direkt in der prognostischen Gleichung angewendet wird |
---|
817 | (bisher geschah dies erst nach Aufruf des Drucklösers), haben |
---|
818 | sich |
---|
819 | die Zahlen in der Testergebnis-Datei geändert. Die mittleren |
---|
820 | Profile |
---|
821 | sind aber unbeeinflusst. <p>Eine weitere kleinere |
---|
822 | Änderung der Testergebnis-Daten |
---|
823 | wird dadurch |
---|
824 | verursacht, dass jetzt der Parameter <tt>adjust_mixing_length</tt> |
---|
825 | defaultmäßig <tt>.FALSE.</tt> |
---|
826 | ist und der Mischungsweg grundsätzlich zusätzlich |
---|
827 | auf <tt>0.7 |
---|
828 | * zu</tt> begrenzt wird. Falls <tt>adjust_mixing_length=T</tt>, |
---|
829 | wird jetzt der Mischungsweg in <tt>diffusivities</tt> |
---|
830 | analog zu <tt>diffusion_e</tt> |
---|
831 | an allen Gitterpunkten modifiziert. <b>Achtung: </b>Diese |
---|
832 | Änderungen |
---|
833 | können bei anderen Simulationen t.w. erhebliche Auswirkungen |
---|
834 | auf |
---|
835 | die |
---|
836 | oberflächennahen Ergebnisse haben. </p> <p><b>Kleinere |
---|
837 | Änderungen:</b> In <tt>init_cloud_physics</tt> |
---|
838 | wird |
---|
839 | der Wert der Variablen <tt>surface_pressure</tt> in hPa |
---|
840 | belassen |
---|
841 | (bisher |
---|
842 | Umwandlung in Pa). <br> |
---|
843 | Die Namelist-Namen der Software-Pakete sind t.w. |
---|
844 | geändert. <br> |
---|
845 | Unit 14 (binäre Ausgabe für |
---|
846 | Fortsetzungsläufe) wird |
---|
847 | jetzt im Hauptprogramm geschlossen, damit auf diese Datei noch |
---|
848 | benutzergesteuerte |
---|
849 | Ausgaben erfolgen können. <br> |
---|
850 | Laufparameter werden in keinem Fall mehr auf Unit 14 ausgegeben bzw. |
---|
851 | von Unit 13 gelesen, d.h. sie gelten jetzt tatsächlich nur |
---|
852 | für |
---|
853 | den jeweils aktuellen Lauf. <br> |
---|
854 | Partikeladvektion funktioniert jetzt auch zusammen mit der |
---|
855 | Galilei-Transformation. </p> <p>Restliche |
---|
856 | deutsche Variablen-, Unterprogramm- und Modulnamen |
---|
857 | wurden |
---|
858 | ins Englische übersetzt. Davon sind fast alle Programmteile |
---|
859 | betroffen |
---|
860 | (nicht in rechter Spalte aufgeführt).</p> </td> <td>advec_particles, |
---|
861 | advec_s_bc, advec_s_ups, advec_u_ups, |
---|
862 | advec_v_ups, |
---|
863 | advec_w_ups, boundary_conds, calc_spectra, check_parameters, |
---|
864 | diffusion_e, |
---|
865 | init_3d_model, init_cloud_physics, init_pegrid, init_rankine, |
---|
866 | leap_frog, |
---|
867 | modules, package_parin, palm, parin, poisfft, pres, production_e, |
---|
868 | prognostic_equations, |
---|
869 | read_var_list, sor, swap_timelevel, transpose_*, write_3d_binary, |
---|
870 | write_var_list <p><b>Neu:</b> <br> |
---|
871 | cpu_log, cpu_statistics </p> <p><b>Eliminiert:</b> |
---|
872 | <br> |
---|
873 | asselin_filter, cpu_auswertung, cpu_zeitmessung, long_filter</p> </td> |
---|
874 | </tr> <tr nosave="" valign="top"> <td nosave="">12/07/01</td> <td>SR</td> <td>2.2a</td> |
---|
875 | <td>N/C</td> <td>Defaultwert der unteren |
---|
876 | Randbedingung für die TKE ist ab |
---|
877 | sofort <tt>bc_e_b |
---|
878 | = 'neumann'</tt>. <br> |
---|
879 | Partikelquelle ist über Paketparameter steuerbar. |
---|
880 | Partikeleigenschaften |
---|
881 | sind mittels benutzereigener Software steuerbar. Der dvrp-Ausgabeweg |
---|
882 | ist |
---|
883 | jetzt ebenfalls über Paketparameter steuerbar. <br> |
---|
884 | Allen Modulen (bis auf singleton) wurde eine SAVE-Anweisung |
---|
885 | hinzugefügt, |
---|
886 | damit die durch sie vereinbarten Variablen während der |
---|
887 | Rechnung in |
---|
888 | keinem Fall undefiniert werden können (diese Gefahr besteht |
---|
889 | z.B. |
---|
890 | auf |
---|
891 | SGI-Origin-Maschinen).</td> <td>advec_particles, header, |
---|
892 | init_dvrp, init_particles, |
---|
893 | modules.f90, package_parin, |
---|
894 | plot_dvrp, user_interface</td> </tr> <tr> <td>12/07/01</td> |
---|
895 | <td>SR</td> <td>2.2a</td> <td>B</td> |
---|
896 | <td>Verschiebung der OPEN-Anweisung für Unit 33 |
---|
897 | (AVS-FLD-Datei).</td> <td>check_open</td> </tr> |
---|
898 | <tr nosave="" valign="top"> <td nosave="">20/07/01</td> |
---|
899 | <td>SR</td> <td>2.3</td> <td>N</td> |
---|
900 | <td>Einbau des Mehrgitterverfahrens zur Lösung der |
---|
901 | Poisson-Gleichung.</td> <td>check_parameters, |
---|
902 | exchange_horiz, header, init_grid, |
---|
903 | init_pegrid, modules, |
---|
904 | parin, pres, run_control <p><b>Neu:</b> <br> |
---|
905 | poismg</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">21/08/01</td> |
---|
906 | <td>SR</td> <td>2.3a</td> <td>N/C</td> |
---|
907 | <td>Ergänzung der dvrp-Software: Partikel |
---|
908 | können mit |
---|
909 | Schwänzen |
---|
910 | versehen werden. Die Ausgabe der dvrp-Plotdaten durch einen separaten |
---|
911 | PE |
---|
912 | ist möglich (mrun-Option "<tt>-p dvrp_graphics+1PE</tt>"). |
---|
913 | Der |
---|
914 | Kommunikator <tt>MPI_COMM_WORLD</tt> |
---|
915 | wurde deshalb durch <tt>comm_palm</tt> |
---|
916 | ersetzt. <p>Reduzierung des Mischungsweges im |
---|
917 | Wandbereich kann wahlweise |
---|
918 | abgeschaltet |
---|
919 | werden. Für km und kh wird jetzt eine Neumann-Randbedingung am |
---|
920 | unteren |
---|
921 | Rand verwendet. Die TKE-Energieproduktionsberechnung durch Scherung des |
---|
922 | Grundstroms am unteren Rand wurde verbessert. </p> <p>Generelle |
---|
923 | Verwendung der bodennahen vertikalen |
---|
924 | Impulsflüsse in |
---|
925 | den Diffusionstermen von u und v, immer wenn diese als Randbedingung |
---|
926 | vorgegeben |
---|
927 | sind (gemäß <tt>use_surface_fluxes</tt>, |
---|
928 | - bisher wurde |
---|
929 | dies |
---|
930 | nur bei eingeschalteter Prandtl-Schicht gemacht). Schubspannungen |
---|
931 | können |
---|
932 | jetzt als Randbedingungen vorgegeben werden (allerdings unter |
---|
933 | zuhilfenahme |
---|
934 | benutzereigener Software). </p> <p>Zusätzliche |
---|
935 | Schnittstellen für benutzereigene |
---|
936 | Software in |
---|
937 | allen Tendenztermen, in <tt>flow_statistics,</tt> und |
---|
938 | für |
---|
939 | Partikel- |
---|
940 | bzw. dvrp-Programmteile (Bestimmung von Partikeleigenschaften, |
---|
941 | Festlegung |
---|
942 | von Farbtabellen). </p> <p><b>Achtung: </b>Diese |
---|
943 | Änderungen können bei |
---|
944 | Simulationen mit |
---|
945 | mittlerem Wind durch die Änderungen im bereich des unteren |
---|
946 | Randes |
---|
947 | t.w. erhebliche Auswirkungen auf die oberflächennahen |
---|
948 | Ergebnisse |
---|
949 | haben.</p> </td> <td>advec_particles, diffusion_e, |
---|
950 | diffusion_u, diffusion_v, |
---|
951 | diffusivities, |
---|
952 | flow_statistics, header, init_dvrp, init_particles, init_pegrid, |
---|
953 | leap_frog, |
---|
954 | modules, package_parin, palm, parin, plot_dvrp, production_e, |
---|
955 | prognostic_equations, |
---|
956 | read_var_list, swap_timelevel, user_interface, write_var_list</td> |
---|
957 | </tr> <tr nosave="" valign="top"> <td nosave="">21/08/01</td> <td>SR</td> <td>2.3a</td> |
---|
958 | <td>B</td> <td>Falsche Positionierung von |
---|
959 | MPI_ALLREDUCE in check_cpu_time |
---|
960 | korrigiert.</td> <td>check_cpu_time</td> </tr> |
---|
961 | <tr nosave="" valign="top"> <td nosave="">04/09/01</td> |
---|
962 | <td>SR</td> <td>2.3b</td> <td>N</td> |
---|
963 | <td>Zusätzliche Profilausgaben für |
---|
964 | Energieproduktionsterme möglich. |
---|
965 | Stördruck wird bei der FFT-Methode nicht mehr durch |
---|
966 | Aufsummieren |
---|
967 | der |
---|
968 | Werte zu den einzelnen Zeitschritten ermittelt.</td> <td>check_parameters, |
---|
969 | flow_statistics, modules, pres</td> </tr> <tr nosave="" valign="top"> <td nosave="">04/09/01</td> |
---|
970 | <td>SR</td> <td>2.3b</td> <td>B</td> |
---|
971 | <td>Austausch der Geisterränder für die |
---|
972 | zeitgefilterten |
---|
973 | Felder |
---|
974 | direkt nach Durchführung der Filterung (war fehlerhaft seit |
---|
975 | Entfernen |
---|
976 | der Zeitebene t+dt (Version 2.2) und führte zu sehr kleinen |
---|
977 | Störungen |
---|
978 | an den seitlichen Rändern der Teilgebiete). <p><b>Achtung:</b> |
---|
979 | Der Inhalt der Testergebnis-Datei ändert |
---|
980 | sich durch |
---|
981 | diese Fehlerkorrektur.</p> </td> <td>prognostic_equations</td> |
---|
982 | </tr> <tr nosave="" valign="top"> <td nosave="">09/11/01</td> <td>SR</td> <td>2.3c</td> |
---|
983 | <td>N</td> <td>Farbe entlang der |
---|
984 | Partikelschwänze kann sich |
---|
985 | ändern. Einschalten |
---|
986 | der Partikeladvektion bei Fortsetzungsläufen möglich.</td> |
---|
987 | <td>advec_particles, init_particles, modules, package_parin, |
---|
988 | plot_dvrp</td> </tr> <tr nosave="" valign="top"> |
---|
989 | <td nosave="">16/04/02</td> <td>SR</td> |
---|
990 | <td>2.3d</td> <td>N</td> <td>Vorgabe |
---|
991 | von Randbedingungen für Partikeladvektion |
---|
992 | möglich. |
---|
993 | Partikeldaten können für spätere Analysen |
---|
994 | auf Datei |
---|
995 | geschrieben |
---|
996 | werden (Unit 85). <tt>PARTICLE</tt>-Datentyp |
---|
997 | enthält |
---|
998 | Informationen |
---|
999 | über Partikelgeschwindigkeitskomponenten und |
---|
1000 | Startposition. <p>Skalartransport sowie entsprechende |
---|
1001 | Datenausgaben können |
---|
1002 | durch |
---|
1003 | eigene Parameter gesteuert werden (nicht mehr über die |
---|
1004 | Feuchteparameter). </p> <p>Im Fall von |
---|
1005 | pdims(1)=1 (eindimensionales virtuelles |
---|
1006 | Prozessornetz in |
---|
1007 | y-Richtung) werden die zyklischen Randbedingungen in x-Richtung durch |
---|
1008 | direktes |
---|
1009 | Umspeichern anstatt durch <tt>sendrecv </tt>realisiert. |
---|
1010 | Ebenso |
---|
1011 | werden |
---|
1012 | die Transponierungen xz, yz, zx und zy eingespart (es wird |
---|
1013 | aber |
---|
1014 | weiter |
---|
1015 | umsortiert). </p> <p>Im Fall von |
---|
1016 | 3D-Plotausgaben Aufruf von ftpcopy-Script durch |
---|
1017 | batch_scp-Script |
---|
1018 | ersetzt (dient der Ermittelung von Dateizyklusnummern als Information |
---|
1019 | für |
---|
1020 | die AVS-fld-Datei). </p> <p>Bei fehlerhafter |
---|
1021 | Eröffnung einer CPU_MEASURES-Datei |
---|
1022 | werden erneute |
---|
1023 | Eröffnungsversuche durchgeführt.</p> </td> |
---|
1024 | <td>advec_particles, check_open, check_parameters, |
---|
1025 | exchange_horiz, flow_statistics, |
---|
1026 | header, init_particles, modules, package_parin, parin, plot_2d, |
---|
1027 | plot_3d, |
---|
1028 | prognostic_equations, read_var_list, transpose_xz, transpose_yz, |
---|
1029 | transpose_zx, |
---|
1030 | transpose_zy, write_var_list</td> </tr> <tr nosave="" valign="top"> <td nosave="">02/05/02</td> |
---|
1031 | <td>SR</td> <td>2.3e</td> <td>B</td> |
---|
1032 | <td>Wiedereinführung der 3D-Felder für die |
---|
1033 | Zeitebene |
---|
1034 | t+dt, die |
---|
1035 | notwendig ist, damit in den Diffusionstermen bei Leapfrog-Zeitschritten |
---|
1036 | mit der korrekten Zeitebene t-dt gearbeitet wird. Seit Version 2.2 |
---|
1037 | wurde |
---|
1038 | fälschlicherweise die Zeitebene t+dt verwendet. Asselin-Filter |
---|
1039 | ist |
---|
1040 | jetzt wieder eigenständiges Unterprogramm. <br> |
---|
1041 | Die Wiedereinführung dieser dritten Zeitebene ist auch |
---|
1042 | Voraussetzung |
---|
1043 | für die in der nächsten Version geplante skalare |
---|
1044 | Optimierung. <p>Fehler bei Berechnung von |
---|
1045 | Ausgabezeitpunkten eliminiert (trat |
---|
1046 | auf, wenn |
---|
1047 | bei Fortsetzungsläufen von Ausgabeabständen 0.0 auf |
---|
1048 | von Null |
---|
1049 | verschiedene Werte gewechselt werden sollte). </p> <p><b>Achtung:</b> |
---|
1050 | Der Inhalt der Testergebnis-Datei ändert |
---|
1051 | sich durch |
---|
1052 | diese Fehlerkorrektur.</p> </td> <td>init_3d_model, |
---|
1053 | leap_frog, modules, prognostic_equations, |
---|
1054 | swap_timelevel <p><b>Neu:</b> <br> |
---|
1055 | asselin_filter</p> </td> </tr> <tr nosave="" valign="top"> <td>02/05/02</td> <td>SR</td> |
---|
1056 | <td>2.3e</td> <td>N/C</td> <td>Kleinere |
---|
1057 | Anpassungen an IBM-Regatta-Systeme in |
---|
1058 | check_parameters, cpu_log. <p>Modul singleton in |
---|
1059 | eigenständige Datei |
---|
1060 | überführt. </p> <p>Global_min_max |
---|
1061 | arbeitet mit REAL*4, um Komplikationen auf |
---|
1062 | 32-bit-Rechnern |
---|
1063 | zu vermeiden (Datentyp MPI_2REAL müsste dort sonst auf |
---|
1064 | MPI_2DOUBLE_PRECISION |
---|
1065 | geändert werden). <br> |
---|
1066 | Horizontale Geschwindigkeitskomponenten für Partikeladvektion |
---|
1067 | werden exakt zwischen den jeweils benachbarten horizontalen |
---|
1068 | Gitterflächen |
---|
1069 | interpoliert.</p> </td> <td nosave="">advec_particles, |
---|
1070 | check_parameters, cpu_log, |
---|
1071 | global_min_max, |
---|
1072 | modules <p><b>Neu:</b> <br> |
---|
1073 | singleton</p> </td> </tr> <tr nosave="" valign="top"> <td nosave="">11/06/02</td> |
---|
1074 | <td>SR</td> <td>2.4</td> <td>N/C</td> |
---|
1075 | <td>Optimierung und Anpassungen für einzelne Knoten der |
---|
1076 | IBM-Regatta-Systeme. <p><b>Skalare (Cache) Optimierung:</b> |
---|
1077 | Tendenzterme werden |
---|
1078 | innerhalb einer |
---|
1079 | großen (i,j)-Schleife berechnet, die nun jeweils die gesamte |
---|
1080 | prognostische |
---|
1081 | Gleichung umfasst. Schleifenindices i und j werden an die |
---|
1082 | Tendenzunterprogramme |
---|
1083 | als Argumente übergeben. Die Tendenzunterprogramme sind als |
---|
1084 | Module |
---|
1085 | geschrieben, die mittels Technik der überladenen Funktionen |
---|
1086 | auch |
---|
1087 | ohne |
---|
1088 | diese Indices i und j aufgerufen werden können, und dann wie |
---|
1089 | in |
---|
1090 | früheren |
---|
1091 | Versionen funktionieren (d.h. in ihnen laufen die Schleifen |
---|
1092 | über |
---|
1093 | alle |
---|
1094 | 3 Dimensionen). Solche Teile der prognostischen Gleichungen, die |
---|
1095 | globale |
---|
1096 | Kommunikation beinhalten, sind vor die (i,j)-Schleife gezogen. Falls |
---|
1097 | ausschließlich |
---|
1098 | mit Piascek-Williams-Advektion gearbeitet wird, werden alle |
---|
1099 | prognostischen |
---|
1100 | Gleichungen in einer einzigen (i,j)-Schleife gerechnet. </p> <p><b>Kommunikationsoptimierung:</b> |
---|
1101 | Zusätzliche |
---|
1102 | Implementierung einer |
---|
1103 | 1D-Gebietszerlegung in x-Richtung. Mit dem neuen direkten |
---|
1104 | Drucklöser |
---|
1105 | (poisfft_hybrid) werden dadurch 4 von 6 notwendigen Transpositionen |
---|
1106 | eingespart. |
---|
1107 | Die 1D-Zerlegung wird automatisch bei Verwendung dieses neuen |
---|
1108 | Lösers |
---|
1109 | aktiviert. Austausch von Geisterrändern in y-Richtung wird bei |
---|
1110 | dieser |
---|
1111 | 1D-Zerlegung durch einfache zyklische Randbedingungen ersetzt. </p> |
---|
1112 | <p><b>Kleinere Anpassungen:</b> String-Vergleiche |
---|
1113 | erfordern beim |
---|
1114 | IBM-Compiler |
---|
1115 | in der Regel den Einsatz der TRIM-Funktion, um |
---|
1116 | überschüssige |
---|
1117 | Blanks am Ende des Strings abzuschneiden (sonst liefert der Vergleich |
---|
1118 | .F.). <br> |
---|
1119 | Lokal allokierte Felder t.w. in sogenannte automatische Felder |
---|
1120 | umgewandelt |
---|
1121 | (günstiger, um Gefahr von eventuellen Speicherlecks zu |
---|
1122 | vermeiden). |
---|
1123 | Einige Feldoperationen wurden wegen schlechter Performance auf der IBM |
---|
1124 | entfernt (s. pres). </p> <p><b>Achtung: </b>Die |
---|
1125 | Übersetzung des Modells erfordert |
---|
1126 | aufgrund |
---|
1127 | der Vielzahl nunmehr eingesetzter Module die Verwendung des |
---|
1128 | make-Mechanismus, |
---|
1129 | um die korrekte Reihenfolge bei der Übersetzung der |
---|
1130 | Programmteile |
---|
1131 | zu gewährleisten. Die Beschreibung dieser |
---|
1132 | Abhängigkeiten |
---|
1133 | erfolgt |
---|
1134 | in der Datei<tt> Makefile</tt>, die zusammen mit den |
---|
1135 | Programmdateien |
---|
1136 | abgelegt |
---|
1137 | ist und ebenfalls unter RCS-Verwaltung steht. </p> <p>Im |
---|
1138 | User-Interface ist das Unterprogramm<tt> user_actions </tt>nun |
---|
1139 | ebenfalls |
---|
1140 | als Modul geschrieben und bedient sich der Methode der |
---|
1141 | überladenen |
---|
1142 | Funktionen. Existierende benutzereigene Software muss entsprechend |
---|
1143 | angepasst |
---|
1144 | werden.</p> </td> <td>advec_s_pw, advec_s_up, |
---|
1145 | advec_u_pw, advec_u_up, advec_v_pw, |
---|
1146 | advec_v_up, |
---|
1147 | advec_w_pw, advec_w_up, buoyancy, calc_precipitation, calc_radiation, |
---|
1148 | calc_spectra, |
---|
1149 | check_parameters, coriolis, diffusion_e, diffusion_s, diffusion_u, |
---|
1150 | diffusion_v, |
---|
1151 | diffusion_w, diffusivities, exchange_horiz, exchange_horiz_2d, |
---|
1152 | global_min_max, |
---|
1153 | header, impact_of_latent_heat, init_pegrid, leap_frog, modules, |
---|
1154 | plot_2d, |
---|
1155 | plot_3d, plot_spectra, poisfft, pres, production_e, |
---|
1156 | prognostic_equations, |
---|
1157 | user_interface, <p><b>Neu:</b> <br> |
---|
1158 | fft_for_1d_decomp, Makefile, poisfft_hybrid, </p> </td> |
---|
1159 | </tr> <tr nosave="" valign="top"> <td nosave="">11/06/02</td> <td>SR</td> <td>2.4</td> |
---|
1160 | <td>B</td> <td>Fehlende Variablenvereinbarung in <tt>advec_particles</tt> |
---|
1161 | ergänzt.</td> <td>advec_particles</td> </tr> |
---|
1162 | <tr> <td valign="top">12/09/02</td> <td valign="top">SR</td> <td valign="top">2.4a</td> |
---|
1163 | <td valign="top">N</td> <td valign="top">Partikel |
---|
1164 | können mit Trägheit versehen |
---|
1165 | werden und |
---|
1166 | einen Dichteunterschied zum umgebenden Fluid haben. Zur Steuerung dient |
---|
1167 | der neue Paketparameter <tt>density_ratio</tt>.</td> |
---|
1168 | <td valign="top">advec_particles, header, init_particles, |
---|
1169 | modules, package_parin</td> </tr> <tr> <td valign="top">12/09/02</td> <td valign="top">SR</td> |
---|
1170 | <td valign="top">2.4a</td> <td valign="top">B</td> |
---|
1171 | <td valign="top">Fehler in Berechnung der Anfangsprofile |
---|
1172 | von pt |
---|
1173 | und q entfernt |
---|
1174 | (obere Feldgrenze von 10 konnte in <tt>pt_vertical_gradient_level_ind</tt> |
---|
1175 | überschritten werden). Fehler führte unter |
---|
1176 | Umständen zu |
---|
1177 | "segmentation fault" bei Verwendung sehr großer |
---|
1178 | Gitterpunktzahlen |
---|
1179 | in z-Richtung. <p>Fehler in Berechnung der v-Komponente am |
---|
1180 | unteren Rand |
---|
1181 | entfernt, die |
---|
1182 | für den Scherungsproduktionsterm der TKE verwendet wird |
---|
1183 | (Variable |
---|
1184 | v_0). Fälschlicherweise wurde zur Berechnung u(k=1) statt |
---|
1185 | v(k=1) |
---|
1186 | verwendet.</p> </td> <td valign="top">check_parameters, |
---|
1187 | modules, production_e</td> </tr> <tr> <td valign="top">19/12/02</td> <td valign="top">SR</td> |
---|
1188 | <td valign="top">2.5</td> <td valign="top">N</td> |
---|
1189 | <td valign="top">Restart times can be set by user with new |
---|
1190 | runtime (d3par) |
---|
1191 | parameters <tt>restart_time</tt> and <tt>dt_restart</tt>. |
---|
1192 | Run |
---|
1193 | description |
---|
1194 | header is written on file CONTINUE_RUN. Output of cpu statistics |
---|
1195 | changed |
---|
1196 | (PE results are now collected on PE0 in order to calculate mean cpu |
---|
1197 | statistics). |
---|
1198 | Output of warnings in the job protocol in case of negative measured |
---|
1199 | cpu-times. |
---|
1200 | Remaining cpu-time is also evaluated on IBM-Regatta.</td> <td valign="top">cpu_log, cpu_statistics, |
---|
1201 | check_parameters,header, leap_frog, |
---|
1202 | local_tremain, local_tremain_ini, modules, palm, <p><b>new:</b> |
---|
1203 | <br> |
---|
1204 | check_for_restart </p> <p><b>deleted:</b> <br> |
---|
1205 | check_cpu_time</p> </td> </tr> <tr> <td valign="top"> <br> </td> <td valign="top"> <br> </td> <td valign="top"> <br> </td> <td valign="top">C</td> <td valign="top">Unit |
---|
1206 | 14 (BINOUT) must be opened using a special |
---|
1207 | process |
---|
1208 | id string, because on IBM, the PE rank differs between communicators |
---|
1209 | MPI_COMM_WORLD |
---|
1210 | and comm_2d. This leads to a mismatch between filename-PE-number and |
---|
1211 | PE-number |
---|
1212 | written on file. As the consequence, these files could not be read by |
---|
1213 | restart-jobs. |
---|
1214 | Reading of array <tt>hom</tt> moved from <tt>init_3d_model |
---|
1215 | </tt>to <tt>read_var_list</tt> |
---|
1216 | (binary version number incremented to 2.2). <p><b>Further |
---|
1217 | optimization for IBM-Regatta-systems:</b> <br> |
---|
1218 | Additional optimization of the hybrid-solver for multinode usage |
---|
1219 | (overlapping |
---|
1220 | of communication and computation). </p> <p>Further cache |
---|
1221 | optimization by using strides and joining loops (<tt>hybrid_solver, |
---|
1222 | pres</tt> and <tt>timestep</tt>). Joining of |
---|
1223 | MPI_ALLREDUCE calls in |
---|
1224 | timestep. </p> <p>In case of 1d-decomposition along x |
---|
1225 | only a part of the |
---|
1226 | integral divisor |
---|
1227 | conditions is checked, on IBM hosts a 1d-decomposition along x is the |
---|
1228 | default, |
---|
1229 | a switch from Poisson-FFT-solver to the hybrid-solver is made in case |
---|
1230 | of |
---|
1231 | 1d-decomposition along x, the hybrid-solver does not force a |
---|
1232 | 1d-decomposition |
---|
1233 | any more. </p> <p>Array notation changed to do-loop |
---|
1234 | constructs due to better |
---|
1235 | performance. </p> <p>Cyclic boundary conditions along <tt>y</tt> |
---|
1236 | used instead of |
---|
1237 | sendrecv |
---|
1238 | in case of a 1d-decomposition along <tt>x</tt>. SENDRECV |
---|
1239 | replaced by |
---|
1240 | nonblocking |
---|
1241 | routines ISEND and IRECV in <tt>exchange_horiz.f90</tt>. </p> |
---|
1242 | <p>Speed optimization by removing MINVAL/MAXVAL calls and by |
---|
1243 | handling <br> |
---|
1244 | the "abs" case in a different way than the min/max cases (routine <tt>global_min_max</tt>).</p> |
---|
1245 | </td> <td valign="top">asselin_filter, check_open, |
---|
1246 | exchange_horiz, |
---|
1247 | global_min_max, |
---|
1248 | init_3d_model, init_pegrid, parin, poisfft_hybrid, read_var_list, |
---|
1249 | timestep, |
---|
1250 | write_3d_binary, write_var_list</td> </tr> <tr> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1251 | </td> <td valign="top"><br> </td> <td valign="top">B</td> <td valign="top">Correction |
---|
1252 | of mixing length term (l(k)/ll(k)). |
---|
1253 | The condition |
---|
1254 | kh=3*km in the unstable case is now also exactly met in the wall |
---|
1255 | adjustment |
---|
1256 | region. Factor 0.7 in wall adjustment part replaced by variable <tt>wall_adjustment_factor</tt>, |
---|
1257 | which is set to 1.8 in <tt>modules.f90</tt>. The factor |
---|
1258 | 0.7 was the |
---|
1259 | possible |
---|
1260 | reason for 2-delta-x-waves, which were observed since version 2.1d. <p>Calculation |
---|
1261 | of deformation tensor re-designed (<tt>production_e</tt>). </p> |
---|
1262 | <p>STOP statements replaced by call of new subroutine <tt>local_stop, |
---|
1263 | </tt>where |
---|
1264 | MPI_FINALIZE is called before STOP in case of a parallel environment. </p> |
---|
1265 | <p>ISO2D parameter dp set to true for ibm hosts. </p> <p>tend=p |
---|
1266 | added in <tt>pres</tt> after calling sor method.</p> |
---|
1267 | </td> <td valign="top">advec_s_bc, buoyancy, |
---|
1268 | check_open, |
---|
1269 | check_parameters, close_file, |
---|
1270 | coriolis, diffusion_e, diffusivities, fft_for_1d_decomp, |
---|
1271 | flow_statistics, |
---|
1272 | init_3d_model, init_dvrp, init_grid, init_particles, init_pegrid, |
---|
1273 | parin, |
---|
1274 | plot_2d, poisfft, pres, read_var_list, user_interface, <p><b>new:</b> |
---|
1275 | <br> |
---|
1276 | local_stop, production_e</p> </td> </tr> <tr> |
---|
1277 | <td valign="top">03/03/03</td> <td valign="top">SR</td> |
---|
1278 | <td valign="top">2.5a</td> <td valign="top">N</td> |
---|
1279 | <td valign="top">Particle velocities are also stored in |
---|
1280 | array |
---|
1281 | particles in |
---|
1282 | case of zero density ratio. Steering of variables by dvrp browser |
---|
1283 | included.</td> <td valign="top">advec_particles, |
---|
1284 | init_dvrp, modules,</td> </tr> <tr> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1285 | </td> <td valign="top"><br> </td> <td valign="top">C</td> <td valign="top">AVS |
---|
1286 | data format changed from float to xdr_float |
---|
1287 | (needed |
---|
1288 | on linux machines <br> |
---|
1289 | due to the little/big endian problem). Updates for new version of dvrp |
---|
1290 | software (e.g. using module dvrp is now mandatory).</td> <td valign="top">close_file, init_dvrp, leap_frog, plot_dvrp</td> |
---|
1291 | </tr> <tr> <td valign="top"><br> </td> |
---|
1292 | <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top">B</td> |
---|
1293 | <td valign="top">Error in particle inertia part removed |
---|
1294 | (exp_arg |
---|
1295 | must not |
---|
1296 | contain the timestep). <br> |
---|
1297 | Error in calculation of the vertical flux of resolved scale energy |
---|
1298 | (profile 57) removed. Displacement for integers in mpi_particle_type |
---|
1299 | reduced |
---|
1300 | from 16 to 8 on ibm.</td> <td valign="top">advec_particles, |
---|
1301 | flow_statistics, init_particles</td> </tr> <tr> <td valign="top">12/03/03</td> <td valign="top">SR</td> |
---|
1302 | <td valign="top">2.6</td> <td valign="top">N</td> |
---|
1303 | <td valign="top"><b>Version optimized for NEC-SX6 |
---|
1304 | parallel-vector |
---|
1305 | machines. </b> <p>There are two main changes. A |
---|
1306 | new vectorizable routine <tt>prognostic_equations_vec</tt> |
---|
1307 | is added, where cache optimizations are undone. The tendency |
---|
1308 | subroutines |
---|
1309 | called by <tt>prognostic_equations_vec</tt> contain the |
---|
1310 | full 3d-loops |
---|
1311 | (compared |
---|
1312 | with the cache-optimized versions where only loops over k are carried |
---|
1313 | out). |
---|
1314 | Additionally, a new pressure solver <tt>poisfft_hybrid_vec</tt> |
---|
1315 | is |
---|
1316 | added, |
---|
1317 | which requires a 1d-domain-decomposition (like poisfft_hybrid). In this |
---|
1318 | solver, a very fast FFT from Clive Temperton (ECMWF) is |
---|
1319 | optionally |
---|
1320 | available by choosing <tt>fft_method </tt>= <i>'temperton-algorithm'</i>. |
---|
1321 | </p> <p>Additional changes in <tt>flow_statistics</tt> |
---|
1322 | to allow |
---|
1323 | better vectorization. </p> <p>Small changes in routines <tt>diffusivities</tt> |
---|
1324 | and <tt>pres</tt> |
---|
1325 | which |
---|
1326 | caused run time errors on IBM and NEC due to compiler problems. </p> |
---|
1327 | <p>Reading of environment variable <tt>tasks_per_node</tt> |
---|
1328 | moved |
---|
1329 | from routine <tt>poisfft_hybrid</tt> |
---|
1330 | to routine <tt>parin</tt>. </p> <p><b>Changes |
---|
1331 | in makefile:</b> modules and user_interface now |
---|
1332 | depend on |
---|
1333 | the f90 files, dependency of singleton added, LDFLAGS moved to the end |
---|
1334 | of PROG rule, temperton_fft added.</p> </td> <td valign="top">advec_s_pw, advec_s_up, advec_u_pw, advec_u_up, |
---|
1335 | advec_v_pw, |
---|
1336 | advec_v_up, advec_w_pw, advec_w_up, buoyancy, calc_precipitation, |
---|
1337 | calc_radiation, |
---|
1338 | check_parameters, coriolis, cpu_log, diffusion_e, diffusion_s, |
---|
1339 | diffusion_u, |
---|
1340 | diffusion_v, diffusion_w, diffusivities, fft_for_1d_decomp, header, |
---|
1341 | impact_of_latent_heat, |
---|
1342 | init_pegrid, leap_frog, local_tremain, modules, parin, poisfft, |
---|
1343 | poisfft_hybrid, |
---|
1344 | pres, production_e, prognostic_equations, user_interface <p><b>new:</b> |
---|
1345 | <br> |
---|
1346 | temperton_fft</p> </td> </tr> <tr> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1347 | </td> <td valign="top"><br> </td> <td valign="top">B</td> <td valign="top">tend=p |
---|
1348 | added in routine <tt>pres</tt> after |
---|
1349 | calling sor |
---|
1350 | method.</td> <td valign="top">pres</td> </tr> |
---|
1351 | <tr> <td valign="top">14/03/03</td> <td valign="top">SR</td> <td valign="top">2.6a</td> |
---|
1352 | <td valign="top">N</td> <td valign="top">Additional |
---|
1353 | vector optimization for NEC-SX6. <p>Optional system-specific |
---|
1354 | random number generator available |
---|
1355 | (for equal |
---|
1356 | distributed numbers). </p> <p>Define strings in all |
---|
1357 | relevant subroutines changed from </p> <p><tt> |
---|
1358 | #if defined( define_string )</tt> </p> <p>to </p> |
---|
1359 | <p><tt> #if |
---|
1360 | defined( __define_string )</tt> </p> <p><b>Caution: |
---|
1361 | </b>The relevant subroutines are NOT listed in |
---|
1362 | the right |
---|
1363 | column!</p> </td> <td valign="top">asselin_filter, |
---|
1364 | check_parameters, diffusion_e, |
---|
1365 | diffusivities, |
---|
1366 | disturb_field, global_min_max, header, local_tremain, modules, parin, |
---|
1367 | poisfft_hybrid, |
---|
1368 | pres, read_var_list, write_var_list</td> </tr> <tr> |
---|
1369 | <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1370 | </td> <td valign="top">B</td> <td valign="top">Error in particle boundary condition removed |
---|
1371 | (velocity must |
---|
1372 | be inverted in case of reflection)</td> <td valign="top">advec_particles</td> |
---|
1373 | </tr> <tr> <td valign="top">16/04/03</td> |
---|
1374 | <td valign="top">SR</td> <td valign="top">2.6b</td> |
---|
1375 | <td valign="top">N</td> <td valign="top">Time |
---|
1376 | series output of Monin Obukhov length. <p>Temperton fft can now |
---|
1377 | be used for all hosts and every domain |
---|
1378 | decomposition. |
---|
1379 | Abort in case of Temperton fft, if number of gridpoints along x and/or |
---|
1380 | y contain illegal factors. </p> <p>Index values |
---|
1381 | for the extrema found in global_min_max are |
---|
1382 | limited to |
---|
1383 | the range 0..nx, 0..ny (on IBM machines -1 and nx+1/ny+1 occured which |
---|
1384 | produced different RUN_CONTROL output compared to other machines). </p> |
---|
1385 | <p>Output format of iteration count in routine run_control |
---|
1386 | enlarged.</p> </td> <td valign="top">check_parameters, |
---|
1387 | fft_for_1d_decomp, |
---|
1388 | global_min_max, init_pegrid, |
---|
1389 | modules, plot_ts, poisfft, run_control, temperton_fft</td> </tr> |
---|
1390 | <tr> <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1391 | </td> <td valign="top">B</td> <td valign="top">Additional checks of variables <tt>hybrid_solver</tt> |
---|
1392 | and <tt>host</tt> |
---|
1393 | (<tt>hybrid_solver</tt> must not be used for a |
---|
1394 | 2d-domain-decomposition, <tt>host</tt> |
---|
1395 | should be set by setting environment variable <tt>localhost</tt>). |
---|
1396 | <p>Header output for mixing length limitations revised.</p> |
---|
1397 | </td> <td valign="top">check_parameters, header</td> |
---|
1398 | </tr> <tr> <td valign="top">09/05/03</td> |
---|
1399 | <td valign="top">SR</td> <td valign="top">2.7</td> |
---|
1400 | <td valign="top">N</td> <td valign="top"><b>Version |
---|
1401 | running on Linux Clusters using MPICH |
---|
1402 | and Intel |
---|
1403 | FORTRAN compiler (ifc)</b> <p>So far, only absolutely |
---|
1404 | neccessary changes have been done |
---|
1405 | (possible |
---|
1406 | optimizations will follow in a later version): </p> <p>New |
---|
1407 | time measurements for Linux (ifc) environment added. </p> <p>Some |
---|
1408 | parameters in MPI calls had to be modified (arrays had to |
---|
1409 | be replaced |
---|
1410 | by the first element of the regarding array) in order to fulfill f90 |
---|
1411 | type |
---|
1412 | and rank requirements, since on the MUK-cluster a FORTRAN90-version of |
---|
1413 | MPI is used. This also required to replace "mpif.h" by using a special |
---|
1414 | module (named <tt>mpi</tt>). I did not find out |
---|
1415 | how character |
---|
1416 | strings |
---|
1417 | can be send with MPI. Therefore, these strings are transformed to |
---|
1418 | integers, |
---|
1419 | before they are send, and transformed back to characters on the |
---|
1420 | receiving |
---|
1421 | PE. </p> <p>On the MUK-cluster, only PE0 is able to read |
---|
1422 | the values of |
---|
1423 | environment |
---|
1424 | variables. Therefore, these values are communicated via broadcast to |
---|
1425 | the |
---|
1426 | other PEs. </p> <p>1d-decomposition is set as the default |
---|
1427 | on Linux Clusters. |
---|
1428 | Character |
---|
1429 | strings have to be transformed to integer </p> <p>Smaller |
---|
1430 | changes: </p> <p>Batch_scp paths for IBM, NEC and Linux |
---|
1431 | added</p> </td> <td valign="top">check_open, |
---|
1432 | cpu_log, flow_statistics, |
---|
1433 | init_pegrid, local_getenv, |
---|
1434 | modules, palm, poisfft_hybrid</td> </tr> <tr> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1435 | </td> <td valign="top"><br> </td> <td valign="top">B</td> <td valign="top">Measurements |
---|
1436 | on IBM are now using function <tt>irtc</tt>, |
---|
1437 | which allows correct measurements for jobs running over the 24:00 |
---|
1438 | timeline.</td> <td valign="top">cpu_log, |
---|
1439 | local_tremain, local_tremain_ini</td> </tr> <tr> <td valign="top">01/08/03</td> <td valign="top">SR</td> |
---|
1440 | <td valign="top">2.7a</td> <td valign="top">B</td> |
---|
1441 | <td valign="top">Check that the number processors is also |
---|
1442 | an |
---|
1443 | integral divisor |
---|
1444 | of the number of gridpoints along y in case of a |
---|
1445 | 1d-decomposition |
---|
1446 | along x. <p>Error concerning the multinode-version of |
---|
1447 | poisfft_hybrid |
---|
1448 | removed. It |
---|
1449 | was caused by the Linux changes of version 2.7 and led to program abort |
---|
1450 | due to MPI errors in <tt>MPI_ALLTOALL</tt>. </p> <p>No |
---|
1451 | abort on t3e-systems if system specific routines are used. </p> <p>Array<tt> |
---|
1452 | sums </tt>is initialized in<tt> init_3d_model </tt>before |
---|
1453 | the first call of<tt> pres</tt>. Call of<tt> |
---|
1454 | init_cloud_physics </tt>moved |
---|
1455 | before<tt> init_particles</tt>.</p> </td> <td valign="top">fft_1dd_init, init_3d_model, init_pegrid, |
---|
1456 | poisfft_hybrid</td> </tr> <tr> <td valign="top"><br> |
---|
1457 | </td> <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top">N</td> |
---|
1458 | <td valign="top">Interactive steering of dvrp-graphic |
---|
1459 | features by |
---|
1460 | dvrp-browser |
---|
1461 | plugin extended (position of slicers, threshold values of isosurfaces) |
---|
1462 | . New dvrp_graphics package parameter<tt> slicer_range_limits_dvrp</tt>.</td> |
---|
1463 | <td valign="top">init_dvrp, modules, package_parin, |
---|
1464 | plot_dvrp</td> </tr> <tr> <td valign="top">29/10/03</td> |
---|
1465 | <td valign="top">SR</td> <td valign="top">2.7b</td> |
---|
1466 | <td valign="top">N</td> <td valign="top">In |
---|
1467 | the multigrid method, on a defined level, |
---|
1468 | data are gathered |
---|
1469 | on PE0 and further calculations are carried out only on this PE. New<tt> |
---|
1470 | d3par </tt>parameter <tt>mg_switch_to_pe0_level</tt>. |
---|
1471 | <p>Particle groups implemented. New data type<tt> |
---|
1472 | particle_groups_type </tt>and data type<tt> particle_type </tt>modified. |
---|
1473 | Version |
---|
1474 | numbers are |
---|
1475 | output on the particle files. New<tt> particles_par </tt>parameter<tt> |
---|
1476 | diameter</tt>. Parameter name<tt> uniform_psize</tt> |
---|
1477 | changed to<tt> |
---|
1478 | dvrp_psize</tt>. |
---|
1479 | Parameters<tt> density_ratio </tt>is now an array.</p> |
---|
1480 | </td> <td valign="top">advec_particles, check_open, |
---|
1481 | exchange_horiz, |
---|
1482 | header, init_particles, |
---|
1483 | init_pegrid, modules, package_parin, parin, poismg</td> </tr> |
---|
1484 | <tr> <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1485 | </td> <td valign="top">C</td> <td valign="top">Random number generator from numerical recipes |
---|
1486 | is now rewritten |
---|
1487 | as a module. In restart runs the seed of this generator is set to the |
---|
1488 | last |
---|
1489 | values of the previous run in order to keep the sequence of the random |
---|
1490 | numbers. New binary version 2.2. <p>Buffer is flushed for file |
---|
1491 | RUN_CONTROL immediately after every |
---|
1492 | output |
---|
1493 | on IBM and Linux cluster.</p> </td> <td valign="top">advec_particles, |
---|
1494 | disturb_field, init_3d_model, |
---|
1495 | init_particles, |
---|
1496 | random_function, random_gauss, run_control, write_3d_binary</td> </tr> |
---|
1497 | <tr> <td valign="top"><br> </td> <td valign="top"><br> </td> <td valign="top"><br> |
---|
1498 | </td> <td valign="top">E</td> <td valign="top">In routine buoyance, horizontal mean |
---|
1499 | temperature |
---|
1500 | is now |
---|
1501 | taken from array hom instead of array sums (otherwise inconsistence in |
---|
1502 | case of using more than one statistical region). <p>Information |
---|
1503 | about the time of the last timestep change added |
---|
1504 | to the |
---|
1505 | restart file. </p> <p>System call of<tt> batch_scp </tt>on |
---|
1506 | IBM corrected.</p> </td> <td valign="top">buoyancy, |
---|
1507 | check_open, read_var_list, |
---|
1508 | write_var_list</td> </tr> <tr> <td style="vertical-align: top;">28/01/04</td> <td style="vertical-align: top;">SR</td> <td style="vertical-align: top;">2.8</td> <td style="vertical-align: top;">N</td> <td style="vertical-align: top;">Runge-Kutta schemes (2nd and |
---|
1509 | 3rd |
---|
1510 | order) |
---|
1511 | for time integration implemented. The third order scheme is the new |
---|
1512 | default. |
---|
1513 | It allows the timestep to be 0.9*CFL, which is much larger than for the |
---|
1514 | former default leapfrog scheme. The intermediate steps, which |
---|
1515 | are |
---|
1516 | part of these schemes, are realized by an additional loop within routine<span style="font-family: monospace;"> |
---|
1517 | time_integration </span>(currently<span style="font-family: monospace;"> |
---|
1518 | leap_frog</span>, but this routine will be renamed soon). |
---|
1519 | Steering |
---|
1520 | variables<span style="font-family: monospace;"> |
---|
1521 | at </span>and<span style="font-family: monospace;"> |
---|
1522 | bt </span>have |
---|
1523 | been replaced by array<span style="font-family: monospace;"> |
---|
1524 | sct</span>. |
---|
1525 | , which is particularly used in the prognostic equations. Values of |
---|
1526 | this |
---|
1527 | steering array are calculated within the new routine<span style="font-family: monospace;"> |
---|
1528 | timestep_scheme_steering</span>. <p>When using Runge-Kutta |
---|
1529 | schemes, the timestep increment |
---|
1530 | is freely |
---|
1531 | allowed to adjust after each timestep (the older schemes are using some |
---|
1532 | restrictions, see routine<span style="font-family: monospace;"> |
---|
1533 | timestep</span>). |
---|
1534 | Also, routine<span style="font-family: monospace;"> |
---|
1535 | run_control </span>is |
---|
1536 | not automatically called in case of timestep changes, when Runge-Kutta |
---|
1537 | schemes are switched on. </p> <p>The old leapfrog scheme |
---|
1538 | is still implemented and should |
---|
1539 | produce the |
---|
1540 | same results as in the previous version(s)! </p> <p>Depending |
---|
1541 | on the user experience, further adjustments to the |
---|
1542 | Runge-Kutta |
---|
1543 | schemes may be necessary within the next minor versions. </p> |
---|
1544 | <p><span style="font-weight: bold;">Attention:</span> |
---|
1545 | <br> |
---|
1546 | The content of the testresult-file (run control output) has |
---|
1547 | significantly |
---|
1548 | changed due to the new default timestep scheme!</p> </td> <td style="vertical-align: top;">check_parameters, header, |
---|
1549 | init_3d_model, |
---|
1550 | init_rankine, leap_frog, modules, prognostic_equations, read_var_list, |
---|
1551 | swap_timelevel, timestep, write_var_list <p><span style="font-weight: bold;">new:</span> <br> |
---|
1552 | timestep_scheme_steering</p> </td> </tr> <tr> |
---|
1553 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C</td> <td style="vertical-align: top;">Output of particle infos in |
---|
1554 | subroutine<span style="font-family: monospace;"> |
---|
1555 | allocate_prt_memory </span>on demand only. <p>Type<span style="font-family: monospace;"> log </span>(used |
---|
1556 | for |
---|
1557 | cpu time measurements) changed to<span style="font-family: monospace;"> |
---|
1558 | logpoint </span>due to name conflict with FORTRAN |
---|
1559 | intrinsic<span style="font-family: monospace;"> |
---|
1560 | log.</span></p> </td> <td style="vertical-align: top;">advec_particles, |
---|
1561 | cpu_log, </td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E</td> <td style="vertical-align: top;">In case of opening unit 80, a |
---|
1562 | barrier |
---|
1563 | is set only for the first call of<span style="font-family: monospace;"> |
---|
1564 | check_open </span>(from routine<span style="font-family: monospace;"> |
---|
1565 | init_particles</span>), in order to avoid the possibility of |
---|
1566 | hanging |
---|
1567 | jobs, |
---|
1568 | which may occur if unit 80 is opened within routine<span style="font-family: monospace;"> |
---|
1569 | allocate_prt_memory</span>.</td> <td style="vertical-align: top;">check_open</td> </tr> |
---|
1570 | <tr> <td style="vertical-align: top;">30/01/04</td> |
---|
1571 | <td style="vertical-align: top;">SR</td> <td style="vertical-align: top;">2.8a</td> <td style="vertical-align: top;">N</td> <td style="vertical-align: top;">In order to prepare the code |
---|
1572 | for |
---|
1573 | the simulation |
---|
1574 | of flow around buildings (to be realized in one of the next major |
---|
1575 | versions), |
---|
1576 | the lower<span style="font-family: monospace;"> k </span>index<span style="font-family: monospace;"> |
---|
1577 | nzb </span>has been replaced by a two-dimensional array<span style="font-family: monospace;"> |
---|
1578 | nzb_2d </span>in many of the three-dimensional loops. So |
---|
1579 | far, all |
---|
1580 | elements of this array are set to<span style="font-family: monospace;"> |
---|
1581 | nzb</span>. <p>This change should not effect simulation |
---|
1582 | results and cpu time |
---|
1583 | in any |
---|
1584 | way.</p> </td> <td style="vertical-align: top;">advec_s_pw, |
---|
1585 | advec_s_up, |
---|
1586 | advec_u_pw, advec_u_up, |
---|
1587 | advec_v_pw, advec_v_up, advec_w_pw, advec_w_up, asselin_filter, |
---|
1588 | buoyancy, |
---|
1589 | calc_liquid_water_content, calc_precipitation, calc_radiation, |
---|
1590 | coriolis, |
---|
1591 | diffusion_e, diffusion_s, diffusion_u, diffusion_v, diffusion_w, |
---|
1592 | diffusivities, |
---|
1593 | impact_of_latent_heat, init_3d_model, modules, production_e, |
---|
1594 | prognostic_equations, </td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C</td> <td style="vertical-align: top;">Euler step informations are |
---|
1595 | removed in |
---|
1596 | the run control output in case of Runge-Kutta schemes. Also, the |
---|
1597 | timestep |
---|
1598 | increment limitation is removed for the Runge-Kutta schemes. <p><span style="font-weight: bold;">Attention:</span> <br> |
---|
1599 | The content of the testresult-file (run control output) has changed |
---|
1600 | due to this modification.</p> </td> <td style="vertical-align: top;">run_control, timestep</td> |
---|
1601 | </tr> <tr> <td style="vertical-align: top;"><br> |
---|
1602 | </td> <td style="vertical-align: top;"><br> </td> |
---|
1603 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E</td> <td style="vertical-align: top;">Velocity gradients at the |
---|
1604 | surface calculated |
---|
1605 | in routine production_e are now limited. In case of inhomogeneous |
---|
1606 | surface |
---|
1607 | heating small diffusivities (<span style="font-family: monospace;">km</span>) |
---|
1608 | sometimes caused very small timesteps due to this problem.</td> <td style="vertical-align: top;">production_e</td> </tr> |
---|
1609 | <tr> <td style="vertical-align: top;">30/04/04<br> |
---|
1610 | </td> <td style="vertical-align: top;">SR<br> |
---|
1611 | </td> <td style="vertical-align: top;">2.8b<br> |
---|
1612 | </td> <td style="vertical-align: top;">N<br> </td> |
---|
1613 | <td style="vertical-align: top;">The number of processors |
---|
1614 | along |
---|
1615 | the respective directions of the virtual processor grid must not be |
---|
1616 | integral divisors of the number of gridpoints along x, y or z any more. |
---|
1617 | In case that they are not integral divisors, the subdomains on the |
---|
1618 | processors at the upper borders of the virtual grid will contain less |
---|
1619 | gridpoints than the other subdomains (which are all of equal size). |
---|
1620 | Although this causes a load imbalance, only runs with very small |
---|
1621 | numbers of processors will feel a significant decrease of performance. |
---|
1622 | In order to be able to carry out the transpositions, array<span style="font-family: monospace;"> d </span>(and also |
---|
1623 | working array<span style="font-family: monospace;"> tend</span>) |
---|
1624 | have the same size on |
---|
1625 | all processors. This new feature is switched on by setting the |
---|
1626 | inipar-parameter<span style="font-family: monospace;"> |
---|
1627 | grid_matching </span>= <span style="font-style: italic;">'match'</span>, |
---|
1628 | which is the |
---|
1629 | default now.<br> <br> |
---|
1630 | Routine<span style="font-family: monospace;"> poisfft </span>is |
---|
1631 | now |
---|
1632 | the |
---|
1633 | default for solving the Poisson-equation for the case of 2d- as well as |
---|
1634 | 1d-domain-decompositions and has been changed from a subroutine to a |
---|
1635 | module. This routine now includes most of the optimization from the |
---|
1636 | (Ketelsen) routine<span style="font-family: monospace;"> |
---|
1637 | poisfft_hybrid </span>and additionally allows 1d-decompositions |
---|
1638 | along y.<br> <span style="font-weight: bold;">ATTENTION:</span> |
---|
1639 | Routine<span style="font-family: monospace;"> |
---|
1640 | poisfft_hybrid </span>might still be |
---|
1641 | faster when running PALM on more than one node of the IBM-Regatta, |
---|
1642 | although the difference is not very big. The <span style="font-family: monospace;">poisfft</span>-code |
---|
1643 | for a |
---|
1644 | decomposition along y has still a poor performance and needs further |
---|
1645 | optimization.<br> <br> |
---|
1646 | The spectra-package is now able to use all the available FFT-methods |
---|
1647 | (selected by inipar-parameter<span style="font-family: monospace;"> |
---|
1648 | fft_method </span>). |
---|
1649 | Performance of the transpositions needed for calculating the spectra |
---|
1650 | has been improved by using new direct transpositions from z to y and |
---|
1651 | from y to x instead of two subsequent transpositions.<br> <br> |
---|
1652 | Runge-Kutta scheme implemented in the 1d-version (<span style="font-family: monospace;">init_1d_model</span>). |
---|
1653 | Diffusion |
---|
1654 | quantity arrays are allocated for previous timelevels only in case of |
---|
1655 | leapfrog scheme.<br> <br> |
---|
1656 | This version is adapted for use on COMPAQ-DECALPHA systems (main |
---|
1657 | changes: calling of SHAPE function within subroutine arguments (e.g.<span style="font-family: monospace;"> singleton</span>) |
---|
1658 | causes compiler errors, particle data type modified for better |
---|
1659 | alignment, DATA statements from modules removed because they caused |
---|
1660 | internal compiler errors).<br> </td> <td style="vertical-align: top;">advec_s_ups, advec_u_ups, |
---|
1661 | advec_v_ups, advec_w_ups, calc_spectra, check_parameters, fft_xy, |
---|
1662 | header, init_1d_model, init_3d_model, init_particles, init_pegrid, |
---|
1663 | modules, parin, plot_2d, poisfft, prandtl_fluxes, pres, read_var_list, |
---|
1664 | singleton, spline_x, spline_y, spline_z, time_integration, transpose, |
---|
1665 | write_3d_binary, write_var_list<br> </td> </tr> <tr> |
---|
1666 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;">FFT routines renamed. Module<span style="font-family: monospace;"> fft_for_1d_decomp </span>renamed<span style="font-family: monospace;"> fft_xy</span>. |
---|
1667 | Subroutine<span style="font-family: monospace;"> leap_frog |
---|
1668 | </span>renamed<span style="font-family: monospace;"> |
---|
1669 | time_integration</span>.<br> <br> |
---|
1670 | For all transpositions, MPI_ALLTOALL is used instead of MPI_ALLTOALLV. |
---|
1671 | The names of many transposition indices have been changed.<br> <br> |
---|
1672 | Inipar-parameter<span style="font-family: monospace;"> |
---|
1673 | impulse_advec </span>renamed<span style="font-family: monospace;"> momentum_advec</span>.<br> |
---|
1674 | <br> |
---|
1675 | Reading of restart data is moved from<span style="font-family: monospace;"> init_3d_model </span>to |
---|
1676 | new routine <span style="font-family: monospace;">read_3d_binary</span>.<br> |
---|
1677 | <br> |
---|
1678 | All former transpose routines collected into one file.<br> </td> |
---|
1679 | <td style="vertical-align: top;">check_parameters, |
---|
1680 | flow_statistics, header, init_1d_model, init_3d_model, init_advec, |
---|
1681 | init_pegrid, palm, parin, poisfft, poisfft_hybrid, production_e, |
---|
1682 | prognostic_equations, read_var_list, sline_x, spline_y, write_var_list<span style="font-weight: bold;"><br> <br> |
---|
1683 | new:</span><br> |
---|
1684 | fft_xy, read_3d_binary, time_integration, transpose<br> <br> |
---|
1685 | <span style="font-weight: bold;">deleted:</span><br> |
---|
1686 | fft_for_1d_decomp, leap_frog, transpose_xy, transpose_xz, transpose_yx, |
---|
1687 | transpose_yz, transpose_zx, transpose_zy<br> </td> </tr> |
---|
1688 | <tr> <td style="vertical-align: top;"><br> </td> |
---|
1689 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">Small errors in the |
---|
1690 | particle-package removed, which sometimes caused aborts of restart runs |
---|
1691 | on IBM.<br> <br> |
---|
1692 | Small error in calculating the time series profiles removed (array |
---|
1693 | bounds of some arrays needed for profil-output had to be increased).<br> |
---|
1694 | <br> |
---|
1695 | Function fft (singleton method) replaced by subroutine fftn due to |
---|
1696 | problems with 64-bit mode on IBM<br> </td> <td style="vertical-align: top;">advec_particles, |
---|
1697 | check_parameters, <br> </td> </tr> <tr> <td style="vertical-align: top;">26/03/05<br> </td> |
---|
1698 | <td style="vertical-align: top;">SR<br> </td> |
---|
1699 | <td style="vertical-align: top;">2.9<br> </td> |
---|
1700 | <td style="vertical-align: top;">N<br> </td> <td style="vertical-align: top;">Non-cyclic lateral boundary |
---|
1701 | conditions implemented.<br> |
---|
1702 | Dirichlet/Neumann conditions at the inflow/outflow can be used either |
---|
1703 | along x or along y. Cyclic conditions have to be used along the |
---|
1704 | remaining direction. In case of non-cyclic conditions along x (y), the |
---|
1705 | upper bound nxl (nyn) of array u (v) is enlarged by one gridpoint on |
---|
1706 | the rightmost (northest) processor. These array index informations are |
---|
1707 | passed to routine<span style="font-family: monospace;"> |
---|
1708 | exchange_horiz </span>and<span style="font-family: monospace;"> |
---|
1709 | disturb_field </span>by two |
---|
1710 | additional arguments. Boundary conditions are set with new |
---|
1711 | inipar-parameters<span style="font-family: monospace;"> |
---|
1712 | bc_lr </span>and<span style="font-family: monospace;"> |
---|
1713 | bc_ns</span>. A damping layer is |
---|
1714 | needed at the outflow in order to damp reflections (see new parameters<span style="font-family: monospace;"> km_damp_max </span>and<span style="font-family: monospace;"> outflow_damping_width</span>) |
---|
1715 | and an |
---|
1716 | additional disturbance is imposed near the inflow (see new parameters<span style="font-family: monospace;"> |
---|
1717 | inflow_disturbance_begin </span>and<span style="font-family: monospace;"> inflow_disturbance_end</span>). |
---|
1718 | Non-cyclic conditions require the use of the multigrid-method for |
---|
1719 | solving the Poisson equation. Argument<span style="font-family: monospace;"> range </span>added |
---|
1720 | to routine<span style="font-family: monospace;"> |
---|
1721 | boundary_conds </span>(where the |
---|
1722 | non-cyclic conditions are set). <br> <br> |
---|
1723 | Minor changes:<br> |
---|
1724 | Output of parameter<span style="font-family: monospace;"> |
---|
1725 | datform </span>on |
---|
1726 | &GLOBAL-Namelist (iso2d). This is set to <span style="font-style: italic;">'big_endian'</span> on |
---|
1727 | IBM- and |
---|
1728 | NEC-machines.<br> <br> |
---|
1729 | Number of particle groups are additionally calculated in<span style="font-family: monospace;"> header </span>(formerly |
---|
1730 | unknown).<br> </td> <td style="vertical-align: top;">advec_u_pw, |
---|
1731 | advec_u_up, advec_v_pw, advec_v_up, boundary_conds, |
---|
1732 | calc_liquid_water_content, check_parameters, close_file, coriolis, |
---|
1733 | diffusion_u, diffusion_v, diffusion_w, diffusivities, disturb_field, |
---|
1734 | exchange_horiz, header, init_3d_model, init_pegrid, init_pt_anomaly, |
---|
1735 | init_rankine, modules, parin, poismg, pres, prognostic_equations, |
---|
1736 | read_var_list, sor, time_integration, timestep, write_var_list<br> |
---|
1737 | </td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;"><span style="font-family: monospace;">pres </span>is called |
---|
1738 | by default only |
---|
1739 | at the last Runge-Kutta-substep, which spares a big amount of CPU-time |
---|
1740 | (see also new parameter<span style="font-family: monospace;"> |
---|
1741 | call_psolver_at_all_substeps</span>). No pressure term in the |
---|
1742 | momentum |
---|
1743 | equations in case of Runge-Kutta-schemes.<br> <span style="font-weight: bold;">Attention:</span> <br> |
---|
1744 | The content of the testresult-file (run control output) has changed |
---|
1745 | due to this modification.<br> <br> |
---|
1746 | Program speedup by removing the exchange of ghost points in routines <span style="font-family: monospace;">calc_liquid_water_content</span>, |
---|
1747 | <span style="font-family: monospace;">diffusivities</span>, |
---|
1748 | .<br> <br> |
---|
1749 | Default value for residual limit increased from 1E-6 to 1E-4. Routine<span style="font-family: monospace;"> prolong </span>in<span style="font-family: monospace;"> poismg </span>simplified |
---|
1750 | (one call of<span style="font-family: monospace;"> |
---|
1751 | exchange_horiz </span>spared).<br> </td> <td style="vertical-align: top;">calc_liquid_water_content, |
---|
1752 | diffusivities, modules, poismg, pres, time_integration, |
---|
1753 | timestep_scheme_steering<br> </td> </tr> <tr> |
---|
1754 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">Calculation of vertical |
---|
1755 | particle |
---|
1756 | velocity (with inertia) corrected, exp_arg had a wrong sign.<br> <br> |
---|
1757 | (e)**1.5 replaced by e*SQRT(e) in init_1d_model because of wrong |
---|
1758 | results on NEC machines (as a side effect, the new calculation is much |
---|
1759 | faster).<br> <br> |
---|
1760 | Two errors concerning switch to PE0 (multigrid method) removed from<span style="font-family: monospace;"> init_pegrid</span>.<br> |
---|
1761 | <br> |
---|
1762 | Two errors in<span style="font-family: monospace;"> |
---|
1763 | plot_2d </span>removed: |
---|
1764 | local_2d is allocated with upper bound<span style="font-family: monospace;"> nzt</span> (former<span style="font-family: monospace;"> nzt+1 </span>was |
---|
1765 | wrong), additional barrier in case that PE0 gathers data from the other |
---|
1766 | PEs, this barrier had to be set at the end of the gathering because |
---|
1767 | otherwise PE0 sometimes received wrong data on tag 0.<br> <br> |
---|
1768 | Use of module indices removed from routine<span style="font-family: monospace;"> split_1dd </span>in<span style="font-family: monospace;"> poisfft </span>since |
---|
1769 | it caused |
---|
1770 | errors in case of<span style="font-family: monospace;"> nx |
---|
1771 | /= ny </span>and |
---|
1772 | a 1D-decomposition along y.<br> <br> |
---|
1773 | Wrong re-definition of dx2 and dy2 in<span style="font-family: monospace;"> sor </span>removed.<br> |
---|
1774 | </td> <td style="vertical-align: top;">advec_particles, |
---|
1775 | init_1d_model, |
---|
1776 | init_pegrid, plot_2d, poisfft, sor<br> </td> </tr> <tr> |
---|
1777 | <td style="vertical-align: top;">23/04/05<br> </td> |
---|
1778 | <td style="vertical-align: top;">SR<br> </td> |
---|
1779 | <td style="vertical-align: top;">2.9a<br> </td> |
---|
1780 | <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;">Additional check for |
---|
1781 | incompatibilities between non-cyclic lateral boundary conditions and |
---|
1782 | other schemes.<br> <br> |
---|
1783 | fcl_factor renamed cfl_factor.<br> <br> |
---|
1784 | New local array sums_ll declared in flow_statistics instead of |
---|
1785 | temporarily using sums_l.<br> <br> |
---|
1786 | crmax (maximum number of crosses allowed in a plot of vertical |
---|
1787 | profiles) increased from 20 to 100.<br> </td> <td style="vertical-align: top;">calc_spectra, check_parameters, |
---|
1788 | flow_statistics, header, modules, parin, timestep<br> </td> |
---|
1789 | </tr> <tr> <td style="vertical-align: top;"><br> |
---|
1790 | </td> <td style="vertical-align: top;"><br> </td> |
---|
1791 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">Revised calculation of output |
---|
1792 | time counters regarding a possible decrease of the output time interval |
---|
1793 | in case of restart runs.<br> <br> |
---|
1794 | Error removed in Dirichlet bottom boundary conditions for pt and q in |
---|
1795 | case of Runge-Kutta schemes.<br> <br> <span style="font-weight: bold;">batch_scp</span> calls |
---|
1796 | (needed |
---|
1797 | for determining correct filenames for AVS-fld-files) is given the |
---|
1798 | remote username as an additional argument.<br> <br> |
---|
1799 | Default setting of outflow_damping_width corrected.<br> <br> |
---|
1800 | Initial horizontal velocities at the lowest grid levels in the 1d-model |
---|
1801 | are set to a very small value in order to avoid wrong results and the |
---|
1802 | resulting too small timesteps.<br> <br> |
---|
1803 | Implicit counters i renamed i9 in modules due to declaration conflicts |
---|
1804 | with i in other subroutines (reported by Portland compiler).<br> </td> |
---|
1805 | <td style="vertical-align: top;">advec_particles, |
---|
1806 | boundary_conds, |
---|
1807 | check_open, check_parameters, init_1d_model, modules, time_integration<br> |
---|
1808 | </td> </tr> <tr> <td style="vertical-align: top;">18/05/05<br> </td> |
---|
1809 | <td style="vertical-align: top;">SR<br> </td> |
---|
1810 | <td style="vertical-align: top;">2.10<br> </td> |
---|
1811 | <td style="vertical-align: top;">N<br> </td> <td style="vertical-align: top;">NetCDF support implemented.<br> |
---|
1812 | Profiles, time series, spectra, cross-sections, 3d-volume-data and |
---|
1813 | particle data can now be output in NetCDF format (file handles |
---|
1814 | 101-108). This output can be switched on with the new d3par-parameter <span style="font-family: monospace;">data_output_format</span>. |
---|
1815 | So far, this support is available on IBM systems at HLRN and on the NEC |
---|
1816 | system at DKRZ. Output in format suitable for graphic software <span style="font-weight: bold;">profil</span>, <span style="font-weight: bold;">iso2d</span> and <span style="font-weight: bold;">avs</span> is still |
---|
1817 | possible.<br> <br> |
---|
1818 | Output of cross sections for qv, vpt and lwp (liquid water path).<br> |
---|
1819 | </td> <td style="vertical-align: top;">advec_particles, |
---|
1820 | check_open, |
---|
1821 | check_parameters, close_file, header, modules, parin, plot_1d, plot_2d, |
---|
1822 | plot_3d, plot_spectra, plot_ts, read_var_list, write_var_list<br> |
---|
1823 | <br> <span style="font-weight: bold;">new:</span><br> |
---|
1824 | netcdf<br> </td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;">In <span style="font-family: monospace;">calc_spectra</span>, n |
---|
1825 | is assigned the |
---|
1826 | number of spectra (formerly, the number of spectra was given by n-1)<br> |
---|
1827 | <br> |
---|
1828 | Abort if <span style="font-family: monospace;">poisfft_hybrid</span> |
---|
1829 | is called in a non-parallel environment.<br> <br> |
---|
1830 | Default values of spectra package parameters <span style="font-family: monospace;">pl_spectra</span> and <span style="font-family: monospace;">spectra_direction</span> |
---|
1831 | changed.<br> </td> <td style="vertical-align: top;">calc_spectra, |
---|
1832 | check_parameters, |
---|
1833 | modules, pres, read_3d_binary, write_3d_binary<br> </td> </tr> |
---|
1834 | <tr> <td style="vertical-align: top;"><br> </td> |
---|
1835 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">Missing argument in ffty |
---|
1836 | (non-parallel case) added.<br> <br> |
---|
1837 | Error in output of particle inertia information removed.<br> </td> |
---|
1838 | <td style="vertical-align: top;">poisfft, header<br> |
---|
1839 | </td> </tr> <tr> <td style="vertical-align: top;">05/07/05<br> </td> |
---|
1840 | <td style="vertical-align: top;">SR<br> </td> |
---|
1841 | <td style="vertical-align: top;">2.11<br> </td> |
---|
1842 | <td style="vertical-align: top;">N/C<br> </td> |
---|
1843 | <td style="vertical-align: top;">New cloud physics code |
---|
1844 | implemented, which explicitly simulates single cloud droplets, |
---|
1845 | including droplet growth by condensation and collision. Using this code |
---|
1846 | requires to set the new inipar-parameter <span style="font-family: monospace;">cloud_droplets</span> |
---|
1847 | = .TRUE. and to use the particle package (by using the <span style="font-weight: bold;">mrun</span>-option <span style="font-family: monospace;">-p particles</span>). |
---|
1848 | Coupling between droplets and the thermodynamic quantities (potential |
---|
1849 | temperature and specific humidity) is regarded in the new subroutine <span style="font-family: monospace;">interaction_droplets_ptq</span>. |
---|
1850 | The real number of droplets in a grid cell can steered by the new |
---|
1851 | inipar-parameter <span style="font-family: monospace;">initial_weighting_factor</span>.<br> |
---|
1852 | <br> <span style="font-weight: bold;">This code |
---|
1853 | will be further extended and probably changed in the near future, so |
---|
1854 | the current status is that of a test version!</span><br> <br> |
---|
1855 | In connection with this new code implementation, several changes has |
---|
1856 | been made to the existing code:<br> <br> |
---|
1857 | The particle (droplet) size is now given as radius (previously |
---|
1858 | diameter). E.g., the name of the respective package parameter <span style="font-family: monospace;">diameter</span> has |
---|
1859 | changed to <span style="font-family: monospace;">radius</span>.<br> |
---|
1860 | <br> |
---|
1861 | The current weighting_factor and radius are stored as additional |
---|
1862 | particle attributes in the type structure <span style="font-family: monospace;">particle_type</span>. |
---|
1863 | The MPI data type <span style="font-family: monospace;">mpi_particle_type</span>, |
---|
1864 | needed for exchanging particles between subdomains, has been changed |
---|
1865 | correspondingly.<br> <br> <span style="font-family: monospace;">gas_constant</span> is |
---|
1866 | renamed <span style="font-family: monospace;">r_d</span>, |
---|
1867 | <span style="font-family: monospace;">latent_heat</span> |
---|
1868 | is renamed <span style="font-family: monospace;">r_v</span>, |
---|
1869 | the allowed string length of <span style="font-family: monospace;">pl2d</span> |
---|
1870 | and <span style="font-family: monospace;">pl3d</span> |
---|
1871 | is increased from 6 to 10.<br> <br> |
---|
1872 | New 3d arrays <span style="font-family: monospace;">ql_1</span>, |
---|
1873 | <span style="font-family: monospace;">ql_2</span>, <span style="font-family: monospace;">ql_v</span> and <span style="font-family: monospace;">ql_vp</span>, <span style="font-family: monospace;">ql</span> is now a |
---|
1874 | pointer, new pointer <span style="font-family: monospace;">ql_c</span>.<br> |
---|
1875 | <br> |
---|
1876 | Data format for unit 85 (particle data output) is changed.</td> <td style="vertical-align: top;">advec_particles.f90 |
---|
1877 | check_open.f90, header.f90, init_3d_model.f90, init_cloud_physics.f90, |
---|
1878 | init_particles.f90, modules.f90, package_parin.f90, parin.f90, |
---|
1879 | plot_2d.f90, plot_3d.f90, read_var_list.f90, time_integration.f90, |
---|
1880 | write_var_list.f90<br> <br> <span style="font-weight: bold;">new:</span><br> |
---|
1881 | interaction_droplets_ptq.f90</td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;">Default value of <span style="font-family: monospace;">call_psolver_at_all_substeps</span> |
---|
1882 | is <span style="font-style: italic;">.TRUE.</span>, |
---|
1883 | because small scale waves occured with <span style="font-style: italic;">.FALSE.</span></td> <td style="vertical-align: top;">modules.f90</td> </tr> |
---|
1884 | <tr> <td style="vertical-align: top;"><br> </td> |
---|
1885 | <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">2d- and 3d-NetCDF-files are not |
---|
1886 | opened if there is no output for them (<span style="font-family: monospace;">pl2d</span> = <span style="font-family: monospace;">pl3d</span> = <span style="font-style: italic;">' '</span>).<br> <br> |
---|
1887 | No opening of units 101 - 108 in case of missing NetCDF support.</td> |
---|
1888 | <td style="vertical-align: top;">check_open.f90, netcdf.f90<br> |
---|
1889 | </td> </tr> <tr> <td style="vertical-align: top;">30/06/05<br> </td> |
---|
1890 | <td style="vertical-align: top;">GS<br> </td> |
---|
1891 | <td style="vertical-align: top;">2.11a<br> </td> |
---|
1892 | <td style="vertical-align: top;">C<br> </td> <td style="vertical-align: top;">Scalars ug and vg have been |
---|
1893 | changed into |
---|
1894 | arrays in order to allow the specification of a geostrophic wind that |
---|
1895 | depends on height (baroclinicity). The initial profiles of the the |
---|
1896 | u- and v-component of the geostrophic wind are initialized by |
---|
1897 | specifying the new initialization parameters <span style="font-family: monospace;">ug_surface</span>, <span style="font-family: monospace;">ug_vertical_gradient</span>, |
---|
1898 | <span style="font-family: monospace;">ug_vertical_gradient_level</span> |
---|
1899 | and <span style="font-family: monospace;">vg_surface</span>, |
---|
1900 | <span style="font-family: monospace;">vg_vertical_gradient</span>, |
---|
1901 | <span style="font-family: monospace;">vg_vertical_gradient_level</span>, |
---|
1902 | respectively. <br> <br> |
---|
1903 | The former initialization parameters <span style="font-family: monospace;">ug</span> and <span style="font-family: monospace;">vg</span> have been |
---|
1904 | removed. <br> </td> <td style="vertical-align: top;">boundary_conds, |
---|
1905 | check_parameters, coriolis, header, init_1d_model, modules, parin, |
---|
1906 | prognostic_equations, read_var_list, spline_z, write_var_list<br> |
---|
1907 | </td> </tr> <tr> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;"><br> </td> <td style="vertical-align: top;">E<br> </td> <td style="vertical-align: top;">Error in the calculation of u_0 |
---|
1908 | and |
---|
1909 | v_0 in production_e.f90 removed.<br> <br> <span style="font-weight: bold;">Attention:</span> <br> |
---|
1910 | The content of the testresult-file (run control output) has changed |
---|
1911 | due to this modification.<br> </td> <td style="vertical-align: top;">production_e<br> </td> |
---|
1912 | </tr> <tr> <td style="text-align: left; vertical-align: top;">20/10/05</td> |
---|
1913 | <td style="vertical-align: top;">SR</td> <td style="vertical-align: top;">2.11b</td> <td style="vertical-align: top;">N/C</td> <td style="vertical-align: top;">Collision process for droplet |
---|
1914 | growth completed.<br> <br> <span style="font-weight: bold;">The droplet code is still under |
---|
1915 | development and requires further speed optimization!<br> <br> |
---|
1916 | </span>Number of particles really used is additionally output on |
---|
1917 | the netcdf particle data file.<span style="font-weight: bold;"></span></td> |
---|
1918 | <td style="vertical-align: top;">advec_particles, modules, |
---|
1919 | netcdf</td> </tr> <tr> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;">E</td> <td style="vertical-align: top;">The |
---|
1920 | last PE in a row is not allowed to have more grid points than the other |
---|
1921 | PES (only less). Jobs crashed in these cases that the last PE has more |
---|
1922 | grid points. Therefore, the number of gridpoints along x (and y) must |
---|
1923 | now meet a special condition which is checked in case that <span style="font-family: monospace;">grid_matching</span> = |
---|
1924 | <span style="font-style: italic;">'match'</span> is |
---|
1925 | used.<br> <br> |
---|
1926 | Error removed in calculating y axis data for yz cross sections. Error |
---|
1927 | in output of netcdf yz-cross-sections removed.<br> <br> |
---|
1928 | 2*r replaced by r in the exponential term of the particle momentum |
---|
1929 | equation.<br> |
---|
1930 | Error in output of yz-slice information removed.</td> <td style="vertical-align: top;">advec_particles, header, |
---|
1931 | init_pegrid, netcdf, plot_2d</td> </tr> <tr> <td style="vertical-align: top;">06/12/05</td> <td style="vertical-align: top;">SR</td> <td style="vertical-align: top;">2.11c</td> <td style="vertical-align: top;">N</td> <td style="vertical-align: top;">Output of ql profile is allowed |
---|
1932 | in case of using cloud droplets.</td> <td style="vertical-align: top;">check_parameters, |
---|
1933 | flow_statistics, modules</td> </tr> <tr> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;"> </td> <td style="vertical-align: top;">E</td> <td style="vertical-align: top;">The horizontally averaged pt |
---|
1934 | profile is calculated within<span style="font-family: monospace;"> |
---|
1935 | buoyancy </span>only |
---|
1936 | in case of the first respective intermediate timestep. This is done in |
---|
1937 | order to spare communication time and to produce identical model |
---|
1938 | results with jobs which are calling<span style="font-family: monospace;"> flow_statistics </span>at |
---|
1939 | different time intervals.<br> <br> |
---|
1940 | Error in netcdf variable declaration for<span style="font-family: monospace;"> statistic_regions </span>/= |
---|
1941 | <span style="font-style: italic;">0</span> removed.</td> |
---|
1942 | <td style="vertical-align: top;">buoyancy, netcdf</td> |
---|
1943 | </tr><tr><td style="vertical-align: top;">23/02/06</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.0</td><td style="vertical-align: top;">N</td><td><span style="font-weight: bold;">Version for simulating flows over |
---|
1944 | topography (buildings, mountains, etc.)</span><br style="font-weight: bold;"><br>Besides |
---|
1945 | the implementation of topography, this version contains several other |
---|
1946 | improvements. The most important ones are listed here:<br><ul><li>The |
---|
1947 | cloud droplet code has been optimized (it now runs about 100 times |
---|
1948 | faster than before).</li><li>Output of time-averaged 2d/3d |
---|
1949 | data (sections / volume data) is possible.</li><li>Output |
---|
1950 | of 2d-section data averaged along the direction normal to this section |
---|
1951 | can be done.</li><li>The user-interface has been extended |
---|
1952 | in order to allow 2d-/3d-output of user-defined quantities.</li></ul>The |
---|
1953 | kind of topography to be used is controlled by the new initialization |
---|
1954 | parameter <span style="font-family: monospace;">topography</span>. |
---|
1955 | Allowed values are <span style="font-style: italic;">'flat'</span>, |
---|
1956 | <span style="font-style: italic;">'single_building'</span>, |
---|
1957 | and <span style="font-style: italic;">'read_from_file'</span>. |
---|
1958 | The user can define his own special topography setting within the new |
---|
1959 | user-interface routine <span style="font-family: monospace;">user_init_grid</span>. |
---|
1960 | For the single building case, the building (rectangular) size |
---|
1961 | and position can be controlled with parameters <span style="font-family: monospace;">building_height</span>, |
---|
1962 | <span style="font-family: monospace;">building_length_x</span>, |
---|
1963 | <span style="font-family: monospace;">building_length_y</span>, |
---|
1964 | <span style="font-family: monospace;">building_wall_left</span>, |
---|
1965 | and <span style="font-family: monospace;">building_wall_south</span>.<br> |
---|
1966 | <br> |
---|
1967 | The topography code is already optimized (vectorized) for use on the |
---|
1968 | NEC-SX6.<br><br>Output of time-averaged 2d-/3d-data can be |
---|
1969 | enabled by appending the string <span style="font-style: italic;">'_av'</span> |
---|
1970 | to the respective output quantities given with the new |
---|
1971 | runtime-parameter <span style="font-family: monospace;">data_output</span> |
---|
1972 | (see further below for the (name)changes in the parameters for data |
---|
1973 | output). Example: if a time-average of the vertical cross-section of |
---|
1974 | potential temperature is required, the user has to set <span style="font-family: monospace;">data_output</span> = <span style="font-style: italic;">'pt_xy_av'</span>. |
---|
1975 | In case of NetCDF-output, the time-averaged data is output to |
---|
1976 | additional files (seperate from the non-averaged output). The length of |
---|
1977 | the averaging interval and the temporal distance of the single |
---|
1978 | instantaneous sections (volumes) entering into this averaging is |
---|
1979 | controlled by the new runtime-parameters <span style="font-family: monospace;">averaging_interval</span>and |
---|
1980 | <span style="font-family: monospace;">dt_averaging_input</span>. |
---|
1981 | <br><br>An average normal to the direction of a |
---|
1982 | cross-section can be output by setting the respective cross section |
---|
1983 | index to <span style="font-style: italic;">-1</span> |
---|
1984 | (example: <span style="font-family: monospace;">section_xz</span> |
---|
1985 | = <span style="font-style: italic;">-1</span>).<br><br>New |
---|
1986 | user-interface routines allowing the output of user-defined quantities |
---|
1987 | are <span style="font-family: monospace;">user_check_data_output</span>, |
---|
1988 | <span style="font-family: monospace;">user_define_netcdf_grid</span>, |
---|
1989 | <span style="font-family: monospace;">user_data_output_2d</span>, |
---|
1990 | <span style="font-family: monospace;">user_data_output_3d</span>, |
---|
1991 | and <span style="font-family: monospace;">user_3d_data_averaging</span>. |
---|
1992 | These quantities can be calculated using the new <span style="font-family: monospace;">CASE</span>-Entry <span style="font-style: italic;">'after integration'</span> |
---|
1993 | in the user-interface routine <span style="font-family: monospace;">user_actions</span>.<br><br>Optimization |
---|
1994 | of the cloud droplet code is mainly done by re-sorting all particles |
---|
1995 | after every timestep in a way that now all particles which belong to |
---|
1996 | the same grid-box (k,j,i) are stored consecutively (wthout any strides) |
---|
1997 | in memory.<br> <br> |
---|
1998 | Code adaptation for the IBM at the department of atmospheric sciences, |
---|
1999 | Yonsei university (ibmy). Affected subroutines: <span style="font-family: monospace;">fft_xy</span>, <span style="font-family: monospace;">netcdf</span>, <br><br><span style="font-weight: bold;">Further new features:</span><br><ul><li>Use |
---|
2000 | of particle tails now requires setting of the new package-parameter <span style="font-family: monospace;">use_particle_tails</span>. |
---|
2001 | The new parameter skip_particles_for_tail allows only every <span style="font-family: monospace;">skip_particle_for_tail</span>'th |
---|
2002 | parameter having a tail.</li><li>Initialization-parameter <span style="font-family: monospace;">e_min</span> can be |
---|
2003 | used to set a lower limit for the subgrid-scale TKE (i.e. to guarantee |
---|
2004 | a lower limit for the flow's Reynolds-number).</li><li>A |
---|
2005 | conservation of the volume flow (through the complete xz- and |
---|
2006 | yz-sections of the total domain) can be enforced by the new |
---|
2007 | initialization-parameter <span style="font-family: monospace;">conserve_volume_flow</span>.</li><li>Data |
---|
2008 | output can be skipped for a given time interval from simulation start |
---|
2009 | (t=0) using new runtime-parameters <span style="font-family: monospace;">skip_time_dopr</span>, |
---|
2010 | <span style="font-family: monospace;">skip_time_dosp</span>, |
---|
2011 | <span style="font-family: monospace;">skip_time_do2d_xy</span>, |
---|
2012 | <span style="font-family: monospace;">skip_time_do2d_xz</span>, |
---|
2013 | <span style="font-family: monospace;">skip_time_do2d_yz</span>, |
---|
2014 | and <span style="font-family: monospace;">skip_time_do3d</span>.<br> |
---|
2015 | </li><li>By default, NetCDF output is now using 64-bit |
---|
2016 | offset format |
---|
2017 | (large file support) on most machines. The user can switch to the |
---|
2018 | 32-bit offset format with the new runtime-parameter <span style="font-family: monospace;">netcdf_64bit</span>. |
---|
2019 | Units 111:113 and 116 are opened for NetCDF output of |
---|
2020 | time-averaged 2d-3d data.<br> </li> <li>Data |
---|
2021 | logging routines are added (see file data_log.f90), which can be used |
---|
2022 | for debugging purposes. Output is done on unit 20 (local file |
---|
2023 | name/directory name DATA_LOG).</li> <li>New routine <span style="font-family: monospace;">exchange_horiz_2d_int</span> |
---|
2024 | for ghostpoint exchange of 2d-integer arrays. Routine <span style="font-family: monospace;">exchange_horiz_2d</span> |
---|
2025 | is extended for non-cyclic boundary conditions in the non-parallel case.</li> |
---|
2026 | <li>Two different methods for calculating the mixing length and |
---|
2027 | the dissipation can be used in the 1d-model. These are steered by the |
---|
2028 | new initializing-parameters <span style="font-family: monospace;">dissipation_1d</span> |
---|
2029 | and <span style="font-family: monospace;">mixing_length_1d</span>.<br> |
---|
2030 | </li> |
---|
2031 | </ul></td><td style="vertical-align: top;">advec_particles, |
---|
2032 | advec_s_pw, |
---|
2033 | advec_s_up, advec_u_pw, advec_u_up, advec_v_pw, advec_v_up, advec_w_pw, |
---|
2034 | advec_w_up, boundary_conds, buoyancy, check_open, check_parameters, |
---|
2035 | close_file, coriolis, diffusion_e, diffusion_s, diffusion_u, |
---|
2036 | diffusion_v, diffusion_w, diffusivities, disturb_field, |
---|
2037 | disturb_heatflux, exchange_horiz_2d, exchange_horiz, flow_statistics, |
---|
2038 | header, init_1d_model, init_3d_model, init_grid, init_particles, |
---|
2039 | init_pegrid, modules, netcdf, package_parin, parin, poisfft, |
---|
2040 | prandtl_fluxes, pres, production_e, prognostic_equations, |
---|
2041 | read_3d_binary, read_var_list, run_control, time_integration, |
---|
2042 | user_interface, write_3d_binary, write_var_list<br> <br> <span style="font-weight: bold;">new:</span><br> |
---|
2043 | average_3d_data, data_log, sum_up_3d_data<br> <br> <span style="font-weight: bold;">renamed:<br> </span>plot_dvrp |
---|
2044 | -> data_output_dvrp<br> |
---|
2045 | plot_spectra -> data_output_spectra<br> |
---|
2046 | plot_ts -> data_output_tseries<br> |
---|
2047 | plot_1d -> data_output_profiles<br> <span style="font-weight: bold;"></span>plot_2d -> |
---|
2048 | data_output_2d<br> |
---|
2049 | plot_3d -> data_output_3d<br> |
---|
2050 | </td></tr><tr><td style="vertical-align: top;"> </td><td> </td><td> </td><td style="vertical-align: top;">C</td><td>In |
---|
2051 | parallel mode, all PEs are opening the same copy of the |
---|
2052 | NAMELIST-parameter file <span style="font-family: monospace;">PARIN</span>, |
---|
2053 | i.e. from now on, the file attribute "<span style="font-family: monospace;">npe</span>" must be |
---|
2054 | removed from the corresponding file connection statements in the <span style="font-weight: bold;">mrun</span> configuration |
---|
2055 | file (.mrun.config).<br><br>A |
---|
2056 | large number of parameter names and local filenames have been changed |
---|
2057 | (see list below). Most of them are parameters concerning data |
---|
2058 | output (do). The former denotations "plot" and "pl" have been changed |
---|
2059 | to "data_output" and "do", respectively. In addition to these changes, |
---|
2060 | the names of many internal PALM parameters and variables have also |
---|
2061 | changed.<br><br>Restart runs now require setting of the |
---|
2062 | initialization-parameter <span style="font-family: monospace;">initializing_actions</span> |
---|
2063 | = <span style="font-style: italic;">'read_restart_data'</span>.<br> |
---|
2064 | <br> |
---|
2065 | Concerning particles, the parameters <span style="font-family: monospace;">psl</span>, <span style="font-family: monospace;">psr</span>, <span style="font-family: monospace;">pdx</span>, |
---|
2066 | etc., which are controlling the position of the particle source and the |
---|
2067 | number of particles within this source, are now 1d-arrays. This allows |
---|
2068 | to define different particle sources for different particle groups.<br> |
---|
2069 | <br> |
---|
2070 | The number of particle groups has to be set by the user (no automatic |
---|
2071 | calculation from the value of parameter <span style="font-family: monospace;">density_ratio</span> |
---|
2072 | any more)<span style="font-style: italic;"></span>. |
---|
2073 | Variable <span style="font-family: monospace;">idum</span> |
---|
2074 | in type <span style="font-family: monospace;">particle_type</span> |
---|
2075 | has been renamed <span style="font-family: monospace;">tail_id</span>.<br><br>Output |
---|
2076 | for units 15 and 17 flushed in <span style="font-family: monospace;">init_1d_model</span>.<br><br>List |
---|
2077 | of changed parameter names:<br><table style="text-align: left; width: 559px; height: 831px;" border="1" cellpadding="2" cellspacing="2"><tbody><tr><td style="font-weight: bold;" align="undefined" valign="undefined">Old name</td><td align="undefined" valign="undefined"><span style="font-weight: bold;">New name</span></td><td align="undefined" valign="undefined"><span style="font-weight: bold;">Comments</span></td></tr><tr><td align="undefined" valign="undefined">average_period_pl1d</td><td align="undefined" valign="undefined">averaging_interval_pr</td><td align="undefined" valign="undefined"><br> |
---|
2078 | </td></tr><tr><td style="vertical-align: top;">average_period_pr1d</td><td style="vertical-align: top;">---</td><td style="vertical-align: top;">averaging of printed profiles |
---|
2079 | is not possible any more</td></tr><tr><td align="undefined" valign="undefined">average_period_sp</td><td align="undefined" valign="undefined">averaging_interval_sp</td><td align="undefined" valign="undefined"><br> |
---|
2080 | </td></tr><tr><td align="undefined" valign="undefined">dt_average</td><td align="undefined" valign="undefined">dt_averaging_input_pr</td><td align="undefined" valign="undefined"><br> |
---|
2081 | </td></tr><tr><td align="undefined" valign="undefined">dt_pl1d</td><td align="undefined" valign="undefined">dt_dopr</td><td align="undefined" valign="undefined"><br> |
---|
2082 | </td></tr><tr><td align="undefined" valign="undefined">dt_plsp</td><td align="undefined" valign="undefined">dt_dosp</td><td align="undefined" valign="undefined"><br> |
---|
2083 | </td></tr><tr><td>dt_plts</td><td>dt_dots</td><td></td></tr><tr><td align="undefined" valign="undefined">dt_pr1d</td><td align="undefined" valign="undefined">dt_dopr_listing</td><td align="undefined" valign="undefined"><br> |
---|
2084 | </td></tr><tr><td align="undefined" valign="undefined">dt_pl2d_xy</td><td align="undefined" valign="undefined">dt_do2d_xy</td><td align="undefined" valign="undefined"><br> |
---|
2085 | </td></tr><tr><td align="undefined" valign="undefined">dt_pl2d_xz</td><td align="undefined" valign="undefined">dt_do2d_xz</td><td align="undefined" valign="undefined"><br> |
---|
2086 | </td></tr><tr><td align="undefined" valign="undefined">dt_pl2d_yz</td><td align="undefined" valign="undefined">dt_do2d_yz</td><td align="undefined" valign="undefined"><br> |
---|
2087 | </td></tr><tr><td align="undefined" valign="undefined">ebene_xy</td><td align="undefined" valign="undefined">section_xy</td><td align="undefined" valign="undefined"><br> |
---|
2088 | </td></tr><tr><td align="undefined" valign="undefined">ebene_xz</td><td align="undefined" valign="undefined">section_xz</td><td align="undefined" valign="undefined"><br> |
---|
2089 | </td></tr><tr><td align="undefined" valign="undefined">ebene_yz</td><td align="undefined" valign="undefined">section_yz</td><td align="undefined" valign="undefined"><br> |
---|
2090 | </td></tr><tr><td align="undefined" valign="undefined">nz_plot3d</td><td align="undefined" valign="undefined">nz_do3d</td><td align="undefined" valign="undefined"><br> |
---|
2091 | </td></tr><tr><td align="undefined" valign="undefined">plts</td><td align="undefined" valign="undefined">data_output_ts</td><td align="undefined" valign="undefined"><br> |
---|
2092 | </td></tr><tr><td align="undefined" valign="undefined">pl1d</td><td align="undefined" valign="undefined">data_output_pr</td><td align="undefined" valign="undefined"><br> |
---|
2093 | </td></tr><tr><td style="vertical-align: top;">pl2d</td><td style="vertical-align: top;">data_output</td><td style="vertical-align: top;">old parameters pl2d and pl3d |
---|
2094 | are joined to new parameter data_output</td></tr><tr><td align="undefined" valign="undefined">pl3d</td><td align="undefined" valign="undefined">data_output</td><td align="undefined" valign="undefined"><br> |
---|
2095 | </td></tr><tr><td align="undefined" valign="undefined">pl2d_at_begin</td><td align="undefined" valign="undefined">do2d_at_begin</td><td align="undefined" valign="undefined"><br> |
---|
2096 | </td></tr><tr><td align="undefined" valign="undefined">pl3d_at_begin</td><td align="undefined" valign="undefined">do3d_at_begin</td><td align="undefined" valign="undefined"><br> |
---|
2097 | </td></tr><tr><td align="undefined" valign="undefined">pl3d_compress</td><td align="undefined" valign="undefined">do3d_compress</td><td align="undefined" valign="undefined"><br> |
---|
2098 | </td></tr><tr><td align="undefined" valign="undefined">pl3d_precision</td><td align="undefined" valign="undefined">do3d_comp_prec</td><td align="undefined" valign="undefined"><br> |
---|
2099 | </td></tr><tr><td>pl_spectra</td><td>data_output_sp</td><td></td></tr><tr><td align="undefined" valign="undefined">read_fields_from_prior_run</td><td align="undefined" valign="undefined">read_restart_data</td><td align="undefined" valign="undefined"><br> |
---|
2100 | </td></tr><tr><td align="undefined" valign="undefined">write_plot2d_on_each_pe</td><td align="undefined" valign="undefined">data_output_2d_on_each_pe</td><td align="undefined" valign="undefined"><br> |
---|
2101 | </td></tr><tr><td align="undefined" valign="undefined">z_max_pl1d</td><td align="undefined" valign="undefined">z_max_do1d</td><td align="undefined" valign="undefined"><br> |
---|
2102 | </td></tr><tr><td align="undefined" valign="undefined">z_max_pl2d</td><td align="undefined" valign="undefined">z_max_do2d</td><td align="undefined" valign="undefined"><br> |
---|
2103 | </td></tr></tbody></table></td><td style="vertical-align: top;">advec_particles, |
---|
2104 | advec_s_bc, check_parameters, check_open, close_file, |
---|
2105 | data_output_dvrp, data_output_profiles, data_output_tseries, |
---|
2106 | data_output_2d, data_output_3d, flow_statistics, header, init_1d_model, |
---|
2107 | init_3d_model, init_dvrp, init_particles, init_pegrid, init_slope, |
---|
2108 | modules, netcdf, package_parin, palm, parin, print_1d, read_var_list, |
---|
2109 | run_control, time_integration, timestep, write_compressed, |
---|
2110 | write_var_list<br> |
---|
2111 | </td></tr><tr><td> </td><td> </td><td> </td><td style="vertical-align: top;">E</td><td>Error in |
---|
2112 | the particle release (defaults of <span style="font-family: monospace;">psl</span>, <span style="font-family: monospace;">psr</span>, <span style="font-family: monospace;">psn</span>, <span style="font-family: monospace;">pss</span>) at the PE |
---|
2113 | boundary has been fixed.<br> <br> |
---|
2114 | Error removed getting the variable ids for <span style="font-family: monospace;">_ext</span> for |
---|
2115 | profiles and time series.<br><br>NetCDF calls in <span style="font-family: monospace;">data_output_tseries</span> |
---|
2116 | only if NetCDF output is switched on.<br><br>Output of the |
---|
2117 | initial geostrophic wind profile corrected.<br><br>Maximum |
---|
2118 | possibel timestep for Runge-Kutta-schemes reduced, error concerning |
---|
2119 | initialization of <span style="font-family: monospace;">l_black</span> |
---|
2120 | removed (both in <span style="font-family: monospace;">init_1d_model</span>).<br> |
---|
2121 | </td><td style="vertical-align: top;">advec_particles, |
---|
2122 | data_output_tseries, header, init_particles, init_1d_model, netcdf<br> |
---|
2123 | </td></tr><tr><td align="left" valign="top">26/04/06</td><td align="left" valign="top">SR</td><td align="left" valign="top">3.0a</td><td align="left" valign="top">N</td><td align="left" valign="top">OpenMP parallelization for |
---|
2124 | the cache-optimized PALM code.<br><br>OpenMP |
---|
2125 | directives have been added where necessary. Still further tuning will |
---|
2126 | be necessary to get optimum performance. Other parts of the code than |
---|
2127 | the cache-optimized code still need to be (OpenMP-) parallelized. <br><br>So |
---|
2128 | far, threads are activated by setting the <span style="font-weight: bold;">mrun</span>-options <span style="font-family: monospace;">-T</span> <span style="font-style: italic;"><number_of_threads></span> |
---|
2129 | and <span style="font-family: monospace;">-O</span>, |
---|
2130 | i.e. when the Option <span style="font-family: monospace;">-O</span> |
---|
2131 | is given, the <span style="font-family: monospace;">-T</span> |
---|
2132 | argument is interpreted as the number of threads to be used. When <span style="font-family: monospace;">-O</span> is given, |
---|
2133 | the number of MPI tasks per node is automatically set to <span style="font-style: italic;">1</span>.<br><br>Beside |
---|
2134 | the additional compiler directives, the main code change required by |
---|
2135 | the OpenMP parallelization is that global sums are now calculated by |
---|
2136 | first calculating local sums on each thread. As the next step, local |
---|
2137 | sums are calculated from these thread sums for each MPI task before the |
---|
2138 | global sum is computed via MPI_ALLREDUCE. For storing the |
---|
2139 | thread |
---|
2140 | sums, arrays sums_l and sums_l_l now have three dimensions where the |
---|
2141 | number of elements of the third dimension is equal to the number of |
---|
2142 | OpenMP threads.</td><td align="left" valign="top">buoyancy, |
---|
2143 | cpu_statistics, diffusivities, flow_statistics, header, init_pegrid, |
---|
2144 | init_3d_model, modules, prandtl_fluxes, pres, production_e</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top">ML</td><td align="left" valign="top"> </td><td align="left" valign="top">C</td><td align="left" valign="top">Provisional |
---|
2145 | correction for Piacsek & Williams advection scheme: keep u and |
---|
2146 | v |
---|
2147 | zero one layer below the topography (in case of set_1d-model_profiles).</td><td align="left" valign="top">init_3d_model</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top">SR/ML</td><td align="left" valign="top"> </td><td align="left" valign="top">E</td><td align="left" valign="top">In <span style="font-family: monospace;">flow_statistics.f90</span> |
---|
2148 | nzb_s_inner(j,i) replaced by nzb in determination of z_i.<br><br>Errors |
---|
2149 | removed in the computation of the diabatic mixing length (<span style="font-family: monospace;">init_1d_model.f90</span>).<br><br>Error |
---|
2150 | removed in extend mode when checking whether the selected cross |
---|
2151 | sections match those in the already existing NetCDF file (<span style="font-family: monospace;">netcdf.f90</span>).</td><td align="left" valign="top">flow_statistics, |
---|
2152 | init_1d_model, netcdf</td></tr><tr><td align="left" valign="top">02/06/06</td><td align="left" valign="top">SR</td><td align="left" valign="top">3.0b</td><td align="left" valign="top">N</td><td align="left" valign="top">This version is adapted to the Sun Fire X4600 |
---|
2153 | system at TIT (to be used by setting the <span style="font-weight: bold;">mrun</span> option <span style="font-family: monospace;">-h lctit</span>).</td><td align="left" valign="top">cpu_log, init_1d_model, |
---|
2154 | local_tremain, locaö_tremain_ini, run_control</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top">C</td><td align="left" valign="top">NetCDF 2d- |
---|
2155 | and 3d-datasets now contain the exact coordinates of the variables |
---|
2156 | along x and y with respect to the positions where they are defined on |
---|
2157 | the staggered grid.<br><br>NetCDF datasets of cross |
---|
2158 | sections (e.g. <span style="font-family: monospace;">DATA_2D_XY_NETCDF</span>) |
---|
2159 | are only opened if the respective cross sections are really requested |
---|
2160 | by the settings of parameter <span style="font-family: monospace;">data_output</span>.</td><td align="left" valign="top">check_parameters, |
---|
2161 | data_output_2d, data_output_3d, modules, netcdf, user_interface</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top">E</td><td align="left" valign="top">p is assigned to <span style="font-family: monospace;">to_be_resorted</span> |
---|
2162 | instead of w</td><td align="left" valign="top">data_output_2d</td></tr><tr><td align="left" valign="top">04/08/06</td><td align="left" valign="top">SR</td><td align="left" valign="top">3.1</td><td align="left" valign="top">N</td><td align="left" valign="top">Subgrid |
---|
2163 | scale velocities can (optionally) be included for calculating the |
---|
2164 | particle advection, using the method of Weil et al. (2004, JAS, 61, |
---|
2165 | 2877-2887). This method is switched on by the new particle package |
---|
2166 | parameter <span style="font-family: monospace;">use_sgs_for_particles</span>. |
---|
2167 | This also forces the Euler/upstream method to be used for time |
---|
2168 | advancement of the TKE (see new parameter <span style="font-family: monospace;">use_upstream_for_tke</span>). |
---|
2169 | The minimum timestep during the sub-timesteps is controlled by |
---|
2170 | parameter <span style="font-family: monospace;">dt_min_part</span>. |
---|
2171 | The data type <span style="font-family: monospace;">particle_type</span> |
---|
2172 | has additional new attributes <span style="font-family: monospace;">e_m</span>, |
---|
2173 | <span style="font-family: monospace;">dt_sum</span>, |
---|
2174 | and <span style="font-family: monospace;">speed_x/y/z_sgs</span>.<br><br>Other |
---|
2175 | new particle features: output of particle quantities as timeseries in |
---|
2176 | NetCDF format (on local file <span style="font-family: monospace;">DATA_1D_PTS_NETCDF</span>). |
---|
2177 | The output time interval is controlled by parameter <span style="font-family: monospace;">dt_dopts</span>. |
---|
2178 | Particle advection can be switched off after some time using parameter <span style="font-family: monospace;">end_time_prel</span>. |
---|
2179 | More than one particle per point can be started with parameter <span style="font-family: monospace;">particles_per_point</span>.<br><br>Additional |
---|
2180 | parameter in function <span style="font-family: monospace;">random_gauss</span> |
---|
2181 | which limits the range of the created random numbers to five times the |
---|
2182 | standard deviation (=1). Seeds <span style="font-family: monospace;">iran</span> |
---|
2183 | and <span style="font-family: monospace;">iran_part</span> |
---|
2184 | are stored for restart runs.</td><td align="left" valign="top">advec_particles, |
---|
2185 | check_open, check_parameters, close_file, diffusion_e, |
---|
2186 | disturb_heatflux, header, init_3d_model, init_particles, modules, |
---|
2187 | netcdf, package_parin, parin, prognostic_equations, random_gauss, |
---|
2188 | read_3d_binary, read_var_list, time_integration, write_3d_binary, |
---|
2189 | write_var_list<br><br><span style="font-weight: bold;">new:</span><br>data_output_ptseries</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top">C</td><td align="left" valign="top">Call of subroutine <span style="font-family: monospace;">header</span> is moved |
---|
2190 | after call of subroutine <span style="font-family: monospace;">init_3d_model</span>. |
---|
2191 | Generation of <span style="font-family: monospace;">run_description_header</span> |
---|
2192 | is moved from routines <span style="font-family: monospace;">palm</span> |
---|
2193 | and <span style="font-family: monospace;">header</span> |
---|
2194 | to <span style="font-family: monospace;">check_parameters</span>. |
---|
2195 | Determination of the number of particle groups is moved from <span style="font-family: monospace;">header</span> to <span style="font-family: monospace;">init_particles</span>.<br><br><span style="font-family: monospace;">izuf</span> renamed <span style="font-family: monospace;">iran</span>.</td><td align="left" valign="top">check_parameters, |
---|
2196 | disturb_field, disturb_heatflux, header, init_particles, modules, palm</td></tr><tr><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top"> </td><td align="left" valign="top">E</td><td align="left" valign="top">Variables |
---|
2197 | do2d_unit and do3d_unit now defined as 2d-arrays. Before, in some |
---|
2198 | cases, the units of variables in the 2d- and 3d-NetCDF-files have been |
---|
2199 | wrong.<br><br>In routine <span style="font-family: monospace;">poisfft</span> default |
---|
2200 | setting of the thread number tn in case of not using OpenMP.<br><br>Error |
---|
2201 | removed in the non-parallel part of routine <span style="font-family: monospace;">flow_statistics</span> |
---|
2202 | (number of arguments of array <span style="font-family: monospace;">sums_l</span>).<br><br>Error |
---|
2203 | removed which appeared if the user had decreased the value of <span style="font-family: monospace;">dt_dopr</span> within |
---|
2204 | a job chain and if simulataneous time averaging of profiles was |
---|
2205 | switched on.</td><td align="left" valign="top">check_parameters, |
---|
2206 | data_output_profiles, flow_statistics, modules, netcdf, poisfft</td></tr><tr><td style="vertical-align: top;">22/08/06</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.1a</td><td style="vertical-align: top;">N</td><td style="vertical-align: top;">In case of more than one |
---|
2207 | particle group, seperate output of timeseries for each of the groups.<br><br>New |
---|
2208 | initial parameter <span style="font-family: monospace;">dz_max</span>, |
---|
2209 | which limits the vertical gridspacing in case of a vertically stretched |
---|
2210 | grid.</td><td style="vertical-align: top;">data_output_ptseries, |
---|
2211 | header, init_grid, modules, netcdf, parin, read_var_list, write_var_list</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">Disturbances are imposed only |
---|
2212 | for the last Runge-Kutta-substep. <br><span style="font-weight: bold;">Attention:</span> <br> |
---|
2213 | The content of the testresult-file (run control output) has changed |
---|
2214 | due to this modification.<br><br>Output of xz and yz cross |
---|
2215 | sections now up to gridpoint nzt+1.<br><br>Default settings |
---|
2216 | of particle start positions changed.</td><td style="vertical-align: top;">check_open, close_file, |
---|
2217 | data_output_2d, init_particles, netcdf, time_integration</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Initialisation of all tendency |
---|
2218 | arrays (t.._m) needed for the Runge-Kutta schemes.<br><br>Bugfix |
---|
2219 | in index array initialization for line- or point-like topography |
---|
2220 | structures.<br><br>Bugfix: yv coordinates are now used for |
---|
2221 | yz cross sections, where neccessary.</td><td style="vertical-align: top;">init_3d_model, init_grid, netcdf</td></tr><tr><td style="vertical-align: top;">12/02/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.1b</td><td style="vertical-align: top;"> N</td><td style="vertical-align: top;"><span style="font-weight: bold;">Attention:</span><br>This |
---|
2222 | is the last revision before switching to the subversion revison control |
---|
2223 | system!<br><br>Informative output to the job protocoll in |
---|
2224 | case of restarts.</td><td style="vertical-align: top;">check_for_restart</td></tr><tr><td> </td><td> </td><td> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">Values of environment variables |
---|
2225 | are now read from local file <span style="font-family: monospace;">ENVPAR</span> |
---|
2226 | instead of getting them by a system call.<br><br>For |
---|
2227 | interpolation in <span style="font-family: monospace;">advec_particles</span>, |
---|
2228 | allways level k is used.</td><td style="vertical-align: top;">advec_particles, |
---|
2229 | local_tremain_ini, parin</td></tr><tr><td> </td><td> </td><td> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Several bugfixes in <span style="font-family: monospace;">advec_particles</span>: |
---|
2230 | new particles are released only if <span style="font-family: monospace;">end_time_prel</span> |
---|
2231 | > <span style="font-family: monospace;">simulated_time</span>, transfer |
---|
2232 | of particles when x < -0.5*dx (0.0 before), etc., index i,j used |
---|
2233 | instead of cartesian (x,y) coordinate to check for transfer because |
---|
2234 | this failed under very rare conditions, calculation of number of |
---|
2235 | particles with same radius as the current particle (cloud droplet code).<br><br>Allocation |
---|
2236 | of <span style="font-family: monospace;">tail_mask</span> |
---|
2237 | and <span style="font-family: monospace;">new_tail_id</span> |
---|
2238 | in case of restart-runs. "__" added in a cpp-directive. (both <span style="font-family: monospace;">init_particles</span>)</td><td style="vertical-align: top;">advec_particles, init_particles</td></tr><tr><td style="vertical-align: top;">02/03/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.1c</td><td style="vertical-align: top;">N</td><td style="vertical-align: top;">A heatflux can be prescribed at |
---|
2239 | the top with new inipar parameters <span style="font-family: monospace;">top_heatflux</span> |
---|
2240 | and <span style="font-family: monospace;">use_top_fluxes</span>. |
---|
2241 | New 2d-arrays <span style="font-family: monospace;">qswst</span>, |
---|
2242 | <span style="font-family: monospace;">qswst_m</span>, |
---|
2243 | <span style="font-family: monospace;">tswst</span> |
---|
2244 | and <span style="font-family: monospace;">tswst_m</span> |
---|
2245 | are used to store this flux. Use of fluxes are controlled with new |
---|
2246 | index variable <span style="font-family: monospace;">nzt_diff</span>. |
---|
2247 | A Neumann boundary condition for temperature can be applied under these |
---|
2248 | conditions.<br><br>Additionally, a Dirichlet condition for |
---|
2249 | temperature can be used at the top.<br><br><span style="font-weight: bold;">Attention:</span> <br> |
---|
2250 | The content of the testresult-file (run control output) has changed |
---|
2251 | due to this modification.</td><td style="vertical-align: top;">check_parameters, |
---|
2252 | diffusion_s, flow_statistics, header, init_grid, init_3d_model, |
---|
2253 | modules, parin, production_e, prognostic_equations, read_var_list, |
---|
2254 | read_3d_binary, swap_timelevel, write_var_list, write_3d_binary</td></tr><tr><td> </td><td> </td><td> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">Prognostic equations for all |
---|
2255 | scalars are now solved up to gridpoint nzt (formerly nzt-1). |
---|
2256 | Boundary conditions for scalars at top adjusted respectively (now |
---|
2257 | applied only at nzt+1).<br><br>The |
---|
2258 | default top boundary condition for temperature has been renamed to <span style="font-style: italic;">'initial_gradient'</span>.<br><br>Calls |
---|
2259 | of dvrp_output_local, |
---|
2260 | which were commented out for a long time, are now activated for all |
---|
2261 | streams.</td><td style="vertical-align: top;">advec_s_pw, |
---|
2262 | boundary_conds, calc_precipitation, check_parameters, diffusion_e, |
---|
2263 | diffusion_s, impact_of_latent_heat, init_dvrp, init_pt_anomaly, |
---|
2264 | modules, production_e, prognostic_equations, spline_z</td></tr><tr><td> </td><td> </td><td> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Bugfix: 3d-array p is not a |
---|
2265 | pointer any more.<br><br>Bugfix in init_particles: |
---|
2266 | MPI_REAL |
---|
2267 | argument in MPI_ALLREDUCE |
---|
2268 | replaced by<br>MPI_INTEGER |
---|
2269 | (caused error on NEC only).<br><br>Bugfix: ddzw now |
---|
2270 | dimensioned 1:nzt"+1".</td><td style="vertical-align: top;">diffusion_e, diffusion_s, |
---|
2271 | diffusion_u, diffusion_v, diffusion_w, init_particles, modules</td></tr><tr><td style="vertical-align: top;">29/03/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.2</td><td style="vertical-align: top;">N</td><td style="vertical-align: top;">The code, including scripts, utility programs and documentation is now under full control of <span style="font-family: Courier New,Courier,monospace;">subversion</span>. This revision includes a quite large number of new features, changes and bugfixes.<br> <br>Particle reflection from vertical walls implemented. The particle SGS model is also adjusted to these vertical walls.<br><br>Wall functions for vertical walls now include diabatic conditions. New subroutines <span style="font-family: Courier New,Courier,monospace;">wall_fluxes</span>, <span style="font-family: Courier New,Courier,monospace;">wall_fluxes_e</span>. New 4D-array <span style="font-family: Courier New,Courier,monospace;">rif_wall</span>.<br><br>Calculation/output of precipitation amount, precipitation rate and z0 (by setting "<span style="font-style: italic;">pra*</span>", "<span style="font-style: italic;">prr*</span>", "<span style="font-style: italic;">z0*</span>" with <span style="font-family: Courier New,Courier,monospace;">data_output</span>). The time interval on which the precipitation amount is defined is set by new d3par-parameter <span style="font-family: Courier New,Courier,monospace;">precipitation_amount_interval</span>.<br><br>New inipar-parameter <span style="font-family: Courier New,Courier,monospace;">loop_optimization</span> to control the loop optimization method.<br><br>New |
---|
2272 | inipar-parameter <span style="font-family: Courier New,Courier,monospace;">pt_reference</span>. If given, this value is used as the |
---|
2273 | reference that is used in the buoyancy terms (otherwise, the instantaneous |
---|
2274 | horizontally averaged temperature is used).<br><br>New d3par-parameter <span style="font-family: Courier New,Courier,monospace;">netcdf_64bit_3d</span> |
---|
2275 | to switch on and especially to switch off 64bit offset for 3D |
---|
2276 | files only (because still some pd-software is unable to handle 64bit |
---|
2277 | offset).<br><br>New d3par-parameter <span style="font-family: Courier New,Courier,monospace;">dt_max</span> to set the maximum value allowed for the timestep. <br><br>New user interfaces <span style="font-family: Courier New,Courier,monospace;">user_advec_particles</span> and <span style="font-family: Courier New,Courier,monospace;">user_init_3d_model</span>. The new initializing action "<span style="font-style: italic;">by_user</span>" calls <span style="font-family: Courier New,Courier,monospace;">user_init_3d_model</span> and allows the initial setting of all 3d arrays under complete user control.<br><br>Samples added to the user interface which show how to add user-define time series quantities.<br><br>Topography height informations are stored on arrays <span style="font-family: Courier New,Courier,monospace;">zu_s_inner</span> and <span style="font-family: Courier New,Courier,monospace;">zw_w_inner</span> and output to the 2d/3d NetCDF files.<br><br>Unit 9 is generally opened for output of debug informations (file <span style="font-family: Courier New,Courier,monospace;">DEBUG_<pe#></span>).</td><td style="vertical-align: top;">Makefile<br><br>advec_particles, |
---|
2278 | average_3d_data, buoyancy, calc_precipitation, check_open, |
---|
2279 | check_parameters, data_output_2d, diffusion_e, diffusion_u, |
---|
2280 | diffusion_v, diffusion_w, diffusivities, header, impact_of_latent_heat, |
---|
2281 | init_particles, init_3d_model, modules, netcdf, parin, production_e, |
---|
2282 | read_var_list, read_3d_binary, sum_up_3d_data, user_interface, |
---|
2283 | write_var_list, write_3d_binary<br><br><span style="font-weight: bold;">new:</span><br>wall_fluxes<br></td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">General revision of non-cyclic horizontal boundary conditions:<br>Radiation boundary conditions are now used instead of Neumann conditions at the outflow (calculation needs velocity values for <span style="font-family: Courier New,Courier,monospace;">t-dt</span>, which are stored on new arrays <span style="font-family: Courier New,Courier,monospace;">u_m_l</span>, <span style="font-family: Courier New,Courier,monospace;">u_m_r</span>, etc.). The calculation of a mean outflow is not needed any more. Volume flow control is added for the outflow boundary (<span style="font-weight: bold;">currently only for the north boundary!!</span>). Additional gridpoints along x and y (<span style="font-family: Courier New,Courier,monospace;">uxrp</span>, <span style="font-family: Courier New,Courier,monospace;">vynp</span>) are not needed any more and removed from the code. Routine "<span style="font-family: Courier New,Courier,monospace;">boundary_conds</span>" now operates on timelevel <span style="font-family: Courier New,Courier,monospace;">t+dt</span> and is not split in two parts (<span style="font-style: italic;">main</span>, <span style="font-style: italic;">uvw_outflow</span>) any more. Neumann boundary conditions are used at inflow/outflow in case of non-cyclic boundary conditions <span style="font-weight: bold;">for all 2d-arrays</span> that are handled by <span style="font-family: Courier New,Courier,monospace;">exchange_horiz_2d</span>.<br><span style="font-weight: bold;">Attention: the |
---|
2284 | non-cyclic boundary conditions of this revision still contain some bugs |
---|
2285 | which will be removed within the next revisions!</span><br><br>The Bott-Chlond-scheme can now be used in the vectorization-optimized part (NEC, etc.). Equations are solved up to gridpoint <span style="font-family: Courier New,Courier,monospace;">nzt</span>.<br><br>The |
---|
2286 | FFT-method for solving the Poisson-equation is now working with Neumann |
---|
2287 | boundary conditions both at the bottom and the top. This requires |
---|
2288 | adjustments of the tridiagonal coefficients and subtracting the |
---|
2289 | horizontally averaged mean from the vertical velocity field.<br><br>Particles-package is now part of the default code ("<span style="font-family: Courier New,Courier,monospace;">-p particles</span>" is not needed as an <span style="font-weight: bold;">mrun</span>-option any more). New attribute <span style="font-family: Courier New,Courier,monospace;">age_m</span> in <span style="font-family: Courier New,Courier,monospace;">particle_type</span>.<br><br>Move call of <span style="font-family: Courier New,Courier,monospace;">user_actions</span>( '<span style="font-style: italic;">after_integration</span>' ) below the increments of times<br>and counters. <span style="font-family: Courier New,Courier,monospace;">user_actions</span> is now called for each statistic region and has as an argument the number of the respective region (<span style="font-family: Courier New,Courier,monospace;">sr</span>).<br><br>d3par-parameter <span style="font-family: Courier New,Courier,monospace;">data_output_ts</span> is removed. Timeseries output for <span style="font-weight: bold;">profil</span>-software removed. Timeseries are now switched on by setting <span style="font-family: Courier New,Courier,monospace;">dt_dots</span>. Timeseries data is collected in <span style="font-family: Courier New,Courier,monospace;">flow_statistics</span>.<br><br>Initial velocities at <span style="font-family: Courier New,Courier,monospace;">nzb+1</span> |
---|
2290 | are regarded for volume flow control in case they have been set zero |
---|
2291 | before (to avoid small timesteps); see new internal parameters <span style="font-family: Courier New,Courier,monospace;">u/v_nzb_p1_for_vfc</span>.<br><br><span style="font-family: Courier New,Courier,monospace;">q</span> is not allowed any more to become negative (<span style="font-family: Courier New,Courier,monospace;">prognostic_equations</span>).<br><br><span style="font-family: Courier New,Courier,monospace;">poisfft_init</span> is only called if the fft-solver is switched on (<span style="font-family: Courier New,Courier,monospace;">init_pegrid</span>).<br><br>d3par-parameter <span style="font-family: Courier New,Courier,monospace;">moisture</span> renamed to <span style="font-family: Courier New,Courier,monospace;">humidity</span>.<br><br>Subversion global revision number is read from <span style="font-weight: bold;">mrun</span> and added to the run description header and to the run control (<span style="font-family: Courier New,Courier,monospace;">_rc</span>) file.<br><br><span style="font-family: Courier New,Courier,monospace;">__vtk</span> directives removed from main program.<br><br>The uitility routine <span style="font-family: Courier New,Courier,monospace;">interpret_config</span> now reads PALM environment variables from <span style="font-family: Courier New,Courier,monospace;">NAMELIST</span> instead using the system call <span style="font-family: Courier New,Courier,monospace;">GETENV</span>.</td><td style="vertical-align: top;">advec_s_bc, advec_u_pw, |
---|
2292 | advec_u_up, advec_v_pw, advec_v_up, asselin_filter, boundary_conds, check_parameters, |
---|
2293 | coriolis, data_output_dvrp, data_output_ptseries, data_output_ts, |
---|
2294 | data_output_2d, data_output_3d, diffusion_u, diffusion_v, |
---|
2295 | disturb_field, exchange_horiz, exchange_horiz_2d, flow_statistics, header, init_grid, |
---|
2296 | init_particles, init_pegrid, init_rankine, init_pt_anomaly, |
---|
2297 | init_1d_model, init_3d_model, modules, palm, package_parin, parin, |
---|
2298 | poisfft, poismg, prandtl_fluxes, pres, production_e, |
---|
2299 | prognostic_equations, read_var_list, read_3d_binary, sor, |
---|
2300 | swap_timelevel, time_integration, write_var_list, write_3d_binary</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Bugfix: preset of tendencies <span style="font-family: Courier New,Courier,monospace;">te_em</span>, <span style="font-family: Courier New,Courier,monospace;">te_um</span>, and <span style="font-family: Courier New,Courier,monospace;">te_vm</span> (<span style="font-family: Courier New,Courier,monospace;">init_1d_model</span>).<br><br>Bugfix in sample for reading user defined data from restart file (<span style="font-family: Courier New,Courier,monospace;">user_init</span>).<br><br>Bugfix in setting diffusivities for cases with the outflow damping layer extending over more than one subdomain (<span style="font-family: Courier New,Courier,monospace;">init_3d_model</span>).<br><br>Check for possible negative humidities in the initial humidity profile.<br><br>In <span style="font-family: Courier New,Courier,monospace;">Makefile</span>, default suffixes are removed from the suffix list to avoid calling of <span style="font-family: Courier New,Courier,monospace;">m2c</span> in cases of existing <span style="font-family: Courier New,Courier,monospace;">.mod</span> files (problem on Linux systems).</td><td style="vertical-align: top;">Makefile<br><br>check_parameters, init_1d_model, init_3d_model, user_interface</td></tr><tr><td style="vertical-align: top;">19/04/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.2a</td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">All system relevant compile and link options (e.g. cpp-directives, |
---|
2301 | library paths, etc.) as well as the host identifier (local_host) are |
---|
2302 | now specified in the configuration file. This generally allows to install |
---|
2303 | PALM on any kind of Linux-, IBM-AIX-, or NEC-SX-system by adding |
---|
2304 | appropriate |
---|
2305 | settings to the configuration file. A description is added to chapter |
---|
2306 | 5.0 of the online documentation.<br><br>Scripts are also running under the public domain ksh.<br><br>Filetransfer by ftp removed (options<span style="font-family: Courier New,Courier,monospace;"> -f </span>removed from <span style="font-weight: bold;">mrun</span> and <span style="font-weight: bold;">mbuild</span>).<br><br>Call of (system-)FLUSH routine moved to new routine<span style="font-family: Courier New,Courier,monospace;"> local_flush</span>.<br><br><span style="font-family: Courier New,Courier,monospace;">return_addres </span>and<span style="font-family: Courier New,Courier,monospace;"> return_username </span>are read from ENVPAR-NAMELIST-file instead of using<span style="font-family: Courier New,Courier,monospace;"> local_getenv</span>.<br><br>Preprocessor strings for different linux clusters changed to "<span style="font-family: Courier New,Courier,monospace;">lc</span>", some preprocessor directives renamed (new:<span style="font-family: Courier New,Courier,monospace;"> __intel_openmp_bug</span> which is used for the bug in<span style="font-family: Courier New,Courier,monospace;"> tridia_1dd </span>and the OpenMP directives). Preprocessor directives for old systems have been removed.<br><br></td><td style="vertical-align: top;">advec_particles, |
---|
2307 | check_open, cpu_log, cpu_statistics, data_output_dvrp, flow_statistics, |
---|
2308 | header, init_dvrp, init_particles, init_1d_model, init_dvrp, |
---|
2309 | init_pegrid, local_getenv, local_system, local_tremain, |
---|
2310 | local_tremain_ini, modules, palm, parin, run_control<br><br><span style="font-weight: bold;">new:</span><br>local_flush<br><br><span style="font-weight: bold;">changed scripts:</span><br>mbuild, mrun, .mrun.config.default<br></td></tr><tr><td style="vertical-align: top;">30/05/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.2b</td><td style="vertical-align: top;">N</td><td style="vertical-align: top;">Calculation and output of user-defined profiles: New userpar-parameter <span style="font-family: Courier New,Courier,monospace;">data_output_pr_user</span>. In the user-interface, routine <span style="font-family: Courier New,Courier,monospace;">user_check_data_output_pr</span> has been added and <span style="font-family: Courier New,Courier,monospace;">user_statistics</span> has been extended.<br></td><td style="vertical-align: top;">check_parameters, flow_statistics, modules, parin, read_var_list, user_interface, write_var_list</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">In <span style="font-family: Courier New,Courier,monospace;">pres.f90</span>, division through <span style="font-family: Courier New,Courier,monospace;">dt_3d</span> |
---|
2311 | replaced by multiplication of the inverse. For performance |
---|
2312 | optimisation, this is done in the loop calculating the divergence |
---|
2313 | instead of using a seperate loop.<br><br>Variables <span style="font-family: Courier New,Courier,monospace;">var_hom</span> and <span style="font-family: Courier New,Courier,monospace;">var_sum</span> are both renamed <span style="font-family: Courier New,Courier,monospace;">pr_palm</span>.</td><td style="vertical-align: top;">data_output_profiles, flow_statistics, init_3d_model, modules, parin, pres, read_var_list, run_control, time_integration</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Bugfix: <span style="font-family: Courier New,Courier,monospace;">work_fft*_vec</span> removed from some PRIVATE-declarations (<span style="font-family: Courier New,Courier,monospace;">poisfft</span>).<br><br>Bugfix: <span style="font-family: Courier New,Courier,monospace;">field_chr</span> renamed <span style="font-family: Courier New,Courier,monospace;">field_char</span> (<span style="font-family: Courier New,Courier,monospace;">user_interface</span>).<br><br>Bugfix: output of <span style="font-family: Courier New,Courier,monospace;">use_upstream_for_tke</span> (<span style="font-family: Courier New,Courier,monospace;">header</span>).</td><td style="vertical-align: top;">header, poisfft, user_interface</td></tr><tr><td style="vertical-align: top;">21/06/07</td><td style="vertical-align: top;">SR</td><td style="vertical-align: top;">3.3</td><td style="vertical-align: top;">N</td><td style="vertical-align: top;">This version allows runs for the ocean. These runs can be switched on with the new inipar-parameter <span style="font-family: Courier New,Courier,monospace;">ocean</span>.<br><br>Setting this switch has several effects:<br><ul><li>An additional prognostic equation for salinity is solved.</li><li>Potential temperature in buoyancy and stability-related terms is replaced by potential density.</li><li>Potential |
---|
2314 | density is calculated from the equation of state for seawater after |
---|
2315 | each timestep, using the algorithm proposed by Jackett et al. (2006, J. |
---|
2316 | Atmos. Oceanic Technol., <span style="font-weight: bold;">23</span>, 1709-1728).<br>So far, only the initial hydrostatic pressure is entered into this equation.</li><li>z=0 (sea surface) is assumed at the model top (vertical grid index <span style="font-family: Courier New,Courier,monospace;">k=nzt</span> on the w-grid), with negative values of z indicating the depth.</li><li>Initial profiles are constructed (e.g. from <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#pt_vertical_gradient">pt_vertical_gradient</a> / <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#pt_vertical_gradient_level">pt_vertical_gradient_level</a>) starting from the sea surface, using surface values given by <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#pt_surface">pt_surface</a>, <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#sa_surface">sa_surface</a>, <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#ug_surface">ug_surface</a>, and <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/doc/app/chapter_4.1.html#vg_surface">vg_surface</a>.</li><li>Zero salinity flux is used as default boundary condition at the bottom of the sea.</li><li>If switched on, random perturbations are by default imposed to the upper model domain from zu(nzt*2/3) to zu(nzt-3).</li></ul>Relevant new inipar-parameters to be exclusively used for steering ocean runs are <span style="font-family: Courier New,Courier,monospace;">bc_sa_t</span>, <span style="font-family: Courier New,Courier,monospace;">bottom_salinityflux</span>, <span style="font-family: Courier New,Courier,monospace;">sa_surface</span>, <span style="font-family: Courier New,Courier,monospace;">sa_vertical_gradient</span>, <span style="font-family: Courier New,Courier,monospace;">sa_vertical_gradient_level</span>, and <span style="font-family: Courier New,Courier,monospace;">top_salinityflux</span>.<br><br>Salinity (<span style="font-family: Courier New,Courier,monospace;">sa</span>) and potential density (<span style="font-family: Courier New,Courier,monospace;">rho</span>) are included as new 2d/3d output quantities. Vertical profiles of salinity (<span style="font-family: Courier New,Courier,monospace;">sa</span>), salinity fluxes (<span style="font-family: Courier New,Courier,monospace;">w"sa"</span>, <span style="font-family: Courier New,Courier,monospace;">w*sa*</span>, <span style="font-family: Courier New,Courier,monospace;">wsa</span>), and potential density (<span style="font-family: Courier New,Courier,monospace;">rho</span>) can also be output.<span style="font-family: Courier New,Courier,monospace;"></span></td><td style="vertical-align: top;">advec_s_bc, average_3d_data,<br>boundary_conds, buoyancy,<br>check_parameters, data_output_2d,<br>data_output_3d, diffusion_e,<br>diffusivities, flow_statistics, header,<br>init_grid, init_3d_model, modules,<br>netcdf, parin, production_e,<br>prognostic_equations,<br>read_3d_binary, read_var_list,<br>sum_up_3d_data, swap_timelevel,<br>time_integration, user_interface,<br>write_var_list, write_3d_binary<br><br><span style="font-weight: bold;">new:</span><br>eqn_state_seawater, init_ocean</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">C</td><td style="vertical-align: top;">Inipar-parameter <span style="font-family: Courier New,Courier,monospace;">use_pt_reference</span> renamed <span style="font-family: Courier New,Courier,monospace;">use_reference.</span><br>Internal variable <span style="font-family: Courier New,Courier,monospace;">hydro_press</span> renamed <span style="font-family: Courier New,Courier,monospace;">hyp</span>, routine <span style="font-family: Courier New,Courier,monospace;">calc_mean_pt_profile</span> renamed <span style="font-family: Courier New,Courier,monospace;">calc_mean_profile</span>.<br><br>The format of the <span style="font-family: Courier New,Courier,monospace;">RUN_CONTROL</span> file has been adjusted for ocean runs.<br><br>Defaults of <span style="font-family: Courier New,Courier,monospace;">.._vertical_gradient_levels</span> changed from <span style="font-style: italic;">-1.0</span> to <span style="font-style: italic;">-9999999.9</span>.</td><td style="vertical-align: top;">advec_particles, buoyancy, <br>calc_liquid_water_content, <br>check_parameters, diffusion_e,<br>diffusivities, header,<br>init_cloud_physics, modules,<br>production_e, prognostic_equations,<br>run_control</td></tr><tr><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;"> </td><td style="vertical-align: top;">E</td><td style="vertical-align: top;">Bugfix: height above topography instead of height above level k=0 is used for calculating the mixing length (<span style="font-family: Courier New,Courier,monospace;">diffusion_e</span> and <span style="font-family: Courier New,Courier,monospace;">diffusivities</span>).<br><br>Bugfix: error in boundary condition for TKE removed (<span style="font-family: Courier New,Courier,monospace;">advec_s_bc</span>).</td><td style="vertical-align: top;">advec_s_bc, diffusion_e, diffusivities</td></tr> |
---|
2317 | </tbody> |
---|
2318 | </table> <b><blink>Attention:</blink></b> |
---|
2319 | If<tt> make </tt>is not used |
---|
2320 | for |
---|
2321 | compiling, |
---|
2322 | <b>all routines</b> have to be re-compiled after every |
---|
2323 | change |
---|
2324 | to <b>modules.f90!</b> |
---|
2325 | <br> |
---|
2326 | <br> |
---|
2327 | <h2><a name="Kapitel2.0"></a>2.0 How |
---|
2328 | to change the model source |
---|
2329 | code</h2> |
---|
2330 | Änderungen, Erweiterungen oder Fehlerkorrekturen am Modellcode |
---|
2331 | (gemeint |
---|
2332 | sind alle Modellteile, die nicht zur benutzereigenen Software |
---|
2333 | gehören) |
---|
2334 | erfordern vom jeweiligen Benutzer Gruppenzugehörigkeit zur |
---|
2335 | Gruppe |
---|
2336 | <tt>"palm"</tt>. |
---|
2337 | Zu dieser Gruppe gehören alle Benutzer, die aktiv an der |
---|
2338 | Modellentwicklung |
---|
2339 | mitwirken (im weiteren "Modellarbeitsgruppe" genannt). |
---|
2340 | <p>Die einzelnen Quelltextdateien des Modells werden mit RCS |
---|
2341 | (Revision |
---|
2342 | Control System) verwaltet. Grundlegende Kenntnisse über dieses |
---|
2343 | System |
---|
2344 | werden im weiteren vorausgesetzt. |
---|
2345 | </p><p>Änderungen am Modellcode erfordern die |
---|
2346 | Durchführung |
---|
2347 | bestimmter |
---|
2348 | Aktionen in einer festgelegten Reihenfolge, die nun beschrieben werden |
---|
2349 | sollen. |
---|
2350 | </p><ol> <li>Konzeptplanung.</li> <li>Diskussion |
---|
2351 | der geplanten Änderungen in der |
---|
2352 | Modellarbeitsgruppe.</li> <li>Auschecken der |
---|
2353 | benötigten Quelltextdateien, |
---|
2354 | Durchführung der |
---|
2355 | Änderungen und Test des Modells. Die Modul-Datei <tt>modules.f90</tt> |
---|
2356 | sollte nur dann ausgecheckt werden, wenn dort aufgeführte |
---|
2357 | Variablen |
---|
2358 | verändert werden. Neu geschaffene Variablen sollten |
---|
2359 | während |
---|
2360 | der |
---|
2361 | Testphase in ein ebenfalls temporär neu zu schaffendes Modul |
---|
2362 | geschrieben |
---|
2363 | werden, das von den jeweiligen Programmteilen benutzt werden muss |
---|
2364 | (Einfügen |
---|
2365 | entsprechender USE-Anweisungen). Die in den einzelnen Dateien |
---|
2366 | durchgeführten |
---|
2367 | Arbeiten müssen in den Kopfzeilen (unter "Aktuelle |
---|
2368 | Aenderungen") |
---|
2369 | der |
---|
2370 | Dateien vermerkt werden. Dies tut man am besten noch <b>bevor</b> |
---|
2371 | man |
---|
2372 | die |
---|
2373 | eigentlichen Änderungen durchführt (sonst droht das |
---|
2374 | Vergessen...).</li> <li>Zum Abschluß der Tests |
---|
2375 | sollte mit dem Modell eine |
---|
2376 | Kontrollrechnung |
---|
2377 | durchgeführt und die Ergebnisse mit denen des sogenannten |
---|
2378 | Standardlaufes |
---|
2379 | verglichen werden. Diese Rechnung ist mit der <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/INSTALL/.mrun.config">Konfigurationsdatei</a> |
---|
2380 | und der <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/INSTALL/example_p3d">Parameterdatei</a> |
---|
2381 | durchzuführen, die auch zum Testen der Modellinstallation |
---|
2382 | verwendet |
---|
2383 | werden (s. <a href="Anwendung/Kapitel_5.0.html">Kapitel |
---|
2384 | 5.0</a> der |
---|
2385 | Anwenderdokumentation). |
---|
2386 | Die Ergebnisdatei mit dem lokalen Namen <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM-1/Dokumentationen/Anwendung/Kapitel_3.4.html#RUN_CONTROL">RUN_CONTROL</a> |
---|
2387 | ist dann mit der <a href="http://www.muk.uni-hannover.de/%7Eraasch/PALM_group/INSTALL/example_rc">Beispiel-Ergebnisdatei</a> |
---|
2388 | zu vergleichen (Hinweis: Kopien der Konfigurationsdatei, Parameterdatei |
---|
2389 | und Beispiel-Ergebnisdatei erhält man durch anklicken der |
---|
2390 | entsprechenden |
---|
2391 | Links mit der linken Maustaste bei gleichzeitig gedrückter |
---|
2392 | <SHIFT>-Taste). |
---|
2393 | Werden Abweichungen zwischen den beiden Ergebnisdateien festgestellt, |
---|
2394 | so |
---|
2395 | ist unbedingt eine Diskussion in der Modellarbeitsgruppe notwendig.</li> |
---|
2396 | <li>Nach Durchführung der Tests müssen bei |
---|
2397 | Bedarf die |
---|
2398 | vorläufig |
---|
2399 | im temporären Modul eingetragenen Variablen in die |
---|
2400 | eigentlichen |
---|
2401 | Module |
---|
2402 | des Modells übertragen werden. Dazu ist die Modul-Datei <tt>modules.f90</tt> |
---|
2403 | auszuchecken. Nach Eintrag der Variablen sollte das Modell noch einmal |
---|
2404 | testweise übersetzt werden, um Sytaxfehler |
---|
2405 | auszuschließen |
---|
2406 | (evtl. |
---|
2407 | auch noch einmal einen Probelauf starten). Die Verwendung des |
---|
2408 | temporären |
---|
2409 | Moduls ist aus allen entsprechenden Programmteilen zu entfernen.</li> |
---|
2410 | <li>Vergabe einer neuen Versionsnummer (Variable <tt>version</tt> |
---|
2411 | im |
---|
2412 | Modul <tt>steuer</tt>), |
---|
2413 | Bsp.: 2.3c. Kleinere Änderungen werden durch |
---|
2414 | angehängten |
---|
2415 | kleinen |
---|
2416 | Buchstaben kenntlich gemacht, größere |
---|
2417 | Änderungen durch |
---|
2418 | die Zahl hinter dem Punkt. Eine Inkrementierung der Zahl vor dem Punkt |
---|
2419 | geschieht nur bei ganz grundsätzlichen Revisionen des Modells, |
---|
2420 | die |
---|
2421 | weite Teile des Modellcodes betreffen.</li> <li>Nun |
---|
2422 | können die ausgecheckten Dateien wieder eingecheckt |
---|
2423 | werden. |
---|
2424 | Vor |
---|
2425 | dem Einchecken sind in den Dateien die Vermerke unter "Aktuelle |
---|
2426 | Aenderungen" |
---|
2427 | zu entfernen und beim check-in - Kommando als Log-Text anzugeben. Sie |
---|
2428 | erscheinen |
---|
2429 | dann in der jeweiligen Datei unter "Fruehere Aenderungen" zusammen mit |
---|
2430 | der vom RCS-System vergebenen Versionsnummer (dafür sorgt die |
---|
2431 | $Log: |
---|
2432 | ... $ - Zeile, die in jeder Quelltextdatei steht).</li> <li>Eine |
---|
2433 | Zusammenfassung der durchgeführten Arbeiten ist im <a href="#Kapitel1.0">Kapitel |
---|
2434 | 1.0</a> einzutragen.</li> <li>Die |
---|
2435 | Modellarbeitsgruppe ist über den Abschluß der |
---|
2436 | durchgeführten |
---|
2437 | Arbeiten zu informieren.</li> |
---|
2438 | </ol><h2> |
---|
2439 | <a name="Kapitel3.0"></a>3.0 Description |
---|
2440 | of selected parts of the |
---|
2441 | model source code</h2> |
---|
2442 | <b>This chapter is still under construction (Feb. 04).</b> |
---|
2443 | <p>Dieser Abschnitt verweist auf vorhandene Beschreibungen der |
---|
2444 | genauen |
---|
2445 | Funktionsweise einzelner, spezieller Modellteile. Dazu gehört |
---|
2446 | z.B. |
---|
2447 | die Beschreibung bestimmter numerischer Verfahren (auch ihr |
---|
2448 | theoretischer |
---|
2449 | Hintergrund), die Erklärung besonderer Prinzipien bei der |
---|
2450 | Parallelisierung |
---|
2451 | oder Erläuterungen zur Vorgehensweise bei der Lösung |
---|
2452 | bestimmter |
---|
2453 | Aufgaben (z.B. der Berechnung horizontal gemittelter |
---|
2454 | Größen). |
---|
2455 | <br>Die Beschreibungen liegen in jeweils getrennten Dokumenten, |
---|
2456 | in der |
---|
2457 | Regel als TeX- und/oder Postscript-Datei vor und sind über die |
---|
2458 | folgenden |
---|
2459 | Links zugänglich. |
---|
2460 | <br> |
---|
2461 | </p><ul> <li> <a name="UPS"></a>upstream-spline |
---|
2462 | advection scheme ( <a href="Upstream_Spline/ups.ps">.ps</a> |
---|
2463 | )</li> <li> <a name="Cloud_physics"></a>cloud |
---|
2464 | physics module ( <a href="Cloud_physics/wolken.pdf">.pdf</a> |
---|
2465 | )</li> <li> <a name="Bitkompression"></a>Datenkompression |
---|
2466 | mit dem Verfahren |
---|
2467 | der <a href="Bitkompression/kompression.html">Bitverschiebung</a></li> |
---|
2468 | <li> <a name="Runge-kutta"></a>Runge-Kutta |
---|
2469 | time integration scheme ( <a href="numerik.heiko/zeitschrittverfahren.pdf">.pdf</a> |
---|
2470 | )</li> |
---|
2471 | </ul><br> |
---|
2472 | |
---|
2473 | <br> |
---|
2474 | <br> |
---|
2475 | <br> |
---|
2476 | <br> |
---|
2477 | <br> |
---|
2478 | <br> |
---|
2479 | <br> |
---|
2480 | </body></html> |
---|